Metagenome / Metatranscriptome Family F065370

Basic Information
Family ID	F065370
Family Type	Metagenome / Metatranscriptome
Number of Sequences	127
Average Sequence Length	85 residues
Representative Sequence	MTTMNDSMMPIQGATVMTADHERLGTVKEIAGDCFKVDAPMAPDYWLASDTIATINGENIMLRFRREEINDLKMGIPDSHTGIHRHAA
Number of Associated Samples	58
Number of Associated Scaffolds	127

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	88.98 %
% of genes near scaffold ends (potentially truncated)	40.94 %
% of genes from short scaffolds (< 2000 bps)	99.21 %
Associated GOLD sequencing projects	57
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.62

Most Common Taxonomy
Group	Unclassified (88.189 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (36.221 % of family members)
Environment Ontology (ENVO)	Unclassified (38.583 % of family members)
Earth Microbiome Project Ontology (EMPO)	Unclassified (37.008 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 11.21% β-sheet: 26.72% Coil/Unstructured: 62.07%
Feature Viewer

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Pfam ID	Name	% Frequency in 127 Family Scaffolds
PF00723	Glyco_hydro_15	4.72

COG ID	Name	Functional Category	% Frequency in 127 Family Scaffolds
COG3387	Glucoamylase (glucan-1,4-alpha-glucosidase), GH15 family	Carbohydrate transport and metabolism [G]	4.72

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	88.19 %
All Organisms	root	All Organisms	11.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	88.19 %
cellular organisms	root	All Organisms → cellular organisms	11.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	88.19 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	11.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	88.19 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	3.15 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	3.15 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	88.19 %
Holophagae	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Holophagae	3.15 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1.57 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	88.19 %
unclassified Holophagae	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Holophagae → unclassified Holophagae	3.15 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	1.57 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	88.19 %
Holophagae bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Holophagae → unclassified Holophagae → Holophagae bacterium	3.15 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1.57 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300003162\|Ga0006778J45830_1079698	All Organisms → cellular organisms → Bacteria	580	Open in IMG/M
3300004156\|Ga0062589_102883758	Not Available	502	Open in IMG/M
3300004798\|Ga0058859_11607144	Not Available	643	Open in IMG/M
3300004801\|Ga0058860_12000452	Not Available	575	Open in IMG/M
3300004801\|Ga0058860_12032361	Not Available	644	Open in IMG/M
3300005354\|Ga0070675_100639284	Not Available	966	Open in IMG/M
3300005544\|Ga0070686_101529508	All Organisms → cellular organisms → Bacteria	563	Open in IMG/M
3300005840\|Ga0068870_10852059	All Organisms → cellular organisms → Bacteria	640	Open in IMG/M
3300006038\|Ga0075365_10674917	Not Available	730	Open in IMG/M
3300006048\|Ga0075363_100657887	Not Available	631	Open in IMG/M
3300006051\|Ga0075364_10009222	All Organisms → cellular organisms → Bacteria	5912	Open in IMG/M
3300009094\|Ga0111539_10823518	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1080	Open in IMG/M
3300010085\|Ga0127445_1064763	All Organisms → cellular organisms → Bacteria → Acidobacteria → Holophagae → unclassified Holophagae → Holophagae bacterium	540	Open in IMG/M
3300010126\|Ga0127482_1035556	Not Available	520	Open in IMG/M
3300010133\|Ga0127459_1015351	Not Available	530	Open in IMG/M
3300010137\|Ga0126323_1180649	Not Available	603	Open in IMG/M
3300010146\|Ga0126320_1367840	Not Available	587	Open in IMG/M
3300010147\|Ga0126319_1129586	Not Available	567	Open in IMG/M
3300010147\|Ga0126319_1593735	Not Available	593	Open in IMG/M
3300010154\|Ga0127503_10930553	Not Available	586	Open in IMG/M
3300010399\|Ga0134127_13077243	All Organisms → cellular organisms → Bacteria	544	Open in IMG/M
3300010399\|Ga0134127_13229718	Not Available	533	Open in IMG/M
3300010400\|Ga0134122_11709512	Not Available	657	Open in IMG/M
3300010401\|Ga0134121_11627266	All Organisms → cellular organisms → Bacteria	666	Open in IMG/M
3300011332\|Ga0126317_10009517	Not Available	605	Open in IMG/M
3300011332\|Ga0126317_10160497	Not Available	622	Open in IMG/M
3300011332\|Ga0126317_11091698	Not Available	572	Open in IMG/M
3300012212\|Ga0150985_100402049	Not Available	519	Open in IMG/M
3300012212\|Ga0150985_101243101	All Organisms → cellular organisms → Bacteria	562	Open in IMG/M
3300012212\|Ga0150985_104051591	Not Available	619	Open in IMG/M
3300012212\|Ga0150985_104275484	All Organisms → cellular organisms → Bacteria → Acidobacteria → Holophagae → unclassified Holophagae → Holophagae bacterium	571	Open in IMG/M
3300012212\|Ga0150985_104822541	All Organisms → cellular organisms → Bacteria → Proteobacteria	816	Open in IMG/M
3300012212\|Ga0150985_108366482	All Organisms → cellular organisms → Bacteria → Acidobacteria → Holophagae → unclassified Holophagae → Holophagae bacterium	944	Open in IMG/M
3300012212\|Ga0150985_115167293	Not Available	591	Open in IMG/M
3300012212\|Ga0150985_115173198	Not Available	592	Open in IMG/M
3300012212\|Ga0150985_115179512	Not Available	605	Open in IMG/M
3300012212\|Ga0150985_115347358	Not Available	641	Open in IMG/M
3300012212\|Ga0150985_117170508	Not Available	548	Open in IMG/M
3300012212\|Ga0150985_119396177	Not Available	1328	Open in IMG/M
3300012212\|Ga0150985_120488395	Not Available	641	Open in IMG/M
3300012371\|Ga0134022_1061423	Not Available	584	Open in IMG/M
3300012377\|Ga0134029_1085268	Not Available	537	Open in IMG/M
3300012380\|Ga0134047_1110557	Not Available	532	Open in IMG/M
3300012398\|Ga0134051_1201592	Not Available	559	Open in IMG/M
3300012469\|Ga0150984_101626389	Not Available	606	Open in IMG/M
3300012469\|Ga0150984_101833260	Not Available	670	Open in IMG/M
3300012469\|Ga0150984_113515967	Not Available	790	Open in IMG/M
3300012469\|Ga0150984_114043025	Not Available	606	Open in IMG/M
3300012469\|Ga0150984_115341427	Not Available	583	Open in IMG/M
3300015371\|Ga0132258_11408495	Not Available	1761	Open in IMG/M
3300015374\|Ga0132255_103743753	Not Available	646	Open in IMG/M
3300019254\|Ga0184641_1054700	Not Available	547	Open in IMG/M
3300019254\|Ga0184641_1169359	Not Available	529	Open in IMG/M
3300019254\|Ga0184641_1218545	Not Available	596	Open in IMG/M
3300019254\|Ga0184641_1314548	Not Available	583	Open in IMG/M
3300019254\|Ga0184641_1419050	Not Available	531	Open in IMG/M
3300019259\|Ga0184646_1436028	Not Available	519	Open in IMG/M
3300019263\|Ga0184647_1182615	Not Available	589	Open in IMG/M
3300019279\|Ga0184642_1254110	Not Available	546	Open in IMG/M
3300019279\|Ga0184642_1419561	Not Available	599	Open in IMG/M
3300019279\|Ga0184642_1637284	Not Available	597	Open in IMG/M
3300020069\|Ga0197907_10166391	Not Available	542	Open in IMG/M
3300020070\|Ga0206356_11221955	Not Available	582	Open in IMG/M
3300020077\|Ga0206351_10048443	Not Available	516	Open in IMG/M
3300020080\|Ga0206350_10711685	Not Available	571	Open in IMG/M
3300020080\|Ga0206350_10970089	Not Available	521	Open in IMG/M
3300020080\|Ga0206350_11100100	Not Available	537	Open in IMG/M
3300020080\|Ga0206350_11453590	Not Available	606	Open in IMG/M
3300020081\|Ga0206354_11613806	Not Available	541	Open in IMG/M
3300020082\|Ga0206353_11644818	Not Available	572	Open in IMG/M
3300021315\|Ga0179958_1123057	Not Available	555	Open in IMG/M
3300021951\|Ga0222624_1048540	Not Available	574	Open in IMG/M
3300021951\|Ga0222624_1346226	Not Available	551	Open in IMG/M
3300021951\|Ga0222624_1359498	Not Available	559	Open in IMG/M
3300021951\|Ga0222624_1359607	Not Available	552	Open in IMG/M
3300022195\|Ga0222625_1301608	Not Available	541	Open in IMG/M
3300022195\|Ga0222625_1311997	Not Available	521	Open in IMG/M
3300022195\|Ga0222625_1365606	Not Available	575	Open in IMG/M
3300027886\|Ga0209486_11218274	Not Available	517	Open in IMG/M
3300028812\|Ga0247825_10952510	Not Available	623	Open in IMG/M
3300030829\|Ga0308203_1054493	Not Available	613	Open in IMG/M
3300030829\|Ga0308203_1063824	Not Available	580	Open in IMG/M
3300030829\|Ga0308203_1066827	Not Available	571	Open in IMG/M
3300030829\|Ga0308203_1067963	Not Available	568	Open in IMG/M
3300030829\|Ga0308203_1070282	Not Available	561	Open in IMG/M
3300030829\|Ga0308203_1071371	Not Available	558	Open in IMG/M
3300030830\|Ga0308205_1045798	Not Available	572	Open in IMG/M
3300030830\|Ga0308205_1047926	Not Available	564	Open in IMG/M
3300030902\|Ga0308202_1031489	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	896	Open in IMG/M
3300030902\|Ga0308202_1055069	Not Available	739	Open in IMG/M
3300030902\|Ga0308202_1101155	Not Available	596	Open in IMG/M
3300030902\|Ga0308202_1105877	Not Available	586	Open in IMG/M
3300030902\|Ga0308202_1113306	Not Available	573	Open in IMG/M
3300030902\|Ga0308202_1138593	Not Available	533	Open in IMG/M
3300030902\|Ga0308202_1156004	Not Available	511	Open in IMG/M
3300030903\|Ga0308206_1103339	Not Available	641	Open in IMG/M
3300030903\|Ga0308206_1138212	Not Available	577	Open in IMG/M
3300030903\|Ga0308206_1139961	Not Available	575	Open in IMG/M
3300030903\|Ga0308206_1148142	Not Available	563	Open in IMG/M
3300030903\|Ga0308206_1152192	Not Available	558	Open in IMG/M
3300030903\|Ga0308206_1157503	Not Available	551	Open in IMG/M
3300030903\|Ga0308206_1173432	Not Available	532	Open in IMG/M
3300030903\|Ga0308206_1173741	Not Available	532	Open in IMG/M
3300030905\|Ga0308200_1095405	Not Available	626	Open in IMG/M
3300030905\|Ga0308200_1132675	Not Available	561	Open in IMG/M
3300030993\|Ga0308190_1124249	Not Available	589	Open in IMG/M
3300031054\|Ga0102746_10851323	Not Available	591	Open in IMG/M
3300031058\|Ga0308189_10035807	Not Available	1291	Open in IMG/M
3300031058\|Ga0308189_10341073	All Organisms → cellular organisms → Bacteria → Proteobacteria	600	Open in IMG/M
3300031058\|Ga0308189_10379016	Not Available	578	Open in IMG/M
3300031082\|Ga0308192_1064301	Not Available	574	Open in IMG/M
3300031091\|Ga0308201_10304687	Not Available	569	Open in IMG/M
3300031092\|Ga0308204_10225081	Not Available	596	Open in IMG/M
3300031092\|Ga0308204_10230068	Not Available	592	Open in IMG/M
3300031092\|Ga0308204_10235633	Not Available	587	Open in IMG/M
3300031092\|Ga0308204_10236540	Not Available	586	Open in IMG/M
3300031092\|Ga0308204_10236626	Not Available	586	Open in IMG/M
3300031092\|Ga0308204_10238362	Not Available	584	Open in IMG/M
3300031092\|Ga0308204_10239197	Not Available	583	Open in IMG/M
3300031092\|Ga0308204_10256078	All Organisms → cellular organisms → Bacteria → Acidobacteria → Holophagae → unclassified Holophagae → Holophagae bacterium	569	Open in IMG/M
3300031092\|Ga0308204_10258136	Not Available	568	Open in IMG/M
3300031092\|Ga0308204_10266291	Not Available	561	Open in IMG/M
3300031092\|Ga0308204_10311937	Not Available	530	Open in IMG/M
3300031093\|Ga0308197_10316136	Not Available	581	Open in IMG/M
3300031093\|Ga0308197_10429989	Not Available	524	Open in IMG/M
3300031093\|Ga0308197_10450156	Not Available	516	Open in IMG/M
3300031114\|Ga0308187_10453860	Not Available	518	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	76.38%
Host-Associated	Host-Associated	23.62%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	56.69%
Plants	Host-Associated → Plants	21.26%
Aquatic	Environmental → Aquatic	19.68%
Human	Host-Associated → Human	2.36%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	56.69%
Freshwater	Environmental → Aquatic → Freshwater	19.68%
Rhizoplane	Host-Associated → Plants → Rhizoplane	12.60%
Rhizosphere	Host-Associated → Plants → Rhizosphere	6.30%
Digestive System	Host-Associated → Human → Digestive System	2.36%
Roots	Host-Associated → Plants → Roots	2.36%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	55.91%
Sediment	Environmental → Aquatic → Freshwater → Sediment	13.39%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	11.81%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	6.30%
Soil	Host-Associated → Plants → Rhizosphere → Soil	5.51%
Large Intestine	Host-Associated → Human → Digestive System → Large Intestine	2.36%
Bulk Soil	Host-Associated → Plants → Roots → Bulk Soil	2.36%
Loam	Environmental → Terrestrial → Soil → Loam	0.79%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	0.79%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	0.79%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	52.76%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	13.39%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	11.81%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	6.30%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	5.51%
Fecal	Host-Associated → Human → Digestive System → Large Intestine → Fecal	2.36%
Unclassified	Host-Associated → Plants → Roots → Bulk Soil → Unclassified	2.36%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.57%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	0.79%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	0.79%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	0.79%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	0.79%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	0.79%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	36.22%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	13.39%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	10.24%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	7.09%
Soil	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil	6.30%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	5.51%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	4.72%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	3.15%
Host-Associated	Host-Associated → Human → Digestive System → Large Intestine → Fecal → Host-Associated	2.36%
Populus Endosphere	Host-Associated → Plants → Roots → Bulk Soil → Unclassified → Populus Endosphere	2.36%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.57%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	0.79%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.79%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.79%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.79%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	0.79%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.79%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.79%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.79%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.79%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300003162	Avena fatua rhizosphere microbial communities - H4_Rhizo_Litter_21 (Metagenome Metatranscriptome, Counting Only)	Host-Associated	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300004798	Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - roots SR-2 (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M
3300004801	Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - roots SR-3 (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M
3300005354	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG	Host-Associated	Open in IMG/M
3300005544	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG	Environmental	Open in IMG/M
3300005840	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2	Host-Associated	Open in IMG/M
3300006038	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5	Host-Associated	Open in IMG/M
3300006048	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3	Host-Associated	Open in IMG/M
3300006051	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4	Host-Associated	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300010085	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Wat_40_2_0_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010126	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_40_2_0_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010133	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Wat_40_5_8_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010137	Soil microbial communities from California, USA to study soil gas exchange rates - SR-CA-SC1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010146	Soil microbial communities from California, USA to study soil gas exchange rates - JR-CA-SND metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010147	Soil microbial communities from California, USA to study soil gas exchange rates - BB-CA-RED metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010154	Soil microbial communities from Willow Creek, Wisconsin, USA - WC-WI-TBF metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300011332	Soil microbial communities from California, USA to study soil gas exchange rates - SR-CA-SC2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012371	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_20cm_2_0_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012377	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_20cm_2_8_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012380	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_2_0_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012398	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_2_24_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300019254	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_5 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019259	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019263	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_5 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019279	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300020069	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-2 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300020070	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-1 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300020077	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-1 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300020080	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-4 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300020081	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-3 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300020082	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300021315	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad1_2_06_16RNAfungal (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300021951	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300022195	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300027886	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost (SPAdes)	Environmental	Open in IMG/M
3300028812	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Vanillin_Day48	Environmental	Open in IMG/M
3300030829	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_357 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030830	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_368 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030902	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_356 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030903	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_369 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030905	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_204 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030993	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_185 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031054	Forest soil microbial communities from USA, for metatranscriptomics studies - Jemez Pines PI 1C (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031058	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_184 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031082	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_193 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031091	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_355 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031092	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_367 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031093	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_198 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031114	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_182 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0006778J45830_10796982	3300003162	Avena Fatua Rhizosphere	MTTMNDSMMPIQGGNVVTADGERLGTVKEIVGDCFKVDAPMAPDYWLASDTIATVMGNDITLRIRRDDINEVKMGMPDSHTGIHRHAA*
Ga0062589_1028837581	3300004156	Soil	MTTMNDSMMPIQGANVLTADHERLGTVKEIMGDCFKVDAPMAPDYWLASDTIATMESGNILLRFRREDINDL
Ga0058859_116071442	3300004798	Host-Associated	MNDSMMPIQGANVLTADHERLGTVKEIMGDCFKVDAPLAPDYWLASDTIATMESGNILLRFRREDINDLKMGIPDKHTGIHRHAA*
Ga0058860_120004521	3300004801	Host-Associated	MTTMNDSMMPIQGANVLTADHERLGTVKEIMGDCFKVDAPLAPDYWLASDTIATMESGNILLRFRREDINDLKMGIPDKHTGIHRHAA*
Ga0058860_120323612	3300004801	Host-Associated	MTTMNDSMMPIQGANVLTADRERLGSVKEIVGDCFKIDAPMAPDYWLASDTIATINGENIMLRFRREEINDLKMGMPDSHTGVHRHAA*
Ga0070675_1006392842	3300005354	Miscanthus Rhizosphere	MTTMNDSMMPIQGANVLTADRERLGSVKEIVGDCFKIDAPMAPDYWLASDTIATINGENIVLRFRREEINDLKMGMPDSHTGVHRHAA*
Ga0070686_1015295081	3300005544	Switchgrass Rhizosphere	MPIQGANVLTADRERLGSVKEIVGDCFKIDAPMAPDYWLASDTIATINGENIMLRFRREEINDLKMGMPDSHTGVHRHAA*
Ga0068870_108520592	3300005840	Miscanthus Rhizosphere	MTTMNDSMMPVNGAKVMTADHESLGTVKEIIGDCFKVDAPMAPDYWLASDTIATMDGNDIILRVRREEINDLKVDMPDSHTGVHRHAA*
Ga0075365_106749172	3300006038	Populus Endosphere	MTTMNDSMMPIQGATVMTADHERLGTVKEISGDCFKVDAPMAPDYWLASDSIATISGNDILLRFIRKDINDLK
Ga0075363_1006578871	3300006048	Populus Endosphere	MTTMNDSMRPIQGATVMTADQEVIGKVKEIMGDCFKVDAPMAPDYWLGSDTIASASGESVLLRISRSDISDVK
Ga0075364_100092224	3300006051	Populus Endosphere	MTTMNDSMMPIQGATVMTADHERLGTVKEITGDCFKVDAPMAPDYWLASDTIASLSDGNILLRFKREDINDLKMGLPDNHTGIHRHAA*
Ga0111539_108235182	3300009094	Populus Rhizosphere	MTTMNDSMMPIQGATVMTADHERLGTVKEIAGDCFKVDAPMARDYWLASDTIATVTGNDILLRIPREDIDNVKISEPESHTGIHRHAA*
Ga0127445_10647631	3300010085	Grasslands Soil	MTTMNDSMMPIQGGNVVTADGERLGTVKEIVGDCFKVDAPMAPDYWLASDTIATVMGNDITLRIRRDDINEVKMGMPDSHTG
Ga0127482_10355562	3300010126	Grasslands Soil	MNDSMMPIQGANVLTADHERLGTVKEIMGDCFKVDAPLAPDYWLASDTIATMESGNILLRFRRDDINDMKMGIP
Ga0127459_10153512	3300010133	Grasslands Soil	MTTMNDSMMPIEGASVVTADHEILGTVKEIVGDCFKVDAPLAPDYWLASDSIATSTGDSVILRFRREDINDVKMGLPDHHTGIHRH
Ga0126323_11806492	3300010137	Soil	MTTMNDSMMPIQGANVLTVDHEHLGTIKETAGDCFKIDAPMAPDYWLASDTIATMEGESVILRFRRDEINDLKMGVPDSHSGIHRLAA*
Ga0126320_13678402	3300010146	Soil	MNDSMMPIQGANVLTADHERLGTVKEIMGDCFKVDAPLAPDYWLASDTIATMESGNILLRFRRDDINDMKMGIPDKHTGIHRHAA*
Ga0126319_11295862	3300010147	Soil	MTTMNDSMMPIQGANVMTSDRERLGTVKEIVGDCFKIDAPMAPDYWLASDTIASVMGNDITLRIGRDDIGDVKMGEPDTHSGIHRH
Ga0126319_15937351	3300010147	Soil	MNDSMMPIQGANVLTADHERLGTVKEIMGDCFKVDAPLAPDYWLASDTIATMEAGNILLRFRRDDINDLKMGIPDKHTGIHRHAA*
Ga0127503_109305532	3300010154	Soil	MTTMNDSMMPIQGANVMTADREKLGSVKEILGDCFKVDAPMAPDYWLASDTIATMDGKDIMLRFRREEINDLKMGMPDTHTGVHRHAA*
Ga0134127_130772432	3300010399	Terrestrial Soil	VLTADRERLGSVKEIVGDCFKIDAPMAPDYWLASDTIATINGENIMLRFRREEINDLKMGMPDSHTGVHRHAA*
Ga0134127_132297181	3300010399	Terrestrial Soil	MNDSMMPIQGANVLTADHERLGTVKEIMGDCFKVDAPMAPDYWLASDTIATMESGNILLRFRREDINDLKMGIPDKHTGIHRHAA*
Ga0134122_117095121	3300010400	Terrestrial Soil	MNDSMMPIQGANVLTADHERLGTVKEIMGDCFKVDAPMAPDYWLASDSIATITGDNILLRFVRKDINDLKMGIPDQHTGIHRHAA*
Ga0134121_116272661	3300010401	Terrestrial Soil	IEGSTTMTTMNDSMMPIQGANVLTADHERLGTVKEIMGDCFKVDAPMAPDYWLASDTIATMESGNILLRFRREDINDLKMGIPDKHTGIHRHAA*
Ga0126317_100095172	3300011332	Soil	MTTMNDSMMPIQGANVLTADRERLGSVKEIVGDCFKVDAPMAPDYWLASDTIATINGENIMLRFRREEIDDLKVDMPEDHKGIHRHAA*
Ga0126317_101604972	3300011332	Soil	MTTMNDSMMPIQGANVMTSDNEKLGTVKEIMGNCFKIDAPMAPDYWLASDTIATISGENILLRFKRDDINDMKMGIPDQHTGIHRHAA*
Ga0126317_110916982	3300011332	Soil	MTTMNDSMMPIQGANVMTSDHERLGSVKEIIGDCFKIDAPMAKDYWLASDTIATITGDNILLRYKREDIDDVKMGKPDDHTGIHSHAA
Ga0150985_1004020492	3300012212	Avena Fatua Rhizosphere	MTTMNDSMMPIQGANVMTSDHERLGTVKEIVGDCFKIDAPMAPDYWLASDTIASVMGNDITLRIRRDDIGNVKMGEPDTHSGIHRHAA*
Ga0150985_1012431011	3300012212	Avena Fatua Rhizosphere	MTTMNDSMMPIRGATVMTADHEKLGTVKEITGDCFKVDAPMAPDYWLASDSIASINGDDILLRFVRKDIDDLKMGIPDQHTGIHRHAA*
Ga0150985_1040515912	3300012212	Avena Fatua Rhizosphere	MTTMNDSMRPIQGANVLTADRERLGSVKEIMGDCFKVDAPMAPDYWLAADTIATINGENIMLRFRREEIDDLKVDMPDDHKGIHRHAA*
Ga0150985_1042754842	3300012212	Avena Fatua Rhizosphere	MTTMNDSMMPIQGATVMTADGERLGTVKEIVGDCFKVDAPMAPDYWLASDTIATVMGNEIKLRIRRDDINDVKMGMPDSHTGIHRHAA*
Ga0150985_1048225412	3300012212	Avena Fatua Rhizosphere	MTTMNDSMMPIQGANVMTSDHERLGSVKEIIGDCFKIDAPMAKDYWLASDTIATITGDNILLRYKREDIDDVKMGKPDDHTGIHSHAA*
Ga0150985_1083664822	3300012212	Avena Fatua Rhizosphere	MTTMNDSMMPIQGATVMTSDGERLGTVKEIVGDCFKVDAPMAPDYWLASDTIATMTRDDIRLRIRRDDINEVKMGMPDSHTGIHRHAA*
Ga0150985_1151672932	3300012212	Avena Fatua Rhizosphere	MTTMNDSMMPIQGATVMTADHERLGKVKEISGDCFKIDAPMAPDYWLASDSIETISGDNILLRFVRKDINDMKMGIPDEHTGIHRHAA*
Ga0150985_1151731982	3300012212	Avena Fatua Rhizosphere	MTTMNDSMMPIQGATVMTADHERLGTVKEITGDCFKVDAPMAPDYWLASDTIASMSGNDILLRFKREDINDLKMGIPDQHTGIHRHAA*
Ga0150985_1151795122	3300012212	Avena Fatua Rhizosphere	MTTMNDSMMPIQGATVMTADHERLGTVKEISGDCFKVDAPMAPDYWLASDSIATMSGNDILLRFVRKDINDLKMGIPDHHTGIHRHAA*
Ga0150985_1153473582	3300012212	Avena Fatua Rhizosphere	MTTMNDSMMPVQGHNVMTADHNRLGSVKEISGDCFKIDAPMAPDYWLASDTIASISGKDIMLSVLKKDIDDVKMGIPDQHTGVHRHAA*
Ga0150985_1171705082	3300012212	Avena Fatua Rhizosphere	MTTMNDSMMPIQGATVMTSDHERLGTVKEIAGDCFKVDAPMAPDYWLASDSIATMTGDNILLRFKREDINDLKMGIPDQHTGIHRHAA*
Ga0150985_1193961772	3300012212	Avena Fatua Rhizosphere	MMTTMNDSMMPIQGANVLTADRERLGSVKEIVGDCFKIDAPMAPDYWLASDTIATINGENIMLRFRREEINDLKMGMPDSHTGVHRHAA*
Ga0150985_1204883951	3300012212	Avena Fatua Rhizosphere	MTTMNDSMMPIQGANVITADRERLGSVKEIVGDCFKVDAPMAPDYWLASDTIATINGENIMLRFRREDIDDLKMGIPDSHTGIHRHAA*
Ga0134022_10614232	3300012371	Grasslands Soil	MTTMNDSMMPIQGANVISADRERLGSVKEIVGDCFKIDAPMSRDYWLASDTIATINGDNIMLRFRREEIDDVKMDMPDSHTGVHRHAA*
Ga0134029_10852681	3300012377	Grasslands Soil	MTTMNDSMMPIQGANVLTADHERLGTVKEIMGDCFKVDAPLAPDYWLASDTIATMESGNILLRFRRDDINDMKMGIPDKHTGIHRHAA*
Ga0134047_11105571	3300012380	Grasslands Soil	MTTMNDSMMPIQGANVISSDKERLGSVKEIVGDCFKIDAPMSRDYWLASDTIATINGENIMLRFRREEIDDVKMDMPDSHTGVHRHAA*
Ga0134051_12015922	3300012398	Grasslands Soil	MTTMNDSMMPIQGANVISADRERLGSVKEIMGDCFKVDAPMSHYWLASDTIATINGDNIMLRFRREEIDDVKMDMPDSHTGVHRHAA*
Ga0150984_1016263892	3300012469	Avena Fatua Rhizosphere	MTTMNDSMMPIQGANVITADRERLGSVKEIMGDCFKVDAPMSQDYWLASDTIATINGDNIMLRFRREEISDVKMDMPDSHTGVHRHAA*
Ga0150984_1018332602	3300012469	Avena Fatua Rhizosphere	MTTMNDSMMPVQGHNVMTADHNRLGSVKEISGDCFKVDAPMAPDYWLASDTIASISGKDIMLSVLKKDIDDVKMGIPDQHTGVHRHAA*
Ga0150984_1135159672	3300012469	Avena Fatua Rhizosphere	MNDSMMPIQGATVMTADHERLGTVKEISGDCFKVDAPMAPDYWLASDSIATISGNDILLRFVRKDINDLKMGIPDHHTGIHRHAA*
Ga0150984_1140430252	3300012469	Avena Fatua Rhizosphere	MTTMNDSMMPIQGATVMTADHERLGTVKEISGDCFKVDAPMAPDYWLASDSIATITGDNILLRFVRKDINDLKMGIPDHHTGIRRHAA*
Ga0150984_1153414272	3300012469	Avena Fatua Rhizosphere	MTTMNDSMMPIQGATVMTADHERLGTVKEIVGDCFKVDAPMAPDYWLASDTIATMSGDNILLRFMRQDINDLKIGIPDHHTGIHRHAA*
Ga0132258_114084951	3300015371	Arabidopsis Rhizosphere	MNDSMMPIQGANVLTADHERLGTVKEIMGDCFKVDAPMAPDYWLASDTIATMESGNILLRFRREDINDLKMGIP
Ga0132255_1037437532	3300015374	Arabidopsis Rhizosphere	SKRRRETMTTMNDSMMPIQGATVMTADHERLGTVKEIAGDCFKVDAPMARDYWLASDTIATVTGNDIMLRIPREDINNVKISEPESHTGIHRHAA*
Ga0184641_10547002	3300019254	Groundwater Sediment	MTTMNDSMMPIQGATVMTADRQSLGTVKEIKGDCFKVDAPMAPDYWLASDSIATMSGDNIMLRFRREEINGLKLGEPDDNH
Ga0184641_11693591	3300019254	Groundwater Sediment	MTTMNDSMMPIQGANVLSADHERLGSVKETMGDCFKIDAPMAPDYWLASDTIATITGDNILLRFKREDINDLKMGMPDQHTGIHRHAA
Ga0184641_12185452	3300019254	Groundwater Sediment	MTTMNDSMMPIHGANVITADRERLGSVKEIKGDCFKVDAPMAPDYWLGSDTIATIDGNDIMLRYRREDINDLKMGIPDNHTGIHRHAA
Ga0184641_13145482	3300019254	Groundwater Sediment	MMTTMNDSMMPIQGATVVTSDHEILGTVKEIVGDCFKVDAPLAPDYWLASDVIATSSGDSIILRLMKDDISDAKVGTPDHHTGVHRHAA
Ga0184641_14190502	3300019254	Groundwater Sediment	MTTMNDSMMPIQDANVMTADREMLGTVKEIIGDCFKVDAPMAPDYWLASDTIATINGENIMLRFRRDEIDDLKID
Ga0184646_14360281	3300019259	Groundwater Sediment	MTTMNDSMMPIQGATVMTADRERLGTVKEITGDCFKVDAPMAPDYWLASDTIATITGDHIMLRFRREDISDLKMGMPDKHTGIHRHAA
Ga0184647_11826152	3300019263	Groundwater Sediment	MTTMNDSMMPVNGAKVMTADRENLGTVKEITGDCFKVDAPMAPDYWLASDTIATMDGNDILLRFRREEINDLKVDMPDSHTGVHRHAA
Ga0184642_12541102	3300019279	Groundwater Sediment	MTTMNDSMMPIQGANVMTADHERLGSVKEIIGDCFKIDAPMAPDYWLASDTIATITGDNILLRFKREDINDLKMGIPDS
Ga0184642_14195611	3300019279	Groundwater Sediment	MTTMNDSMMPVQGATVMTADHERLGSVKEITGDCFKVDAPMAPDYWLASDTIATMEGKDIVLRFRREEINDLKMGIPDTHSGIHRHAA
Ga0184642_16372842	3300019279	Groundwater Sediment	MTTMNDSIMPIEGANVITADRERLGSVKEIMGDCFKVDAPMAPDYWLASDTIATINGENIMLRFRREEIGDVKMGMPNAHTGIHRHAA
Ga0197907_101663912	3300020069	Corn, Switchgrass And Miscanthus Rhizosphere	MTTMNDSMMPIQGANVLTADHERLGTVKEIMGDCFKVDAPLAPDYWLASDTIATMESGNILLRFRREDINDLKMGIPDK
Ga0206356_112219551	3300020070	Corn, Switchgrass And Miscanthus Rhizosphere	MTTMNDSMMPIQGANVLTADHERLGTVKEIMGDCFKVDAPLAPDYWLASDTIATMESGNILLRFRREDINDLKMGIPDKHTGIHRHAA
Ga0206351_100484432	3300020077	Corn, Switchgrass And Miscanthus Rhizosphere	MTTMNDSMMPIQGANVLTADHERLGTVKEIMGDCFKVDAPLAPDYWLASDTIATMESGNILLRFRREDIND
Ga0206350_107116851	3300020080	Corn, Switchgrass And Miscanthus Rhizosphere	MTTMNDSMMPIQGATVMTADHERLGTVKEISGDCFKVDAPMAPDYWLASDSIATISGNNILLRFIRKDINDLKMGIPDHHTGIHRHAA
Ga0206350_109700892	3300020080	Corn, Switchgrass And Miscanthus Rhizosphere	MTTMNDSMMPIRGADVLTADHEHLGKIKETTGDCFKVDAPMAPDYWLASDTIATMEGESVILRFRREEINDLKMG
Ga0206350_111001002	3300020080	Corn, Switchgrass And Miscanthus Rhizosphere	MTTMNDSKMPIQGATVMTADHERLGTVKEIIGDCFKVDAPMAPDYWLASDSIATIAGDNILLRFVRKDIDDLKVGAPDQHTG
Ga0206350_114535902	3300020080	Corn, Switchgrass And Miscanthus Rhizosphere	MTTMNDSMMPIQGANVLTADRERLGSVKEIVGDCFKIDAPMAPDYWLASDTIATINGENNMLRFRREEINDLKMGMPDSHTGVHRHAA
Ga0206354_116138062	3300020081	Corn, Switchgrass And Miscanthus Rhizosphere	MNDSMMPIQGANVLTADHERLGTVKEIMGDCFKVDAPMAPDYWLASDTIATMESGNILLRFRRDDINDLKMGIPDK
Ga0206353_116448182	3300020082	Corn, Switchgrass And Miscanthus Rhizosphere	MTTMNDSMMPIQGATVVTSDHEILGTVKEIVGDCFKVDAPLAPDYWLASDVIATSSGDSIILRLMKDDISDVKMGIPDHHTGLHRHAA
Ga0179958_11230572	3300021315	Vadose Zone Soil	MTTMNDSMMPIQGANVLTSDHERLGTVKEIIGDCFKIDAPMAPDYWLASDTIATTSGDSLILRFKRDDINDLKMGIPDQHTGIHRHAA
Ga0222624_10485402	3300021951	Groundwater Sediment	MTTMNDSMMPIQGATVMTADHERLGTVKEITGDCFKVDAPMAPDYWLASDTIATMTGNDILLRFKREDINDLKMGIPDQHTGIHRHAA
Ga0222624_13462262	3300021951	Groundwater Sediment	MTTMNDSMMPIQGATVMTADHERLGTVKEIAGDCFKVDAPMAPDYWLASDTIATINGENIMLRFRREEINDLKMGIPDSHTGIHRHAA
Ga0222624_13594982	3300021951	Groundwater Sediment	VTTMNDSMMPIQGATVMTADHERLGTVKEIAGDCFKVDAPMAPDYWLASDSIATITGDNILLRFVRKDINDLKMGIPDQHTGIHR
Ga0222624_13596071	3300021951	Groundwater Sediment	MTTMNDSMMPIQGGTVMTADRERLGMVKEIVGDCFKVDAPMAPDYWLASDTIATINGDNIMLRFRREEINGLKMGMPDTH
Ga0222625_13016082	3300022195	Groundwater Sediment	MTTMNDSMMPIQGGTVMTADRERLGMVKEIVGDCFKVDAPMAPDYWLASDTIATINGDNIMLRFRREEINGLKMGM
Ga0222625_13119972	3300022195	Groundwater Sediment	MTTMNDSLMPIQGATVMTAEHERLGSVKEIKGDCFKVDAPMAPDYWLASDTIATITGNDIMLRFRRDDINDLKMGIPDSHTGIHRHAA
Ga0222625_13656062	3300022195	Groundwater Sediment	MTTMNDSMMPIQGATVMTADRERLGTVKEIMGDCFKVDAPMAPDYWLASDTIAMISGGNIMLRFHREDIGDLKMGIPDSHTGIHRHAA
Ga0209486_112182741	3300027886	Agricultural Soil	MTTMNDSMMPIQGANVLTADREHLGSVKEIVGDCFKIDAPMAPDYWLASDTIATINGENIMLRFRREEINDLKVDMPDNHTGVHRHAA
Ga0247825_109525102	3300028812	Soil	MTTMNETNMPIQGGNVITADSERLGTVKEIMGDCFKIDAPMAPDYWLASDTIASITGDLIMLRFKKDDIDDLKLDMKDTHTGIHRHAA
Ga0308203_10544932	3300030829	Soil	MTTMNDSMMPIQGANVMTADRERLGSVKEIVGDCFKVDAPMAPDYWLASDTIATINGENIMLRFRREEINDLKMGIPDSHTGIHRHAA
Ga0308203_10638242	3300030829	Soil	MTTMNDSMMPIQGANVLTSDNERLGTVKEIIGDCFKIDAPMAPDYWLASDTIATTSGDSLILRFKRDDINGMKMGIPDQHTGIHRHAA
Ga0308203_10668272	3300030829	Soil	MTTMNDSMMPIHGANVITADRERLGSVKEIKGDCFKVDAPMAPDYWLGSDTIATIDGNDIMLRYRREDINDLKMGIPDSHTGIHRHAA
Ga0308203_10679632	3300030829	Soil	MTTMNDSMMPIQGATVMTADHERLGTVKEITGNCFKVDAPMAPDYWLASDTIATMTGNDILLRFKREDINDLKMGIPEQHTGIHRHAA
Ga0308203_10702821	3300030829	Soil	MTTMNDSTMPIQGANVLTADHERLGTVKEIMGDCFKVDAPLAPDYWLASDTIATMEAGNILLRFRRDDINDLKMGIPDKHTGIHRHA
Ga0308203_10713712	3300030829	Soil	VTTMNDSMMPIQGATVMTADHERLGTVKEIAGDCFKVDAPMAPDYWLASDSIATITGDNILLRFVRKDINDLKMGIPDHHTGIH
Ga0308205_10457982	3300030830	Soil	MTTMNDSMMPIQGGTVMTADRERLGSVKEIVGDCFKVDAPMAPDYWLASDTIATINGDNIMLRFRREEINGLKMGMPDTHTGIHRHA
Ga0308205_10479261	3300030830	Soil	MTTMNDSMMPIQGANVLSADHERLGSVKETMGDCFKIDAPMAPDYWLASDTIATITGDNILLRYKREDIDDVKMGKPDEHIGIHSH
Ga0308202_10314892	3300030902	Soil	MTTMNDSMMPIQGATVMTADHERLGTVKEITGDCFKVDAPMAPDYWLASDTIATITGNDILLRFKREDINDLKMGIPEQHTGIHRHAA
Ga0308202_10550692	3300030902	Soil	MTTMNDSMMPIQGATVITADHERLGTVKEIVGDCFKVDAPMAPDYWLASDSIATINGDNILLRFVRKDINDLKMGIPDQHTGIHRHAA
Ga0308202_11011552	3300030902	Soil	MTTMNDSMMPIQGANVMTSDRERLGTVKEIVGDCFKIDAPMAPDYWLASDTIASVMGNDITLRIRRDDIGNVKMGEPDTHSGIHRHAA
Ga0308202_11058772	3300030902	Soil	VTTMNDSMMPIQGATVMTADHERLGTVKEIAGDCFKVDAPMAPDYWLASDSIATITGDNILLRFVRKDINDLKMGIPDQHTGIHRHAA
Ga0308202_11133061	3300030902	Soil	MTTMNDSMMPIQGANVLTSDNERLGTVKEIIGDCFKIDAPMAPDYWLASDTIATTSGDSLILRFKRDDINDMKMGIPDQHTGIHRHAA
Ga0308202_11385932	3300030902	Soil	MTTMNDSMMPIQGATVMTADHERLGTVKEIIGECFKVDAPMAPDYWLASDSIATITGDNILLRFVRKDIDDVKMGK
Ga0308202_11560041	3300030902	Soil	MTTMNDSMMPIQGANVLTADHERLGTVKEIMGDCFKVDAPLAPDYWLASDTIATMEAGNILLRFRRDDINDLKMGIPDKHTGIHRHA
Ga0308206_11033392	3300030903	Soil	MTTMNDSMMPIQGGTVMTADRERLGMVKEIVGDCFKVDAPMAPDYWLASDTIATINGDNIMLRFRREEIDDLKMGMPNTHTGIHRHAA
Ga0308206_11382122	3300030903	Soil	MTTMNDSMMPIQGANVMTADREMLGTIKEIVGDCFKVDAPMAPDYWLASDTIATINGENIMLRFRRDEVNDLKVDTPDTHTGIHRHAA
Ga0308206_11399612	3300030903	Soil	MTTMNDSLMPVLGANVMTADHERLGTVKEIIGDCFKIDAPLAPDYWLASDTIASIDGDNVLLRFRRDDINDLKLGIPDNHTGIHRHAA
Ga0308206_11481422	3300030903	Soil	MTSINDSKMPIEGATVVTSDHEILGTVKEIEGDCFKIDAPMAPDYWLASDVIATSSGESIILRLMKDDISDAKMGGPDHHTGIHRH
Ga0308206_11521921	3300030903	Soil	MTTMNDSMMPIQGATVMTADRERLGTVKEIMGDCFKVDAPMAPDYWLASDTIAMISGGNIMLRFHREDIGDLKMGIPDSHTGIHR
Ga0308206_11575031	3300030903	Soil	MTTMNDSMMPIQGANVLTADHERLGTVKEIMGDCFKVDAPLAPDYWLASDTIATMEAGNILLRFRRDDINNLKMGIPDKHTGI
Ga0308206_11734322	3300030903	Soil	MTTMNDSMMPIQGATVMTADHERLGTVKEIIGECFKVDAPMAPDYWLASDTIATMSGNDILLRFKREDINDLKMG
Ga0308206_11737412	3300030903	Soil	MTTMNDSMMPIQGANVLSADHERLGSVKETMGDCFKIDAPMAPDYWLASDTIATITGDNILLRFKREDINDLKMGMPD
Ga0308200_10954052	3300030905	Soil	MTTMNDSMMPIQGATVMTADHERLGTVKEIIGECFKVDAPMARDYWLASDSIATITGDNILLRFVRKDIDDVKMGNPDEHTGIHRHAA
Ga0308200_11326751	3300030905	Soil	MTTMNDSMMPIQGANVLTADHERLGTVKEIMGDCFKVDAPLAPDYWLASDTIATMEAGNILLRFRRDDINDLKMGIPDKHTGIHRHAA
Ga0308190_11242492	3300030993	Soil	MTTMNDSMMPIQGATVMTADHERLGTVKEITGNCFKVDAPMAPDYWLASDTIATMTGNDILLRFKREDINDLKMGIPDQHTGIHRHAA
Ga0102746_108513232	3300031054	Soil	MTTMNDSMMPIQGANVMTADSESLGSVKEIIGSCFKVDAPMAPDYWLASDTIATITGDNILLRYKREDINDLKMGKPDDHTGIHRHAA
Ga0308189_100358072	3300031058	Soil	MTTMNDSMMPIQGATVMTADHERLGTVKEITGDCFKVDAPMAPDYWLASDTIATMTGNDILLRFKREDINDLKMGIPEQHTGIHRHAA
Ga0308189_103410731	3300031058	Soil	MTTMNDSMMPIQGATVMTADHERLGTVKEIIGECFKVDAPMAPDYWLASDSIATITGDNILLRFVRKDIDDVKMGKPDQHTGIHRHAA
Ga0308189_103790161	3300031058	Soil	MTTMNDSMMPIQGATVMTADHERLGTVKEIIGDCFKVDAPMAPDYWLASDSIAAISGDNILLRFVRKDINDLKMGIPDQHTGIHRHAA
Ga0308192_10643011	3300031082	Soil	MTTMNDSMMPIQGATVMTADHERLGTVKEITGDCFKVDAPMAPDYWLASDTIATITGDNILLRFVRKDIDDMKMGNPDEHTGIHRHAA
Ga0308201_103046871	3300031091	Soil	MTTMNDSMMPIQGANVLTADHERLGTVKEIMGDCFKVDAPLAPDYWLASDTIATMEAGNILLRFRRDDINNLKMGIPDKHTGIHRHE
Ga0308204_102250812	3300031092	Soil	MTTMNDSMMPIQGATVMTADHERLGTVKEITGNCFKVDAPMAPDYWLASDTIATMSGNDILLRFKREDINDLKMGTPDQHTGIHRHAA
Ga0308204_102300681	3300031092	Soil	MMTMNDSMMPIQGANVMTSDHERLGSVKEIIGNCFKIDAPMAKDYWLASDTIATINGENIMLRFRREEINDLKIDMPDTHTGIHRHAA
Ga0308204_102356332	3300031092	Soil	MTTMNDSMMPIQGATVMTADHERLGTVKEIIGDCFKVDAPMAPDYWLASDSIATITGDNILLRFVRKDIDDVKVGAPDEHTGIHRHAA
Ga0308204_102365402	3300031092	Soil	MTTMNDSMMPIQGANVMTADREMLGTIKEIVGDCFKVDAPMAPDYWLASDTIATINGENVMLRFRRDEVNDLKVDTPDTHTGIHRHAA
Ga0308204_102366262	3300031092	Soil	MTTMNDSMMPIRGANVLTVDHEHLGTIKETTGDCFKIDAPMAPDYWLASDTIATMEGESVILRFRRDEINDLKMGTPDSHSGIHRHAA
Ga0308204_102383621	3300031092	Soil	MTTMNDSMMPIQGANVLTSDHERLGTVKEIKGDCFKIDAPMAPDYWLASDTIATTSGDSLILRFKRDDINGMKMGIPDQHTGIHRHAA
Ga0308204_102391971	3300031092	Soil	MTTMNDSMMPIKGATVMTADRQSLGTVKEIKGDCFKVDAPMAPDYWLASDSIATMSGDNIMLRFRREEINDLKLGEPDDNHTGIHRHAA
Ga0308204_102560781	3300031092	Soil	MTTMNDQTMPVQGADVVTADHERLGTVKEVMGDCFKVDAPMAPDYWLATDTIAGITGGEILLRFRRDDIKDMKIGDPGEHTGFH
Ga0308204_102581362	3300031092	Soil	MTTMNDSMMPIQGATVMTADHERLGTVKEIIGECFKVDAPMAPDYWLASDSIATITGDNILLRFVRKDIDDVKMGNPDEHTGIHRHAA
Ga0308204_102662912	3300031092	Soil	MTTMNDSKMPIQGATVMTADHERLGTVKEIVGDCFKVDAPMAPDYWLASDSIATITGDNILLRFVRKDIDDLKVGAPDQHTGIH
Ga0308204_103119372	3300031092	Soil	MTTMNDSMMPIQGANVMTADRERLGSVKEIIGDCFKIDAPMAPDYWLASDTIATITSDNILLRFKREDINDLKM
Ga0308197_103161362	3300031093	Soil	MTTMNDSMMPIQGATVMTADRERLGSVKEIKGDCFKVDAPMAPDYWLASDTIATIDGNDIMLRFRREDINDLKKGIPDNHTGIHRHAA
Ga0308197_104299892	3300031093	Soil	MTTMNDSMMPIQGATVMTADHERLGTVKEIIGECFKVDAPMAPDYWLASDSIATITGDNILLRFVRKDIDDM
Ga0308197_104501562	3300031093	Soil	MTTMNDSMMPIQGANVLTSDHERLGTVKEIIGDCFKIDAPMAPDYWLASDTIATTSGDSLILRFKRDDINDMKMGIPD
Ga0308187_104538601	3300031114	Soil	MTTMNDSMMPIQGANVLSADHERLGSVKETMGDCFKIDAPMAPDYWLASDTIATITGDNILLRFKREDIND

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.62
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.62
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F065370

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


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