Metagenome / Metatranscriptome Family F065391

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F065391
Family Type	Metagenome / Metatranscriptome
Number of Sequences	127
Average Sequence Length	45 residues
Representative Sequence	MQSNFRHQQFNTMPKLAGVIASGWSTINCGSLSYDRTPEIRRVREDVV
Number of Associated Samples	98
Number of Associated Scaffolds	127

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	92.91 %
% of genes near scaffold ends (potentially truncated)	49.61 %
% of genes from short scaffolds (< 2000 bps)	51.18 %
Associated GOLD sequencing projects	88
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.18

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (48.819 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater (31.496 % of family members)
Environment Ontology (ENVO)	Unclassified (83.465 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Water (non-saline) (77.953 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 19.74% β-sheet: 0.00% Coil/Unstructured: 80.26%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.18
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.18
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 127 Family Scaffolds
PF00301	Rubredoxin	14.96
PF02627	CMD	7.09
PF02915	Rubrerythrin	7.09
PF05118	Asp_Arg_Hydrox	4.72
PF00574	CLP_protease	3.94
PF01041	DegT_DnrJ_EryC1	3.15
PF00578	AhpC-TSA	2.36
PF03401	TctC	1.57
PF04055	Radical_SAM	1.57
PF13207	AAA_17	1.57
PF09825	BPL_N	1.57
PF05637	Glyco_transf_34	1.57
PF01541	GIY-YIG	0.79
PF04851	ResIII	0.79
PF06508	QueC	0.79
PF01242	PTPS	0.79
PF13578	Methyltransf_24	0.79
PF16473	Rv2179c-like	0.79
PF00375	SDF	0.79
PF13759	2OG-FeII_Oxy_5	0.79
PF16363	GDP_Man_Dehyd	0.79
PF07437	YfaZ	0.79
PF11750	DUF3307	0.79
PF00313	CSD	0.79
PF13394	Fer4_14	0.79
PF02518	HATPase_c	0.79
PF07883	Cupin_2	0.79
PF13505	OMP_b-brl	0.79
PF00487	FA_desaturase	0.79
PF00881	Nitroreductase	0.79
PF08433	KTI12	0.79
PF01583	APS_kinase	0.79
PF04165	DUF401	0.79
PF04724	Glyco_transf_17	0.79

COG ID	Name	Functional Category	% Frequency in 127 Family Scaffolds
COG0616	Periplasmic serine protease, ClpP class	Posttranslational modification, protein turnover, chaperones [O]	7.87
COG0740	ATP-dependent protease ClpP, protease subunit	Posttranslational modification, protein turnover, chaperones [O]	7.87
COG0599	Uncharacterized conserved protein YurZ, alkylhydroperoxidase/carboxymuconolactone decarboxylase family	General function prediction only [R]	7.09
COG2128	Alkylhydroperoxidase family enzyme, contains CxxC motif	Inorganic ion transport and metabolism [P]	7.09
COG3555	Aspartyl/asparaginyl beta-hydroxylase, cupin superfamily	Posttranslational modification, protein turnover, chaperones [O]	4.72
COG1030	Membrane-bound serine protease NfeD, ClpP class	Posttranslational modification, protein turnover, chaperones [O]	3.94
COG0399	dTDP-4-amino-4,6-dideoxygalactose transaminase	Cell wall/membrane/envelope biogenesis [M]	3.15
COG0436	Aspartate/methionine/tyrosine aminotransferase	Amino acid transport and metabolism [E]	3.15
COG0520	Selenocysteine lyase/Cysteine desulfurase	Amino acid transport and metabolism [E]	3.15
COG0626	Cystathionine beta-lyase/cystathionine gamma-synthase	Amino acid transport and metabolism [E]	3.15
COG1104	Cysteine desulfurase/Cysteine sulfinate desulfinase IscS or related enzyme, NifS family	Amino acid transport and metabolism [E]	3.15
COG2873	O-acetylhomoserine/O-acetylserine sulfhydrylase, pyridoxal phosphate-dependent	Amino acid transport and metabolism [E]	3.15
COG3181	Tripartite-type tricarboxylate transporter, extracytoplasmic receptor component TctC	Energy production and conversion [C]	1.57
COG0037	tRNA(Ile)-lysidine synthase TilS/MesJ	Translation, ribosomal structure and biogenesis [J]	0.79
COG0137	Argininosuccinate synthase	Amino acid transport and metabolism [E]	0.79
COG0171	NH3-dependent NAD+ synthetase	Coenzyme transport and metabolism [H]	0.79
COG0301	Adenylyl- and sulfurtransferase ThiI (thiamine and tRNA 4-thiouridine biosynthesis)	Translation, ribosomal structure and biogenesis [J]	0.79
COG0482	tRNA U34 2-thiouridine synthase MnmA/TrmU, contains the PP-loop ATPase domain	Translation, ribosomal structure and biogenesis [J]	0.79
COG0519	GMP synthase, PP-ATPase domain/subunit	Nucleotide transport and metabolism [F]	0.79
COG0529	Adenylylsulfate kinase or related kinase	Inorganic ion transport and metabolism [P]	0.79
COG0603	7-cyano-7-deazaguanine synthase (queuosine biosynthesis)	Translation, ribosomal structure and biogenesis [J]	0.79
COG0720	6-pyruvoyl-tetrahydropterin synthase	Coenzyme transport and metabolism [H]	0.79
COG0780	NADPH-dependent 7-cyano-7-deazaguanine reductase QueF, C-terminal domain, T-fold superfamily	Translation, ribosomal structure and biogenesis [J]	0.79
COG1398	Fatty-acid desaturase	Lipid transport and metabolism [I]	0.79
COG1606	ATP-utilizing enzyme, PP-loop superfamily	General function prediction only [R]	0.79
COG1906	Predicted GntP-related membrane permease AF0261, DUF401 family	General function prediction only [R]	0.79
COG3239	Fatty acid desaturase	Lipid transport and metabolism [I]	0.79
COG4088	tRNA uridine 5-carbamoylmethylation protein Kti12 (Killer toxin insensitivity protein)	Translation, ribosomal structure and biogenesis [J]	0.79

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	51.18 %
Unclassified	root	N/A	48.82 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	48.82 %
Viruses	superkingdom	All Organisms → Viruses	29.13 %
cellular organisms	root	All Organisms → cellular organisms	22.05 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	48.82 %
Duplodnaviria	clade	All Organisms → Viruses → Duplodnaviria	25.98 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	22.05 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	3.15 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	48.82 %
Heunggongvirae	kingdom	All Organisms → Viruses → Duplodnaviria → Heunggongvirae	25.98 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	16.54 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	3.15 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	0.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	48.82 %
Uroviricota	phylum	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota	25.98 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	5.51 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	3.15 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.79 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	48.82 %
Caudoviricetes	class	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	25.98 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	5.51 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	3.15 %
unclassified Gammaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria	0.79 %
Verrucomicrobiae	class	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae	0.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	48.82 %
environmental samples	no rank	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples	23.62 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	3.15 %
Alcaligenaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Alcaligenaceae	0.79 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	0.79 %
Verrucomicrobiales	order	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales	0.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	48.82 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	23.62 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	3.15 %
unclassified Verrucomicrobiales	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → unclassified Verrucomicrobiales	0.79 %
Advenella	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Alcaligenaceae → Advenella	0.79 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	0.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	48.82 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	23.62 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	3.15 %
Verrucomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → unclassified Verrucomicrobiales → Verrucomicrobiales bacterium	0.79 %
Advenella kashmirensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Alcaligenaceae → Advenella → Advenella kashmirensis	0.79 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	0.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	48.82 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	23.62 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	3.15 %
Advenella kashmirensis WT001	strain	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Alcaligenaceae → Advenella → Advenella kashmirensis → Advenella kashmirensis WT001	0.79 %
Verrucomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → unclassified Verrucomicrobiales → Verrucomicrobiales bacterium	0.79 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	0.79 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000176\|TB03JUN2009E_c002052	All Organisms → cellular organisms → Bacteria → Proteobacteria	4850	Open in IMG/M
3300000439\|TBL_comb48_EPIDRAFT_1055352	Not Available	1366	Open in IMG/M
3300000756\|JGI12421J11937_10003111	All Organisms → cellular organisms → Bacteria → Proteobacteria	6668	Open in IMG/M
3300000756\|JGI12421J11937_10129431	Not Available	648	Open in IMG/M
3300000867\|EsTDRAFT_1014825	All Organisms → cellular organisms → Bacteria → Proteobacteria	3110	Open in IMG/M
3300002131\|M2t2BS1_1141208	Not Available	53515	Open in IMG/M
3300003277\|JGI25908J49247_10002562	All Organisms → cellular organisms → Bacteria → Proteobacteria	5811	Open in IMG/M
3300003375\|JGI26470J50227_1007781	Not Available	2815	Open in IMG/M
3300003393\|JGI25909J50240_1005728	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	3133	Open in IMG/M
3300003754\|Ga0005853_1035961	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	1475	Open in IMG/M
3300003783\|Ga0007850_1005141	Not Available	1155	Open in IMG/M
3300003783\|Ga0007850_1016867	Not Available	548	Open in IMG/M
3300003787\|Ga0007811_1002892	Not Available	2163	Open in IMG/M
3300003798\|Ga0007842_1005836	Not Available	881	Open in IMG/M
3300003804\|Ga0007817_1001671	Not Available	1841	Open in IMG/M
3300003804\|Ga0007817_1004795	Not Available	996	Open in IMG/M
3300003813\|Ga0007879_1014916	All Organisms → cellular organisms → Bacteria → Proteobacteria	836	Open in IMG/M
3300003820\|Ga0007863_1005243	Not Available	1416	Open in IMG/M
3300004124\|Ga0066178_10000620	All Organisms → cellular organisms → Bacteria → Proteobacteria	5299	Open in IMG/M
3300004124\|Ga0066178_10028027	All Organisms → cellular organisms → Bacteria	1339	Open in IMG/M
3300004687\|Ga0065174_1074564	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	636	Open in IMG/M
3300004763\|Ga0007746_1424593	Not Available	3574	Open in IMG/M
3300004770\|Ga0007804_1020702	All Organisms → Viruses → Predicted Viral	1829	Open in IMG/M
3300004770\|Ga0007804_1081370	Not Available	832	Open in IMG/M
3300004777\|Ga0007827_10136653	Not Available	547	Open in IMG/M
3300004810\|Ga0007757_11389012	Not Available	589	Open in IMG/M
3300005517\|Ga0070374_10478368	Not Available	622	Open in IMG/M
3300005527\|Ga0068876_10411740	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Alcaligenaceae → Advenella → Advenella kashmirensis → Advenella kashmirensis WT001	753	Open in IMG/M
3300005528\|Ga0068872_10087902	Not Available	1874	Open in IMG/M
3300005580\|Ga0049083_10186818	Not Available	706	Open in IMG/M
3300005582\|Ga0049080_10010650	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	3189	Open in IMG/M
3300005582\|Ga0049080_10101091	All Organisms → cellular organisms → Bacteria	981	Open in IMG/M
3300005582\|Ga0049080_10125676	Not Available	866	Open in IMG/M
3300005584\|Ga0049082_10032414	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1829	Open in IMG/M
3300005584\|Ga0049082_10038065	Not Available	1685	Open in IMG/M
3300005662\|Ga0078894_10147228	Not Available	2112	Open in IMG/M
3300005662\|Ga0078894_11321031	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	606	Open in IMG/M
3300005912\|Ga0075109_1020659	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	2716	Open in IMG/M
3300005941\|Ga0070743_10041962	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1565	Open in IMG/M
3300006071\|Ga0007876_1009282	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	2853	Open in IMG/M
3300006072\|Ga0007881_1115962	All Organisms → cellular organisms → Bacteria	664	Open in IMG/M
3300006072\|Ga0007881_1180719	Not Available	508	Open in IMG/M
3300006100\|Ga0007806_1005889	Not Available	3122	Open in IMG/M
3300006101\|Ga0007810_1003812	Not Available	4174	Open in IMG/M
3300006101\|Ga0007810_1015243	Not Available	1837	Open in IMG/M
3300006105\|Ga0007819_1005083	Not Available	3627	Open in IMG/M
3300006119\|Ga0007866_1015777	Not Available	1601	Open in IMG/M
3300006123\|Ga0007852_1029789	Not Available	1321	Open in IMG/M
3300006127\|Ga0007805_1009487	Not Available	2505	Open in IMG/M
3300006128\|Ga0007828_1010730	Not Available	1949	Open in IMG/M
3300006128\|Ga0007828_1016677	Not Available	1548	Open in IMG/M
3300008950\|Ga0102891_1253341	Not Available	501	Open in IMG/M
3300009182\|Ga0114959_10010682	Not Available	6325	Open in IMG/M
3300009419\|Ga0114982_1004112	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	5824	Open in IMG/M
3300010157\|Ga0114964_10050866	Not Available	2172	Open in IMG/M
3300010157\|Ga0114964_10303282	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	757	Open in IMG/M
3300010885\|Ga0133913_10262865	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	4579	Open in IMG/M
3300010885\|Ga0133913_10502219	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	3195	Open in IMG/M
3300010885\|Ga0133913_11324732	All Organisms → Viruses → Predicted Viral	1837	Open in IMG/M
3300012771\|Ga0138270_1082363	Not Available	680	Open in IMG/M
3300012779\|Ga0138284_1387199	All Organisms → cellular organisms → Bacteria → Proteobacteria	932	Open in IMG/M
3300013004\|Ga0164293_10105381	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	2158	Open in IMG/M
3300013093\|Ga0164296_1024058	All Organisms → cellular organisms → Bacteria	3650	Open in IMG/M
3300013285\|Ga0136642_1000788	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	15167	Open in IMG/M
3300013285\|Ga0136642_1009454	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	3079	Open in IMG/M
3300013285\|Ga0136642_1024538	Not Available	1746	Open in IMG/M
3300013286\|Ga0136641_1214509	Not Available	507	Open in IMG/M
3300013372\|Ga0177922_10926419	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	4060	Open in IMG/M
3300017761\|Ga0181356_1249157	Not Available	507	Open in IMG/M
3300020151\|Ga0211736_10382712	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	3523	Open in IMG/M
3300020161\|Ga0211726_10939277	All Organisms → cellular organisms → Bacteria → Proteobacteria	2460	Open in IMG/M
3300020172\|Ga0211729_11088331	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	2833	Open in IMG/M
3300020205\|Ga0211731_11194301	Not Available	6772	Open in IMG/M
3300020205\|Ga0211731_11507859	Not Available	682	Open in IMG/M
3300020205\|Ga0211731_11713598	All Organisms → cellular organisms → Bacteria → Proteobacteria	2966	Open in IMG/M
3300020731\|Ga0214170_1009903	Not Available	1907	Open in IMG/M
3300021137\|Ga0214165_1027358	All Organisms → cellular organisms → Bacteria → Proteobacteria	1389	Open in IMG/M
3300021139\|Ga0214166_1000579	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	17932	Open in IMG/M
3300021142\|Ga0214192_1054767	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1218	Open in IMG/M
3300021142\|Ga0214192_1151491	Not Available	590	Open in IMG/M
3300021956\|Ga0213922_1125512	Not Available	503	Open in IMG/M
3300022822\|Ga0222646_101439	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	5692	Open in IMG/M
3300024346\|Ga0244775_10029803	All Organisms → cellular organisms → Bacteria	4868	Open in IMG/M
3300024346\|Ga0244775_10071864	Not Available	2965	Open in IMG/M
3300025358\|Ga0208504_1000983	Not Available	6244	Open in IMG/M
3300025369\|Ga0208382_1045127	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	508	Open in IMG/M
3300025379\|Ga0208738_1004061	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	2841	Open in IMG/M
3300025383\|Ga0208250_1000202	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	20496	Open in IMG/M
3300025383\|Ga0208250_1002578	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	4136	Open in IMG/M
3300025389\|Ga0208257_1024252	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	919	Open in IMG/M
3300025421\|Ga0207958_1020034	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	1110	Open in IMG/M
3300025429\|Ga0208500_1007645	All Organisms → Viruses → Predicted Viral	1736	Open in IMG/M
3300025430\|Ga0208622_1042541	Not Available	840	Open in IMG/M
3300025430\|Ga0208622_1067492	Not Available	612	Open in IMG/M
3300025438\|Ga0208770_1078824	Not Available	574	Open in IMG/M
3300025466\|Ga0208497_1040457	All Organisms → cellular organisms → Bacteria → Proteobacteria	965	Open in IMG/M
3300025598\|Ga0208379_1000248	Not Available	25271	Open in IMG/M
3300025723\|Ga0208741_10120214	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	604	Open in IMG/M
3300025773\|Ga0208104_1000076	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	18578	Open in IMG/M
3300025778\|Ga0208388_1010134	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	1639	Open in IMG/M
3300027608\|Ga0208974_1013100	Not Available	2659	Open in IMG/M
3300027631\|Ga0208133_1008119	Not Available	2965	Open in IMG/M
3300027642\|Ga0209135_1004166	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	5215	Open in IMG/M
3300027642\|Ga0209135_1022168	Not Available	2282	Open in IMG/M
3300027741\|Ga0209085_1360356	Not Available	535	Open in IMG/M
3300027763\|Ga0209088_10269451	Not Available	700	Open in IMG/M
3300027782\|Ga0209500_10020980	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	3805	Open in IMG/M
3300027785\|Ga0209246_10223707	Not Available	732	Open in IMG/M
3300027797\|Ga0209107_10001438	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	13350	Open in IMG/M
3300028394\|Ga0304730_1003796	Not Available	10074	Open in IMG/M
3300031784\|Ga0315899_10744593	Not Available	905	Open in IMG/M
3300032116\|Ga0315903_10086789	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	3032	Open in IMG/M
3300032668\|Ga0316230_1005533	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	8654	Open in IMG/M
3300032753\|Ga0316224_1053986	Not Available	1680	Open in IMG/M
3300033992\|Ga0334992_0003150	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	12346	Open in IMG/M
3300033992\|Ga0334992_0006394	All Organisms → cellular organisms → Bacteria	8258	Open in IMG/M
3300033995\|Ga0335003_0005773	All Organisms → cellular organisms → Bacteria → Proteobacteria	6314	Open in IMG/M
3300034082\|Ga0335020_0000046	Not Available	100131	Open in IMG/M
3300034082\|Ga0335020_0034468	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	2747	Open in IMG/M
3300034093\|Ga0335012_0459925	Not Available	611	Open in IMG/M
3300034095\|Ga0335022_0006517	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	7247	Open in IMG/M
3300034105\|Ga0335035_0026545	Not Available	3862	Open in IMG/M
3300034105\|Ga0335035_0040657	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	3083	Open in IMG/M
3300034283\|Ga0335007_0263494	Not Available	1153	Open in IMG/M
3300034356\|Ga0335048_0015636	All Organisms → cellular organisms → Bacteria → Proteobacteria	5457	Open in IMG/M
3300034356\|Ga0335048_0017625	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → unclassified Verrucomicrobiales → Verrucomicrobiales bacterium	5085	Open in IMG/M
3300034356\|Ga0335048_0140860	All Organisms → Viruses → Predicted Viral	1394	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	99.21%
Terrestrial	Environmental → Terrestrial	0.79%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	91.34%
Marine	Environmental → Aquatic → Marine	4.72%
Non-Marine Saline And Alkaline	Environmental → Aquatic → Non-Marine Saline And Alkaline	2.36%
Unclassified	Environmental → Aquatic → Unclassified	0.79%
Deep Subsurface	Environmental → Terrestrial → Deep Subsurface	0.79%

Habitat	Taxonomy	Distribution
Lentic	Environmental → Aquatic → Freshwater → Lentic	59.06%
Lake	Environmental → Aquatic → Freshwater → Lake	29.92%
Unclassified	Environmental → Aquatic → Marine → Unclassified	3.15%
Saline	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline	2.36%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified	1.57%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	1.57%
Creek	Environmental → Aquatic → Freshwater → Creek	0.79%
Unclassified	Environmental → Aquatic → Unclassified → Unclassified	0.79%
Unclassified	Environmental → Terrestrial → Deep Subsurface → Unclassified	0.79%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Freshwater → Lentic → Unclassified	48.82%
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	29.92%
Epilimnion	Environmental → Aquatic → Freshwater → Lentic → Epilimnion	5.51%
Hypolimnion	Environmental → Aquatic → Freshwater → Lentic → Hypolimnion	4.72%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	3.15%
Unclassified	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified	2.36%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified → Unclassified	1.57%
Estuary	Environmental → Aquatic → Marine → Intertidal Zone → Estuary	1.57%
Unclassified	Environmental → Aquatic → Freshwater → Creek → Unclassified	0.79%
Unclassified	Environmental → Aquatic → Unclassified → Unclassified → Unclassified	0.79%
Unclassified	Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified	0.79%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater	31.50%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake	11.81%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	11.81%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake	9.45%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	8.66%
Freshwater Lentic	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lentic	5.51%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Epilimnion → Freshwater	4.72%
Estuarine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine	3.15%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Hypolimnion → Freshwater	2.36%
Freshwater And Sediment	Environmental → Aquatic → Freshwater → Lentic → Hypolimnion → Freshwater And Sediment	2.36%
Freshwater	Environmental → Aquatic → Freshwater → Unclassified → Unclassified → Freshwater	1.57%
Saline Lake	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified → Saline Lake	1.57%
Freshwater And Sediment	Environmental → Aquatic → Freshwater → Lentic → Epilimnion → Freshwater And Sediment	0.79%
Freshwater	Environmental → Aquatic → Freshwater → Creek → Unclassified → Freshwater	0.79%
Estuarine	Environmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine	0.79%
Freshwater And Marine	Environmental → Aquatic → Marine → Intertidal Zone → Estuary → Freshwater And Marine	0.79%
Saline Water	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified → Saline Water	0.79%
Marine	Environmental → Aquatic → Unclassified → Unclassified → Unclassified → Marine	0.79%
Deep Subsurface	Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified → Deep Subsurface	0.79%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000176	Freshwater microbial communities from Trout Bog Lake, WI - Practice 03JUN2009 epilimnion	Environmental	Open in IMG/M
3300000439	Trout Bog Lake June 7 2007 Epilimnion (Trout Bog Lake Combined Assembly 48 Epilimnion Samples, Aug 2012 Assem)	Environmental	Open in IMG/M
3300000756	Freshwater microbial communities from dead zone in Lake Erie, Canada - CCB hypolimnion July 2011	Environmental	Open in IMG/M
3300000867	Estuary microbial communities from the Columbia River - metatranscriptome 5 PSU	Environmental	Open in IMG/M
3300002131	Marine microbial communities from the Baltic Sea, analyzing arctic terrigenous carbon compounds - M2t2BS1 (111f)	Environmental	Open in IMG/M
3300003277	Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM15.SD	Environmental	Open in IMG/M
3300003375	Freshwater actinobacteria microbial communities from Trout Bog Lake, Wisconsin, USA - enrichment TB-E6	Environmental	Open in IMG/M
3300003393	Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM15.DD	Environmental	Open in IMG/M
3300003754	Freshwater and sediment microbial communities from Lake Ontario - Sta 18 epilimnion (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300003783	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH05Oct08	Environmental	Open in IMG/M
3300003787	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE21Jul09	Environmental	Open in IMG/M
3300003798	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE10Sep07	Environmental	Open in IMG/M
3300003804	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE29May09	Environmental	Open in IMG/M
3300003813	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH15Jun09	Environmental	Open in IMG/M
3300003820	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH10Sep07	Environmental	Open in IMG/M
3300004124	Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MM15.SD (version 2)	Environmental	Open in IMG/M
3300004687	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE25Jul08 (version 2)	Environmental	Open in IMG/M
3300004763	Metatranscriptome of freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM110.DD (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004770	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE25Aug07	Environmental	Open in IMG/M
3300004777	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE16Jul07	Environmental	Open in IMG/M
3300004810	Metatranscriptome of freshwater lake microbial communities from Lake Michigan, USA - Fa13.BD.MM15.SN (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005517	Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MM15.SN (version 4)	Environmental	Open in IMG/M
3300005527	Freshwater lake microbial communities from Lake Erie, under a cyanobacterial bloom - NOAA_Erie_Diel5S_2200h metaG	Environmental	Open in IMG/M
3300005528	Freshwater lake microbial communities from Lake Erie, under a cyanobacterial bloom - NOAA_Erie_Diel1S_2200h metaG	Environmental	Open in IMG/M
3300005580	Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG MI27MSRF	Environmental	Open in IMG/M
3300005582	Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG ER15MSRF	Environmental	Open in IMG/M
3300005584	Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG HU45MSRF	Environmental	Open in IMG/M
3300005662	Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MLB.SD (version 4)	Environmental	Open in IMG/M
3300005912	Saline lake microbial communities from Ace Lake, Antarctica - Antarctic Ace Lake Metagenome 02UKD	Environmental	Open in IMG/M
3300005941	Estuarine microbial communities from the Columbia River estuary, USA - metaG S.697	Environmental	Open in IMG/M
3300006071	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH24Aug09	Environmental	Open in IMG/M
3300006072	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH12Aug09	Environmental	Open in IMG/M
3300006100	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE18Aug09	Environmental	Open in IMG/M
3300006101	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE15Jun09	Environmental	Open in IMG/M
3300006105	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE07Jul09	Environmental	Open in IMG/M
3300006119	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH18Jul07	Environmental	Open in IMG/M
3300006123	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH28Sep08	Environmental	Open in IMG/M
3300006127	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE24Aug09	Environmental	Open in IMG/M
3300006128	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE16Oct07	Environmental	Open in IMG/M
3300008950	Estuarine microbial communities from the Columbia River estuary - metaG 1552A-02	Environmental	Open in IMG/M
3300009182	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_130625_EF_MetaG	Environmental	Open in IMG/M
3300009419	Subsurface microbial communities from deep shales in Ohio, USA - Utica-3 well 1 S input2 FT	Environmental	Open in IMG/M
3300010157	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_131016_MF_MetaG	Environmental	Open in IMG/M
3300010885	northern Canada Lakes Co-assembly	Environmental	Open in IMG/M
3300012771	Freshwater microbial communities from Lake Croche, Canada - C_130625_E_mt (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012779	Freshwater microbial communities from Lake Simoncouche, Canada - S_130206_E_mt (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300013004	Eutrophic lake water microbial communities from Lake Mendota, Wisconsin, USA - GEODES118 metaG	Environmental	Open in IMG/M
3300013093	Dystrophic lake water microbial communities from Trout Bog Lake, Wisconsin, USA - GEODES057 metaG	Environmental	Open in IMG/M
3300013285	Freshwater microbial communities from Lower Cathedral Lake, Yosemite National Park, California, USA - 13028-31Y	Environmental	Open in IMG/M
3300013286	Freshwater microbial communities from Elizabeth Lake, Yosemite National Park, California, USA - 13020-23Y	Environmental	Open in IMG/M
3300013372	Freshwater microbial communities from Lake Erie, Ontario, Canada. Combined Assembly of 10 SPs	Environmental	Open in IMG/M
3300017761	Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM110.S.N	Environmental	Open in IMG/M
3300020151	Freshwater lake microbial communities from Lake Erken, Sweden - P4710_202 megahit1	Environmental	Open in IMG/M
3300020161	Freshwater lake microbial communities from Lake Erken, Sweden - P4710_101 megahit1	Environmental	Open in IMG/M
3300020172	Freshwater lake microbial communities from Lake Erken, Sweden - P4710_102 megahit1	Environmental	Open in IMG/M
3300020205	Freshwater lake microbial communities from Lake Erken, Sweden - P4710_103 megahit1	Environmental	Open in IMG/M
3300020731	Freshwater microbial communities from Trout Bog Lake, WI - 27JUN2007 epilimnion	Environmental	Open in IMG/M
3300021137	Freshwater microbial communities from Trout Bog Lake, WI - Practice 03JUN2009 hypolimnion	Environmental	Open in IMG/M
3300021139	Freshwater microbial communities from Trout Bog Lake, WI - Practice 18AUG2009 epilimnion	Environmental	Open in IMG/M
3300021142	Freshwater microbial communities from Trout Bog Lake, WI - 29JUL2008 epilimnion	Environmental	Open in IMG/M
3300021956	Freshwater microbial communities from McNutts Creek, Athens, Georgia, United States - 29-17 MG	Environmental	Open in IMG/M
3300022822	Saline water microbial communities from Ace Lake, Antarctica - #293	Environmental	Open in IMG/M
3300024346	Whole water sample coassembly	Environmental	Open in IMG/M
3300025358	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH05Oct08 (SPAdes)	Environmental	Open in IMG/M
3300025369	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE28Sep08 (SPAdes)	Environmental	Open in IMG/M
3300025379	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE21Jul09 (SPAdes)	Environmental	Open in IMG/M
3300025383	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE18Aug09 (SPAdes)	Environmental	Open in IMG/M
3300025389	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH10Sep07 (SPAdes)	Environmental	Open in IMG/M
3300025421	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH27Jul07 (SPAdes)	Environmental	Open in IMG/M
3300025429	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE17Sep08 (SPAdes)	Environmental	Open in IMG/M
3300025430	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH12Jul09 (SPAdes)	Environmental	Open in IMG/M
3300025438	Saline lake microbial communities from Ace Lake, Antarctica - Antarctic Ace Lake Metagenome 02UK9 (SPAdes)	Environmental	Open in IMG/M
3300025466	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE25Aug07 (SPAdes)	Environmental	Open in IMG/M
3300025598	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE02Aug07 (SPAdes)	Environmental	Open in IMG/M
3300025723	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE03Jun09 (SPAdes)	Environmental	Open in IMG/M
3300025773	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE29May09 (SPAdes)	Environmental	Open in IMG/M
3300025778	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH18Jul07 (SPAdes)	Environmental	Open in IMG/M
3300027608	Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG ER15MSRF (SPAdes)	Environmental	Open in IMG/M
3300027631	Estuarine microbial communities from the Columbia River estuary, USA - metaG S.535 (SPAdes)	Environmental	Open in IMG/M
3300027642	Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MM110.SD (SPAdes)	Environmental	Open in IMG/M
3300027741	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_131016_EF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027763	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140625_EF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027782	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140212_EF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027785	Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM15.SN (SPAdes)	Environmental	Open in IMG/M
3300027797	Freshwater microbial communities from dead zone in Lake Erie, Canada - CCB hypolimnion July 2011 (SPAdes)	Environmental	Open in IMG/M
3300028394	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_130628_MF_MetaG (v2)	Environmental	Open in IMG/M
3300031784	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 4 MA112	Environmental	Open in IMG/M
3300032116	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 2 MA119	Environmental	Open in IMG/M
3300032668	Freshwater microbial communities from Trout Bog Lake, Wisconsin, USA - TBH18025	Environmental	Open in IMG/M
3300032753	Freshwater microbial communities from Trout Bog Lake, Wisconsin, USA - TBH18013	Environmental	Open in IMG/M
3300033992	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME16Jun2014-rr0035	Environmental	Open in IMG/M
3300033995	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME23May2014-rr0056	Environmental	Open in IMG/M
3300034082	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME05Jun2015-rr0088	Environmental	Open in IMG/M
3300034093	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME08Jun2014-rr0072	Environmental	Open in IMG/M
3300034095	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME02Feb2014D0-rr0091	Environmental	Open in IMG/M
3300034105	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME15May2014-rr0127	Environmental	Open in IMG/M
3300034283	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME07Aug2003-rr0061	Environmental	Open in IMG/M
3300034356	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME17Jun2014-rr0152	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
TB03JUN2009E_0020529	3300000176	Freshwater	MQSNFRHQHFNWMPKQVGVIASYWSAIDCGSLLSLDRTPE
TBL_comb48_EPIDRAFT_10553526	3300000439	Freshwater	MQSNHRHQFNTMPKQVGFIASCWSAINSLSYDRLPEIRRVRRTVV*
JGI12421J11937_100031112	3300000756	Freshwater And Sediment	MQSNVRHQQFNTMPKLAGVIACSWLSINGGSLSYDRTPEISRVRETVV*
JGI12421J11937_101294311	3300000756	Freshwater And Sediment	MQSFNRHQQFNTMPKLAGVIACSWLSINGGSLSYD
EsTDRAFT_10148255	3300000867	Freshwater And Marine	MQSNVRHQQFNTMPKQAGLIASNWSTINGGSLSYDRTPEISRVREGWDG*
M2t2BS1_114120894	3300002131	Marine	MQSCNRQHTFNTMPKQAGLIASGWSAINCVSLSYDRTPEITGVQEGWDG*
JGI25908J49247_100025628	3300003277	Freshwater Lake	MQSTVKHQQFNTMPKLAGVIACSWLSINGGSLSYDRTPEIRRVRETVM*
JGI26470J50227_10077813	3300003375	Freshwater	MQSNFKHQQFNTMPKLAGVIACSWSAINSGSLSYDRTPEINSRVREDIL*
JGI25909J50240_10057287	3300003393	Freshwater Lake	MQSCNRHHQFNTMPKQVGVIASYWLSINAGSLSSLDRTPEIRRVRETVV*
Ga0005853_10359614	3300003754	Freshwater And Sediment	MQSNFKHQQFNTMPTLAGVIASSWSTINCGSLSYDRTPEIIRVREGWDG*
Ga0007850_10051416	3300003783	Freshwater	MQSNVRHQQFNTMPKLAGVIASNWSAINGGSLSLDRTPEIYTRVREGWDD*
Ga0007850_10168672	3300003783	Freshwater	NFRQHQFNTMPKQVGVIASYWSAINCGSLLSLDRTPEINSRVREDIM*
Ga0007811_10028924	3300003787	Freshwater	MQSSFKHQQFNTMPKLAGVIACSWSAINGGSLSYDRTPEINSRVREDIL*
Ga0007842_10058362	3300003798	Freshwater	MQSNFRQHQFNWMPKQVGVIASYWSAINCGSLSSLDRTPEITG
Ga0007817_10016716	3300003804	Freshwater	MQSNFRQHQFNWMPKQVGVIASYWSAINCGSLLSLDRTPEITRVREDMM*
Ga0007817_10047953	3300003804	Freshwater	MQSNFRQHQFNTMPKQVGVIASYWSAINGGSLSSLDRTPEINSRVREDIL*
Ga0007879_10149163	3300003813	Freshwater	MQSNFRQHQFNTMPKQVGVIASYWSAINGGSLSSLDRTPEINS
Ga0007863_10052432	3300003820	Freshwater	MQSNFKHQQFNTMPKLAGVIACSWSAINGGSLSYDRTPEINSRVREDIL*
Ga0066178_100006208	3300004124	Freshwater Lake	MQSTVKHQQFNTMPKLAGVIACSWLSINGGSLSYDRTPEIRRVR
Ga0066178_100280271	3300004124	Freshwater Lake	MQSCNRHHQFNTMPKQVGVIASYWLSINAGSLSSLDRTPEIRR
Ga0065174_10745641	3300004687	Freshwater	MQSNFRQHQFNTMPKQVGVIASYWSAINCGSLLSLDRTPEINSRVREDIM*
Ga0007746_14245933	3300004763	Freshwater Lake	MQSNVKHQQFNTMPRLAGVIACSWLSINGGSLSYDRTPEIRRVR
Ga0007804_10207024	3300004770	Freshwater	MQSNFRQHQFNTMPKQVGVIASYWSAINCGSLSSLDRTPEITRVREDMM*
Ga0007804_10813704	3300004770	Freshwater	MQSNFRQHQFNWMPKQVGVIASYWSAIDCGSLLSLDRTPEINSRVREDTL*
Ga0007827_101366531	3300004777	Freshwater	MQSNFRQHQFNTMPKQVGVIASYWSAINSGSLLSLDRTPEINSRVREDIL*
Ga0007757_113890121	3300004810	Freshwater Lake	MQSSVRHQHFNTMPKQVGFIASNWLSIECGSLSYDRTPEIISGSTENKV*
Ga0070374_104783681	3300005517	Freshwater Lake	MQSNVKHQQFNAMPKLAGLIASGWQAINCGSLSYDRTPEIRRVRGTVV*
Ga0068876_104117403	3300005527	Freshwater Lake	MQSNFRHHQFNTMPKQVGVIASYWSAINCGSLSSLDRTPEIQRVRRT
Ga0068872_100879025	3300005528	Freshwater Lake	MQSFNRHQQFNTMPKLAGVIACSWLSINGGSLSYDRTPEI
Ga0049083_101868183	3300005580	Freshwater Lentic	MQSNVKHQQFNAMPKLAGLIASGWQAINCGSLSYDRTPEIRRVR
Ga0049080_100106506	3300005582	Freshwater Lentic	MQSTVKHQQFNTMPKLAGVIACSWLSINGGSLSYDRTPEIRRVREGWDD*
Ga0049080_101010911	3300005582	Freshwater Lentic	MQSNFRQSHFNTMPKQAGVIACSWLSINGGSLSYDRTP
Ga0049080_101256761	3300005582	Freshwater Lentic	MQSSSRHSLFNTMPKQAGVIACSWLSINGGSLSYDRTPEISRVREGWDG*
Ga0049082_100324149	3300005584	Freshwater Lentic	MQSNFRQSHFNTMPKLAGVIACSWLSINGGSLSYDRTPEIPRVRETVV*
Ga0049082_100380652	3300005584	Freshwater Lentic	MQLSNRHQLFNTMPKQAGVIACAWLSINGGSLSYDRTPEISRVREDIV*
Ga0078894_101472283	3300005662	Freshwater Lake	MQIVARHQQFNTMPKQAGFVASNWLSIECGSLSYDRTPEITRVREGWDG*
Ga0078894_113210312	3300005662	Freshwater Lake	MQSTVRHQLFNKMPKQAGVIASNWLSIECGSLSYDRTPEI
Ga0075109_10206591	3300005912	Saline Lake	MQSFNRQHTFNTMPKQLGVIASGWSAINCESLSYDRTPEITRVREGWDG*
Ga0070743_100419621	3300005941	Estuarine	MQNIARHQQFNTMPKQVGVIASNWLSIDCGSLSYDRTPEILRVREDIV*
Ga0007876_10092821	3300006071	Freshwater	MQSNFRQHQFNTMPKQVGVIASYWSAINGGSLSYDRTPEINSRVREDIM*
Ga0007881_11159623	3300006072	Freshwater	MQSTFRHQLFNTMPKQAGVIACSWSAISGESLSYDRLPE
Ga0007881_11807191	3300006072	Freshwater	MQSNHRHQFNTMPKLAGVIACSWSAINSGSLSYDRTPEINSRVRRTVV*
Ga0007806_10058896	3300006100	Freshwater	MQSTFRHQLFNTMPKQAGVIASCWSAINSGSLSYD
Ga0007810_10038127	3300006101	Freshwater	MQSNFRQHQFNTMPKQVGVIASYWSAINCGSLSSLDRTPEISRVREDMM*
Ga0007810_10152435	3300006101	Freshwater	MQSSFKHQQFNTMPKLAGVIACSWSAINGGSLSYDRTP
Ga0007819_10050837	3300006105	Freshwater	MQSNFRQHQFNTMPKQVGVIASYWSAINCGSLSSLDRTPEI
Ga0007866_10157771	3300006119	Freshwater	KMQSNFRQHQFNTMPKQVGVIASYWSAINGGSLSLDRTPEINTRVREDIL*
Ga0007852_10297894	3300006123	Freshwater	MQSNFRQHQFNWMPKQVGVIASYWSAIDCGSLLSLDRTPEINSRVRED
Ga0007805_10094872	3300006127	Freshwater	MQSTFRHQLFNTMPKQAGVIACSWSAISGESLSYDRLPEIRRVRRTVV*
Ga0007828_10107301	3300006128	Freshwater	KMQSNFRQHQFNWMPKQVGVIASYWSAINCGSLLSLDRTPEITRVREDMM*
Ga0007828_10166772	3300006128	Freshwater	MQSNFRQHQFNWMPKQVGVIASYWSAINCGSLSSLDRTPEITGVREDIL*
Ga0102891_12533411	3300008950	Estuarine	MQSNFRHQQFNTMPKQVGVIASYWLSINAGSLSSLDRTPEIPRVRETVV
Ga0114959_1001068211	3300009182	Freshwater Lake	MQSNFRQQQFNTIAKCGGVMPSYWLAINSGSLSSLDRTPEIRRVREDTV*
Ga0114982_100411211	3300009419	Deep Subsurface	MQSFNRHQQFNTMPKQAGVIASNWLSIECGSLSYDRTPEIT
Ga0114964_100508663	3300010157	Freshwater Lake	MQSNVKHQQFNTMPKLAGFIASGWSMINCGSLSYD
Ga0114964_103032821	3300010157	Freshwater Lake	MQSNFRHQHFNTMPKQVGVIASYWLSINAGSLSSLDRTPEIRR
Ga0133913_102628656	3300010885	Freshwater Lake	MQSNFRHQQFNTMPKQAGVTASNWLSIDCGSLSYDRTPEIIRVREDLM*
Ga0133913_105022191	3300010885	Freshwater Lake	MQSNFRHQLFNTMPKQVGVIASYWSAINSGSLSSLDRTPEIIR
Ga0133913_113247324	3300010885	Freshwater Lake	MQSNVKHQQFNTMPKLAGVIASGWSTINCGSLSYDRTPEIRRVREDVV*
Ga0138270_10823631	3300012771	Freshwater Lake	MQSNFRHQLFNTMPKQAGIIACSWSSINGGSLSYDRTPEI
Ga0138284_13871991	3300012779	Freshwater Lake	MQSNFRHQQFNTMPKLAGFIASGWSTINCGSLSYDRTP
Ga0164293_101053813	3300013004	Freshwater	MQIVARHQQFNAMPKQAGFIASNWLSIECGSLSYDRTPEITRVREGWNG*
Ga0164296_10240584	3300013093	Freshwater	MQSNFRHQQFNTMPKQAGVIACSWSAINSGSLSYDRTPEINSRVREDIL*
Ga0136642_10007883	3300013285	Freshwater	MQSNFRQHQFNTMPKQVGVIASCWSAINLDSLSYDRTPEITRVREGWDG*
Ga0136642_10094541	3300013285	Freshwater	MQSCNRHHQFNTMPKQVGVIASYWLSINAGSLSSLDRTPEIIGVQEGWDG*
Ga0136642_10245384	3300013285	Freshwater	MQSCNRHHQFNTMPKQVGVIASYWSAINAGSLSSLDRTPEI
Ga0136641_12145091	3300013286	Freshwater	MQSNFRHQLFNTMPKQAGVIASYWSAINGGSLSLD
Ga0177922_109264191	3300013372	Freshwater	MQSTVKHQQFNTMPKLAGVIACSWLSINGGSLSYDRTPEISRVRETVV*
Ga0181356_12491571	3300017761	Freshwater Lake	MQSCNRHHQFNTMPKQVGVIASYWLSINAGSLSSLDR
Ga0211736_103827121	3300020151	Freshwater	MQSNFRHQQFNTMPKLAGVIACSWLSINAGSLSYDRTPEIRRVREGWDG
Ga0211726_109392775	3300020161	Freshwater	MQSNFRHQQFNTMPKQAGVIACGWLSINAGSLSYDRTPEITRVREAVM
Ga0211729_110883314	3300020172	Freshwater	MQSFNRHQQFNTMPKQAGVIASNWSTIDCGSLSYDRTPEITRVREDIM
Ga0211731_111943013	3300020205	Freshwater	MQSNFRHQQFNTMPKQAGLIASNWSTINGGSLSYDRTPESYTRVPETVM
Ga0211731_115078593	3300020205	Freshwater	MQSNFRHQQFNTMPKLAGVIACSWLSINGGSLSYDRTPEIR
Ga0211731_117135981	3300020205	Freshwater	MQSTVKHQQFNTMPKLAGVIACSWLSINGGSLSYDRTPEIRRVREGWDG
Ga0214170_10099031	3300020731	Freshwater	MQSNFRHQQFNTMPKQAGVIACSWSAINSGSLSYDRTPEIN
Ga0214165_10273581	3300021137	Freshwater	MQSNFRQHQFNWMPKQVGVIASYWSAIDCGSLLSLDRTPEINSRVREDMM
Ga0214166_10005791	3300021139	Freshwater	MQSNFRQHQFNWMPKQVGVIASYWSAINCGSLLSLD
Ga0214192_10547672	3300021142	Freshwater	MQSNVRHQQFNTMPKLAGVIASNWSAINGGSLSLDRTPEIYTGVRE
Ga0214192_11514911	3300021142	Freshwater	MQSNFRHQQFNTMPKQAGVIACSWSAINSGSLSYDRTPEINSR
Ga0213922_11255121	3300021956	Freshwater	MQSFNRHQQFNTMPKQAGVIASNWLSIECGSLSYDRTPE
Ga0222646_10143912	3300022822	Saline Water	MQSFNRQHTFNTMPKQLGVIASGWSAINCESLSYDRTPEITRVREGWDG
Ga0244775_1002980311	3300024346	Estuarine	MLGKHMQSNFKHQLFNTMPKQAGVIACSWLSINSGSLSYDRTPEINRVQEDIV
Ga0244775_100718642	3300024346	Estuarine	MQNIARHQQFNTMPKQAGVIASNWLSIDCGSLSYDRTPEITRVREGLM
Ga0208504_10009831	3300025358	Freshwater	MQSNVRHQQFNTMPKLAGVIASNWSAINGGSLSLDRTPEIYTRVREGWDD
Ga0208382_10451272	3300025369	Freshwater	MQSNFRQHQFNTMPKQVGVIASYWSAINGGSLSSLD
Ga0208738_10040615	3300025379	Freshwater	MQSNFRQHQFNTMPKQVGVIASYWSAINGGSLSYDRTPEINSRVREDIM
Ga0208250_100020224	3300025383	Freshwater	MQSNFRQHQFNWMPKQVGVIASYWSAINCGSLLSLDRTPEITRVREDMM
Ga0208250_10025785	3300025383	Freshwater	MQSSFKHQQFNTMPKLAGVIACSWSAINGGSLSYDRTPEINSRVREDIL
Ga0208257_10242523	3300025389	Freshwater	MQSNFRQHQFNWMPKQVGVIASYWSAINCGSLLSLDRTPEITRVRE
Ga0207958_10200341	3300025421	Freshwater	MQSNFRQHQFNTMPKQVGVIASYWSAINSGSLLSLDRTPEINS
Ga0208500_10076453	3300025429	Freshwater	MQSNFKHQQFNTMPKLAVVIACSWSAINGGSLSYDRTPEINS
Ga0208622_10425412	3300025430	Freshwater	MQSNHRHQFNTMPKLAGVIACSWSAINSGSLSYDRT
Ga0208622_10674921	3300025430	Freshwater	MQSNVRHQQFNTMPKLAGVIASNWSAINGGSLSLDRTPEIYT
Ga0208770_10788242	3300025438	Saline Lake	QSFNRQHTFNTMPKQLGVIASGWSAINCESLSYDRTPEITRVREGWDG
Ga0208497_10404571	3300025466	Freshwater	MQSSFKHQQFNTMPKLAGVIACSWSAINGGSLSYDRTPEINSR
Ga0208379_10002483	3300025598	Freshwater	MQSNFKHQQFNTMPKLAGVIACSWSAINGGSLSYDRTPEINSRVREDIL
Ga0208741_101202141	3300025723	Freshwater	MQSNFKHQQFNTMPKLAGVIACSWSAINGGSLSYD
Ga0208104_100007619	3300025773	Freshwater	MQSNFRQHQFNWMPKQVGVIASYWSAIDCGSLLSLDRTPEINSRVREDTL
Ga0208388_10101343	3300025778	Freshwater	MQSNFRQHQFNTMPKQVGVIASYWSAINGGSLSLDRTPEIN
Ga0208974_101310013	3300027608	Freshwater Lentic	MQSTVKHQQFNTMPKLAGVIACSWLSINGGSLSYDRTPEIRRVREGWDD
Ga0208133_10081195	3300027631	Estuarine	MQNIARHQQFNTMPKQAGVIASNWLSIDCGSLSYDRTPEITRVREDLM
Ga0209135_10041663	3300027642	Freshwater Lake	MQSNVKHQQFNTMPKLAGFIASGWLAINCGSLSYDRTPEIRRVRETVV
Ga0209135_10221684	3300027642	Freshwater Lake	MQSTVKHQQFNTMPKLAGVIACSWLSINGGSLSYDRTPEIRRVRETVM
Ga0209085_13603562	3300027741	Freshwater Lake	MQSTVKHQQFNTMPKLAGFIASGWSMINCGSLSYDR
Ga0209088_102694511	3300027763	Freshwater Lake	MQSNFKHQQFNAMPKQAGLIASNWSTIDCGSLSYD
Ga0209500_100209803	3300027782	Freshwater Lake	MQSNVKHQQFNTMPKLAGLIASGWLAINCGSLSYDRTPEIRRVRETVV
Ga0209246_102237072	3300027785	Freshwater Lake	EKGLKRKKMQSNVKHQQFNTMPKLAGFIASGWLAINCGSLSYDRTPEIRRVRETVV
Ga0209107_1000143820	3300027797	Freshwater And Sediment	MQSNVRHQQFNTMPKLAGVIACSWLSINGGSLSYDRTPEISRVRETV
Ga0304730_100379626	3300028394	Freshwater Lake	MQSNFRHQQFNTMPKLAGVIASGWSTINCGSLSYDRTPEIRRVREDVV
Ga0315899_107445931	3300031784	Freshwater	MQSFNRHQQFNTMPKLAGVIACSWLSINGGSLSYDRTPEISRVREDIV
Ga0315903_100867891	3300032116	Freshwater	MQSFNRHQQFNTMPKQAGVIACAWLSINAGSLSYDRTPE
Ga0316230_10055331	3300032668	Freshwater	MQSNFRQHQFNTMPKQVGVIASYWSAINGGSLSLDRAPEINSRVREDI
Ga0316224_10539864	3300032753	Freshwater	MQSKVRHQHFNTMPKQVGVIASYWSAIDCGSLLSLDRTPEISRV
Ga0334992_0003150_3313_3462	3300033992	Freshwater	MQSNFRHQQFNTMPKQAGFNASNWLSIECGSLSYDRTPEITRVREGWDG
Ga0334992_0006394_5046_5192	3300033992	Freshwater	MQSFNRHQQFNTMPKQAGVIASNWSTIDCGSLSYDRTPEITRVREDLM
Ga0335003_0005773_6189_6314	3300033995	Freshwater	QQFNTMPKQAGVIASNWSTIDCGSLSYDRTPEITRVREDLM
Ga0335020_0000046_30808_30954	3300034082	Freshwater	MQSSNRHQQFNTMPKQVGVIACGWLSINAGSLSYDRTPEISRVRRTVV
Ga0335020_0034468_2607_2747	3300034082	Freshwater	MQSNFRHQQFNTMPKQAGFNASNWLSIECGSLSYDRTPEITRVREGW
Ga0335012_0459925_3_116	3300034093	Freshwater	MQIVARHQQFNAMPKQAGFIASNWLSIECGSLSYDRTP
Ga0335022_0006517_1391_1537	3300034095	Freshwater	MQSFNRHQQFNTMPKQAGVIASNWSTIDCGSLSYDRTPEITRVREAVM
Ga0335035_0026545_3750_3860	3300034105	Freshwater	MQSFNRHQFNTMPKQAGVIACGWLSINAGSLSYDRTP
Ga0335035_0040657_2952_3083	3300034105	Freshwater	MQSNFRHQQFNTMPKQAGFNASNWLSIECGSLSYDRTPEITRVR
Ga0335007_0263494_1044_1151	3300034283	Freshwater	MQNIARHQQFNTMPKQAGVIASNWSTIDCGSLSYDR
Ga0335048_0015636_5320_5457	3300034356	Freshwater	FNRHQQFNTMPKQAGVIASNWSTIDCGSLSYDRTPEITRVREDLM
Ga0335048_0017625_2_136	3300034356	Freshwater	MQSFNRHQQFNTMPKQAGVIASNWSTIDCGSLSYDRTPEITRVRE
Ga0335048_0140860_1_126	3300034356	Freshwater	MQSSNRHQQFNTMPKQVGVIACGWLSINAGSLSYDRTPEISR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F065391

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences