Metagenome / Metatranscriptome Family F065256

Basic Information
Family ID	F065256
Family Type	Metagenome / Metatranscriptome
Number of Sequences	128
Average Sequence Length	44 residues
Representative Sequence	ENDVPAGLLDGAWGDVAYMVAVSAQDGIMQLVARGAPPSTGKS
Number of Associated Samples	103
Number of Associated Scaffolds	128

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	0.00 %
% of genes near scaffold ends (potentially truncated)	99.22 %
% of genes from short scaffolds (< 2000 bps)	89.84 %
Associated GOLD sequencing projects	99
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.54

Most Common Taxonomy
Group	Bacteria (83.594 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (38.281 % of family members)
Environment Ontology (ENVO)	Unclassified (43.750 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (53.906 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 33.80% β-sheet: 0.00% Coil/Unstructured: 66.20%
Feature Viewer

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Pfam ID	Name	% Frequency in 128 Family Scaffolds
PF13793	Pribosyltran_N	50.78
PF14572	Pribosyl_synth	11.72
PF02668	TauD	7.03
PF01386	Ribosomal_L25p	3.91
PF14693	Ribosomal_TL5_C	3.12
PF16868	NMT1_3	2.34
PF01195	Pept_tRNA_hydro	2.34
PF01926	MMR_HSR1	1.56
PF00118	Cpn60_TCP1	0.78
PF00535	Glycos_transf_2	0.78
PF13432	TPR_16	0.78
PF01566	Nramp	0.78
PF10282	Lactonase	0.78
PF01713	Smr	0.78
PF01408	GFO_IDH_MocA	0.78

COG ID	Name	Functional Category	% Frequency in 128 Family Scaffolds
COG2175	Taurine dioxygenase, alpha-ketoglutarate-dependent	Secondary metabolites biosynthesis, transport and catabolism [Q]	7.03
COG1825	Ribosomal protein L25 (general stress protein Ctc)	Translation, ribosomal structure and biogenesis [J]	3.91
COG0193	Peptidyl-tRNA hydrolase	Translation, ribosomal structure and biogenesis [J]	2.34
COG0459	Chaperonin GroEL (HSP60 family)	Posttranslational modification, protein turnover, chaperones [O]	0.78
COG1914	Mn2+ or Fe2+ transporter, NRAMP family	Inorganic ion transport and metabolism [P]	0.78

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	83.59 %
Unclassified	root	N/A	16.41 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	83.59 %
Unclassified	root	N/A	16.41 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	83.59 %
Unclassified	root	N/A	16.41 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	66.41 %
Unclassified	root	N/A	16.41 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	1.56 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	64.84 %
Unclassified	root	N/A	16.41 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	0.78 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.78 %

Name	Rank	Taxonomy	Distribution
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	33.59 %
Unclassified	root	N/A	16.41 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	14.06 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1.56 %
Betaproteobacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Betaproteobacteria incertae sedis	0.78 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	0.78 %
Rhodobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	16.41 %
unclassified Rhodospirillales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales	14.84 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	14.06 %
Rhodovibrionaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhodovibrionaceae	1.56 %
Rhodospirillaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae	1.56 %
Neomegalonemataceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Neomegalonemataceae	0.78 %
unclassified Terriglobales	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales	0.78 %
Acetobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	0.78 %
Candidatus Accumulibacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Betaproteobacteria incertae sedis → Candidatus Accumulibacter	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	16.41 %
Rhodospirillales bacterium URHD0088	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	14.06 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	14.06 %
Fodinicurvata	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhodovibrionaceae → Fodinicurvata	1.56 %
Rhodospirillaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae	1.56 %
Rhodospirillales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium	0.78 %
Terriglobales bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Terriglobales bacterium	0.78 %
unclassified Candidatus Accumulibacter	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Betaproteobacteria incertae sedis → Candidatus Accumulibacter → unclassified Candidatus Accumulibacter	0.78 %
Acidocella	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Acidocella	0.78 %
Neomegalonema	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Neomegalonemataceae → Neomegalonema	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	16.41 %
Rhodospirillales bacterium URHD0088	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	14.06 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	14.06 %
Fodinicurvata sediminis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhodovibrionaceae → Fodinicurvata → Fodinicurvata sediminis	1.56 %
Rhodospirillaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae	1.56 %
unclassified Acidocella	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Acidocella → unclassified Acidocella	0.78 %
Candidatus Accumulibacter sp. SK-11	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Betaproteobacteria incertae sedis → Candidatus Accumulibacter → unclassified Candidatus Accumulibacter → Candidatus Accumulibacter sp. SK-11	0.78 %
Neomegalonema perideroedes	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Neomegalonemataceae → Neomegalonema → Neomegalonema perideroedes	0.78 %
Rhodospirillales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium	0.78 %
Terriglobales bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Terriglobales bacterium	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	16.41 %
Rhodospirillales bacterium URHD0088	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	14.06 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	14.06 %
Fodinicurvata sediminis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhodovibrionaceae → Fodinicurvata → Fodinicurvata sediminis	1.56 %
Rhodospirillaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae	1.56 %
Acidocella sp. 20-61-6	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Acidocella → unclassified Acidocella → Acidocella sp. 20-61-6	0.78 %
Candidatus Accumulibacter sp. SK-11	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Betaproteobacteria incertae sedis → Candidatus Accumulibacter → unclassified Candidatus Accumulibacter → Candidatus Accumulibacter sp. SK-11	0.78 %
Neomegalonema perideroedes	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Neomegalonemataceae → Neomegalonema → Neomegalonema perideroedes	0.78 %
Rhodospirillales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium	0.78 %
Terriglobales bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Terriglobales bacterium	0.78 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2189573000\|GPBTN7E01D4X5W	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	519	Open in IMG/M
3300004080\|Ga0062385_10916184	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	583	Open in IMG/M
3300004091\|Ga0062387_100783224	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	709	Open in IMG/M
3300004463\|Ga0063356_102213407	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	837	Open in IMG/M
3300004635\|Ga0062388_102363668	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	556	Open in IMG/M
3300005181\|Ga0066678_10212261	All Organisms → cellular organisms → Bacteria	1240	Open in IMG/M
3300005338\|Ga0068868_100842835	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	830	Open in IMG/M
3300005365\|Ga0070688_101135676	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Neomegalonemataceae → Neomegalonema → Neomegalonema perideroedes	626	Open in IMG/M
3300005471\|Ga0070698_100996798	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	785	Open in IMG/M
3300005545\|Ga0070695_100733134	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	787	Open in IMG/M
3300005764\|Ga0066903_103310526	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	870	Open in IMG/M
3300009093\|Ga0105240_11864668	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	626	Open in IMG/M
3300010048\|Ga0126373_11136037	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	847	Open in IMG/M
3300010048\|Ga0126373_11708111	All Organisms → cellular organisms → Bacteria	694	Open in IMG/M
3300010166\|Ga0126306_10106810	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	2031	Open in IMG/M
3300010361\|Ga0126378_10691510	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1132	Open in IMG/M
3300010366\|Ga0126379_11125319	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	891	Open in IMG/M
3300010376\|Ga0126381_100267432	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	2326	Open in IMG/M
3300010376\|Ga0126381_103390337	All Organisms → cellular organisms → Bacteria	627	Open in IMG/M
3300010376\|Ga0126381_103487190	Not Available	618	Open in IMG/M
3300010398\|Ga0126383_10244950	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	1754	Open in IMG/M
3300011270\|Ga0137391_10658917	Not Available	873	Open in IMG/M
3300012199\|Ga0137383_10399242	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1007	Open in IMG/M
3300012210\|Ga0137378_11031269	Not Available	737	Open in IMG/M
3300012917\|Ga0137395_10596091	All Organisms → cellular organisms → Bacteria	798	Open in IMG/M
3300012927\|Ga0137416_10840803	All Organisms → cellular organisms → Bacteria	814	Open in IMG/M
3300012944\|Ga0137410_11342739	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	620	Open in IMG/M
3300012944\|Ga0137410_11934597	Not Available	523	Open in IMG/M
3300012951\|Ga0164300_10969696	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	544	Open in IMG/M
3300012971\|Ga0126369_12420485	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	611	Open in IMG/M
3300012971\|Ga0126369_12919664	All Organisms → cellular organisms → Bacteria	560	Open in IMG/M
3300016341\|Ga0182035_10506749	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1031	Open in IMG/M
3300016357\|Ga0182032_10205058	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	1503	Open in IMG/M
3300016371\|Ga0182034_11254621	All Organisms → cellular organisms → Bacteria	646	Open in IMG/M
3300016387\|Ga0182040_10266311	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	1295	Open in IMG/M
3300016387\|Ga0182040_10572954	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Betaproteobacteria incertae sedis → Candidatus Accumulibacter → unclassified Candidatus Accumulibacter → Candidatus Accumulibacter sp. SK-11	911	Open in IMG/M
3300016387\|Ga0182040_10953694	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	713	Open in IMG/M
3300016404\|Ga0182037_10720131	All Organisms → cellular organisms → Bacteria	855	Open in IMG/M
3300017823\|Ga0187818_10294652	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Acidocella → unclassified Acidocella → Acidocella sp. 20-61-6	712	Open in IMG/M
3300017975\|Ga0187782_11593389	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhodovibrionaceae → Fodinicurvata → Fodinicurvata sediminis	516	Open in IMG/M
3300018085\|Ga0187772_10567058	All Organisms → cellular organisms → Bacteria	805	Open in IMG/M
3300018468\|Ga0066662_10525070	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1086	Open in IMG/M
3300018482\|Ga0066669_11218732	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	679	Open in IMG/M
3300020199\|Ga0179592_10015094	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	3390	Open in IMG/M
3300020583\|Ga0210401_10050197	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	3939	Open in IMG/M
3300020583\|Ga0210401_10686241	All Organisms → cellular organisms → Bacteria	885	Open in IMG/M
3300021170\|Ga0210400_10233624	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1500	Open in IMG/M
3300021170\|Ga0210400_10957931	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	697	Open in IMG/M
3300021171\|Ga0210405_11014960	All Organisms → cellular organisms → Bacteria → Proteobacteria	625	Open in IMG/M
3300021178\|Ga0210408_10066988	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2804	Open in IMG/M
3300021420\|Ga0210394_10446009	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1139	Open in IMG/M
3300021439\|Ga0213879_10121015	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	745	Open in IMG/M
3300021439\|Ga0213879_10229261	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Terriglobales bacterium	558	Open in IMG/M
3300021474\|Ga0210390_10137600	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae	2053	Open in IMG/M
3300021476\|Ga0187846_10043345	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	2006	Open in IMG/M
3300021478\|Ga0210402_10783257	Not Available	879	Open in IMG/M
3300021479\|Ga0210410_10817502	All Organisms → cellular organisms → Bacteria → Acidobacteria	817	Open in IMG/M
3300021560\|Ga0126371_11424166	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	823	Open in IMG/M
3300021560\|Ga0126371_12520850	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	622	Open in IMG/M
3300022557\|Ga0212123_10657684	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	652	Open in IMG/M
3300022709\|Ga0222756_1005454	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1313	Open in IMG/M
3300025961\|Ga0207712_10693053	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	888	Open in IMG/M
3300026498\|Ga0257156_1036596	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	999	Open in IMG/M
3300026527\|Ga0209059_1058117	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	1688	Open in IMG/M
3300026548\|Ga0209161_10499842	All Organisms → cellular organisms → Bacteria	538	Open in IMG/M
3300027173\|Ga0208097_1033858	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	591	Open in IMG/M
3300027698\|Ga0209446_1038964	Not Available	1197	Open in IMG/M
3300027783\|Ga0209448_10312872	Not Available	514	Open in IMG/M
3300027875\|Ga0209283_10255565	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1161	Open in IMG/M
3300027884\|Ga0209275_10083511	All Organisms → cellular organisms → Bacteria	1605	Open in IMG/M
3300027889\|Ga0209380_10361571	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	852	Open in IMG/M
3300028047\|Ga0209526_10039718	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	3310	Open in IMG/M
3300028047\|Ga0209526_10414482	All Organisms → cellular organisms → Bacteria	892	Open in IMG/M
3300029636\|Ga0222749_10017036	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2974	Open in IMG/M
3300029636\|Ga0222749_10404218	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	724	Open in IMG/M
3300030520\|Ga0311372_10765365	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	1330	Open in IMG/M
3300031057\|Ga0170834_107053262	All Organisms → cellular organisms → Bacteria	766	Open in IMG/M
3300031544\|Ga0318534_10440102	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	747	Open in IMG/M
3300031545\|Ga0318541_10037152	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	2450	Open in IMG/M
3300031549\|Ga0318571_10071824	Not Available	1079	Open in IMG/M
3300031679\|Ga0318561_10799619	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae	518	Open in IMG/M
3300031681\|Ga0318572_10219185	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	1114	Open in IMG/M
3300031681\|Ga0318572_10842291	All Organisms → cellular organisms → Bacteria	545	Open in IMG/M
3300031713\|Ga0318496_10355554	All Organisms → cellular organisms → Bacteria	809	Open in IMG/M
3300031713\|Ga0318496_10672551	Not Available	571	Open in IMG/M
3300031744\|Ga0306918_11132294	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	605	Open in IMG/M
3300031751\|Ga0318494_10408011	Not Available	788	Open in IMG/M
3300031768\|Ga0318509_10566209	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	633	Open in IMG/M
3300031768\|Ga0318509_10587892	Not Available	620	Open in IMG/M
3300031770\|Ga0318521_10071542	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	1849	Open in IMG/M
3300031771\|Ga0318546_10110458	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	1815	Open in IMG/M
3300031771\|Ga0318546_10273371	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1166	Open in IMG/M
3300031777\|Ga0318543_10066793	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	1499	Open in IMG/M
3300031782\|Ga0318552_10152620	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1160	Open in IMG/M
3300031793\|Ga0318548_10066484	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	1680	Open in IMG/M
3300031794\|Ga0318503_10268374	Not Available	554	Open in IMG/M
3300031794\|Ga0318503_10276753	Not Available	545	Open in IMG/M
3300031799\|Ga0318565_10112287	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1311	Open in IMG/M
3300031819\|Ga0318568_10281764	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1031	Open in IMG/M
3300031832\|Ga0318499_10373297	Not Available	547	Open in IMG/M
3300031879\|Ga0306919_10269613	Not Available	1285	Open in IMG/M
3300031890\|Ga0306925_10251131	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	1906	Open in IMG/M
3300031890\|Ga0306925_10577519	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1189	Open in IMG/M
3300031894\|Ga0318522_10156874	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	858	Open in IMG/M
3300031912\|Ga0306921_11277551	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhodovibrionaceae → Fodinicurvata → Fodinicurvata sediminis	813	Open in IMG/M
3300031912\|Ga0306921_12146862	All Organisms → cellular organisms → Bacteria	590	Open in IMG/M
3300031946\|Ga0310910_10204525	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	1533	Open in IMG/M
3300031954\|Ga0306926_10955825	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1022	Open in IMG/M
3300032001\|Ga0306922_10246740	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	1919	Open in IMG/M
3300032010\|Ga0318569_10192646	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	944	Open in IMG/M
3300032039\|Ga0318559_10189629	Not Available	943	Open in IMG/M
3300032041\|Ga0318549_10198974	Not Available	899	Open in IMG/M
3300032051\|Ga0318532_10182069	All Organisms → cellular organisms → Bacteria	746	Open in IMG/M
3300032052\|Ga0318506_10167020	All Organisms → cellular organisms → Bacteria	966	Open in IMG/M
3300032059\|Ga0318533_10102374	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	1983	Open in IMG/M
3300032064\|Ga0318510_10057462	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	1394	Open in IMG/M
3300032076\|Ga0306924_11642598	Not Available	676	Open in IMG/M
3300032076\|Ga0306924_12550846	Not Available	511	Open in IMG/M
3300032090\|Ga0318518_10644639	All Organisms → cellular organisms → Bacteria	539	Open in IMG/M
3300032091\|Ga0318577_10075329	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	1553	Open in IMG/M
3300032091\|Ga0318577_10502561	Not Available	578	Open in IMG/M
3300032261\|Ga0306920_100150129	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	3472	Open in IMG/M
3300032261\|Ga0306920_100223469	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2810	Open in IMG/M
3300032261\|Ga0306920_100236391	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	2726	Open in IMG/M
3300032261\|Ga0306920_102146429	Not Available	778	Open in IMG/M
3300032515\|Ga0348332_14480051	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	1245	Open in IMG/M
3300032892\|Ga0335081_10480981	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium	1569	Open in IMG/M
3300033290\|Ga0318519_10687382	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	625	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	96.88%
Host-Associated	Host-Associated	3.12%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	91.41%
Aquatic	Environmental → Aquatic	5.47%
Plants	Host-Associated → Plants	3.12%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	89.06%
Freshwater	Environmental → Aquatic → Freshwater	4.69%
Rhizoplane	Host-Associated → Plants → Rhizoplane	1.56%
Rhizosphere	Host-Associated → Plants → Rhizosphere	1.56%
Thermal Springs	Environmental → Aquatic → Thermal Springs	0.78%
Peat	Environmental → Terrestrial → Peat	0.78%
Plant Litter	Environmental → Terrestrial → Plant Litter	0.78%
Cave	Environmental → Terrestrial → Cave	0.78%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	79.69%
Loam	Environmental → Terrestrial → Soil → Loam	7.03%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	4.69%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	2.34%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	1.56%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	1.56%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	0.78%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	0.78%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified	0.78%
Unclassified	Environmental → Terrestrial → Cave → Unclassified	0.78%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	55.47%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	19.53%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	4.69%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	4.69%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	3.91%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	2.34%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	2.34%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	1.56%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	1.56%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	0.78%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	0.78%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	0.78%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified	0.78%
Unclassified	Environmental → Terrestrial → Cave → Unclassified → Unclassified	0.78%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	38.28%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	16.41%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	9.38%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	7.03%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	3.91%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	2.34%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	2.34%
Bulk Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Bulk Soil	1.56%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.56%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	1.56%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	1.56%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.56%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	0.78%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	0.78%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.78%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	0.78%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grass Soil	0.78%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.78%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.78%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.78%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.78%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	0.78%
Plant Litter	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter	0.78%
Biofilm	Environmental → Terrestrial → Cave → Unclassified → Unclassified → Biofilm	0.78%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	0.78%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.78%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.78%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.78%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2189573000	Grass soil microbial communities from Rothamsted Park, UK - July 2010 direct MP BIO 1O1 lysis 0-21cm (T0 for microcosms)	Environmental	Open in IMG/M
3300004080	Coassembly of ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300004091	Coassembly of ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300004635	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300005181	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127	Environmental	Open in IMG/M
3300005338	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2	Host-Associated	Open in IMG/M
3300005365	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005545	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300009093	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG	Host-Associated	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010166	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot27	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012917	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012951	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300017823	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_3	Environmental	Open in IMG/M
3300017975	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018085	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300020199	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021439	Vellozia epidendroides bulk soil microbial communities from rupestrian grasslands, the National Park of Serra do Cipo, Brazil - BS_R03	Environmental	Open in IMG/M
3300021474	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O	Environmental	Open in IMG/M
3300021476	Biofilm microbial communities from the roof of an iron ore cave, State of Minas Gerais, Brazil - TC_06 Biofilm (v2)	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300022557	Paint Pots_combined assembly	Environmental	Open in IMG/M
3300022709	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300025961	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026498	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NI-49-A	Environmental	Open in IMG/M
3300026527	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_151 (SPAdes)	Environmental	Open in IMG/M
3300026548	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155 (SPAdes)	Environmental	Open in IMG/M
3300027173	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF036 (SPAdes)	Environmental	Open in IMG/M
3300027698	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP04_OM2 (SPAdes)	Environmental	Open in IMG/M
3300027783	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP14_OM2 (SPAdes)	Environmental	Open in IMG/M
3300027875	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027884	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2 (SPAdes)	Environmental	Open in IMG/M
3300027889	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6 (SPAdes)	Environmental	Open in IMG/M
3300028047	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300029636	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030520	III_Palsa_N2 coassembly	Environmental	Open in IMG/M
3300031057	Oak Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031544	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f26	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031549	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f24	Environmental	Open in IMG/M
3300031679	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f23	Environmental	Open in IMG/M
3300031681	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f20	Environmental	Open in IMG/M
3300031713	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f22	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031751	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f24	Environmental	Open in IMG/M
3300031768	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f22	Environmental	Open in IMG/M
3300031770	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031777	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f24	Environmental	Open in IMG/M
3300031782	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f20	Environmental	Open in IMG/M
3300031793	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f21	Environmental	Open in IMG/M
3300031794	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f23	Environmental	Open in IMG/M
3300031799	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f21	Environmental	Open in IMG/M
3300031819	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f21	Environmental	Open in IMG/M
3300031832	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f25	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031894	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f18	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032010	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f22	Environmental	Open in IMG/M
3300032039	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f21	Environmental	Open in IMG/M
3300032041	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f22	Environmental	Open in IMG/M
3300032051	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f26	Environmental	Open in IMG/M
3300032052	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f19	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032064	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f17	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032090	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f22	Environmental	Open in IMG/M
3300032091	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f25	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300032515	FICUS49499 Metatranscriptome Czech Republic combined assembly (additional data)	Environmental	Open in IMG/M
3300032892	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5	Environmental	Open in IMG/M
3300033290	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f15	Environmental	Open in IMG/M

Geographical Distribution

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Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.54
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.54
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F065256

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
N55_08408880	2189573000	Grass Soil	EIGSVGQENDVPAGLLDGAWGDVAYMVAVSAQEGIMELVARSAPQQPGKF
Ga0062385_109161842	3300004080	Bog Forest Soil	GNVAQENDVPAGLLDGSWGDVAYTVAVSAQDGIMALITRGAPPTGGKT*
Ga0062387_1007832242	3300004091	Bog Forest Soil	PAGLLDGSWGDVAYTVAVSAQDGIMALIARGAPPTGGKT*
Ga0063356_1022134071	3300004463	Arabidopsis Thaliana Rhizosphere	ADGAEIGTVDMENDVPKGLLDGPWGDLAYTVALAAGEGLMQLVARGAPDGKT*
Ga0062388_1023636681	3300004635	Bog Forest Soil	PAGLLDGSWGDVAYTVAVSAQDGIMALITRGAPPTGGKT*
Ga0066678_102122611	3300005181	Soil	TVGQENDVPAGLLDGPWGDVAYMVAASAQDGIMQLVARGAPPPTGKS*
Ga0068868_1008428351	3300005338	Miscanthus Rhizosphere	RADGAEIGKVDMENDVPTGLLDGPWGDLAYTVALAAGEGLMQLVARGAPEGKT*
Ga0070688_1011356761	3300005365	Switchgrass Rhizosphere	GGEIGNVAMENDVPRGLLDGPWGDMAYTIAIAAGNGLAQLVARGSPLPGKTS*
Ga0070698_1009967982	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	IGTVGQENDVPTGLLDGAWGDVAYMVAVSAQDGIMELVARGAPQPTGKS*
Ga0070695_1007331342	3300005545	Corn, Switchgrass And Miscanthus Rhizosphere	DGAEIGKVDMENDVPKGLLDGPWGDLAYTVALAAGEGLMQLVARGAPEGKT*
Ga0066903_1033105261	3300005764	Tropical Forest Soil	VGQENDVPAGLLDGPWGDVAYMVGVSAQDGIMQLVSRGAPPASGKS*
Ga0105240_118646681	3300009093	Corn Rhizosphere	KIVWRVRRSDGAEIGKVDMENDVPKGLLEGPWGDLAYTVALAAGEGLMQLVARGAPEGKT
Ga0126373_111360372	3300010048	Tropical Forest Soil	DGPWSDVAYIVAASAQDGIMQLVARGAPQSAGKSG*
Ga0126373_117081111	3300010048	Tropical Forest Soil	DGPWGDVAYMVGVSAQDGIMQLVSRGAPPASGKS*
Ga0126306_101068105	3300010166	Serpentine Soil	GTVGQENEIPRGLLDGAWADTAYNIAVAAGDGLAQLVERGAPERSGLTAAR*
Ga0126378_106915101	3300010361	Tropical Forest Soil	GQENDVPAGLLDGPWGDVAYMVGVSAQDGIMQLVSRGAPPASGKS*
Ga0126379_111253191	3300010366	Tropical Forest Soil	VRRKDGDEIGTVGQENDVPTGLLDGPWSDVAYIVAAAAQDGIMQLVARGIPPSAGKS*
Ga0126381_1002674321	3300010376	Tropical Forest Soil	QENDVPAGLLDGAWGDVAYAVAIAAQDGIMQLISRGTLRSAGAS*
Ga0126381_1033903372	3300010376	Tropical Forest Soil	LDGPWGDVAYMVGVSAQEGIMQLVSRGAPPPSGKP*
Ga0126381_1034871901	3300010376	Tropical Forest Soil	VPTGLLNGAWGDVADAVAAAAQDGIMALVARGAPPHSRKS*
Ga0126383_102449501	3300010398	Tropical Forest Soil	GTVGQENDVPAGLLDGAWGDVAYMVAVSAQDGIMTLVARGAPQPAGGS*
Ga0137391_106589172	3300011270	Vadose Zone Soil	DVPTGLLDGAWGDVAYMVAVSAQDGIMELVARGAPQPTGKS*
Ga0137383_103992422	3300012199	Vadose Zone Soil	EIGTVGQENDVPGGLLDGPWGDLAYSVAIAAGDGLMQLVARGAAEPKS*
Ga0137378_110312692	3300012210	Vadose Zone Soil	GTVGQENDVPGGLLDGPWGDLAYSVAIAAGDGLMQLVARGASEPKS*
Ga0137395_105960911	3300012917	Vadose Zone Soil	PAGLLDGPWGDVAYMVAVSAQDGIMQLVARGTLPPTGKS*
Ga0137416_108408031	3300012927	Vadose Zone Soil	QENDVPAGLLDGPWGDVAYMVAVSAQDGIVQLVARGAVPATGKS*
Ga0137410_113427392	3300012944	Vadose Zone Soil	SDGTEIGTVGQENDVPKGMLEGPWGDLAYSIALAAGNGIVELVSRGAPAPQGAS*
Ga0137410_119345972	3300012944	Vadose Zone Soil	AGLLDGPWGDVAYMVAVSAQDGIVQLVARGAVPATGKS*
Ga0164300_109696961	3300012951	Soil	EIGTVGQENDIPAGLLDGPWGDVAYAVAVSAQDGIMTLVVRGAPRTAGGS*
Ga0126369_124204851	3300012971	Tropical Forest Soil	IGTVGQENDVPVGLLDGAWGEVAYMVAVSAQDGIMQLVVRGAPPPPTGKS*
Ga0126369_129196642	3300012971	Tropical Forest Soil	AGLLDGAWGDVAYMVAVSAQDGIMQLVSHGAAEPPGKS*
Ga0182035_105067492	3300016341	Soil	LDGPWGDVAYMVGVSAQDGIMQLVSRGAPPPSGKS
Ga0182032_102050581	3300016357	Soil	EIGTVGQENDVPTGLLDGAWGDVAYMVAVSAQDGILELVARGTPQSTGKS
Ga0182034_112546212	3300016371	Soil	GQENDVPTGLLDGPWSDIAYIVAAAAQDGIMQLVARGAPQSAGKS
Ga0182040_102663111	3300016387	Soil	GTVDQENEVPTGLLDGAWGDVAYMVAVSAQDGIMELVARGAPQPTGKS
Ga0182040_105729542	3300016387	Soil	GLLDGPWGDVAYMVAVSAQDGIMQLIARGAPAAPPPTGKS
Ga0182040_109536942	3300016387	Soil	VWHVKRADGVEIGTVGQENDVPKGMRDGPWGDLAYNVAVAAGDGIAQLVAQCAPERKGTS
Ga0182037_107201311	3300016404	Soil	NDVPAGLLDGAWGDVAYMVAVSAQEGIMELVARGAPQPAGNLEP
Ga0187818_102946522	3300017823	Freshwater Sediment	LLDGPWGDVAYMVAVSAQDGIMQLVARGAPPSTGKS
Ga0187782_115933891	3300017975	Tropical Peatland	RKDGGEIGTVGQENDVPTGLLDGPWSDVAYMVAASAQDGIMQLVARGAPQPSGKS
Ga0187772_105670581	3300018085	Tropical Peatland	QENDVPTGLLDGAWGDVAYTVAVAARDGIMALVARGAPPQSRKS
Ga0066662_105250701	3300018468	Grasslands Soil	LDGAWGDVAYMVAVSAQDGIMELVTRGVPQPAGKS
Ga0066669_112187322	3300018482	Grasslands Soil	GRAGGAEIGTVGQENDVPGGILDGAWGDLAYSVAIAAGDGLMQLVARGAPEPKS
Ga0179592_100150941	3300020199	Vadose Zone Soil	GEIGTVGQENDVPTGLLDGAWGDVAYMVAVSAQDGIMELVARGAPQPTGKS
Ga0210401_100501975	3300020583	Soil	IGTVGQENDVPAGLLDGAWGDVAYMVAVSAQDGIMELVARGAPQPAGKS
Ga0210401_106862412	3300020583	Soil	VPAGLLDGAWGDVAYMVAVSAQDGIMELVARGAPQPAGKS
Ga0210400_102336241	3300021170	Soil	AGLLDGAWGDVAYMVAVSAQDGIMELVARGAPQAAGKS
Ga0210400_109579311	3300021170	Soil	PAGLLDGAWGDVAYMVAVSAQDGIMELVARGAPQPAGKS
Ga0210405_110149601	3300021171	Soil	GRPGGAEIGTVGQENDVPGGILDGPWGDLAYSVAIAAGDGLMQLVARGAPEPKS
Ga0210408_100669883	3300021178	Soil	GQENDVPAGLLDGAWGDVAYMVAVSAQDGIMELVARGAPQAAGKS
Ga0210394_104460091	3300021420	Soil	PAGLLDGPWGDVAYMVAASAQDGIVQLVARGAVPPNGKS
Ga0213879_101210152	3300021439	Bulk Soil	NDVPAGLLDGAWGDVAYMVAVSAQDGIMELVSRGAPPPPGKS
Ga0213879_102292611	3300021439	Bulk Soil	ENDVPTGLLDGPWSDVAYMVAASAQDGIMQLVGGAGQSTGNL
Ga0210390_101376003	3300021474	Soil	IGTVGQENDVPAGLLDGPWGDVAYTVAVAAQDGIMQLISRGAPRSAGNS
Ga0187846_100433451	3300021476	Biofilm	NDVPAGLLDGAWGDVAYVVAVSAQDGIMQLVARGAPLSTGNF
Ga0210402_107832571	3300021478	Soil	GQENDVPTGLLDGAWGDVAYMVAVSAQDGIMELVARGAPSATGKS
Ga0210410_108175022	3300021479	Soil	QENDVPAGLLDGAWGDVAYMVAVSAQDGIMELVARGAPQAAGKS
Ga0126371_114241664	3300021560	Tropical Forest Soil	RKDGDEIGTVGQENDVPTGLLDGPWSDVAYIVAAAAQDGIMQLVARGIPPSAGKS
Ga0126371_125208501	3300021560	Tropical Forest Soil	GEIGTVGQENDVPAGLLDGPWGDVAYMVGVSAQDGIMQLVSRGAPPASGKS
Ga0212123_106576842	3300022557	Iron-Sulfur Acid Spring	ADIGTVGQENDVPKGLLDGPWGDVAYSVAIAASDGIGQLVARGAPERKGTS
Ga0222756_10054541	3300022709	Soil	LNGSWGDVAYTIAVAAQDGIMQLIARGAPQSTGNS
Ga0207712_106930531	3300025961	Switchgrass Rhizosphere	DGAEIGKVDMENDVPKGLLDGPWGDLAYTVALAAGEGLMQLVARGAPEGKT
Ga0257156_10365962	3300026498	Soil	LDGPWGDVAYMVAVSAQDGIVQLVARGAVPATGKS
Ga0209059_10581173	3300026527	Soil	IGTVGQENDVPAGLLDGAWGDVAYMVAVSAQDGIMTLVARGAPQPAGRS
Ga0209161_104998422	3300026548	Soil	NDVPAGLLDGPWGDVAYMVAVSAQDGIVQLVARGAVPPTGKS
Ga0208097_10338582	3300027173	Forest Soil	TVGQENDVPAGLLDGAWGDVAYMVAVSAQEGIMQLVVRGAPQPAGRS
Ga0209446_10389641	3300027698	Bog Forest Soil	PAGLLDGSWGDVAYTVAVSAQDGIMALITRGAPPTGGKT
Ga0209448_103128722	3300027783	Bog Forest Soil	GQENDVPAGLLDGPWGDVAYMVAVSAQDGIMQLIARGAPPSTGKS
Ga0209283_102555651	3300027875	Vadose Zone Soil	GAEIGTVGQENDVPGGILDGAWGDLAYSVAIAAGDGLMQLVVRGASDPKS
Ga0209275_100835113	3300027884	Soil	QENDVPAGLLDGAWGDVAYMVAVSAQDGIMELVARGAPQPAGKS
Ga0209380_103615711	3300027889	Soil	ENDVPAGLLDGAWGDVAYMVAVSAQDGIMELVARGAPQPAGKS
Ga0209526_100397184	3300028047	Forest Soil	GQENDVPAGLLDGAWGDVAYMVAVSAQDGIMELVARGAPQPAGKS
Ga0209526_104144823	3300028047	Forest Soil	NDVPAGLLDGAWGDVAYMVAVSAQDGIMELVARGAPQAAGKS
Ga0222749_100170361	3300029636	Soil	GQENDVPAGLLDGAWGDVAYMVAVSAQEGIMQLVVRGAPQPAGRS
Ga0222749_104042181	3300029636	Soil	AEIGTVGQENDVPKGLLDGPWGDVAYSVAIAAADGLAQLIARGAPEGKS
Ga0311372_107653653	3300030520	Palsa	GAGGEIGTVGQENDVPKGTLNDAWGDLAYNIAIAAGDGLMQLVEHAGAPAPKT
Ga0170834_1070532623	3300031057	Forest Soil	EIGTVGQENDVPPGLLDGAWGDVAYMVAVSAQDGIMQLVARGAPQPAGKS
Ga0318534_104401021	3300031544	Soil	GGEIGTVGQENDVPAGLLDGPWGDVAYMVAVSAQDGIMQLVARGTPPSTGKS
Ga0318541_100371521	3300031545	Soil	GLLDGAWGDVAYMVAVSAQDGIMQLVERGAAPRTGRS
Ga0318571_100718241	3300031549	Soil	ENDVPAGLLDGPWGDVAYMVAVSAQDGIMQLIARGAPPAPPPTGKS
Ga0318561_107996191	3300031679	Soil	EIGTVGQENDVPTGLLDGAWGDVAYMVAVSAQDGIMQLVARGAPQPAGKS
Ga0318572_102191852	3300031681	Soil	VEIGTVGQENDVPAGLLDGPWGDVAYMVGVSAQDGIMQLVSRGAPPPSGKS
Ga0318572_108422912	3300031681	Soil	ENDVPAGLLNGSWGDVAYTVAISAQDGIVELIARGAPPPAGKS
Ga0318496_103555542	3300031713	Soil	AGLLEGAWGDVAYMVAVSAQAGIMQLVERGAPPPSGKS
Ga0318496_106725512	3300031713	Soil	DVPAGLLDGPWGDVAYMVAVSAQDGIMQLIARGAPPAPPPTGKS
Ga0306918_111322941	3300031744	Soil	AGLLNGSWGDVAYTVAISAQDGIVELITRGAPPPAGKS
Ga0318494_104080112	3300031751	Soil	GPWGDVAYMVAVSAQDGIMQLIARGAPPAPPPTGKS
Ga0318509_105662092	3300031768	Soil	VGQENDVPAGLLDGAWGDVAYMVAVSAQDGIMQLVARGAPPAPQPPGKS
Ga0318509_105878921	3300031768	Soil	ENDVPTGLLDGAWGDVAYMVAVSAQDGIMQLVARGAPQPAGKS
Ga0318521_100715423	3300031770	Soil	DVPTGLLDGAWGDVAYMVAVSAQDGIMQLVARGAPQPAGKS
Ga0318546_101104581	3300031771	Soil	DVPASLLDGPWGDVAYMVAVSAQDGIMQLIARGAPPAPPPTGKS
Ga0318546_102733712	3300031771	Soil	GLLDGAWGDVAYMVAVSAQDGIMQLVARGAPPSTGKS
Ga0318543_100667931	3300031777	Soil	TVGQENDVPTGLLDGAWGDVAYMVAVSAQDGIMQLVARGAPQPAGKS
Ga0318552_101526201	3300031782	Soil	GLLDGAWGDVAYMVAVSAQDGIMQLVERGASPPTGRS
Ga0318548_100664841	3300031793	Soil	EIGTVGQENDVPAGLLDGPWGDVAYMVAVSAQDGIMQLVARGAPPSTGKS
Ga0318503_102683742	3300031794	Soil	QENDEPAGLLDGPWGDVAYMVAVSAQDGIMQLIARGAPPAPPPTGKS
Ga0318503_102767531	3300031794	Soil	DVPAGLLDGAWGDVAYMVAVSAQDGIMQLVARGAPPPTGKS
Ga0318565_101122872	3300031799	Soil	AGLLDGPWGDVAYMVAVSAQDGIMQLVSRGAPPPSGKS
Ga0318568_102817641	3300031819	Soil	VSTGLLDGAWGDVAYMVAVSAQDGIMELITRGTSQSTGKS
Ga0318499_103732971	3300031832	Soil	LDGPWGDVAYMVAVSAQDGIMQLIARGAPPAPPPTGKS
Ga0306919_102696131	3300031879	Soil	PAGLLNGSWGDVAYTVAISAQDGIVELIARGAPPPAGKS
Ga0306925_102511313	3300031890	Soil	LNGSWGDVAYTVAISAQDGIVELITRGAPPPAGKS
Ga0306925_105775191	3300031890	Soil	VPAGLLDGAWGDVAYMVAVSAQDGIMQLVERGAAPRTGRS
Ga0318522_101568741	3300031894	Soil	IGTVGQENDVPAGLLDGAWGDVAYMVAVSAQDGIMQLVARGAPPPTGKS
Ga0306921_112775512	3300031912	Soil	EIGTVGQENDVPTGLLDSAWGDVAYMVAVSARDGIMELVARGAPQPTGKS
Ga0306921_121468621	3300031912	Soil	QENDVPAGLLDGAWGDVAYMVAVSAQEGIMELVARGAPQPAGNLEP
Ga0310910_102045253	3300031946	Soil	QENDVPAGLLDGPWGDVAYMVAVSAQDGIMQLVARGAPPSTGKS
Ga0306926_109558251	3300031954	Soil	GLLDGAWGDVAYMVAVSAQDGIMELVARGAPQPTGKS
Ga0306922_102467403	3300032001	Soil	LLDGAWGDVAYMVAVSAQDGIMQLVERGAQAPTGKS
Ga0318569_101926462	3300032010	Soil	VPTGLLDGAWGDVAYMVAVSAQDGIMQLVARGAPQPAGKS
Ga0318559_101896291	3300032039	Soil	LDGPWGDVAYMVAVSAQDGIMQLVARGTPPSTGKS
Ga0318549_101989741	3300032041	Soil	DVPAGLLDGPWGDVAYMVAVSAEDGIMQLIARGAPPAPPPTGKS
Ga0318532_101820691	3300032051	Soil	VPAGLLDGPWGDVAYMVAVSAQDGIMQLIARGAPPAPPPTGKS
Ga0318506_101670202	3300032052	Soil	NDVPAGLLDGPWGDVAYMVAVSAQDGIMQLVSRGAPPPSGKS
Ga0318533_101023743	3300032059	Soil	AGLLDGPWGDVAYMVAVSAQDGIMQLIARGAPPAPPPTGKS
Ga0318510_100574621	3300032064	Soil	NDVPAGLLDGAWGDVAYMVAVSAQDGIMQLVERGAAPRTGRS
Ga0306924_116425982	3300032076	Soil	QENDVPTGLLNGAWGDVADAVAAAAQDGIMALVARGAPPHSRKS
Ga0306924_125508462	3300032076	Soil	GLLDSAWGDVAYMVAVSARDGIMELVARGAPQPTGKS
Ga0318518_106446391	3300032090	Soil	ENDVPAGLLDGAWGDVAYMVAVSAQDGIMQLVARGAPPSTGKS
Ga0318577_100753293	3300032091	Soil	QENDVPAGLLDGPWGDVAYMVAVSAQDGIMQLVARGTPPSTGKS
Ga0318577_105025612	3300032091	Soil	NEVPTGLLDGAWGDVAYMVAVSAQDGIMELVARGAPQPTGKS
Ga0306920_1001501291	3300032261	Soil	TVGQENDVPAGLLDGAWGDVAYMVAVSAQEGIMELVARGAPPPAGKS
Ga0306920_1002234691	3300032261	Soil	VGQGNDVPTGLLDGPWSDVAYIVAAAAQDGIMQLVARGAPQSAGKS
Ga0306920_1002363911	3300032261	Soil	NDVPAGLLDGAWGDVAYMVAVSAQDGIMQLVERGASPPTGKS
Ga0306920_1021464292	3300032261	Soil	VGQENDVPTGLLDGAWGDVAYMVAVSAQDGIMELVARGTPQSAGK
Ga0348332_144800511	3300032515	Plant Litter	GNVAQENDVPAGLLDGSWGDVAYTVAVSAQDGIMALIARGAPPSGGKT
Ga0335081_104809811	3300032892	Soil	QENDVPAGLLDGAWGDVAYSVALAAGDGIMALVERGAAQRQAKS
Ga0318519_106873821	3300033290	Soil	IGTVGQENDVPAGLLDGPWGDVAYMVGVSAQDGIMQLVSRGAPPPSGKS

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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