NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome Family F065585

Metagenome Family F065585

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F065585
Family Type Metagenome
Number of Sequences 127
Average Sequence Length 81 residues
Representative Sequence SPVLSLGAGAYRLKSGDNGQTVYHTNLFWSGGVGADVVVTPSVIVELRVERQWMRDANQGHVATLWPVAAGVRVAL
Number of Associated Samples 97
Number of Associated Scaffolds 127

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 1.69 %
% of genes near scaffold ends (potentially truncated) 91.34 %
% of genes from short scaffolds (< 2000 bps) 84.25 %
Associated GOLD sequencing projects 88
AlphaFold2 3D model prediction Yes
3D model pTM-score0.69

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Bacteria (92.126 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil
(38.583 % of family members)
Environment Ontology (ENVO) Unclassified
(62.205 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(66.142 % of family members)


 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      

 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 0.00%    β-sheet: 59.62%    Coil/Unstructured: 40.38%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.69
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 127 Family Scaffolds
PF0563523S_rRNA_IVP 29.92
PF13650Asp_protease_2 7.87
PF05685Uma2 7.09
PF01738DLH 3.94
PF00535Glycos_transf_2 2.36
PF00072Response_reg 1.57
PF06537DHOR 1.57
PF05402PqqD 0.79
PF00483NTP_transferase 0.79
PF05016ParE_toxin 0.79
PF09365DUF2461 0.79
PF01797Y1_Tnp 0.79
PF13975gag-asp_proteas 0.79
PF03625DUF302 0.79

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 127 Family Scaffolds
COG4636Endonuclease, Uma2 family (restriction endonuclease fold)General function prediction only [R] 7.09
COG3488Uncharacterized conserved protein with two CxxC motifs, DUF1111 familyGeneral function prediction only [R] 1.57
COG1943REP element-mobilizing transposase RayTMobilome: prophages, transposons [X] 0.79
COG3439Uncharacterized conserved protein, DUF302 familyFunction unknown [S] 0.79

 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms92.13 %
UnclassifiedrootN/A7.87 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300002560|JGI25383J37093_10158095All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium598Open in IMG/M
3300002562|JGI25382J37095_10130247All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium846Open in IMG/M
3300002908|JGI25382J43887_10380089All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium597Open in IMG/M
3300005166|Ga0066674_10017809All Organisms → cellular organisms → Bacteria3036Open in IMG/M
3300005166|Ga0066674_10502949All Organisms → cellular organisms → Bacteria545Open in IMG/M
3300005171|Ga0066677_10307349All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium906Open in IMG/M
3300005172|Ga0066683_10596917All Organisms → cellular organisms → Bacteria669Open in IMG/M
3300005172|Ga0066683_10719503All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium589Open in IMG/M
3300005172|Ga0066683_10774269All Organisms → cellular organisms → Bacteria560Open in IMG/M
3300005175|Ga0066673_10218765All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium1094Open in IMG/M
3300005175|Ga0066673_10465011All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium745Open in IMG/M
3300005178|Ga0066688_10549917All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium742Open in IMG/M
3300005180|Ga0066685_10597627All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium759Open in IMG/M
3300005181|Ga0066678_10353621All Organisms → cellular organisms → Bacteria969Open in IMG/M
3300005181|Ga0066678_10936132All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium565Open in IMG/M
3300005446|Ga0066686_10213088All Organisms → cellular organisms → Bacteria1297Open in IMG/M
3300005454|Ga0066687_10142432All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium1259Open in IMG/M
3300005536|Ga0070697_100247655All Organisms → cellular organisms → Bacteria1523Open in IMG/M
3300005546|Ga0070696_101778637All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium532Open in IMG/M
3300005552|Ga0066701_10283147All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium1027Open in IMG/M
3300005556|Ga0066707_10331569All Organisms → cellular organisms → Bacteria996Open in IMG/M
3300005556|Ga0066707_10787637All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium589Open in IMG/M
3300005556|Ga0066707_10886398All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium547Open in IMG/M
3300005556|Ga0066707_10978411All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium516Open in IMG/M
3300005557|Ga0066704_10408053All Organisms → cellular organisms → Bacteria901Open in IMG/M
3300005558|Ga0066698_10336696All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium1044Open in IMG/M
3300005559|Ga0066700_10962547All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium563Open in IMG/M
3300005560|Ga0066670_10295419All Organisms → cellular organisms → Bacteria985Open in IMG/M
3300005575|Ga0066702_10493923All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium746Open in IMG/M
3300005598|Ga0066706_10427807All Organisms → cellular organisms → Bacteria1054Open in IMG/M
3300005598|Ga0066706_11358099All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium536Open in IMG/M
3300006031|Ga0066651_10041239All Organisms → cellular organisms → Bacteria2122Open in IMG/M
3300006034|Ga0066656_10083388All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium1912Open in IMG/M
3300006034|Ga0066656_10146178All Organisms → cellular organisms → Bacteria1475Open in IMG/M
3300006046|Ga0066652_100770932All Organisms → cellular organisms → Bacteria918Open in IMG/M
3300006796|Ga0066665_11171382All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium586Open in IMG/M
3300006797|Ga0066659_10379390All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium1106Open in IMG/M
3300006797|Ga0066659_10783322All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium787Open in IMG/M
3300006797|Ga0066659_10855867All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium757Open in IMG/M
3300006854|Ga0075425_100835670All Organisms → cellular organisms → Bacteria1054Open in IMG/M
3300006854|Ga0075425_101809537All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium685Open in IMG/M
3300006903|Ga0075426_10114610All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium1935Open in IMG/M
3300007076|Ga0075435_100084257All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium2615Open in IMG/M
3300007076|Ga0075435_101725235All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium549Open in IMG/M
3300007255|Ga0099791_10201885All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium937Open in IMG/M
3300009012|Ga0066710_100862922All Organisms → cellular organisms → Bacteria1391Open in IMG/M
3300009090|Ga0099827_11167945All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium669Open in IMG/M
3300009137|Ga0066709_100798093All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium1367Open in IMG/M
3300009137|Ga0066709_102430724All Organisms → cellular organisms → Bacteria710Open in IMG/M
3300009137|Ga0066709_103621704All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium560Open in IMG/M
3300010304|Ga0134088_10519430All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium588Open in IMG/M
3300010320|Ga0134109_10041708All Organisms → cellular organisms → Bacteria1495Open in IMG/M
3300010321|Ga0134067_10051468All Organisms → cellular organisms → Bacteria1327Open in IMG/M
3300010322|Ga0134084_10178815All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium730Open in IMG/M
3300010326|Ga0134065_10191642All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium736Open in IMG/M
3300010329|Ga0134111_10541360All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium515Open in IMG/M
3300010333|Ga0134080_10263047All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium764Open in IMG/M
3300010337|Ga0134062_10154308All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium1023Open in IMG/M
3300010364|Ga0134066_10332123All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium557Open in IMG/M
3300010396|Ga0134126_10584626All Organisms → cellular organisms → Bacteria1279Open in IMG/M
3300011269|Ga0137392_10086476All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium2443Open in IMG/M
3300011271|Ga0137393_10816899All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium797Open in IMG/M
3300012096|Ga0137389_10103028All Organisms → cellular organisms → Bacteria2271Open in IMG/M
3300012096|Ga0137389_10201567All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium1657Open in IMG/M
3300012198|Ga0137364_10705535All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium761Open in IMG/M
3300012198|Ga0137364_11440412All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium509Open in IMG/M
3300012199|Ga0137383_10056234All Organisms → cellular organisms → Bacteria2819Open in IMG/M
3300012199|Ga0137383_10369826All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium1050Open in IMG/M
3300012200|Ga0137382_10042433All Organisms → cellular organisms → Bacteria2798Open in IMG/M
3300012206|Ga0137380_11422242All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium578Open in IMG/M
3300012207|Ga0137381_10414669All Organisms → cellular organisms → Bacteria1175Open in IMG/M
3300012207|Ga0137381_11535832All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium557Open in IMG/M
3300012208|Ga0137376_11006602All Organisms → cellular organisms → Bacteria714Open in IMG/M
3300012208|Ga0137376_11495801All Organisms → cellular organisms → Bacteria566Open in IMG/M
3300012209|Ga0137379_10179770All Organisms → cellular organisms → Bacteria2028Open in IMG/M
3300012209|Ga0137379_10761224All Organisms → cellular organisms → Bacteria873Open in IMG/M
3300012209|Ga0137379_10904400All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium787Open in IMG/M
3300012210|Ga0137378_11169499All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium685Open in IMG/M
3300012285|Ga0137370_10242250All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium1066Open in IMG/M
3300012349|Ga0137387_10137853All Organisms → cellular organisms → Bacteria1730Open in IMG/M
3300012354|Ga0137366_10172221All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium1625Open in IMG/M
3300012357|Ga0137384_10231124Not Available1545Open in IMG/M
3300012357|Ga0137384_10256059All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium1460Open in IMG/M
3300012359|Ga0137385_11489052All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium540Open in IMG/M
3300012923|Ga0137359_10336246All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium1343Open in IMG/M
3300015356|Ga0134073_10249888All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium612Open in IMG/M
3300015359|Ga0134085_10619224All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium504Open in IMG/M
3300017656|Ga0134112_10247766All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium706Open in IMG/M
3300017659|Ga0134083_10238209All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium759Open in IMG/M
3300018431|Ga0066655_10242007All Organisms → cellular organisms → Bacteria1146Open in IMG/M
3300018431|Ga0066655_10429877All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium871Open in IMG/M
3300018433|Ga0066667_10365895All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium1153Open in IMG/M
3300018468|Ga0066662_11332814All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes738Open in IMG/M
3300026295|Ga0209234_1029241All Organisms → cellular organisms → Bacteria2090Open in IMG/M
3300026296|Ga0209235_1217745All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium623Open in IMG/M
3300026298|Ga0209236_1069101All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes1680Open in IMG/M
3300026298|Ga0209236_1216552All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium679Open in IMG/M
3300026301|Ga0209238_1233789All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium543Open in IMG/M
3300026306|Ga0209468_1122082All Organisms → cellular organisms → Bacteria772Open in IMG/M
3300026310|Ga0209239_1358035All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium511Open in IMG/M
3300026322|Ga0209687_1140718All Organisms → cellular organisms → Bacteria776Open in IMG/M
3300026323|Ga0209472_1311193All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium506Open in IMG/M
3300026329|Ga0209375_1191504All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium791Open in IMG/M
3300026331|Ga0209267_1039577All Organisms → cellular organisms → Bacteria2193Open in IMG/M
3300026332|Ga0209803_1356326All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium508Open in IMG/M
3300026343|Ga0209159_1074009All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium1555Open in IMG/M
3300026343|Ga0209159_1123399All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium1086Open in IMG/M
3300026528|Ga0209378_1105869All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium1234Open in IMG/M
3300026529|Ga0209806_1088964All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium1345Open in IMG/M
3300026538|Ga0209056_10670584All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium523Open in IMG/M
3300026540|Ga0209376_1282717All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium675Open in IMG/M
3300026548|Ga0209161_10145353All Organisms → cellular organisms → Bacteria1375Open in IMG/M
3300026548|Ga0209161_10491144All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium542Open in IMG/M
3300026550|Ga0209474_10118459All Organisms → cellular organisms → Bacteria1759Open in IMG/M
3300026557|Ga0179587_10031635All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium2944Open in IMG/M
3300027671|Ga0209588_1043361All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes1453Open in IMG/M
3300027748|Ga0209689_1176117All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium976Open in IMG/M
3300027748|Ga0209689_1229384All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium787Open in IMG/M


 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil38.58%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil24.41%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil13.39%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil10.24%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere4.72%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere3.94%
SoilEnvironmental → Terrestrial → Soil → Loam → Grasslands → Soil2.36%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment0.79%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil0.79%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil0.79%

Visualization
Powered by ApexCharts



Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300002560Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_20cmEnvironmentalOpen in IMG/M
3300002562Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_40cmEnvironmentalOpen in IMG/M
3300002908Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_40cmEnvironmentalOpen in IMG/M
3300005166Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_123EnvironmentalOpen in IMG/M
3300005171Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126EnvironmentalOpen in IMG/M
3300005172Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132EnvironmentalOpen in IMG/M
3300005175Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122EnvironmentalOpen in IMG/M
3300005178Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137EnvironmentalOpen in IMG/M
3300005180Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134EnvironmentalOpen in IMG/M
3300005181Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127EnvironmentalOpen in IMG/M
3300005446Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135EnvironmentalOpen in IMG/M
3300005454Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_136EnvironmentalOpen in IMG/M
3300005468Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaGEnvironmentalOpen in IMG/M
3300005536Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaGEnvironmentalOpen in IMG/M
3300005545Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaGEnvironmentalOpen in IMG/M
3300005546Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaGEnvironmentalOpen in IMG/M
3300005552Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150EnvironmentalOpen in IMG/M
3300005556Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156EnvironmentalOpen in IMG/M
3300005557Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153EnvironmentalOpen in IMG/M
3300005558Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147EnvironmentalOpen in IMG/M
3300005559Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149EnvironmentalOpen in IMG/M
3300005560Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_119EnvironmentalOpen in IMG/M
3300005575Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_151EnvironmentalOpen in IMG/M
3300005586Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140EnvironmentalOpen in IMG/M
3300005598Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155EnvironmentalOpen in IMG/M
3300006031Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Angelo_100EnvironmentalOpen in IMG/M
3300006034Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_105EnvironmentalOpen in IMG/M
3300006046Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101EnvironmentalOpen in IMG/M
3300006796Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114EnvironmentalOpen in IMG/M
3300006797Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108EnvironmentalOpen in IMG/M
3300006854Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4Host-AssociatedOpen in IMG/M
3300006903Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5Host-AssociatedOpen in IMG/M
3300007076Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4Host-AssociatedOpen in IMG/M
3300007255Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1EnvironmentalOpen in IMG/M
3300009012Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159EnvironmentalOpen in IMG/M
3300009090Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaGEnvironmentalOpen in IMG/M
3300009137Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158EnvironmentalOpen in IMG/M
3300010304Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09182015EnvironmentalOpen in IMG/M
3300010320Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_11112015EnvironmentalOpen in IMG/M
3300010321Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09212015EnvironmentalOpen in IMG/M
3300010322Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_2_24_1 metaGEnvironmentalOpen in IMG/M
3300010326Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_2_24_1 metaGEnvironmentalOpen in IMG/M
3300010329Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_11112015EnvironmentalOpen in IMG/M
3300010333Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_2_24_1 metaGEnvironmentalOpen in IMG/M
3300010337Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09082015EnvironmentalOpen in IMG/M
3300010364Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09212015EnvironmentalOpen in IMG/M
3300010396Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2EnvironmentalOpen in IMG/M
3300011269Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaGEnvironmentalOpen in IMG/M
3300011271Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaGEnvironmentalOpen in IMG/M
3300012096Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaGEnvironmentalOpen in IMG/M
3300012198Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaGEnvironmentalOpen in IMG/M
3300012199Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaGEnvironmentalOpen in IMG/M
3300012200Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaGEnvironmentalOpen in IMG/M
3300012206Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaGEnvironmentalOpen in IMG/M
3300012207Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaGEnvironmentalOpen in IMG/M
3300012208Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaGEnvironmentalOpen in IMG/M
3300012209Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaGEnvironmentalOpen in IMG/M
3300012210Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaGEnvironmentalOpen in IMG/M
3300012285Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaGEnvironmentalOpen in IMG/M
3300012349Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaGEnvironmentalOpen in IMG/M
3300012354Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_60_16 metaGEnvironmentalOpen in IMG/M
3300012357Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaGEnvironmentalOpen in IMG/M
3300012359Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaGEnvironmentalOpen in IMG/M
3300012923Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaGEnvironmentalOpen in IMG/M
3300012925Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300015356Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_5_24_1 metaGEnvironmentalOpen in IMG/M
3300015359Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09182015EnvironmentalOpen in IMG/M
3300017656Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_11112015EnvironmentalOpen in IMG/M
3300017659Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_5_24_1 metaGEnvironmentalOpen in IMG/M
3300018071Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_b1EnvironmentalOpen in IMG/M
3300018431Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104EnvironmentalOpen in IMG/M
3300018433Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116EnvironmentalOpen in IMG/M
3300018468Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111EnvironmentalOpen in IMG/M
3300025910Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300026295Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_20cm (SPAdes)EnvironmentalOpen in IMG/M
3300026296Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_20cm (SPAdes)EnvironmentalOpen in IMG/M
3300026298Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_40cm (SPAdes)EnvironmentalOpen in IMG/M
3300026301Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_20cm (SPAdes)EnvironmentalOpen in IMG/M
3300026306Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_102 (SPAdes)EnvironmentalOpen in IMG/M
3300026310Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_2_20cm (SPAdes)EnvironmentalOpen in IMG/M
3300026322Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_136 (SPAdes)EnvironmentalOpen in IMG/M
3300026323Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130 (SPAdes)EnvironmentalOpen in IMG/M
3300026329Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131 (SPAdes)EnvironmentalOpen in IMG/M
3300026331Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137 (SPAdes)EnvironmentalOpen in IMG/M
3300026332Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138 (SPAdes)EnvironmentalOpen in IMG/M
3300026343Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144 (SPAdes)EnvironmentalOpen in IMG/M
3300026528Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156 (SPAdes)EnvironmentalOpen in IMG/M
3300026529Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152 (SPAdes)EnvironmentalOpen in IMG/M
3300026538Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114 (SPAdes)EnvironmentalOpen in IMG/M
3300026540Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134 (SPAdes)EnvironmentalOpen in IMG/M
3300026548Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155 (SPAdes)EnvironmentalOpen in IMG/M
3300026550Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145 (SPAdes)EnvironmentalOpen in IMG/M
3300026557Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungalEnvironmentalOpen in IMG/M
3300027643Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3 (SPAdes)EnvironmentalOpen in IMG/M
3300027671Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 (SPAdes)EnvironmentalOpen in IMG/M
3300027748Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149 (SPAdes)EnvironmentalOpen in IMG/M
3300027787Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter (SPAdes)EnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap


 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
JGI25383J37093_1015809513300002560Grasslands SoilIDCLPVVVTLEVIRAELAVLPGSPVSPVVSLGVGAYHLKSNDNGQAVYHTNAFWSGGVGLDVAVSPRVTVEARVERQWMRDANQGHVATFWPMGAGARIAL*
JGI25382J37095_1013024713300002562Grasslands SoilVPRATVSPVLSLGAGAYRLKSGDNGQTVYHTNVFWSGGIGMDVEVTPSVIVEVRVERQWMRDTNKGHVATLWPVAAGARVGL*
JGI25382J43887_1038008913300002908Grasslands SoilGPVSPVVSLGVGGYRLKSDDNGQTVYHTNAFWAGGVGLDVTASPRVTLEARVERQWMRDTNLGHVATFWPVGVGARLGL*
Ga0066674_1001780913300005166SoilSLRLLEAYGRAELALVPRATVSPVLSLGAGGYRLKSGDNGQTVYHTNAFWSGGIGVDVEVTPSVIVEVRVERQWMRDTNKGHVATLWPLSAGVRVGL*
Ga0066674_1050294923300005166SoilLESGDNGQTVYHTNVFWSGGIGVDVEVTPSVIVEVRVERQWMRDTNKEHVATLWPVAAGVRVGL*
Ga0066677_1030734923300005171SoilGRAEFALVPRGTVSPVLSLGAGAYRLKSGDNGQTVDHTNLFWSGGVGADVVVTASVIVELRVERQWMRDPNQGHGATLWPLSAGVRAGL*
Ga0066683_1059691713300005172SoilVYHTNAFWSGGVGLDVAVSPRVTLEVRAERQWMRDTNVGHVATFWPLGAGVRVAF*
Ga0066683_1071950313300005172SoilPRGTVSPVVSLGAGAYRLKSGDNGQTVDNTNLFWSGGVGADVVVTPSVIVDLRVERQWMRDPNQGHGATLWPLSAGVRAAL*
Ga0066683_1077426913300005172SoilGGYRLKSGDNGQTVDHTNLFWSGGVGADVVVTASVIVELRVERQWMRDKNQGHGATLWPLSAGVRAGL*
Ga0066673_1021876523300005175SoilRGAVSPVLALGGGAYRLKSSDGGQTFYHTNGFWSAGGGVDVAVSPSVRLELRLERHWMRDTNFGHVATLWPLAAGVRAGL*
Ga0066673_1046501113300005175SoilLKSDDNGQTVYHTNAFWSGGVGLDVTVSPRVTLEARVERQWMRDTNLGHVATFWPVGVGARLAL*
Ga0066688_1054991713300005178SoilAGGYRLKSDDNGLTVYHTNAFWSGGVGLDVTVSPRVTLEARVERQWMRDTNQGHVATFWPVGVGARLAL*
Ga0066685_1059762713300005180SoilGATAGSLNADQTTRAVSLQLLEGYGRAELALVPGGTVSPVISLGAGGYRLKSGDNGQTVDHTNLFWSGGVGADVVVTPSVIVELRVERQWMRDVGEGHVATFWPLSAGVRVGL*
Ga0066678_1035362133300005181SoilYRLKSGDNGQTVYHTNLFWSGGVGADVVVTASVIVELRVERQWIRDTNQGHVATFWPLSAGVRVGL*
Ga0066678_1093613213300005181SoilGGGAYRLKSADGGQTFYHTNTFWSGGGGLDVAVSPSVTLELRLERQWMWDANQGHVATLWPLAVGVRAGL*
Ga0066686_1021308813300005446SoilTGGTVSVALLEGYGRAELALLPRGQVSPVVSVSAGAYRLKSDDDGRTVYHTNAFWSGGVGLDIAVSPRVTLEVRAERQWMRDTNVGHVATFWPVGAGARIAL*
Ga0066687_1014243213300005454SoilELSLMPRGAVSPVLALGGGAYRLKSSDGGQTFYHTNGFWSAGGGVDVAVSPSVRLELRLERHWMRDTNFGHVATLWPLAAGVRAGL*
Ga0070707_10218844423300005468Corn, Switchgrass And Miscanthus RhizosphereGYRLKSGDNGRAIYHTNLFWVGGVGLDATVSPTVTAELRIERQWMTDSPAGHVGTLWPVAAGVRVGL*
Ga0070697_10024765513300005536Corn, Switchgrass And Miscanthus RhizosphereEFALVPRGTVSPVLSLGAGGYRLKSGDNGQTVYHTNLFWSGGVGADVVVTPGVIVELRVERQWMRDTNQGHVATFWPLSAGVRAGL*
Ga0070695_10153618113300005545Corn, Switchgrass And Miscanthus RhizospherePVVSLGAGGYRLKSGDDGQTVYHTNLFWSAGGGLDLGLSPTVTAELRFERQWLTDSGVGHVGTLWPLEAGVRLAF*
Ga0070696_10085128723300005546Corn, Switchgrass And Miscanthus RhizosphereGGGGYRLKSGDNGRSIYHTNLFWVGGAGLDAALSPTVTAELRIERQWMTDSPAGHVATLWPVAAGVRVAL*
Ga0070696_10177863723300005546Corn, Switchgrass And Miscanthus RhizosphereYGRAELALLPGGPVSPVVSLGVGAYRLKSDDNGQTVYHTNVFWSGGIGLDVAASPRVTVEARVERQWMRDANQGHVATFWPIAAGARIAL*
Ga0066701_1028314733300005552SoilNAERTTGTVSLRLLEAYGRAELALVPRVTVSPVLSLGAGGYRLKSGDNGQTVYHTNAFWSGGIGVDVEVTPSVIVEVRVERQWMRDTNQGHVATLWPVAAGVRVGL*
Ga0066707_1033156913300005556SoilRGTVSPVLSLGAGAYRLKSGDNGQTVYHTNAFWSGGIGIDVEVTPSVIVEVRVERQWMRDTNKGHVATLWPVAAGVRVAL*
Ga0066707_1078763713300005556SoilGRAELALLPRSQVSPVVSLGAGGYRLKSDDDGRTVYHTNAFWSGGVGLDVAVSPRVTLEVRAERQWMRDTNVGHVATFWPLGAGVRIAL*
Ga0066707_1088639813300005556SoilNGQTVYHTNAFWSGGVGLDVTVSPRVTLEARVERQWMRDTNLGHVATFWPVGVGARLGL*
Ga0066707_1097841113300005556SoilNGQTVYHTNAFWSGGVGLDVTVSPRVTLEARVERQWMRDTNLGHVATFWPVGVGARLAL*
Ga0066704_1040805333300005557SoilDNGLTVYHTNAFWSGGVGLDVTVSPRVTLEARVERQWMRDTNLGHVATFWPVGVGARLAL
Ga0066698_1033669613300005558SoilTGGTVSVALLEGYGRAELALLPRGQVSPVVSVSAGAYRLKSDDDGRTVYHTNAFWSGGVGLDIAVSPRVTLEVRAERQWMRDTNVGHVATFWPLGAGARIAL*
Ga0066700_1096254723300005559SoilQLLEGYGRAEFALVPRGTVSPVLSLGAGAYRLKSGDNGQTVDHTNLFWSGGVGADVVVTASVIVELRVERQWMRDPNQGHGATLWPLSAGVRAGL*
Ga0066670_1029541913300005560SoilYRLKSSDGGQTFYHTNGFWSAGGGVDVAVSPSVRLELRLERHWMRDTNFGHVATLWPLAAGVRAGL*
Ga0066702_1049392313300005575SoilAGGYRLKSDDNGQTVYHTNAFWSGGVGLDVTVSPRVTLEARVERQWMRDTNLGHVATFWPVGVGARLAL*
Ga0066691_1023107713300005586SoilRVKSGDDGQTVYHTNLFWSAGGGLDVGLSPTATAELRFERQWLTDSGVGHVGTLWPLEAGVRLAF*
Ga0066706_1042780733300005598SoilLALVPRATVSPVLSLGAGGYRLKSGDNGQTVYHTNAFWSGGIGVDVEVTPSVIVEVRVERQWMRDTNKGHVATLWPLSAGVRVGL*
Ga0066706_1135809913300005598SoilVPRGTVSPVLSLGAGAYRLKSGDNGQTVDHTNLFWSGGVGADVVVTASVIVELRVERQWMRDAGEGHIATFWPVAAGVRVGL*
Ga0066651_1004123913300006031SoilDDDGRTVYHTNAFWSGGVGVDITVSSRVTLELRAERQWMRDTNVGHVATFWPLGAGARVAF*
Ga0066656_1008338843300006034SoilVSLRLLEAYGRAELALVPRATVSPVLSLGAGGYRLESGDNGQTVYHTNVFWSGGIGVDVEVTPSVIVEVRVERQWMRDTNKGHVATLWPVAAGVRVGL*
Ga0066656_1014617813300006034SoilGGGAYRLKSSDGGQTFYHTNGFWSAGGGVDVAVSPSVRLELRLERHWMRDTNFGHVATLWPLAAGVRAGL*
Ga0066652_10077093213300006046SoilGVVSPVVALGGGAYRLKSADGGQTFYHTNTFWSGGGGLDVAVSPSVTLELRIERQWMWDANQGHVATLWPLAVGVRAGL*
Ga0066665_1117138213300006796SoilGSLNAELTTGTVSLRLLDAHGRAELALVPRATVSPVLSLGAGAYRLESGDNGQTVYHTNVFWSGGIGMDVEVTPSVIVEVRVERQWMRDTNKGHVATLWPVAAGARVGL*
Ga0066659_1037939013300006797SoilGAGAYRLKSGDNGQTVDHTNMFWSGGDGADVVVTASVIVDLRVERQWMRDPYHGHGATLWPLSAGVRAGL*
Ga0066659_1078332213300006797SoilAEFALVPRGTVSPVLSLGAGAYRLKSGDNGQTVDHTNLFWSGGVGADVVVTASVIVELRVERQWMRDAGEGHVATFWPVAAGVRVGL*
Ga0066659_1085586713300006797SoilAEFALVPRGTVSPVLSLGAGAYRLKSGDNGQTVDHTNLFWSGGVGADVVVTASVIVELRVERQWMRDANEGHVATFWPVAAGVRVGL*
Ga0075425_10083567013300006854Populus RhizosphereSPVVSLGAGGYRLKSGDNGQTVYHTNLFWSGGVGADVVVTPGVIVELRVERQWMRDTGQGHVATLWPLAAGVRVEL*
Ga0075425_10180953713300006854Populus RhizosphereAFVPRGTVSPVVSLGAGGYRLKSGDNGQTVYHTNLFWSGGVGADVVVTPSVIVELRVERQWMRDTNQGHVATFWPLAAGVRVEL*
Ga0075426_1011461053300006903Populus RhizosphereTGAVSLQLLEGYGRAEFAFVPRGTVSPVVSLGAGGYRLKSGDNGQTVYHTNLFWSGGVGADVVVTPGVIVELRVERQWMRDTGQGHVATLWPLAAGVRVEL*
Ga0075435_10008425713300007076Populus RhizosphereFAFVPRGTVSPVVSLGAGGYRLKSGDNGQTVYHTNLFWSGGVGADVVVTPSVIVELRVERQWMRDTNQGHVATFWPLAAGVRVEL*
Ga0075435_10172523513300007076Populus RhizosphereFAFVPRGTVSPVVSLGAGGYRLKSGDNGQTVYHTNLFWSGGVGADVVVTPGVIVELRLERQWMRDTGQGHVATLWPLAAGVRVEL*
Ga0099791_1020188533300007255Vadose Zone SoilQAVYHTNAFWSGGVGLDVAVSPRVTAEARVERQWMRDASQGHVATFWPMGAGARIAL*
Ga0066710_10086292233300009012Grasslands SoilAGGYRLKSGDNGQTVYHTNAFWSGGAGVDVVVSPSVIVEVRVERQWMRDTNQGHVATLWPVAAGVRVGL
Ga0099827_1116794513300009090Vadose Zone SoilRAEFALVPRGTVSPVLSLGAGAYRLKSGDNGQTVDHTNLFWSGGVGADVVVTASVIVELRVERQWMRDANEGHVATFWPVAAGVRVAL*
Ga0066709_10079809333300009137Grasslands SoilVLSLGAGGYRLKSGDNGQTVYHTNAYWSGGGGVDVVVSPSVIVEVRVERQWMRDTNQGHVATLWPVGVGVRVGL*
Ga0066709_10243072413300009137Grasslands SoilSPVLSLGAGGYRLKSGDNGQTVYHTNAFWSGGAGVDVVVSPSVIVEVRVERQWMRDTNQGHVATLWPVAAGVRVGL*
Ga0066709_10362170413300009137Grasslands SoilAGSLNADQTTGSASLQLLEGYGRAEFALVPRGTVSPVLSLGAGGYRLKSGDNGQTVDHTNLFWSGGVGADVVVTASVIVELRVERQWMRDPNQGHGATLWPLSAGVRAAL*
Ga0134088_1051943023300010304Grasslands SoilVSPVLSLGAGAYRLKSGDNGQTVYHTNLFWSGGVGADVVVTPSVVVELRVERQWMRDTNEGHVATLWPVAAGVRVGL*
Ga0134109_1004170813300010320Grasslands SoilAELALLPRGQVSPVVSLGAGGYRLKSDDDGRTVYHTNAFWSGGVGLDVAVSPRVTLEVRAERQWMRDTNVGHVATFWPLGAGVRVAF*
Ga0134067_1005146833300010321Grasslands SoilRLKSDDDGRTVYHTNAFWSGGVGLDVAVSPRVTLEVRAERQWMRDTNVGHVATFWPLGAGVRVAF*
Ga0134084_1017881523300010322Grasslands SoilGYGRAELALLPRGQVSPVVSLGAGGYRLKSDDDGRTVYHTNAFWSGGVGLDVAVSPRVTLEVRAERQWMRDTNVGHVATFWPLGAGVRVAF*
Ga0134065_1019164223300010326Grasslands SoilVSPVLSLGAGGYRLESGDNGQTVYHTNVFWSGGIGVDVEVTPSVIVEVRVERQWMRDTNKGHVATLWPVAAGVRVAL*
Ga0134111_1054136013300010329Grasslands SoilEGYGRAELALVPGGTVSPVVSLGAGGYRLKSGDNGQTVYHANLFWSGGVGADVVVTPSVIVELRVERQWMRDAGEGHVATFWPLSAGVRVGL*
Ga0134080_1026304723300010333Grasslands SoilAEWALVPRGAVSPVVSLGAGGYRLKSGDNGQTVYHTNAFWSGGGGVDVVVSPSVIVEVRVERQWLRDTNQGHVATLWPVAAGVRVAL*
Ga0134062_1015430823300010337Grasslands SoilVSPVLALGGGGYRLKSADGGQTFYHTNTFWSGGGGLDVAVSPSVTLELRIERQWMWDANQGHVATLWPLAVGVRAGL*
Ga0134066_1033212313300010364Grasslands SoilPVLALGGGAYRLKSSDGGQTFYHTNGFWSAGGGVDVAVSPSVRLELRLERHWMRDTNFGHVATLWPLAAGVRAGL*
Ga0134126_1058462613300010396Terrestrial SoilRAELALLPRRTITPVVSLGGGGYRLKSGDNGRAIYHTNLFWVGGVGLDATVSPTVTAELRIERQWMTDSPAGHVGTLWPVAAGVRVGL*
Ga0137392_1008647653300011269Vadose Zone SoilALVPRGTVSPVVSLGAGGYRLKSGDNGQTVYHTNLFWSGGVGADVVVTPSVIVELRVERQWMRDTNQGHVATLWPIAAGVRVAL*
Ga0137393_1081689913300011271Vadose Zone SoilTTASVSLQLLEGFGRAEFALVPRGTVSPVLSLGAGGYRLKSGDNGQTVYHTNLFWSGGVGADVVVTPSVIVELRVERQWMRDTNQGHVATLWPIAAGVRVTL*
Ga0137389_1010302853300012096Vadose Zone SoilSPVLSLGAGAYRLKSGDNGQTVYHTNLFWSGGVGADVVVTPSVIVELRVERQWMRDANQGHVATLWPVAAGVRVAL*
Ga0137389_1020156713300012096Vadose Zone SoilPDGPVSPVVSVGVGAYHLKSNDNGQTVYHTNAFWSGGVGLDVAVSPRVTLEARVERQWMRDANQGHVATFWPMGAGARIAL*
Ga0137364_1070553523300012198Vadose Zone SoilVSLGGGGYRLKSDDEGRTVYHTNAFWSGGVGLDVTVSPRVTLEVRAERQWMRDTNVGHVATFWPVGAGVRVAL*
Ga0137364_1144041213300012198Vadose Zone SoilALVPRGTVSPVLSLGAGGYRLKSGDNGQAVDHTNLFWSGGVGADVVVTASVIVELRVERQWMRDTNQGHGATLWPLSAGVRAGL*
Ga0137383_1005623413300012199Vadose Zone SoilVSPVLSLGAGAYRLKSGDSGRTVDHTNLFWSGGVGVDVVVTASVIVELRVERQWMRDANEGHVATFWPLSAGVRAAL*
Ga0137383_1036982613300012199Vadose Zone SoilAGSLNADQTTRAVSLQLLEGYGRAEFALVPRGTVSPVLSLGAGAYRLKSGDNGQTVDHTNLFWSGGVGADVVVTASVIVELRVERQWMRDANEGHVATFWPLSAGVRVGL*
Ga0137382_1004243343300012200Vadose Zone SoilVVSLGAGGYRLKSDDNGQTVYHTNAFWSGGVGLDVAVSPRVTLEARVERQWMRDTNQGHVATFWPVGVGARLAL*
Ga0137380_1142224213300012206Vadose Zone SoilALLPRGRVSPVVSLGAGGYRLKSDDDGRTVYHTNAFWSGGVGLDVAVSPRVTLEVRAERQWMQDTNVGHVATFWPLGAGARIAL*
Ga0137381_1041466913300012207Vadose Zone SoilSDDDGRTVYHTNAFWSGGVGLDVAVSPRVTLEVRAERQWMRDTNVGHVATFWPLGAGARIAL*
Ga0137381_1153583213300012207Vadose Zone SoilSDDDGRTVYHTNAFWSGGVGLDVAVSPRVTLEVRAERQWMQDTNVGHVATFWPLGAGARVAL*
Ga0137376_1100660213300012208Vadose Zone SoilPVLSLGAGGYRLKSGDNGQAVDHTNLFWSGGVGADVVVTPSVIVELRVERQWMRDAGQGHVATFWPLSAGVRVGL*
Ga0137376_1149580113300012208Vadose Zone SoilDEGRTVNHTNAFWSGGVGLDVTVSPRVTLEVRAERQWMRDTNVGHVATFWPVGAGVRVAL
Ga0137379_1017977043300012209Vadose Zone SoilGVGGYRLKSDDNGQTVYHTNAFWSGGVGLDVTVSPRVTLEARVERQWMRDTNLGHVATFWPLGVGARLAL*
Ga0137379_1076122433300012209Vadose Zone SoilGGYRLKSGDNGRTVDHTNLFWSSGVGADVVVTPSVIVELRVERQWMRDAGQGHVATFWPLSAGVRVGL*
Ga0137379_1090440023300012209Vadose Zone SoilGSLSLQLLEGYGRAEFALVPRGTVSPVLSLGAGGYRLKSGDNGRTVYHANLFWSGGVGADVVVTPSVIVELRVERQWMRDTGQGHVATFWPVAAGVRVGL*
Ga0137378_1116949923300012210Vadose Zone SoilLLEGFGRAEFALVPRGTVSPVLSLGAGAYRLKSGDNGQTVDHTNLFWSGGVGADVVVTASVIVELRVERQWMRDANEGHVATLWPVAAGVRVGL*
Ga0137370_1024225013300012285Vadose Zone SoilGAVSPVVSLGAGGYRLKSGDNGQTVYHTNAFWSGGGGVDVVVSPSVIVEVRVERQWLRDTNQGHVATLWPVAAGVRVGR*
Ga0137387_1013785313300012349Vadose Zone SoilSLGAGAYRLKSGDNGQTVYHTNLFWSGGVGADVVVTASVIVELRVERQWMRDTGEGHVATFWPVAAGVRVGL*
Ga0137366_1017222113300012354Vadose Zone SoilPRGTVSPVLSLGAGAYRLKSADNGQTVDHTNLFWSGSVGVDVVVTASVIVELRVERQWMRDANEGHVATFWPLSAGVRVGL*
Ga0137384_1023112413300012357Vadose Zone SoilSGDNGQTVYHTNTFWSGGGGVDVVVSPSVIVEVRVERQWLRDTNQGHVATLWPLAAGVRVAL*
Ga0137384_1025605913300012357Vadose Zone SoilAELAVLPRGPVSPVVSLGVGGYRLKSDDNGQTVYHTNAFWSGGVGLDVTVSPRVTLEARVERQWMRDTNLGHVATFWPVGVGARLAL*
Ga0137385_1148905223300012359Vadose Zone SoilQTTGSLSLQLLEGYGRAEFALVPRGTVSPVLSLGAGGYRLKSGDDGRTVDHSNLFWSGGVGADVVVTASVIVELRVERQWMRDTGEGHVATFWPVAAGVRVGL*
Ga0137359_1033624623300012923Vadose Zone SoilPRGTVTPVVSLGGGGYRLKSGDNGRAIYHTNLFWVGGVGLDAAVSPKVTAELRIERQWMTDSPAGHVATLWPVAAGLRVAL*
Ga0137419_1099486523300012925Vadose Zone SoilVVSLGGGGYRLKSGDNGRAIYHTNLFWIGGAGLDATVSPTVTAELRIERQWMTDSPAGHVATLWPVAAGLRVAL*
Ga0134073_1024988823300015356Grasslands SoilGGAYRLKSADGGQTVYHTNTFWSGGGGLDVAVSPSVTLELRIERHWMWDTNQGHVATLWPLAAGVRAGL*
Ga0134085_1061922423300015359Grasslands SoilFALVPRGTVSPVLSLGAGGYRLKSGDNGQTVDHTNLFWSGGVGADVVVTASVIVELRVERQWMRDKNQGHGATLWPLSAGVRAGL*
Ga0134112_1024776613300017656Grasslands SoilPRGPVSPVLSVGGGGYRVKSGDNGQTVYHTNVFWSAGGGLDVTVSPKVAAEVRLERQWMTDTGVGHVATLWPVGAGVRIAF
Ga0134083_1023820923300017659Grasslands SoilRLKSGDNGQTVDHTNLFWSGGVGADVVVTASVIVELRVERQWMRDANQGHVATFWPLSAGVRVGL
Ga0184618_1005161413300018071Groundwater SedimentGYRLKSGDNGRAIYHTNLFWVGGAGLDATVSPRVTAELRIERQWMTDSPAGHVATLWPVAAGLRVAL
Ga0066655_1024200713300018431Grasslands SoilKSDDDGRTVYHTNAFWSGGVGLDVAVSPRVTLEVRAERQWMRDTNVGHVATFWPLGAGVRVAF
Ga0066655_1042987723300018431Grasslands SoilAGSLNADQTTRSVSLQLLEGYGRAELALVPRGTVSPVLSLGAGGYRLKSGDNGQTVSHTNLFWSGGVGADVVVTSSVIVELRVERQWMRDANQGHVATFWPLSAGVRVGL
Ga0066667_1036589533300018433Grasslands SoilVLSLGAGGYRLKSGDNGQTVYHTNAFWSGGAGVDVVVSPSVIVEVRVERQWMRDTNQGHVATLWPVAAGVRVGL
Ga0066662_1133281423300018468Grasslands SoilKSADGGQTFYHTNTFWSGGGGVDVAVSPSVTLELRIERHWMRDTNQGHVATLWPLAAGVRAGL
Ga0207684_1141144013300025910Corn, Switchgrass And Miscanthus RhizosphereVSLGGGGYRLKGGDNGRAIYHTNLFWVGGAGLDATVSPTVTAELRIERQWMTDSPAGHVGTLWPVAAGVRVAL
Ga0209234_102924113300026295Grasslands SoilSLGAGAYRLKSDDNGLTVYHTNAFWSGGVGLDVTVSPRVTLEARVERQWMRDTNLGHVATFWPVGVGARLAL
Ga0209235_121774513300026296Grasslands SoilTAGSLNADQTTGSLSLQLLEGYGRAEFALVPRGTVSPVLSLGAGAYRLKSGDNGQTVYHTNLFWSGGVGADVVVTASVIVELRVERQWMRDTGEGHVATFWPVAAGVRVGL
Ga0209236_106910123300026298Grasslands SoilLKSNDNGQAVYHTNAFWSGGVGLDVAVSPRVTVEARVERQWMRDANQGHVATFWPMGAGARIAL
Ga0209236_121655213300026298Grasslands SoilAGSLNADQTTGSVSLQLLEGYGRAEFALVPRGTVSPVLSLGAGAYRLKSGDNGQTVDHTNLFWSGGVGADVVVTASVIVELRVERQWMRDAGEGHVATFWPVAAGVRVGL
Ga0209238_123378913300026301Grasslands SoilLLEGYGRAEFALVPRGTVSPVLALGAGGYRLKSGDNGQTVDHTNLFWSGGVGADVVVTASVIVELRVERQWMRDTNQGHGATLWPLSAGVRAAL
Ga0209468_112208233300026306SoilGAGAYRLKSGDNGQTVDHTNLFWSGGVGADVVVTASVIVELRVERQWMRDANEGHVATFWPVAAGVRVGL
Ga0209239_135803513300026310Grasslands SoilALGATAGSLNADQTTGSVSLQLLEGFGRAEFALVPRGTVSPVVSLGAGAYRLKSGDNGQTVYNTNLFWSGGVGADVVVTPSVIVELRVERQWMRDPNQGHGATLWPLSAGVRAAL
Ga0209687_114071823300026322SoilAYRLKSSDGGQTFYHTNGFWSAGGGVDVAVSPSVRLELRLERHWMRDTNFGHVATLWPLAAGVRAGL
Ga0209472_131119313300026323SoilFVLVPRGTVSPVLSLGAGAYRLKSGDNGQTVYHTNLFWSGGVGADVVVTASVIVELRVERQWMRDANQGHVATFWPLSAGVRVGL
Ga0209375_119150413300026329SoilDRPTGAVSLRLLEAYGRAELALVPRATVSPVLSLGAGGYRLKSGDNGQTVYHTNAFWSGGIGVDVEVTPSVIVEVRVERQWMRDTNKGHVATLWPLSAGVRVGL
Ga0209267_103957713300026331SoilVLPRGRVSPVVALGAGGYRLKSQDGGATVYHTNLFWSAGFGADGVVSPRVTVEVRFERQWMTDTDQGHVATLWPLGAGLRIAF
Ga0209803_135632613300026332SoilSPVLSVGAGAYRLKSGDNGQTVDHTNLFWSGGVGADVVVTASVIVELRVERQWMRDANEGHVATFWPLSAGVRVGL
Ga0209159_107400913300026343SoilQLLEGYGRAEFALVPRGTVSPVLSLGAGGYRLKSGDNGQTVDHTNLFWSGGVGADVVVTASVIVELRVERQWMRDANQGHGATLWPLSAGVRATL
Ga0209159_112339913300026343SoilTAGSLNADQTTRSVSLQLLEGYGRAEFALVPRGTVSPVLSLGAGAYRLKSGDNGQTVYHTNLFWSGGVGADVVVTASVIVELRVERQWMRDANQGHVATFWPLSAGVRVGL
Ga0209378_110586913300026528SoilLEGYGRAELALVPRGTVSPVLSLGAGAYRLKSGDNGQTVDHTNLFWSGGVGADVVVTASVIVELRVERQWMRDAGEGHVATFWPLSAGVRAGL
Ga0209806_108896433300026529SoilLNADQTTGSVSLQLLEGYGRAELALVPRGTVSPVLSLGAGAYRLKSGDNGQTVDHTNLFWSGGVGADVVVTASVIVELRVERQWMRDAGEGHVATFWPLSAGVRAGL
Ga0209056_1067058423300026538SoilGQVSPVVSLGAGGYRLKSDDDGRTVYHTNAFWSGGVGLDVAVSPRVTLEVRAERQWMRDTNVGHVATFWPLGAGVRVAF
Ga0209376_128271713300026540SoilRTTGAVSLRLLEASGRAELALVPRATVSPVLSLGAGAYRLESGDNGQTVYHTNVFWSGGIGVDVEVTPSVIVEVRVERQWMRDTNKGHVATLWPVAAGVRVGL
Ga0209161_1014535333300026548SoilGAGGYRLKSDDDGRTVYHTNAFWSGGVGLDVAVSPRVTLEVRAERQWMRDTNVGHVATFWPLGAGVRVAF
Ga0209161_1049114413300026548SoilLLEGYGRAEFALVPRGTVSPVLSLGAGAYRLKSGDNGQTVDHTNLFWSGGVGADVVVTASVIVELRVERQWMRDAGEGHIATFWPVAAGVRVGL
Ga0209474_1011845933300026550SoilALGGGAYRLKSADGGQTFYHTNTFWSGGGGLDVAVSPSVTLELRLERQWMWDANQGHVATLWPLAVGVRAGL
Ga0179587_1003163543300026557Vadose Zone SoilMTLVEAFGRVELAVLPGGPVSPVVSLAVGAYHLKSDDNGQTVYHTNAFWSGGVGLDVAVSPRVTLEARIERQWMRDANQGHVATFWPIGAGARIAL
Ga0209076_111495713300027643Vadose Zone SoilGGGGYRLKSGDNGRAIYHTNLFWVGGAGLDATVSPTVTAELRIERQWMTDSPAGHVATLWPVAAGLRVAL
Ga0209588_104336123300027671Vadose Zone SoilDNGQTVYHTNAFWSGGVGLDVAVSPRVTLEARVERQWMRDANQGHVATFWPMGAGARIAL
Ga0209689_117611713300027748SoilPRGTVSPVLSLGAGAYRLKSGDNGQTVDHTNLFWSGGVGADVVVTASVIVELRVERQWMRDAGEGHVATFWPLSAGVRAGL
Ga0209689_122938413300027748SoilPRGTVSPVLSLGAGAYRLKSGDNGQTVDHTNLFWSGGVGADVVVTASVIVELRVERQWMRDANRGHVATFWPVAAGVRVGL
Ga0209074_1005193913300027787Agricultural SoilPRGRLSPVVSFGAGGYRVKSGDDGQTVYHTSLFWSAGGGLDVGLSPTVTAELRFERQWLTDTGIGHVGTLWPLEGGVRLAF

 ⦗Top⦘


Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.