Metagenome / Metatranscriptome Family F065187

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F065187
Family Type	Metagenome / Metatranscriptome
Number of Sequences	128
Average Sequence Length	95 residues
Representative Sequence	MARIFVLALALMACGGAQAAAPEFDTEHFCADFAGSHASGGMGEMAKAVCLLSEQSTRTIVDKAWDRVSVTNRDMCLKTAGESYVYLAKCLGSVQGR
Number of Associated Samples	114
Number of Associated Scaffolds	128

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	31.25 %
% of genes near scaffold ends (potentially truncated)	41.41 %
% of genes from short scaffolds (< 2000 bps)	80.47 %
Associated GOLD sequencing projects	104
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (56.250 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere (9.375 % of family members)
Environment Ontology (ENVO)	Unclassified (32.031 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (50.000 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 72.16% β-sheet: 0.00% Coil/Unstructured: 27.84%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 128 Family Scaffolds
PF00005	ABC_tran	33.59
PF07859	Abhydrolase_3	20.31
PF03733	YccF	1.56
PF01914	MarC	1.56
PF01557	FAA_hydrolase	0.78
PF03729	DUF308	0.78

COG ID	Name	Functional Category	% Frequency in 128 Family Scaffolds
COG0657	Acetyl esterase/lipase	Lipid transport and metabolism [I]	20.31
COG2095	Small neutral amino acid transporter SnatA, MarC family	Amino acid transport and metabolism [E]	1.56
COG3304	Uncharacterized membrane protein YccF, DUF307 family	Function unknown [S]	1.56
COG3247	Acid resistance membrane protein HdeD, DUF308 family	General function prediction only [R]	0.78

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.25 %
All Organisms	root	All Organisms	43.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.25 %
cellular organisms	root	All Organisms → cellular organisms	43.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.25 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	41.41 %
Eukaryota	superkingdom	All Organisms → cellular organisms → Eukaryota	2.34 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.25 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	23.44 %
Opisthokonta	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta	2.34 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.78 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.25 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	17.19 %
Metazoa	kingdom	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa	2.34 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	1.56 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	0.78 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.25 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	16.41 %
Eumetazoa	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa	2.34 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1.56 %
Planctomycetia	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	0.78 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.25 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	4.69 %
Bilateria	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria	2.34 %
Myxococcales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	1.56 %
unclassified Planctomycetia	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → unclassified Planctomycetia	0.78 %
Xanthobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae	0.78 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.25 %
Protostomia	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia	2.34 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2.34 %
Cystobacterineae	suborder	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae	1.56 %
Planctomycetia bacterium 21-64-5	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → unclassified Planctomycetia → Planctomycetia bacterium 21-64-5	0.78 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.78 %
Pseudolabrys	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.25 %
Ecdysozoa	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa	2.34 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2.34 %
Myxococcaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Myxococcaceae	1.56 %
unclassified Pseudolabrys	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys	0.78 %
Planctomycetia bacterium 21-64-5	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → unclassified Planctomycetia → Planctomycetia bacterium 21-64-5	0.78 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.25 %
Nematoda	phylum	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Nematoda	2.34 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2.34 %
unclassified Myxococcaceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Myxococcaceae → unclassified Myxococcaceae	1.56 %
Pseudolabrys sp. Root1462	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys → Pseudolabrys sp. Root1462	0.78 %
Planctomycetia bacterium 21-64-5	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → unclassified Planctomycetia → Planctomycetia bacterium 21-64-5	0.78 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.25 %
Chromadorea	class	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Nematoda → Chromadorea	2.34 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2.34 %
Myxococcaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Myxococcaceae → unclassified Myxococcaceae → Myxococcaceae bacterium	1.56 %
Pseudolabrys sp. Root1462	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys → Pseudolabrys sp. Root1462	0.78 %
Planctomycetia bacterium 21-64-5	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → unclassified Planctomycetia → Planctomycetia bacterium 21-64-5	0.78 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.25 %
Rhabditida	order	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Nematoda → Chromadorea → Rhabditida	2.34 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2.34 %
Myxococcaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Myxococcaceae → unclassified Myxococcaceae → Myxococcaceae bacterium	1.56 %
Pseudolabrys sp. Root1462	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys → Pseudolabrys sp. Root1462	0.78 %
Planctomycetia bacterium 21-64-5	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → unclassified Planctomycetia → Planctomycetia bacterium 21-64-5	0.78 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.78 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2199352025\|deepsgr__Contig_4092	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3246	Open in IMG/M
3300000597\|AF_2010_repII_A1DRAFT_10049295	Not Available	1098	Open in IMG/M
3300004633\|Ga0066395_10084714	Not Available	1494	Open in IMG/M
3300005147\|Ga0066821_1001495	Not Available	1164	Open in IMG/M
3300005163\|Ga0066823_10000828	Not Available	3408	Open in IMG/M
3300005168\|Ga0066809_10156195	Not Available	595	Open in IMG/M
3300005328\|Ga0070676_10171839	Not Available	1403	Open in IMG/M
3300005329\|Ga0070683_100727478	All Organisms → cellular organisms → Bacteria → Proteobacteria	951	Open in IMG/M
3300005329\|Ga0070683_100775665	All Organisms → cellular organisms → Bacteria	919	Open in IMG/M
3300005331\|Ga0070670_100786750	Not Available	859	Open in IMG/M
3300005331\|Ga0070670_102156211	Not Available	513	Open in IMG/M
3300005332\|Ga0066388_100192715	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	2654	Open in IMG/M
3300005332\|Ga0066388_101069275	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1362	Open in IMG/M
3300005332\|Ga0066388_105304256	Not Available	654	Open in IMG/M
3300005335\|Ga0070666_10538565	Not Available	849	Open in IMG/M
3300005339\|Ga0070660_100350312	All Organisms → cellular organisms → Bacteria	1216	Open in IMG/M
3300005347\|Ga0070668_100189729	All Organisms → cellular organisms → Bacteria	1683	Open in IMG/M
3300005354\|Ga0070675_100187765	All Organisms → cellular organisms → Bacteria	1790	Open in IMG/M
3300005363\|Ga0008090_15748864	Not Available	1155	Open in IMG/M
3300005365\|Ga0070688_101749307	Not Available	509	Open in IMG/M
3300005367\|Ga0070667_101231771	Not Available	701	Open in IMG/M
3300005434\|Ga0070709_10930869	Not Available	688	Open in IMG/M
3300005440\|Ga0070705_101696073	Not Available	534	Open in IMG/M
3300005441\|Ga0070700_100184639	All Organisms → cellular organisms → Bacteria	1454	Open in IMG/M
3300005535\|Ga0070684_100517651	All Organisms → cellular organisms → Bacteria → Proteobacteria	1106	Open in IMG/M
3300005543\|Ga0070672_101819215	Not Available	548	Open in IMG/M
3300005545\|Ga0070695_101023588	Not Available	673	Open in IMG/M
3300005615\|Ga0070702_100680825	Not Available	781	Open in IMG/M
3300005719\|Ga0068861_100601077	All Organisms → cellular organisms → Bacteria	1010	Open in IMG/M
3300006041\|Ga0075023_100114127	All Organisms → cellular organisms → Bacteria	951	Open in IMG/M
3300006041\|Ga0075023_100415982	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Myxococcaceae → unclassified Myxococcaceae → Myxococcaceae bacterium	585	Open in IMG/M
3300006047\|Ga0075024_100103229	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1253	Open in IMG/M
3300006057\|Ga0075026_100419919	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	756	Open in IMG/M
3300006163\|Ga0070715_10028364	Not Available	2244	Open in IMG/M
3300006172\|Ga0075018_10043121	All Organisms → cellular organisms → Bacteria	1852	Open in IMG/M
3300006172\|Ga0075018_10281769	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Myxococcaceae → unclassified Myxococcaceae → Myxococcaceae bacterium	814	Open in IMG/M
3300006173\|Ga0070716_100005969	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	5928	Open in IMG/M
3300006358\|Ga0068871_101837387	Not Available	575	Open in IMG/M
3300006755\|Ga0079222_10614639	Not Available	834	Open in IMG/M
3300006755\|Ga0079222_11765669	Not Available	597	Open in IMG/M
3300006804\|Ga0079221_10744789	Not Available	691	Open in IMG/M
3300006806\|Ga0079220_10641660	All Organisms → cellular organisms → Bacteria	765	Open in IMG/M
3300006854\|Ga0075425_100149162	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2678	Open in IMG/M
3300006904\|Ga0075424_100790591	All Organisms → cellular organisms → Bacteria → Proteobacteria	1013	Open in IMG/M
3300009011\|Ga0105251_10107736	Not Available	1271	Open in IMG/M
3300009101\|Ga0105247_10579742	Not Available	829	Open in IMG/M
3300009148\|Ga0105243_11021685	Not Available	831	Open in IMG/M
3300009162\|Ga0075423_11294047	Not Available	779	Open in IMG/M
3300009176\|Ga0105242_10063784	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3035	Open in IMG/M
3300009553\|Ga0105249_10342247	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1513	Open in IMG/M
3300010358\|Ga0126370_10032187	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3169	Open in IMG/M
3300010359\|Ga0126376_12425507	Not Available	572	Open in IMG/M
3300010360\|Ga0126372_12699048	Not Available	548	Open in IMG/M
3300010361\|Ga0126378_10183267	All Organisms → cellular organisms → Bacteria	2161	Open in IMG/M
3300010366\|Ga0126379_10013439	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	5865	Open in IMG/M
3300010371\|Ga0134125_10440490	Not Available	1445	Open in IMG/M
3300010397\|Ga0134124_10534300	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Nematoda → Chromadorea → Rhabditida	1139	Open in IMG/M
3300010400\|Ga0134122_11008269	Not Available	816	Open in IMG/M
3300010401\|Ga0134121_11217792	Not Available	753	Open in IMG/M
3300010403\|Ga0134123_10930402	Not Available	878	Open in IMG/M
3300010403\|Ga0134123_11063190	All Organisms → cellular organisms → Bacteria	830	Open in IMG/M
3300012492\|Ga0157335_1026248	Not Available	586	Open in IMG/M
3300012494\|Ga0157341_1014937	Not Available	709	Open in IMG/M
3300012506\|Ga0157324_1018255	Not Available	687	Open in IMG/M
3300012515\|Ga0157338_1001209	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1793	Open in IMG/M
3300012519\|Ga0157352_1050313	Not Available	619	Open in IMG/M
3300012951\|Ga0164300_10016420	All Organisms → cellular organisms → Bacteria	2471	Open in IMG/M
3300012958\|Ga0164299_10398220	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	884	Open in IMG/M
3300012971\|Ga0126369_10734307	All Organisms → cellular organisms → Bacteria	1066	Open in IMG/M
3300012985\|Ga0164308_11384524	Not Available	642	Open in IMG/M
3300012986\|Ga0164304_11271733	Not Available	598	Open in IMG/M
3300012989\|Ga0164305_11697920	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → unclassified Planctomycetia → Planctomycetia bacterium 21-64-5	567	Open in IMG/M
3300013102\|Ga0157371_10429852	Not Available	969	Open in IMG/M
3300013297\|Ga0157378_10337957	Not Available	1467	Open in IMG/M
3300014325\|Ga0163163_11695411	Not Available	693	Open in IMG/M
3300014325\|Ga0163163_12674140	Not Available	556	Open in IMG/M
3300014745\|Ga0157377_10701568	Not Available	735	Open in IMG/M
3300015372\|Ga0132256_100877847	Not Available	1013	Open in IMG/M
3300015372\|Ga0132256_103167582	Not Available	553	Open in IMG/M
3300015373\|Ga0132257_100194097	Not Available	2402	Open in IMG/M
3300015374\|Ga0132255_101063458	All Organisms → cellular organisms → Bacteria	1215	Open in IMG/M
3300016404\|Ga0182037_10002761	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys → Pseudolabrys sp. Root1462	9383	Open in IMG/M
3300017792\|Ga0163161_10451043	Not Available	1040	Open in IMG/M
3300017947\|Ga0187785_10000405	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	16194	Open in IMG/M
3300017947\|Ga0187785_10157762	Not Available	958	Open in IMG/M
3300018060\|Ga0187765_10317696	Not Available	939	Open in IMG/M
3300019879\|Ga0193723_1057750	All Organisms → cellular organisms → Bacteria	1133	Open in IMG/M
3300021560\|Ga0126371_12384583	Not Available	640	Open in IMG/M
3300021560\|Ga0126371_13271070	Not Available	548	Open in IMG/M
3300025900\|Ga0207710_10196009	Not Available	996	Open in IMG/M
3300025901\|Ga0207688_10078760	Not Available	1879	Open in IMG/M
3300025903\|Ga0207680_11316022	Not Available	514	Open in IMG/M
3300025905\|Ga0207685_10011419	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Nematoda → Chromadorea → Rhabditida	2669	Open in IMG/M
3300025915\|Ga0207693_10019018	All Organisms → cellular organisms → Bacteria → Proteobacteria	5467	Open in IMG/M
3300025916\|Ga0207663_10848892	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	729	Open in IMG/M
3300025928\|Ga0207700_11900228	Not Available	522	Open in IMG/M
3300025932\|Ga0207690_11688789	Not Available	529	Open in IMG/M
3300025933\|Ga0207706_10481996	Not Available	1072	Open in IMG/M
3300025935\|Ga0207709_10247670	Not Available	1300	Open in IMG/M
3300025936\|Ga0207670_10345012	All Organisms → cellular organisms → Bacteria	1178	Open in IMG/M
3300025938\|Ga0207704_10137004	Not Available	1706	Open in IMG/M
3300025939\|Ga0207665_10003696	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	10222	Open in IMG/M
3300025944\|Ga0207661_10072062	All Organisms → cellular organisms → Bacteria	2826	Open in IMG/M
3300025960\|Ga0207651_10184605	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1658	Open in IMG/M
3300025961\|Ga0207712_10323455	Not Available	1273	Open in IMG/M
3300026023\|Ga0207677_10750798	Not Available	870	Open in IMG/M
3300026088\|Ga0207641_10049673	Not Available	3545	Open in IMG/M
3300026121\|Ga0207683_10001596	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	20375	Open in IMG/M
3300027874\|Ga0209465_10017552	All Organisms → cellular organisms → Bacteria → Proteobacteria	3267	Open in IMG/M
3300027894\|Ga0209068_10469117	All Organisms → cellular organisms → Bacteria	724	Open in IMG/M
3300027910\|Ga0209583_10070624	All Organisms → cellular organisms → Bacteria → Proteobacteria	1280	Open in IMG/M
3300027915\|Ga0209069_10007468	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	5419	Open in IMG/M
3300028796\|Ga0307287_10307440	Not Available	599	Open in IMG/M
3300031199\|Ga0307495_10002821	Not Available	1979	Open in IMG/M
3300031474\|Ga0170818_112825599	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1852	Open in IMG/M
3300031720\|Ga0307469_10547941	Not Available	1024	Open in IMG/M
3300031740\|Ga0307468_100143294	Not Available	1519	Open in IMG/M
3300031860\|Ga0318495_10034334	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Nematoda → Chromadorea → Rhabditida	2221	Open in IMG/M
3300031940\|Ga0310901_10116897	Not Available	984	Open in IMG/M
3300032089\|Ga0318525_10014227	Not Available	3667	Open in IMG/M
3300032174\|Ga0307470_10085040	All Organisms → cellular organisms → Bacteria	1760	Open in IMG/M
3300032174\|Ga0307470_10237567	Not Available	1194	Open in IMG/M
3300032205\|Ga0307472_100725740	Not Available	897	Open in IMG/M
3300033433\|Ga0326726_10026960	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	5002	Open in IMG/M
3300033433\|Ga0326726_10649225	All Organisms → cellular organisms → Bacteria	1016	Open in IMG/M
3300033502\|Ga0326731_1139269	All Organisms → cellular organisms → Bacteria	557	Open in IMG/M
3300034818\|Ga0373950_0023602	Not Available	1101	Open in IMG/M
3300034820\|Ga0373959_0009389	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1686	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	63.28%
Host-Associated	Host-Associated	36.72%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	56.25%
Plants	Host-Associated → Plants	36.72%
Aquatic	Environmental → Aquatic	7.03%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	53.91%
Rhizosphere	Host-Associated → Plants → Rhizosphere	24.22%
Rhizoplane	Host-Associated → Plants → Rhizoplane	10.16%
Sediment	Environmental → Aquatic → Sediment	7.03%
Peat	Environmental → Terrestrial → Peat	2.34%
Roots	Host-Associated → Plants → Roots	2.34%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	33.59%
Loam	Environmental → Terrestrial → Soil → Loam	17.97%
Soil	Host-Associated → Plants → Rhizosphere → Soil	13.28%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	10.94%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	7.81%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	7.03%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	2.34%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	2.34%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	2.34%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.56%
Soil	Host-Associated → Plants → Rhizoplane → Soil	0.78%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	21.09%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	14.06%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	13.28%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	10.94%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	7.81%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	7.81%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	7.03%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	3.91%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	3.12%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	2.34%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	2.34%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	2.34%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.56%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	0.78%
Tropical Rainforest	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest	0.78%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	0.78%

Habitat	Taxonomy	Distribution
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	9.38%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	7.03%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	6.25%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	6.25%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	5.47%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	4.69%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	3.91%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	3.91%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	3.91%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	3.12%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	3.12%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	3.12%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere	3.12%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	2.34%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	2.34%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	2.34%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	2.34%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	2.34%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	2.34%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.56%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	1.56%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	1.56%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.56%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.56%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	1.56%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	1.56%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.56%
Rhizosphere Soil	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere Soil	1.56%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	1.56%
Unplanted Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Unplanted Soil	0.78%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.78%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	0.78%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.78%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.78%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	0.78%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	0.78%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.78%
Tropical Rainforest Soil	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest → Tropical Rainforest Soil	0.78%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2199352025	Soil microbial communities from Rothamsted, UK, for project Deep Soil - DEEP SOIL	Environmental	Open in IMG/M
3300000597	Forest soil microbial communities from Amazon forest - 2010 replicate II A1	Environmental	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005147	Soil and rhizosphere microbial communities from Laval, Canada - mgLMC	Environmental	Open in IMG/M
3300005163	Soil and rhizosphere microbial communities from Laval, Canada - mgHMB	Environmental	Open in IMG/M
3300005168	Soil and rhizosphere microbial communities from Laval, Canada - mgLPC	Environmental	Open in IMG/M
3300005328	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG	Host-Associated	Open in IMG/M
3300005329	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG	Environmental	Open in IMG/M
3300005331	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG	Host-Associated	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005335	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG	Host-Associated	Open in IMG/M
3300005339	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG	Host-Associated	Open in IMG/M
3300005347	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG	Host-Associated	Open in IMG/M
3300005354	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG	Host-Associated	Open in IMG/M
3300005363	Tropical rainforest soil microbial communities from the Amazon Forest, Brazil, analyzing deforestation - Metatranscriptome F II A100 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005365	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG	Environmental	Open in IMG/M
3300005367	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG	Host-Associated	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005441	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG	Environmental	Open in IMG/M
3300005535	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG	Environmental	Open in IMG/M
3300005543	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG	Host-Associated	Open in IMG/M
3300005545	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG	Environmental	Open in IMG/M
3300005615	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG	Environmental	Open in IMG/M
3300005719	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2	Host-Associated	Open in IMG/M
3300006041	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2014	Environmental	Open in IMG/M
3300006047	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2013	Environmental	Open in IMG/M
3300006057	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2012	Environmental	Open in IMG/M
3300006163	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG	Environmental	Open in IMG/M
3300006172	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2014	Environmental	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006358	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2	Host-Associated	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006804	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200	Environmental	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300009011	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG	Host-Associated	Open in IMG/M
3300009101	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG	Host-Associated	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300012492	Arabidopsis rhizosphere microbial communities from North Carolina - M.Col.2.yng.030610	Host-Associated	Open in IMG/M
3300012494	Arabidopsis rhizosphere microbial communities from North Carolina - M.Cvi.2.yng.030610	Host-Associated	Open in IMG/M
3300012506	Arabidopsis rhizosphere microbial communities from North Carolina - M.Oy.6.old.040610	Host-Associated	Open in IMG/M
3300012515	Arabidopsis rhizosphere microbial communities from North Carolina - M.Col.7.yng.070610	Host-Associated	Open in IMG/M
3300012519	Unplanted soil (control) microbial communities from North Carolina - M.Soil.7.yng.070610	Environmental	Open in IMG/M
3300012951	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MG	Environmental	Open in IMG/M
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300012985	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MG	Environmental	Open in IMG/M
3300012986	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300013102	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG	Host-Associated	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300014325	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG	Host-Associated	Open in IMG/M
3300014745	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300017792	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG	Host-Associated	Open in IMG/M
3300017947	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0815_BV2_4_20_MG	Environmental	Open in IMG/M
3300018060	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_10_MG	Environmental	Open in IMG/M
3300019879	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2m2	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300025900	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025901	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes)	Host-Associated	Open in IMG/M
3300025903	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025905	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025932	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025933	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025935	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025936	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes)	Environmental	Open in IMG/M
3300025938	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025939	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025944	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300025960	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025961	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026023	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026088	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026121	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300027874	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes)	Environmental	Open in IMG/M
3300027894	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012 (SPAdes)	Environmental	Open in IMG/M
3300027910	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2014 (SPAdes)	Environmental	Open in IMG/M
3300027915	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2013 (SPAdes)	Environmental	Open in IMG/M
3300028796	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_141	Environmental	Open in IMG/M
3300031199	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 7_S	Environmental	Open in IMG/M
3300031474	Fir Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031860	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f25	Environmental	Open in IMG/M
3300031940	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D2	Environmental	Open in IMG/M
3300032089	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f23	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300033433	Lab enriched peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF15MN	Environmental	Open in IMG/M
3300033502	Lab enriched peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF9FY SIP fraction	Environmental	Open in IMG/M
3300034818	Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_3	Host-Associated	Open in IMG/M
3300034820	Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_2	Host-Associated	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
deepsgr_00350200	2199352025	Soil	MAAGMIRILVSVFVLMLCGGAQAAAPEFDTEHFCADFAEGHASGSMGDMAKAVCLLSERSTRTIVDKAWDRVSTDNKESCLKTSRESYVYLAKCLSSAPGR
AF_2010_repII_A1DRAFT_100492951	3300000597	Forest Soil	KRLLLYAAGMARIFVLALVLMMCGAAQAAAPEFDIEHFCADFAGSHANGRMGDMAKAVCLLSEQSTKTIVDKAWDRVSVTNRDMCVKTAGTSYVYLAKCLGSVQGR*
Ga0066395_100847142	3300004633	Tropical Forest Soil	MMCGAAQAAAPEFGIEHFCADFAGSHANGRMGDMAKAVCLLSEQSTKTIVDKAWDRVSVTNRDMCVKTAGASYVYLAKCLGSVQGR*
Ga0066821_10014952	3300005147	Soil	MARIVVLALALMACGGAQAAAPEFDTEHFCADFAGSHASGGMGEMAKAVCLLREQSTRTVVDKAWDRVSVTNRDMCLKTAGESYVYLAKCLGSVQGR*
Ga0066823_100008283	3300005163	Soil	MARIVVLALALMACGGAQAAAPEFDTEHFCADFAGSHASGGMGEMAKAVCLLSEQSTRTVVDKAWDRVSVTNRDMCLKTAGESYVYLAKCLGSVQGR*
Ga0066809_101561952	3300005168	Soil	MAASTARIFTLVLALTVCGGAHAAAPEFDTDHFCADFASGHEIGNIGDMAKAVCLLSEQSTKTVVEKAWDRVPATNKDTCLKTARESYVYLAKCLSSVQGR*
Ga0070676_101718392	3300005328	Miscanthus Rhizosphere	MARIFVLALALMACGGAQAAAPEFDTEHFCVDFAGSHASGGMAEMAKAVCLLSEQSTRTVVDKAWDRVSVTNRDMCLKSAGDSYVYLAKCLGSVQGR*
Ga0070683_1007274783	3300005329	Corn Rhizosphere	VLYAAAMARIIVLALALMACGGAQAAAPEFDTEHFCADFAGSHASGGMGEMARAVCLLSEQSTRTVVDKAWDRVSVTNRDMCLKSAGDSYVYLAKCLG
Ga0070683_1007756651	3300005329	Corn Rhizosphere	VLALALMACGGAQAAAPEFDTEHFCADFAGSHASGGMGDMAKAVCLLSEQSTRAIVDKAWDRISVTNKDMCLKTAGESYVYLAKCLGSVQGR*
Ga0070670_1007867501	3300005331	Switchgrass Rhizosphere	MARIFVLALALMACGGAQAAAPEFDTEHFCADFAGSHASGGMGDMAKAVCLLSEQSTRAIVDKAWDRISVTNKDMCLKTAGESYVYLAKCLGSVQGR*
Ga0070670_1021562111	3300005331	Switchgrass Rhizosphere	AAPEFDTEHFCADFAGSHASGGMGEMAKAVCLLSEQSTRTVVDKAWDRVSVTNRDMCLKTAGESYVYLAKCLGSVQGR*
Ga0066388_1001927151	3300005332	Tropical Forest Soil	MARIFVLALVLMMCGAAQAAAPEFGIEHFCADFAGSHANGRMGDMAKAVCLLSEQSTKTIVDKAWDRVSVTNRDMCVKTAGTSYVYLAKCLGSVQGR*
Ga0066388_1010692752	3300005332	Tropical Forest Soil	VVYAPAMARIFVLALALLACGGAQAAAPEFDTEHFCADFAGSHASGGLGDMAKAVCLLSEQSTRTIVDKAWDRVSVSNRDMCLKTAGESYVYLAKRLGSVQGR*
Ga0066388_1053042562	3300005332	Tropical Forest Soil	MARILVLALALMACGGAQAAAPEFDTEHFCADFAGSHASGGMGEMAKAVCLLSEQSTRTIVDKAWDRVSVTNRDTCLKTAGESYVYLAKCLGSLQGR*
Ga0070666_105385652	3300005335	Switchgrass Rhizosphere	VLYAAAMARIIVLALALMACGGAQAAAPEFDTEHFCADFAGSHASGGMGDMAKAVCLLSEQSTRAIVDKAWDRISVTNKDMCLKTAGESYVYLAKCLGSVQGR*
Ga0070660_1003503123	3300005339	Corn Rhizosphere	VLYAAAMARIIVLALALMACGGAQAAAPEFDTEHFCADFAGSHASGGMGEMAKAVCLLSEQSTRTVVDKAWDRVSVTNRDMCLKTAGESYVYLAKCLGS
Ga0070668_1001897292	3300005347	Switchgrass Rhizosphere	MARIFVLALALMSCGGAQAAAPEFDTEHFCADFAGSHASGGMGDMAKAVCLLSEQSTRAIVDKAWDRISVTNKDMCLKTAGESYVYLAKCLGSVQGR*
Ga0070675_1001877653	3300005354	Miscanthus Rhizosphere	VLYEPAMARIFVLALALMACGGAQAAAPEFDTEHFCVDFAGSHASGGMAEMAKAVCLLSEQSTRTVVDKAWDRVSVTNRDMCLKSAGESYVYLAKCLGSVQGR*
Ga0008090_157488642	3300005363	Tropical Rainforest Soil	MMCGAAQAAAPEFDIQHFCADFAGSHANGGMGDMAKAVCLLSEQSTKTIVDKAWDRVSVTNRDMCVKTAGASYVYLAKCLGSVQGR*
Ga0070688_1017493071	3300005365	Switchgrass Rhizosphere	CGGAQAAAPEFDTEHFCADFAGSHASGGMGEMARAVCLLSEQSTRTVVDKAWDRVSVTNRDMCLKSAGDSYVYLAKCLGSVQGR*
Ga0070667_1012317711	3300005367	Switchgrass Rhizosphere	VLYEPAMARIFVLALALMACGGAQAAAPEFDTEHFCVDFAGSHASGGMGEMAKAVCLLSEQSTRTIVDKAWDRVSVTNRDMCLKSAGDSYVYLAKCLGSVQGR*
Ga0070709_109308692	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	VLYEPAMARIFVLALALMACGGAQAAAPEFDTEHFCVDFAGSHASGGMAEMAKAVCLLSEQSTRTVVDKAWDRVSVTNRDMCLKSAGDSYVYLAKCLGSVQGR*
Ga0070705_1016960731	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	MARIVVLALALMACGGAQAAAPEFDTEHFCADFAGSHASGGMGEMAKAVCLLSEQSTRTVVDKAWDRVSVTNRDMCLKTAGESYV
Ga0070700_1001846393	3300005441	Corn, Switchgrass And Miscanthus Rhizosphere	VLYEPAMARIFVLALALMACGGAQAAAPEFDTEHFCADFAGSHASGGMGDMAKAVCLLSEQSTRAIVDKAWDRISVTNKDMCLKTAGESYVYLAKCLGSVQGR*
Ga0070684_1005176513	3300005535	Corn Rhizosphere	VLYAAAMARIIVLALALMACGGAQAAAPEFDTEHFCADFAGSHASGGMGEMARAVCLLSEQSTRTVVDKAWDRVSVTNRDMCLKSAGESYVYLAKCLGSVQGR*
Ga0070672_1018192151	3300005543	Miscanthus Rhizosphere	MARIFVLALALMACGGAQAAAPEFDTEHFCVDFAGSHASGGMAEMAKAVCLLSEQSTRTVVDKAWDRVSVTNRDMCLKSAGDSYVYLAKCL
Ga0070695_1010235882	3300005545	Corn, Switchgrass And Miscanthus Rhizosphere	VLALALMACGGAQAAAPEFNTEHFCADFAGSHASGGMGEMAKAVCLLSEQSTRTVVDKAWDRVSVTNRDMCLKTAGESYVYLAKCLGSVQGR*
Ga0070702_1006808251	3300005615	Corn, Switchgrass And Miscanthus Rhizosphere	MARIFVLALALMACGGAQAAAPEFDTEHFCADFAGSHASGGMGEMAKAVCLLSEQSTRTVVDKAWDRVSVTNRDMCLKTAGESYVYL
Ga0068861_1006010773	3300005719	Switchgrass Rhizosphere	VLYEPAMARIFVLALALMACGGAQAAAPEFDTEHFCVDFAGSHASGGMAEMAKAVCLLSEQSTRTVVDKAWDRVSVTNRDMCLKSAGE
Ga0075023_1001141271	3300006041	Watersheds	MRLLIVVIAIVLSGEAQAAAPAFDTEHFCAGFAESHASGSMGDMARAVCLLSEQSTKTIVDKAWSHVSADAQAACLKAAKESYVYLVQCLNSVQGQ*
Ga0075023_1004159821	3300006041	Watersheds	MARIFLVVFAIMLSGGAQAAAPAFDTEHFCAGFAEGHASGNMGDMARAVCLLSEQSTKTIVEKAWSHVSADAQAACLKTAKESYVYLAQCLNSVQGQ*
Ga0075024_1001032292	3300006047	Watersheds	MARIFLVVFAIMLSGGAQAAAPAFDTEHFCAGFAEGHASGNMGDMARAVCLLSEQSTKTIVDKAWSHVSADAQAACLKAAKESYVYLVQCLNSVQGQ*
Ga0075026_1004199192	3300006057	Watersheds	SGGAQAAAPAFDTEHFCAGFAEGHASGNMGDMARAVCLLSEQSTKTIVEKAWSHVSADAQAACLKAAKESYVYLAQCLNSVQGQ*
Ga0070715_100283642	3300006163	Corn, Switchgrass And Miscanthus Rhizosphere	VLALALMACGGAQAAAPEFDTEHFCADFAGSHASGGMGEMAKAVCLLSEQSTRTVVDKAWDRVSVTNRDMCLKTAGESYVYLAKCLGSVQGR*
Ga0075018_100431212	3300006172	Watersheds	MARIFLVVFAIMLSGGAQAAAPAFDTEHFCAGFAEGHASGNMGDMARAVCLLSEQSTKTIVEKAWSHVSADAQAACLKAAKESYVYLAQCLNSVQGQ*
Ga0075018_102817692	3300006172	Watersheds	MLRLLIVLLAIVLSGGAQAAAPEFDTEHFCMNFAGSHGSGSMGDMAKAVCLLSEQSTRTIVDKAWSHVSADGQAACLKVAGESYVYLAQCLASLPGQ*
Ga0070716_10000596911	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	MARIVVLALALMACGGAQAAAPEFDTEHFCADFAGSHASGGMGEMAKAVCLLSEQSTRTVVDKAWDRVSVTNRDMCLKTAGESYVYLA
Ga0068871_1018373871	3300006358	Miscanthus Rhizosphere	AMARIFVLALALMACGGAQAAAPEFDTEHFCADFAGSHASGGMGEMAKAVCLLSEQSTRTVVDKAWDRVSVTNRDMCLKTAGESYVYLAKCLGSVQGR*
Ga0079222_106146392	3300006755	Agricultural Soil	VLYEPAMARIFVLALALMACGRAQAAAPEFDTEHFCADFAGSHASGGMGEMAKAVCLLSEQSTRTVVDKAWDRVSVTNRDMCLKTAGESYVYLAKCLGSVQGR*
Ga0079222_117656691	3300006755	Agricultural Soil	MARIIVLARALMACGGAQAAAPEFNTEHFCADFAGSHASGGMGEMAKAVCLLSEQSTRTIVDKAWDRVSVTNRDMCLKSAGESYVYLAKCLGSVQGR*
Ga0079221_107447891	3300006804	Agricultural Soil	LMACGGAQAAAPEFDTEHFCVDFAGSHASGGMAEMAKAVCLLSEQSTRTIVDKAWDRVSVTNRDMCLKSAGESYVYLAKCLGSEQGR*
Ga0079220_106416602	3300006806	Agricultural Soil	RLVLYGPAMARIIVLARALMACGGAQAAAPEFNTEHFCADFAGSHASGGMGEMAKAVCLLSEQSTRTVVDKAWDRVSVTNRDMCLKTAGESYVYLAKCLGSVQGR*
Ga0075425_1001491622	3300006854	Populus Rhizosphere	MARIIVLALALMACGGAQAATPEFDTEHFCADFAGSHASGGMGEMARAVCLLSEQSTRTVVDKAWDRVSVTNRDMCLKSAGESYVYLAKCLGSVQGR*
Ga0075424_1007905912	3300006904	Populus Rhizosphere	MARIIVLALALMACGGAQAAAPEFDTEHFCADFAGSHASGGMGEMARAVCLLSEQSTRTVVDKAWDRVSVTNRDMCLKSAGESYVYLAKCLGSVQGR*
Ga0105251_101077362	3300009011	Switchgrass Rhizosphere	MARIFVLALALMACGGAQAAAPEFDTEHFCADFAGSHASGGMGEMAKAVCLLSEQSTRTVVDKAWDRVSVTNRDMCLKTAGESYVYLAKCLGSVQGR*
Ga0105247_105797421	3300009101	Switchgrass Rhizosphere	MACGGAQAAAPEFDTEHFCADFAGSHASGGMGDMAKAVCLLSEQSTRAIVDKAWDRISVTNKDMCLKTAGESYVYLAKCLGS
Ga0105243_110216852	3300009148	Miscanthus Rhizosphere	ACGGAQAAAPEFDTEHFCVDFAGSHASGGMAEMAKAVCLLSEQSTRTVVDKAWDRVSVTNRDMCLKSAGDSYVYLAKCLGSVQGR*
Ga0075423_112940471	3300009162	Populus Rhizosphere	MARIFVLALALMACGGAQAAAPVFDTEHFCADFAGSHASGGMGEMARAVCLLSEQSTRTVVDKAWDRVSVTNRDMCLKSAGESYVYLAKCLGSVQGR*
Ga0105242_100637842	3300009176	Miscanthus Rhizosphere	MARIFVLALALMACGGAQAAAPEFDTEHFCVDFAGSHASGGMAEMAKAVCLLSEQSTRTVVDKAWDRVSVTNRDMCLKTAGESYVYLAKCLGSVQGR*
Ga0105249_103422472	3300009553	Switchgrass Rhizosphere	MARIFVLALALMSCGGAQAAAPEFDTEHFCADFAGSHASGGVGDMAKAVCLLSEQSTRAIVDKAWDRISVTNKDMCLKTAGESYVYLAKCLGSVQGR*
Ga0126370_100321876	3300010358	Tropical Forest Soil	MARIFVLALVLMMCGAAQAAAPEFGIEHFCADFAGSHANGRMGDMAKAVCLLSEQSTKTIVDKAWDRVSVTNRDMCVKTAGASYVYLAKCLGSVQGR*
Ga0126376_124255071	3300010359	Tropical Forest Soil	EFDTEHFCADFAGSHASGGLGDMAKAVCLLSEQSTRTIVDKAWDRVSVSNRDMCLKTAGESYVYLAKRLGSVQGR*
Ga0126372_126990482	3300010360	Tropical Forest Soil	VLAFVLIMCGGARAAAPEFDTEHFCADFAGSHATGGMGDMAKAVCLLSEQSTKTIVDKAWDRVSVTSRDTCVKTAGESYVYLAKCLGSVQGR*
Ga0126378_101832673	3300010361	Tropical Forest Soil	MARIFVLALVLMMCGAAQAAAPEFDIEHFCANFAGSHANGGMGDMAKAVCLLSEQSTKTIVDKARERISVTNRDMCVKTAGASYVYLAKCLGSVQGR*
Ga0126379_100134394	3300010366	Tropical Forest Soil	MARIFVLALVLMMCGAAQAAAPEFDIEHFCADFAGSHANGRMGDMAKAVCLLSEQSTKTIVDKAWDRVSVTNRDMCVKTAGTSYVYLAKCLGSVQGR*
Ga0134125_104404902	3300010371	Terrestrial Soil	MARIFVLALALMACGGAQAAAPEFDTEHFCADFAGSHASGGMGEMAKAVCLLSEQSTRTVVDKAWDRVSVTNRDMCLKSAGESYVYLAKCLGSVQGR*
Ga0134124_105343001	3300010397	Terrestrial Soil	IIVLALALMACGGAQAAAPEFNTEHFCADFAGSHASGGMGEMARAVCLLSEQSTRTVVDKAWDRVSVTNRDMCLKSAGESYVYLAKCLGSVQGR*
Ga0134122_110082692	3300010400	Terrestrial Soil	MARIFILALALMACGGAQAAAPEFDTEHFCVDFAGSHASGGMAEMAKAVCLLSEQSTRTVVDKAWDRVSVTNRDMCLKSAGESYVYLAKCLGSVQGR*
Ga0134121_112177922	3300010401	Terrestrial Soil	ANFGTGLKLPVLYEPAMARSVVLALALMACGGAQAAAPEFDTEHFCADFAGSHASGGMGEMAKAVCLLSEQSTRTVVDKAWDRVSVTNRDMCLKTAGESYVYLAKCLGSVQGR*
Ga0134123_109304022	3300010403	Terrestrial Soil	MARIVVLALALMACGGAQAAAPEFDTEHFCADFAGSHASGGMGEMAKAVCLLSEQSTRTVVDKAWDRVSVTNRDMCLKSAGDSYVYLAKCLGSVQGR*
Ga0134123_110631902	3300010403	Terrestrial Soil	MARIFVLALALMSCGGAQAAAPEFDTEHFCADFAGSHASGGMGDMAKAVCLLSEQSTRAIVDKAWDRISVTNKDMCLKTA
Ga0157335_10262482	3300012492	Arabidopsis Rhizosphere	MARIIVLALALMACGGAQAAAPEFDTEHFCADFAGSHASGGMGEMAKAVCLLSEQSTRTIVDKAWDRVSVTNRDMCLKSAGESYVYLAKCLGSVQGR*
Ga0157341_10149372	3300012494	Arabidopsis Rhizosphere	MARIFVLALALMACGGAQAAAPEFDTEHFCADFAGSHASGGMGDMAKAVCLLSEQSIRAIVDKAWDRISVTNKDMCLKTAGESYVYLAKCLGSVQGR*
Ga0157324_10182551	3300012506	Arabidopsis Rhizosphere	MARIFVLALALMACGGAQAAAPEFDTEHFCADFAGSHASGGMGDMAKAVCLLSEQSTRAIVDKAWDRISVTNKDLCLKTAGESYVYLAKCLGSVQGR*
Ga0157338_10012092	3300012515	Arabidopsis Rhizosphere	MARIFVLALALMACGGAQAAAPEFDTEHFCADFAGSHASGGMGEMAKAVCLLSEQSTRAIVDKAWDRISVTNKDLCLKTAGESYVYLAKCLGSVQGR*
Ga0157352_10503131	3300012519	Unplanted Soil	LMSCGGAQAAAPEFDTEHFCADFAGSHASGGMGDMAKAVCLLSEQSTRAIVDKAWDRISVTNKDMCLKTAGESYVYLAKCLGSVQGR*
Ga0164300_100164204	3300012951	Soil	MARIFGLALALMACGGAQAAAPEFDTEHFCADFAGSHASGGMGEMAKAVCLLSEQSTRTVVDKAWDRVSVTNRDMCLKTAGESYVYLAKCLGSVQGR*
Ga0164299_103982203	3300012958	Soil	PAFDSEHFCAGFVENNASGNMGEMAKAVCLLSEESTKSVVDKAWSHASADGQAACLKAAGESYVILAHCLSSLPGQ*
Ga0126369_107343072	3300012971	Tropical Forest Soil	MARILVLALVLMMCGAAQAAAPEFDIEHFCANFAGSHANGGMGDMAKAVCLLSEQSTKTIVDKARERISVTNRDMCVKTAGASYVYLAKRLGSVQGR*
Ga0164308_113845241	3300012985	Soil	MARIIVLALALMACGGAQAAAPEFDTEHFCADFAGSHASGGMGDMAKAVCLLSEQSTRAIVDKAWDRISVTNKDMCLKTAGESYVYLAKCLGSVQGR*
Ga0164304_112717331	3300012986	Soil	MARIFVLALALMACGGAQAAAPEFDTEHFCVDFAGSHASGGMAEMAKAVCLLSEQSTRTVVDKAWDRVSVTNRDMCLKSAGDSY
Ga0164305_116979201	3300012989	Soil	KLPALYEPAMARIVVLALALMACGGAQAAAPEFDTEHFCADFAGSHASGGMGDMAKAVCLLSEQSTRAIVDKAWDRISVTNKDMCLKTAGESYVYLAKCLGSVQGR*
Ga0157371_104298522	3300013102	Corn Rhizosphere	LSHFGTGPKLPALYEPAMARIVVLALALMACGGAQAAAPEFDTEHFCADFAGSHASGGMGEMAKAVCLLSEQSTRTVVDKAWDRVSVTNRDMCLKTAGESYVYLAKCLGSVQGR*
Ga0157378_103379571	3300013297	Miscanthus Rhizosphere	AMARIFVLALALMACGGAQAAAPEFDTEHFCVDFAGSHASGGMAEMAKAVCLLSEQSTRTVVDKAWDRVSVTNRDMCLKSAGDSYVYLAKCLGSVQGR*
Ga0163163_116954111	3300014325	Switchgrass Rhizosphere	AAAPEFDTEHFCADFAGSHASGGMGEMARAVCLLSEQSTRTVVDKAWDRVSVTNRDMCLKSAGESYVYLAKCLGSVQGR*
Ga0163163_126741401	3300014325	Switchgrass Rhizosphere	GPAMARIFVLALALMACGGAQAAAPEFDTEHFCADFAGSHASGGMGDMAKAVCLLSEQSTRAIVDKAWDRISVTNKDMCLKTAGESYVYLAKCLGSVQGR*
Ga0157377_107015682	3300014745	Miscanthus Rhizosphere	MARIVVLALALMACGGAQAAAPEFDTEHFCADFAGSHASGGMGEMARAVCLLSEQSTRTVVDKAWDRVSVTNRDMCLKSAGDSYVYLAKCLGSVQGR*
Ga0132256_1008778472	3300015372	Arabidopsis Rhizosphere	VRRRTGSPPEFDTEHFCADFAGSHASGGMGEMAKAVCLLSEQSTRTIVDKAWDRVSVTNRDMCLKTAGESYVYLAKCLGSVQGR*
Ga0132256_1031675821	3300015372	Arabidopsis Rhizosphere	MARIIVLALALMACGGAQAAAPEFDTEHFCADFAGSHASGGMGEMARAVCLLSEQSTRTVVDKAWDRVSVTNRDMCLKSAGESYVYLANCL
Ga0132257_1001940972	3300015373	Arabidopsis Rhizosphere	MARIFVLALALMACGSAQAAAPEFDTEHFCADFAGSHASGGMGEMAKAVCLLSEQSTRTIVDKAWDRISVSNRDMCLKSAGESYVYLAKCLGSVQGR*
Ga0132255_1010634582	3300015374	Arabidopsis Rhizosphere	MARIFVLALALMACGGAQAAAPEFDTEHFCADFAGSHASGGMGEMAKAVCLLSEQSTRTIVDKAWDRVSVTNRDMCLKTAGESYVYLAKCLGSVQGR*
Ga0182037_100027611	3300016404	Soil	MARIFVLALVLMMCGAAQAAAPEFDIQHFCADFAGSHANGGMGDMAKAVCLLSEQSTKTIVDKAWDRVSVTNRDMCVKTAGASYVYLAKCLGSVQGR
Ga0163161_104510432	3300017792	Switchgrass Rhizosphere	MARIFVLALALMACGGAQAAAPEFDTEHFCVDFAGSHASGGMAEMAKAVCLLSEQSTRTVVDKAWDRVSVTNRDMCLKSAGESYVYLAKCLGSVQGR
Ga0187785_100004054	3300017947	Tropical Peatland	MARIVVVVFAIMLCGGAQAASPEFDMDHFCTNFAGSHGGAGMGDLAKAVCLMSERSTKIAVDRAWDRVPASSKENCLKVAGESYVYLAKCLGSVGVAGVP
Ga0187785_101577622	3300017947	Tropical Peatland	MARIFVLALALLACGSAQAAAPEFDTEHFCADFAGSHASGGMGEMAKAVCLLSEQSTRTVVDKAWDRVSVTNRDMCLKTAGESYVYLAKCLGSVQGR
Ga0187765_103176962	3300018060	Tropical Peatland	ARILVLALALMACGGAQAAGPEFDTEHFCADFAGSHASGGMGEMAKAVCLLSEQSTRTVVDKAWDRVSVTNRDMCLKTAGESYVYLAKCLGSVQGR
Ga0193723_10577502	3300019879	Soil	MAAGMIRILVSVFVLTLCGGAQAAAPEFDTEHFCADFAEGHASGSMGDMAKAVCLLSERSTRTIVDKAWDRVSTDNKESCLKTSRESYVYLAKCLSSAPGR
Ga0126371_123845831	3300021560	Tropical Forest Soil	MMCGAAQAAAPEFDIEHFCANFAGSHANGGMGDMAKAVCLLSEQSTKTIVDKARERISVTNRDMCVKTAGASYVYLAKCLGSVQGR
Ga0126371_132710701	3300021560	Tropical Forest Soil	MARIFVLALVLMMCGAAQAAAPEFDIQHFCADFAGSHANGGMGDMAKAVCLLSEQSTKTIVDKAWDRVSVTNRDMCVKSAGASYVYLAKCLGSVQGR
Ga0207710_101960091	3300025900	Switchgrass Rhizosphere	MACGGAQAAAPEFDTEHFCADFAGSHASGGMGEMARAVCLLSEQSTRTVVDKAWDRVSVTNRDMCLKSAGESYVYLAKCLGSVQGR
Ga0207688_100787603	3300025901	Corn, Switchgrass And Miscanthus Rhizosphere	MARIIVLALALMACGGAQAAAPEFDTEHFCADFAGSHASGGMGDMAKAVCLLSEQSTRAIVDKAWDRISVTNKDMCLKTAGESYVYLAKCLGSVQGR
Ga0207680_113160222	3300025903	Switchgrass Rhizosphere	IFVLALALMACGGAQAAAPEFDTEHFCADFAGSHASGGMGDMAKAVCLLSEQSTRAIVDKAWDRISVTNKDMCLKTAGESYVYLAKCLGSVQGR
Ga0207685_100114191	3300025905	Corn, Switchgrass And Miscanthus Rhizosphere	ALYEPAMARIVVLALALMACGGAQAAAPEFDTEHFCADFAGSHASGGMGEMAKAVCLLSEQSTRTVVDKAWDRVSVTNRDMCLKTAGESYVYLAKCLGSVQGR
Ga0207693_100190181	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	MARIVVLALALMACGGAQAAAPEFDTEHFCADFAGSHASGGMGEMARAVCLLSEQSTRTVVDKAWDRVSVTNRDMCLKSAGDSY
Ga0207663_108488922	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	MARIFVLALALMSCGGAQAAAPEFDTEHFCADFAGSHASGGMGDMAKAVCLLSEQSTRAIVDKAWDRISVTNKDMCLKTAGESYVYLAKCLGSVQGR
Ga0207700_119002282	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	ARIFVLALALMACGGAQAAAPEFDTEHFCVDFAGSHASGGMAEMAKAVCLLSEQSTRTVVDKAWDRVSVTNRDMCLKSAGDSYVYLAKCLGSVQGR
Ga0207690_116887891	3300025932	Corn Rhizosphere	MARIVVLALALMACGGAQAAAPEFDTEHFCADFAGSHASGGMGEMAKAVCLLSEQSTRTVVDKAWDRVSVTNRDMCLKTAGESYVYLAKCLGSVQ
Ga0207706_104819962	3300025933	Corn Rhizosphere	MARIFVLALALMACGGAQAAAPEFDTEHFCADFAGSHASGGMGDMAKAVCLLSEQSTRAIVDKAWDRISVTNKDMCLKTAGESYVYLAKCLGSVQGR
Ga0207709_102476702	3300025935	Miscanthus Rhizosphere	VLYEPAMARIVVLALALMACGGAQAAAPEFDTEHFCADFAGSHASGGMGEMAKAVCLLSEQSTRTVVDKAWDRVSVTNRDMCLKSAGDSYVYLAKCLGSVQGR
Ga0207670_103450123	3300025936	Switchgrass Rhizosphere	MARIVVLALALMACGGAQAAAPEFDTEHFCADFAGSHASGGMGEMAKAVCLLSEQSTRTVVDKAWDRVSVTNRDMCLKTAGES
Ga0207704_101370042	3300025938	Miscanthus Rhizosphere	AMARIIVLALALMACGGAQAAAPEFATEHFCADFAGSHASGGMGEMARAVCLLSEQSTRTVVDKAWDRVSVTNRDMCLKSAGDSYVYLAKCLGSVQGR
Ga0207665_1000369612	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	MARIVVLALALMACGGAQAAAPEFDTEHFCADFAGSHASGGMGEMAKAVCLLSEQSTRTVVDKAWDRVSVTNRDMCLKSAGDSYVYLAKCLGSVQGR
Ga0207661_100720621	3300025944	Corn Rhizosphere	MARIIVLALALMACGGAQAAAPEFDTEHFCADFAGSHASGGMGEMARAVCLLSEQSTRTVVDKAWDRVSVTNRDMCLK
Ga0207651_101846052	3300025960	Switchgrass Rhizosphere	VLYEPAMARIFVLALALMACGGAQAAAPEFDTEHFCADFAGSHASGGMGEMAKAVCLLSEQSTRTVVDKAWDRVSVTNRDMCLKTAGESYVYLAKCLGSVQGR
Ga0207712_103234551	3300025961	Switchgrass Rhizosphere	MARIFVLALALMSCGGAQAAAPEFDTEHFCADFAGSHASGGVGDMAKAVCLLSEQSTRAIVDKAWDRISVTNKDMCLKTAGESYVYLAKCLGSVQGR
Ga0207677_107507982	3300026023	Miscanthus Rhizosphere	VLYAAAMARIIVLALALMACGGAQAAAPEFDTEHFCADFAGSHASGGMGEMARAVCLLSEQSTRTVVDKAWDRVSVTNRDMCLKSAGESYVYLAKCLGSVQGR
Ga0207641_100496732	3300026088	Switchgrass Rhizosphere	WRAAAQAAAPEFDTEHFCADFAGSHASGGMGEMARAVCLLSEQSTRTVVDKAWDRVSVTNRDMCLKSAGESYVYLAKCLGSVQGR
Ga0207683_1000159612	3300026121	Miscanthus Rhizosphere	VLYEPAMARIFVLALALMACGGAQAAAPEFDTEHFCADFAGSHASGGMGDMAKAVCLLSEQSTRAIVDKAWDRISVTNKDMCLKTAGESYVYLAKCLGSVQGR
Ga0209465_100175522	3300027874	Tropical Forest Soil	AQAAATEFDIQHFCADFAGSHANGGMGDMAKAVCLLSEQSTKTIVDKAWDRVSVTNRDMCVKTAGASYVYLAKCLGSVQGR
Ga0209068_104691172	3300027894	Watersheds	MARIFLVVFAIMLSGGAQAAAPAFDTEHFCAGFAEGHASGNMGDMARAVCLLSEQSTKTIVEKAWSHVSADAQAACLKAAKESYVYLAQCLNSVQGQ
Ga0209583_100706242	3300027910	Watersheds	MRLLIVVIAIVLSGEAQAAAPAFDTEHFCAGFAESHASGSMGDMARAVCLLSEQSTKTIVDKAWSHVSADAQAACLKAAKESYVYLVQCLNSVQGQ
Ga0209069_100074686	3300027915	Watersheds	MARIFLVVFAIMLSGGAQAAAPAFDTEHFCAGFAEGHASGNMGDMARAVCLLSEQSTKTIVDKAWSHVSADAQAACLKAAKESYVYLVQCLNSVQGQ
Ga0307287_103074401	3300028796	Soil	FVLTLCGGAQAAAPEFDTEHFCADFAEGHASGSMGDMAKAVCLLSERSTRTIVDKAWDRVSTDNKESCLKTSRESYVYLAKCLSSAPGR
Ga0307495_100028212	3300031199	Soil	LVSVFVLMLCGGAQAAAPEFDTEHFCADFAEGHASGSMGDMAKAVCLLSERSTRTIVDKAWDRVSTDNKESCLKTSRESYVYLAKCLSSAPGR
Ga0170818_1128255992	3300031474	Forest Soil	MAAGMMRILVSVFVLMLCGGAQAAAPEFDTEHFCADFAEGHASGSMGDMAKAVCLLSERSTRTIVDKAWDRVSTDNKESCLKTSRESYVYLAKCLSSAPGR
Ga0307469_105479412	3300031720	Hardwood Forest Soil	ARIFVLALALMACGGAQAAAPEFDTEHFCADFAGSHASGGMGEMAKAVCLLSEQSTRTVVDKAWDRVSVTNRDMCLKSAGESYVYLAKCLGSAQGR
Ga0307468_1001432942	3300031740	Hardwood Forest Soil	MARIFVLALALMACGGAQAAAPEFDTEHFCADFAGSHASGGMGEMAKAVCLLSEQSTRTVVDKAWDRVSVTNRDMCLKSAGESYVYLAKCLGSVQGR
Ga0318495_100343342	3300031860	Soil	APPRPRPLNSTHEHFCADFAGSHANGGMGDMAKAVCLLSEQSTKTIVDKAWDRVSVTNRDMCVKTAGASYVYLAKCLGSVQGR
Ga0310901_101168971	3300031940	Soil	ALALMACGGAQAAAPEFDTEHFCADFAGSHASGGMGDMAKAVCLLSEQSTRAIVDKAWDRISVTNKDMCLKTAGESYVYLAKCLGSVQGR
Ga0318525_100142273	3300032089	Soil	LYAAGMARIFVLALVLMTCGAAHAAAPEFDIEHFCADFAGSHANGGMGDMAKAVCLLSEQSTKTIVDKAWDRVSVTNRDMCVKTAGASYVYLAKCLGSVQGR
Ga0307470_100850402	3300032174	Hardwood Forest Soil	VLYEPAMARIFVLALALMACGGAQAAAPEFDTEHFCADFAGSHASGGMGEMAKAVCLLSEQSTRTVVDKAWDRVSVTNRDMCLKTAGESYVYLAKCLGSVQG
Ga0307470_102375671	3300032174	Hardwood Forest Soil	MARNFVLALALMSCGGAQAAAPEFDTEHFCADFAGSHASGGMGDMAKAVCLLSEQSTRAIVDKAWDRISVTNKDMCLKTAGESYVYLAKCLGSVQGR
Ga0307472_1007257402	3300032205	Hardwood Forest Soil	MARIFVLALALMACGGAQAAAPEFDTEHFCADFAGSHASGGMGEMAKAVCLLSEQSTRTVVDKAWDRVSVTNRDMCLKSAGESYVYLAKCLGSAQGR
Ga0326726_100269605	3300033433	Peat Soil	MMRVSIVVIAMMLSGGAQAAVPAFDTEHFCAGFAETHASGNMGDMARAVCLLSEQSTKTIVDKAWSHVSADAQASCLKAAGESYVNLAHCLSSLPGQ
Ga0326726_106492251	3300033433	Peat Soil	MIRLSIVVIAMMLSGGVQAAAPAFDTEHFCAGFAESHASGNMGDMARAVCLLSEQSTKTIVDKAWSHASADGQAACLKAAGESYVSLAHCLSSLPGQ
Ga0326731_11392692	3300033502	Peat Soil	MIRLSIVVIAMMLSGGAQAAAPAFDTEHFCAGFAETHASGNMGDMARAVCLLSEQSTKTIVDKAWSHASADGQAACLKAAGESYVSLAHCLSSLPGQ
Ga0373950_0023602_871_1101	3300034818	Rhizosphere Soil	AAAPEFNTEHFCADFAGSHASGGMGEMAKAVCEQSTRTIVDKAWDRISVSNRDMCLKSAGESYVYLAKCLGSVQGR
Ga0373959_0009389_300_593	3300034820	Rhizosphere Soil	MARIFVLALALMSCGGAQAAAPEFDTEHFCADFAGSHASGGMGDMAKAVCLLSEQSTRAIVDKAWDRISVTNKDMCLKTAGESYVYLAKCLGSVQGW

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F065187

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences