Metagenome / Metatranscriptome Family F065161

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F065161
Family Type	Metagenome / Metatranscriptome
Number of Sequences	128
Average Sequence Length	82 residues
Representative Sequence	MPIRSLLSQTSFNTDQTEMIAKAFDDAWAQLQGDEADPAMASLVRTALAKRIIETAQRPGIDAQKLRDDAIAYVKNNPLWPTP
Number of Associated Samples	108
Number of Associated Scaffolds	128

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	51.56 %
% of genes near scaffold ends (potentially truncated)	46.09 %
% of genes from short scaffolds (< 2000 bps)	91.41 %
Associated GOLD sequencing projects	100
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.67

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Unclassified (71.094 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (43.750 % of family members)
Environment Ontology (ENVO)	Unclassified (41.406 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (46.094 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 50.45% β-sheet: 0.00% Coil/Unstructured: 49.55%
Feature Viewer

Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.67
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.67
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 128 Family Scaffolds
PF04392	ABC_sub_bind	4.69
PF03401	TctC	1.56
PF13467	RHH_4	1.56
PF13545	HTH_Crp_2	0.78
PF00239	Resolvase	0.78
PF13565	HTH_32	0.78
PF02735	Ku	0.78
PF13751	DDE_Tnp_1_6	0.78
PF13358	DDE_3	0.78
PF13683	rve_3	0.78

COG ID	Name	Functional Category	% Frequency in 128 Family Scaffolds
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	4.69
COG3181	Tripartite-type tricarboxylate transporter, extracytoplasmic receptor component TctC	Energy production and conversion [C]	1.56
COG1273	Non-homologous end joining protein Ku, dsDNA break repair	Replication, recombination and repair [L]	0.78
COG1961	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	Replication, recombination and repair [L]	0.78
COG2452	Predicted site-specific integrase-resolvase	Mobilome: prophages, transposons [X]	0.78

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	71.09 %
All Organisms	root	All Organisms	28.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	71.09 %
cellular organisms	root	All Organisms → cellular organisms	28.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	71.09 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	28.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	71.09 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	25.78 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.78 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	71.09 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	24.22 %
Blastocatellia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia	0.78 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	71.09 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	7.81 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	1.56 %
unclassified Blastocatellia	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia	0.78 %
Clostridia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	71.09 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	2.34 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1.56 %
Phyllobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae	1.56 %
Xanthobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae	0.78 %
Blastocatellia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	0.78 %
Methylobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae	0.78 %
Eubacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	71.09 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2.34 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1.56 %
Pseudolabrys	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys	0.78 %
Phyllobacterium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Phyllobacterium	0.78 %
Mesorhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium	0.78 %
Microvirga	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga	0.78 %
Oscillospiraceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Oscillospiraceae	0.78 %
Blastocatellia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	71.09 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2.34 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1.56 %
Mesorhizobium metallidurans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → Mesorhizobium metallidurans	0.78 %
Pseudobacteroides	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Oscillospiraceae → Pseudobacteroides	0.78 %
Pseudolabrys taiwanensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → Pseudolabrys taiwanensis	0.78 %
Phyllobacterium trifolii	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Phyllobacterium → Phyllobacterium trifolii	0.78 %
Microvirga tunisiensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga → Microvirga tunisiensis	0.78 %
Blastocatellia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	71.09 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2.34 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1.56 %
Pseudobacteroides cellulosolvens	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Oscillospiraceae → Pseudobacteroides → Pseudobacteroides cellulosolvens	0.78 %
Mesorhizobium metallidurans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → Mesorhizobium metallidurans	0.78 %
Pseudolabrys taiwanensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → Pseudolabrys taiwanensis	0.78 %
Phyllobacterium trifolii	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Phyllobacterium → Phyllobacterium trifolii	0.78 %
Microvirga tunisiensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga → Microvirga tunisiensis	0.78 %
Blastocatellia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	71.09 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2.34 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1.56 %
Pseudobacteroides cellulosolvens ATCC 35603 = DSM 2933	strain	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Oscillospiraceae → Pseudobacteroides → Pseudobacteroides cellulosolvens → Pseudobacteroides cellulosolvens ATCC 35603 = DSM 2933	0.78 %
Mesorhizobium metallidurans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → Mesorhizobium metallidurans	0.78 %
Pseudolabrys taiwanensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → Pseudolabrys taiwanensis	0.78 %
Phyllobacterium trifolii	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Phyllobacterium → Phyllobacterium trifolii	0.78 %
Microvirga tunisiensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga → Microvirga tunisiensis	0.78 %
Blastocatellia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	0.78 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2228664021\|ICCgaii200_c0870314	Not Available	1114	Open in IMG/M
3300000033\|ICChiseqgaiiDRAFT_c0847325	Not Available	679	Open in IMG/M
3300000787\|JGI11643J11755_11797725	Not Available	770	Open in IMG/M
3300001661\|JGI12053J15887_10062467	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2068	Open in IMG/M
3300002244\|JGI24742J22300_10057103	Not Available	713	Open in IMG/M
3300002568\|C688J35102_119804963	Not Available	780	Open in IMG/M
3300002568\|C688J35102_120916609	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2302	Open in IMG/M
3300004081\|Ga0063454_101477771	Not Available	580	Open in IMG/M
3300004153\|Ga0063455_101511102	Not Available	524	Open in IMG/M
3300004463\|Ga0063356_102214933	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → Pseudolabrys taiwanensis	837	Open in IMG/M
3300004480\|Ga0062592_101074927	Not Available	742	Open in IMG/M
3300005093\|Ga0062594_100963805	Not Available	815	Open in IMG/M
3300005328\|Ga0070676_10663958	Not Available	758	Open in IMG/M
3300005329\|Ga0070683_100652292	Not Available	1008	Open in IMG/M
3300005330\|Ga0070690_100035049	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Phyllobacterium → Phyllobacterium trifolii	3147	Open in IMG/M
3300005331\|Ga0070670_100177284	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1850	Open in IMG/M
3300005333\|Ga0070677_10480116	Not Available	670	Open in IMG/M
3300005339\|Ga0070660_100978764	Not Available	714	Open in IMG/M
3300005343\|Ga0070687_100212253	Not Available	1180	Open in IMG/M
3300005344\|Ga0070661_100786029	Not Available	780	Open in IMG/M
3300005436\|Ga0070713_100498975	Not Available	1148	Open in IMG/M
3300005436\|Ga0070713_100844302	Not Available	879	Open in IMG/M
3300005440\|Ga0070705_100073281	Not Available	2077	Open in IMG/M
3300005544\|Ga0070686_101292611	Not Available	609	Open in IMG/M
3300005564\|Ga0070664_101104864	Not Available	747	Open in IMG/M
3300005618\|Ga0068864_101524712	Not Available	672	Open in IMG/M
3300005764\|Ga0066903_107381931	Not Available	568	Open in IMG/M
3300006163\|Ga0070715_10515151	Not Available	687	Open in IMG/M
3300006844\|Ga0075428_101034287	Not Available	869	Open in IMG/M
3300009174\|Ga0105241_11735176	Not Available	607	Open in IMG/M
3300009177\|Ga0105248_10079347	All Organisms → cellular organisms → Bacteria	3689	Open in IMG/M
3300010166\|Ga0126306_11122348	Not Available	644	Open in IMG/M
3300010371\|Ga0134125_10976029	Not Available	929	Open in IMG/M
3300010371\|Ga0134125_11979715	Not Available	633	Open in IMG/M
3300011119\|Ga0105246_10327966	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → Mesorhizobium metallidurans	1246	Open in IMG/M
3300011120\|Ga0150983_13358779	Not Available	691	Open in IMG/M
3300012212\|Ga0150985_111287671	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1808	Open in IMG/M
3300012469\|Ga0150984_108756391	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Oscillospiraceae → Pseudobacteroides → Pseudobacteroides cellulosolvens → Pseudobacteroides cellulosolvens ATCC 35603 = DSM 2933	668	Open in IMG/M
3300012469\|Ga0150984_111616528	Not Available	547	Open in IMG/M
3300012469\|Ga0150984_116389174	Not Available	628	Open in IMG/M
3300012469\|Ga0150984_116405737	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	995	Open in IMG/M
3300012469\|Ga0150984_123333041	Not Available	1157	Open in IMG/M
3300012893\|Ga0157284_10285729	Not Available	534	Open in IMG/M
3300012902\|Ga0157291_10074185	Not Available	866	Open in IMG/M
3300012911\|Ga0157301_10234882	Not Available	636	Open in IMG/M
3300012951\|Ga0164300_10147846	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1097	Open in IMG/M
3300012955\|Ga0164298_11067723	Not Available	602	Open in IMG/M
3300012955\|Ga0164298_11156195	Not Available	583	Open in IMG/M
3300012957\|Ga0164303_10891554	Not Available	622	Open in IMG/M
3300012958\|Ga0164299_10029417	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2369	Open in IMG/M
3300012960\|Ga0164301_10065361	Not Available	1945	Open in IMG/M
3300012961\|Ga0164302_10617300	Not Available	789	Open in IMG/M
3300012984\|Ga0164309_11778259	Not Available	529	Open in IMG/M
3300012985\|Ga0164308_10148107	Not Available	1730	Open in IMG/M
3300012989\|Ga0164305_10428377	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1021	Open in IMG/M
3300013306\|Ga0163162_11076331	Not Available	910	Open in IMG/M
3300013308\|Ga0157375_11695061	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	748	Open in IMG/M
3300014325\|Ga0163163_10540568	Not Available	1227	Open in IMG/M
3300014745\|Ga0157377_10023019	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3297	Open in IMG/M
3300015372\|Ga0132256_102387490	Not Available	631	Open in IMG/M
3300015373\|Ga0132257_104109946	Not Available	529	Open in IMG/M
3300017792\|Ga0163161_11738095	Not Available	553	Open in IMG/M
3300018027\|Ga0184605_10022553	Not Available	2542	Open in IMG/M
3300018051\|Ga0184620_10177849	Not Available	699	Open in IMG/M
3300018051\|Ga0184620_10192394	Not Available	675	Open in IMG/M
3300018054\|Ga0184621_10046800	All Organisms → cellular organisms → Bacteria → Proteobacteria	1433	Open in IMG/M
3300018061\|Ga0184619_10377277	Not Available	645	Open in IMG/M
3300018071\|Ga0184618_10083779	Not Available	1224	Open in IMG/M
3300018071\|Ga0184618_10217404	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	802	Open in IMG/M
3300018465\|Ga0190269_11171351	Not Available	601	Open in IMG/M
3300018469\|Ga0190270_11227415	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	789	Open in IMG/M
3300018481\|Ga0190271_12099351	Not Available	673	Open in IMG/M
3300018481\|Ga0190271_12569784	Not Available	610	Open in IMG/M
3300019356\|Ga0173481_10615868	Not Available	573	Open in IMG/M
3300019867\|Ga0193704_1054664	Not Available	776	Open in IMG/M
3300019873\|Ga0193700_1025145	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	984	Open in IMG/M
3300021363\|Ga0193699_10205373	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	818	Open in IMG/M
3300021363\|Ga0193699_10378201	Not Available	588	Open in IMG/M
3300021510\|Ga0222621_1103825	Not Available	603	Open in IMG/M
3300025898\|Ga0207692_10215080	Not Available	1137	Open in IMG/M
3300025901\|Ga0207688_10608744	Not Available	689	Open in IMG/M
3300025903\|Ga0207680_11348322	Not Available	507	Open in IMG/M
3300025905\|Ga0207685_10522843	Not Available	627	Open in IMG/M
3300025907\|Ga0207645_10961121	Not Available	579	Open in IMG/M
3300025915\|Ga0207693_10208585	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1536	Open in IMG/M
3300025915\|Ga0207693_10401822	Not Available	1071	Open in IMG/M
3300025925\|Ga0207650_10153393	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1820	Open in IMG/M
3300025927\|Ga0207687_10669911	Not Available	879	Open in IMG/M
3300025945\|Ga0207679_10365472	Not Available	1261	Open in IMG/M
3300026095\|Ga0207676_12064165	Not Available	569	Open in IMG/M
3300026121\|Ga0207683_10275840	Not Available	1536	Open in IMG/M
3300027669\|Ga0208981_1181798	Not Available	530	Open in IMG/M
3300028708\|Ga0307295_10087464	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	832	Open in IMG/M
3300028711\|Ga0307293_10144359	Not Available	757	Open in IMG/M
3300028714\|Ga0307309_10180045	Not Available	548	Open in IMG/M
3300028717\|Ga0307298_10003742	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3614	Open in IMG/M
3300028717\|Ga0307298_10196594	Not Available	593	Open in IMG/M
3300028718\|Ga0307307_10022134	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1764	Open in IMG/M
3300028720\|Ga0307317_10152449	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	776	Open in IMG/M
3300028720\|Ga0307317_10292346	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	550	Open in IMG/M
3300028754\|Ga0307297_10104859	Not Available	933	Open in IMG/M
3300028755\|Ga0307316_10381411	Not Available	521	Open in IMG/M
3300028768\|Ga0307280_10068525	Not Available	1138	Open in IMG/M
3300028768\|Ga0307280_10368948	Not Available	532	Open in IMG/M
3300028771\|Ga0307320_10110275	Not Available	1050	Open in IMG/M
3300028784\|Ga0307282_10089030	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1422	Open in IMG/M
3300028791\|Ga0307290_10132804	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	911	Open in IMG/M
3300028791\|Ga0307290_10207868	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	717	Open in IMG/M
3300028793\|Ga0307299_10018273	All Organisms → cellular organisms → Bacteria → Proteobacteria	2506	Open in IMG/M
3300028796\|Ga0307287_10179838	Not Available	803	Open in IMG/M
3300028796\|Ga0307287_10340790	Not Available	565	Open in IMG/M
3300028799\|Ga0307284_10132433	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	952	Open in IMG/M
3300028807\|Ga0307305_10066260	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1666	Open in IMG/M
3300028811\|Ga0307292_10094475	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga → Microvirga tunisiensis	1169	Open in IMG/M
3300028811\|Ga0307292_10254958	Not Available	729	Open in IMG/M
3300028819\|Ga0307296_10402015	Not Available	748	Open in IMG/M
3300028824\|Ga0307310_10032157	All Organisms → cellular organisms → Bacteria	2113	Open in IMG/M
3300028876\|Ga0307286_10081914	Not Available	1121	Open in IMG/M
3300028876\|Ga0307286_10329987	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	566	Open in IMG/M
3300028885\|Ga0307304_10044867	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1615	Open in IMG/M
3300028889\|Ga0247827_10992847	Not Available	570	Open in IMG/M
3300030904\|Ga0308198_1078163	Not Available	552	Open in IMG/M
3300031124\|Ga0308151_1047851	Not Available	515	Open in IMG/M
3300031199\|Ga0307495_10194995	Not Available	553	Open in IMG/M
3300031421\|Ga0308194_10082437	Not Available	892	Open in IMG/M
3300031424\|Ga0308179_1060325	Not Available	509	Open in IMG/M
3300031820\|Ga0307473_11342578	Not Available	537	Open in IMG/M
3300034681\|Ga0370546_055146	Not Available	622	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	73.44%
Host-Associated	Host-Associated	26.56%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	67.19%
Plants	Host-Associated → Plants	26.56%
Aquatic	Environmental → Aquatic	6.25%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	67.19%
Rhizosphere	Host-Associated → Plants → Rhizosphere	17.97%
Rhizoplane	Host-Associated → Plants → Rhizoplane	7.81%
Sediment	Environmental → Aquatic → Sediment	6.25%
Roots	Host-Associated → Plants → Roots	0.78%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	51.56%
Loam	Environmental → Terrestrial → Soil → Loam	15.62%
Soil	Host-Associated → Plants → Rhizosphere → Soil	12.50%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	6.25%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	5.47%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	5.47%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.56%
Soil	Host-Associated → Plants → Rhizoplane → Soil	0.78%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.78%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	46.09%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	12.50%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	9.38%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	6.25%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	5.47%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	5.47%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	3.12%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	3.12%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	2.34%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.56%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.56%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	0.78%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	0.78%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	0.78%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.78%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	43.75%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	6.25%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	5.47%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	3.91%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	3.12%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	3.12%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	2.34%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	2.34%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	2.34%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	2.34%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	2.34%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.56%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.56%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.56%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	1.56%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.56%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.56%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.56%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.78%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	0.78%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.78%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	0.78%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.78%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.78%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.78%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	0.78%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	0.78%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	0.78%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	0.78%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.78%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.78%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.78%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.78%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2228664021	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000033	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000787	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300001661	Mediterranean Blodgett CA OM1_O3 (Mediterranean Blodgett coassembly)	Environmental	Open in IMG/M
3300002244	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M1	Host-Associated	Open in IMG/M
3300002568	Grasslands soil microbial communities from Hopland, California, USA - 2	Environmental	Open in IMG/M
3300004081	Grasslands soil microbial communities from Hopland, California, USA - 2 (version 2)	Environmental	Open in IMG/M
3300004153	Grasslands soil microbial communities from Hopland, California, USA (version 2)	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300004480	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005328	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG	Host-Associated	Open in IMG/M
3300005329	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG	Environmental	Open in IMG/M
3300005330	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG	Environmental	Open in IMG/M
3300005331	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG	Host-Associated	Open in IMG/M
3300005333	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG	Host-Associated	Open in IMG/M
3300005339	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG	Host-Associated	Open in IMG/M
3300005343	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG	Environmental	Open in IMG/M
3300005344	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG	Host-Associated	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005544	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG	Environmental	Open in IMG/M
3300005564	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG	Host-Associated	Open in IMG/M
3300005618	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2	Host-Associated	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006163	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG	Environmental	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300009174	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG	Host-Associated	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300010166	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot27	Environmental	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300011119	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG	Host-Associated	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012893	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S059-202B-1	Environmental	Open in IMG/M
3300012902	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S169-409C-1	Environmental	Open in IMG/M
3300012911	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S088-202R-2	Environmental	Open in IMG/M
3300012951	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MG	Environmental	Open in IMG/M
3300012955	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MG	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300012984	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MG	Environmental	Open in IMG/M
3300012985	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MG	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300014325	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG	Host-Associated	Open in IMG/M
3300014745	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300017792	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG	Host-Associated	Open in IMG/M
3300018027	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_coex	Environmental	Open in IMG/M
3300018051	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_5_b1	Environmental	Open in IMG/M
3300018054	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_b1	Environmental	Open in IMG/M
3300018061	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_b1	Environmental	Open in IMG/M
3300018071	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_b1	Environmental	Open in IMG/M
3300018465	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 IS	Environmental	Open in IMG/M
3300018469	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 T	Environmental	Open in IMG/M
3300018481	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 356 T	Environmental	Open in IMG/M
3300019356	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S073-202C-2 (version 2)	Environmental	Open in IMG/M
3300019867	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3m1	Environmental	Open in IMG/M
3300019873	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3s1	Environmental	Open in IMG/M
3300021363	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3c2	Environmental	Open in IMG/M
3300021510	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_coex	Environmental	Open in IMG/M
3300025898	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025901	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes)	Host-Associated	Open in IMG/M
3300025903	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025905	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025907	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025925	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025927	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025945	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026095	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026121	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300027669	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM1_M1 (SPAdes)	Environmental	Open in IMG/M
3300028708	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_152	Environmental	Open in IMG/M
3300028711	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_150	Environmental	Open in IMG/M
3300028714	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_196	Environmental	Open in IMG/M
3300028717	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_158	Environmental	Open in IMG/M
3300028718	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_194	Environmental	Open in IMG/M
3300028720	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_357	Environmental	Open in IMG/M
3300028754	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_157	Environmental	Open in IMG/M
3300028755	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_356	Environmental	Open in IMG/M
3300028768	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_119	Environmental	Open in IMG/M
3300028771	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_369	Environmental	Open in IMG/M
3300028784	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_121	Environmental	Open in IMG/M
3300028791	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_144	Environmental	Open in IMG/M
3300028793	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_159	Environmental	Open in IMG/M
3300028796	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_141	Environmental	Open in IMG/M
3300028799	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_123	Environmental	Open in IMG/M
3300028807	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_186	Environmental	Open in IMG/M
3300028811	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_149	Environmental	Open in IMG/M
3300028819	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_153	Environmental	Open in IMG/M
3300028824	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_197	Environmental	Open in IMG/M
3300028876	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_140	Environmental	Open in IMG/M
3300028885	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_185	Environmental	Open in IMG/M
3300028889	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day2	Environmental	Open in IMG/M
3300030904	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_202 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031124	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_140 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031199	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 7_S	Environmental	Open in IMG/M
3300031421	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_195 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031424	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_150 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300034681	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_121 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
ICCgaii200_08703143	2228664021	Soil	MPIRSLLSETGFNSDQTEMIAKAFDEAWAELQGGLSEPAMSSLVRTALAXXIIEVXQRDGMTAEKLRADAIAHIKNNPLWPPL
ICChiseqgaiiDRAFT_08473252	3300000033	Soil	MPIRSLLSETGFNSDQTEMIAKAFDEAWAELQGGLSEPAMSSLVRTALAKRIIEVAQRDGMTXXXLRXDAIAXIKNNPLWPAL*
JGI11643J11755_117977251	3300000787	Soil	MPIGSLLSETGFNSGQTEMIAKAFDEAWAELQGGLSEPAMSSLVRTALAXXIIEVXQRDGMTAEKLRADAIAHIKNNPLWPAL*
JGI12053J15887_100624675	3300001661	Forest Soil	MPIRSLLSETSFNSDQTEKIAKAFDDAWAQIQGEQAEPAMSSLVRTALAKRIKETAQRSDLDARKLRDDAIAHIKNNPLWPTP*
JGI24742J22300_100571033	3300002244	Corn, Switchgrass And Miscanthus Rhizosphere	FNPDQTEMIAKAFDDAWAQLQGDEAEPAMASLVRTALAKRIIETAQRPGIDVQKLRDDAVAYVKNNPLWPTPS*
C688J35102_1198049631	3300002568	Soil	MPIRSLLAETSFNPEQTEMIAKAFDDAWARLQIDEAEPAMASLVRTALAKRIIETAERPGIDVQMLRDDAIAHVRNNPLWPTP*
C688J35102_1209166092	3300002568	Soil	MPIRSLLAETNFNAEQTEMIAKAFDDAWARLQGDEADPAMASLVRTALAKRIIETAQRPGIDVQKLRDDAIAYVKNNPLWPTP*
Ga0063454_1014777712	3300004081	Soil	MPIRSLLKQTSFNSDQTAMITKAFDDAWAKLKGDGSDLAMASLVRTALAKRILEMALREGMNAQKLRDDAIAHIKENPLWPVP*
Ga0063455_1015111021	3300004153	Soil	MPTRSLLKETRFNSDQTEIIAKAFDDAWAKLKGDGSDLAMASLVRTALAKRILEMAQREGMNAQKLRDDAIAHIKENPLWPIP*
Ga0063356_1022149333	3300004463	Arabidopsis Thaliana Rhizosphere	VMPIRSLLSETGFNSDQTEMIAKAFDEAWAELQGGLSEPAMSSLVRTALAKRIIEVAQRDGMTAEKLRADAIAYIKNNPLWPAL*
Ga0062592_1010749271	3300004480	Soil	KEWVMPIRSLLSETGFNSDQTEMIAKAFDEAWAELQGGLSEPAMSSLVRTALAKRIIEVAQRDGMTVKTLRDDAIAHIKNNPLWPAL*
Ga0062594_1009638052	3300005093	Soil	MPIRSLLSETGFNSDQTEMIAKAFDEAWAELQGGLSEPAMSSLVRTALAKRIIEVAQRDGMTAEKLRADAIAHIKNNPLWPAL*
Ga0070676_106639581	3300005328	Miscanthus Rhizosphere	MPIRSLLSQTSFNPDQTEMIAKAFDDAWAQLQGDEAEPAMASLVRTALAKRILETAQRPGIDVQKLRDDAVAYVKNNPLWPTPS*
Ga0070683_1006522922	3300005329	Corn Rhizosphere	QTSFNPDQTEMIAKAFDDAWAELGDEADPAMASLVRTALAKRIIETAQRPGIDVQKLRDDAVAYVKNNPLWPTPS*
Ga0070690_1000350493	3300005330	Switchgrass Rhizosphere	MPIRSLLSQTSFNPDQTEMIAKAFDDAWAELGDEADPAMASLVRTALAKRILETAQRPGIDVQKLRDDAVAYVKNNPLWPTPS*
Ga0070670_1001772845	3300005331	Switchgrass Rhizosphere	MPIRSLLSETGFNSDQTEMIAKAFDEAWAELQGGLSEPAMSSLVRTALAKRIIEVAQRDGMTVKTLRDDAIAHIKNNPLWPAL*
Ga0070677_104801162	3300005333	Miscanthus Rhizosphere	SAMPIRSLLSQTSFNPDQTEMIAKAFDDAWAHLGDEADPAMASLVRTALAKRIIETAQRPGIDVQKLRDDAVAYVKNNPLWPTPS*
Ga0070660_1009787643	3300005339	Corn Rhizosphere	SFNPDQTEMIAKAFDDAWAQLQGDEAEPAMASLVRTALAKRIIETAQRPGIDVQKLRDDAVAYVKNNPLWPTPS*
Ga0070687_1002122533	3300005343	Switchgrass Rhizosphere	MPIRSLLSETGFNSDQTEMAAKAFDEAWAELQGGLSEPAMSSLVRTALAKRIIEMAQRDGMTAKKLRDDAIAH
Ga0070661_1007860293	3300005344	Corn Rhizosphere	MPIRSLLSETGFNSDQTEMIAKAFDEAWAELQGGLSEPAMSSLIRTALAKRIIEVAQRDGMTAEKLRADAIAHIKNNPLWPAL*
Ga0070713_1004989752	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MPLKSLLSETSFDANQTEIMAKAFDDAWAQIQRENDPTMASLVRTAIAKRIIETAQREGTNVRTLCDDAVAYARNTPLWPAT*
Ga0070713_1008443021	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MPLKSLLPETGFNADQTGIIAKAFDDAWAQIQRENDPAMAPLIRTAIAKRIIETAQREGTDARTLCDDAIAYARNTPLWPAL*
Ga0070705_1000732814	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	MPIRSLLSETGFNSDQTEMIAKAFDEAWAEVQGGLSEPAMSSLVRTAVAKRIIEVAQRDGMTAEKLRADAIAHIKNNPLWPAL*
Ga0070686_1012926111	3300005544	Switchgrass Rhizosphere	WLRVRSHFQLHSERVMPIRSLLSETGFNSDQTEMIAKAFDEAWAELQGGLSEPAMSSLVRTALAKRIIEVAQRDGMTAEKLRADAIAHIKNNPLWPAL*
Ga0070664_1011048642	3300005564	Corn Rhizosphere	MPIRSLLSETGFNSDQTEMIAKAFDEAWAELQGGLSEPAMSSLVRTALAKRIIEVAPRDGMTAEKLRADAIAHIKNNPLWPAL*
Ga0068864_1015247121	3300005618	Switchgrass Rhizosphere	MPIRSLLSETGFNSDQTEMIAKAFDEAWAELQGGLSEPAMSSLVRTALAKRIIEVAQRDGMTAERLRADAIAHMGTSNNSTPGGET
Ga0066903_1073819311	3300005764	Tropical Forest Soil	MPLKSLLPETGLNAEQTDIIAKAFDDAWAQIQGESDPAMASLIRTAIAKRIIATAQREGTDARRLCDDAVAYARNTPLWPAL*
Ga0070715_105151512	3300006163	Corn, Switchgrass And Miscanthus Rhizosphere	MSDVLPIRSLLSETSFNSDQTEMIAKAFDDAWAELQGGLAEPTMSSLVRTIGCRQAHYRNGPSDGMTAKKLRDDAIAHIKNNPLWHAL*
Ga0075428_1010342872	3300006844	Populus Rhizosphere	MPIRSLLSETGFNSDQTEMIAKAFDEAWAEIQGGLSEPAMSSLVRTALAKRIIEVAQRDGMTAENLRADAIAHIKNNPLWPAL*
Ga0105241_117351761	3300009174	Corn Rhizosphere	MPIRSLLSETSFNSDQTEMIAKAFDDAWAELQGGLAEPTMSSLVRTIGSRQAHYRNGPSDGMTAKKLRDDAIAHIKNNPLWHAL*
Ga0105248_100793474	3300009177	Switchgrass Rhizosphere	MPIRSLLSQTSFNPDQTEMIAKAFDDAWAELGDEADPTMASLVRTALAKRILETAQRPGIDVQKLRDDAVAYVKNNPLWPTPS*
Ga0126306_111223481	3300010166	Serpentine Soil	MPIRSLLSQTSFNPDQTEMIAKAFDDAWAQLGDEADPAMASLVRTALAKRIIETARRPGIDPQKLRDDAIAYVKNNPLWPTSW*
Ga0134125_109760291	3300010371	Terrestrial Soil	MPIRSLLSQTSFNPDQTEMIAKAFDDAWAHLGDEADPAMASLVRTALAKRIIETAQRPGIDVQKLRDDAVAYVKNNPLWPTPS*
Ga0134125_119797152	3300010371	Terrestrial Soil	EQTEMIAKAFDDAWARLQGDEADPAMASLVRTALAKQIIETAQRPGIDPQKLRDDAIAYVKNNPLWPTP*
Ga0105246_103279661	3300011119	Miscanthus Rhizosphere	MPIRSLLSETGFNSDQTEMIAKAFDEAWAELQGGLSEPAMSSLVRTALAKRIIDVAQRDGMTVKTLRDDAIAHIKNNPL
Ga0150983_133587792	3300011120	Forest Soil	MPLKSLLSETSFDANQTEIIAKAFDDAWAQIQRENYPTMASLVRTAIAKRIIETAQREGTNVRTLCDDAVAYARNTPLWPAT*
Ga0150985_1112876711	3300012212	Avena Fatua Rhizosphere	MPIRSLLAETNFNAEQTEMIAKAFDDAWARLQGDEADPAMASLVRTALSKRIIETAQRPGIDVQKLRDDAIAYVKNNPLWPTP*
Ga0150984_1087563912	3300012469	Avena Fatua Rhizosphere	AMPIRSLLSQTSFNPDQTEMIAKAFDDAWAHLGDEADPAMASLVRTALAKRIIETAQRPGIDPQKLRDDAIAYVKNNPLWPTP*
Ga0150984_1116165281	3300012469	Avena Fatua Rhizosphere	MPIRSLLSEARFKPEQTEVIVKAFDDAWDQLRGEQSDPAMESLLRTALAKRIIETAHRSDMDAQALRDEAL
Ga0150984_1163891742	3300012469	Avena Fatua Rhizosphere	VSNDEPRHSVSICIMPIRSLLAETSFDPEQTEMIAKAFDDARAKLQIDDAEPAMASLVRTALAKRIIEVAHRPGLDVQKLRDDAVAYVKNNPLWPVLWKDPP*
Ga0150984_1164057371	3300012469	Avena Fatua Rhizosphere	MPIKSLLSEAKFNSDQTAMVSKAFDDAWAQLQSAQTEPAMASLVRTALAKWIIEMAERPGMNAHKLREDAIAYVKNNPLWPAV*
Ga0150984_1233330411	3300012469	Avena Fatua Rhizosphere	MPIRSLLAETSFNAEQTEMIAKAFDDAWARLQGDEADPAMASLVRTALAKRIIETAQRPGIDVQKLRDDAIAYVKNNPLWPTP*
Ga0157284_102857291	3300012893	Soil	MPIRSLLSETGFNSDQTEMIAKAFDESWAELQGGQAEPAMSSLVRTALAKRIIETAQRGGMTAEMLRDDAIAHIKNNPLWPAL*
Ga0157291_100741852	3300012902	Soil	MPIRSLLSETGFNSDQTEMIAKAFDESWAELQGGQAEPAMSSLVRTALAKRIIETAQRGGMTAEKLRDDAIA
Ga0157301_102348821	3300012911	Soil	MPIRSLLSETGFNSDQTEMIAKAFDESWAELQGGQAEPAMSSLVRTALAKRIIEVAQGDGMTAEKLRADAIAHIKNNPLWPA
Ga0164300_101478463	3300012951	Soil	MSDVLPIRSLLSETSFNSDQTEMIAKAFDDAWAELQGGLAEPTMSSLVRTIGSRQAHYRNGPSDGMTAKKLRDDAIAHIKNNPLWHAL*
Ga0164298_110677231	3300012955	Soil	MPIRSLLSQTSFNPDQKMIAKAFDDAWAQLGDEADPAMASLVRTALAKRIIETAQRPGIDVQKLRDDAVAYVKNNPLWPTPS*
Ga0164298_111561951	3300012955	Soil	MPIRSLLSQTSFNPDQTEMIAKAFDDAWAHLGDEADPAMASLVRTALAKRIIETAQRPGIDPQKLRDDAIAYVKNNPLWPTPY*
Ga0164303_108915542	3300012957	Soil	MSDVLPIRSLLSETSFNSDQTEMIAKAFDDAWAELQCGLAEPTMSSLVRTIGSRQAHYRNGPRDGMTAKTLRDDAIAHIKN
Ga0164299_100294171	3300012958	Soil	MSDVLPIRSLLSETSFNSDQTEMIAKAFDDAWAELQGGLAEPTMSSLVRTIGSRQAHYRNGPRDGMTAKKLRDDAIAHIKNNPLWHAL*
Ga0164301_100653611	3300012960	Soil	MPIRSLLTQTSFNPDQTEMIAKAFDDAWAHLGDEADPAMASLVRTALAKRIIETAQRPGIDPQKLRDDAIAYVKNNPLWPTP*
Ga0164302_106173001	3300012961	Soil	MPIRSLLSQTSFNPDQTEMIAKAFDDAWAHLGDEADPAMASLVRTALAKRIIETAQRPGIDPQKLRDDAIAYVKNNPLWPTP*
Ga0164309_117782591	3300012984	Soil	MPIRSLLSETSFNSDQTEMIAKAFDDAWAELQGGQAEPAMSSLVRTALAKRIIETAQRDGMTAKKLRDDAIAHIKNNPLWPAL*
Ga0164308_101481071	3300012985	Soil	MPIRSLLSETSFNTEQTEMIAEAFDGAWAQLQIDEAEPAMASLVRTALAKRIIEMAHRPGLDVQKLRDDAVAYVKNNPLWPALWKDPP*
Ga0164305_104283774	3300012989	Soil	FNSDQTEMIAKAFDDAWAELQGGQAEPAMSSLVRTALAKRIIETAQRDGMTAKKLRDDAIAHIKNNPLWPAL*
Ga0163162_110763312	3300013306	Switchgrass Rhizosphere	MPIRSLLSETSFNSDQTEMIAKAFDESWAELQGGQAEPAMSSLVRTALAKRIIETAQRDGMTAKKLRDDAIAHIKNNPLWPAL*
Ga0157375_116950611	3300013308	Miscanthus Rhizosphere	MPIRSLLSETSFNSDQTEMIAKAFDESWAELQGGQAEPAMSSLVRTALAKRIIETAQRGGMTAEMLRDDAIAHIKNNPLWPAL*
Ga0163163_105405681	3300014325	Switchgrass Rhizosphere	SFDPEQTEMIAKAFDDSWAKLQIDEAEPAMASLVRTALAKPIIEMANRPGLDVQKLRDDAIAYVKNNPLWPALWKAPP*
Ga0157377_100230195	3300014745	Miscanthus Rhizosphere	MPIRSLLSQTSFNPDQTEMIAKAFDDAWAQLQGDEAEPAMASLVRTALAKRIIETAQRPGIDVQKLRDDAVPYVKNNPLWPTPSSIDIRPEGHPGL*
Ga0132256_1023874902	3300015372	Arabidopsis Rhizosphere	RWLRVRSTFAFKERVMPIRSLLSETGFSSDQTEMIAKAFDEAWAEIQVRLSEPAMSSLVRTALAKRIIEVAQRDGMTAEKLRADAIAHIKNNPLWPAL*
Ga0132257_1041099461	3300015373	Arabidopsis Rhizosphere	MPIRSLLSQTSFNPDQTEMIAKAFDDAWAELGDEADPAMASLVRTALAKRIIETAQRPGIDVQKLRDDA
Ga0163161_117380951	3300017792	Switchgrass Rhizosphere	MPIRSLLSQTSFNPDQTEMIAKAFDDAWAELGDEAEPAMASLVRTALAKRIIETAQRPGIDVQKLRDDAVA
Ga0184605_100225532	3300018027	Groundwater Sediment	MPIRSLLSEARFNADQTEMIAKAFDDAWAQLQGAEAEPAMASLVRTALAKRIIETAQRPGVDAQKLRDDAIAYVKNNPLWPTP
Ga0184620_101778491	3300018051	Groundwater Sediment	TSFNPDQTEMIAKAFDDAWAQLGDEADPAMATLVRTALAKRIIETAQRPGIDPQKLRDDAIAYVKNNPLWPSPS
Ga0184620_101923941	3300018051	Groundwater Sediment	MPIRSLLSETSFNTDQTEMIVKAFDDAWAQVQIDEAEPAMASLVRTALAKRIIEMAHRPGVDVQKLRDDAIAYVKNYPLWPSLWRAPP
Ga0184621_100468001	3300018054	Groundwater Sediment	MRIMPIRSLLSETSFNTDQTEMIVKAFDDAWAQVQIDEAEPAMASLVRTALAKRIIEMAHRPGVDVQKLRDDAIAYVKNNPLWPSLWRAPP
Ga0184619_103772772	3300018061	Groundwater Sediment	MRIMPIRSLLSETSFNTDQTEMIVKAFDDAWAQVQIDEAEPAMASLVRTALAKRIIEMAHRPGVDVEKLRDDAIAYV
Ga0184618_100837792	3300018071	Groundwater Sediment	MSIMPIRSLLSETSFNTDQTEMIVKAFDDAWAKVQIDEAEPAMASLVRTSLAKRIIEMAHHPGVDVQKLRDDAIAYVKNNPLWPSLWRAPP
Ga0184618_102174042	3300018071	Groundwater Sediment	MPIRSLLSEARFNADQTEMIAKAFDDAWAQLQGAEAEPAMASLVRTALAKRIIETAQRPGIDAQKLRDDAIAYVKNNPLWPTP
Ga0190269_111713511	3300018465	Soil	MPIRSLLSQTSFNPDQTEMIAKAFDDAWAQLGDEADPAMASLVRTALARRIIETAQRPGIDPQKLRDDAIAYVKNNPLWPTPS
Ga0190270_112274152	3300018469	Soil	MPIRSLLPETSFNPEQTEMIAKAFDDAWARLQIDEAEPAMASLVRTALAKRIIETAQRPGIDVQMLRDDAIAHVRNNPLWPTP
Ga0190271_120993511	3300018481	Soil	MPIRSLLAETNFNAEQTEMIAKAFDDAWARLQGDEADPAMASLVRTALAKRIIETAQRPGIDVQKLRDDAIAYVKNNPLWPAP
Ga0190271_125697841	3300018481	Soil	MPIRSLLSQTSFNTDQTEMIAKAFDDAWVQLQGDEVDPAMASLVRTALAKRIIETAQRPGIDAQKLRDDAVAYVKNNPLWPTP
Ga0173481_106158681	3300019356	Soil	FNSDQTEMIAKAFDESWAELQGGQAEPAMSSLVRTALAKRIIETAQRGGMTAEKLRDDAIAHIKNNPLWPAL
Ga0193704_10546641	3300019867	Soil	MSIMPIRSLLSETSFNTDQTEMIVKAFDDAWAQVQIDEAEPAMASLVRTALAKRIIEMAHRPGVDVQKLRDDAIAYVKNNPLWPSLWRAPP
Ga0193700_10251451	3300019873	Soil	GSCASCRYDPSSRKTSFNTDQTEMIVKAFDDAWAQVQIDEAEPAMASLVRTSLAKRIIEMAHHPGVDVQKLRDDAIAYVKNNPLWPSLWRAPS
Ga0193699_102053732	3300021363	Soil	MPIRSLLSETSFNTDQTEMIVKAFDDAWAQVQIDEAEPAMASLVRTALAKRIIEMAHHPGVDVQKLRDDAIAYVKNNPLWPSL
Ga0193699_103782011	3300021363	Soil	MPIRSLLSETSFNSDQTEKIAKAFDDAWAQIQGEQAEPAMSSLVRTALAKRIMETAQRPDIDARKLRDDAIAHIKNNPLWPTP
Ga0222621_11038251	3300021510	Groundwater Sediment	MPIRSLLSETSFNTDQTEMIVKAFDDAWAQVQIDEAEPAMASLVRTALAKRIIEMAHRPGVDVQKLRDDAIAYVKNNPLWPSLWRARHDSAQ
Ga0207692_102150804	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	MPLKSLLPETGFNADQTGIIAKAFDDAWAQIQRENDPAMAPLIRTAIAKRIIETAQREGTDARTLCDDAIAYARRRRGRGSGRR
Ga0207688_106087442	3300025901	Corn, Switchgrass And Miscanthus Rhizosphere	MPIRSLLSETGFNSDQTEMIAKAFDEAWTELQGGLSEPAMSSLVRTALAKRIIEVAQGDGMTAEKLRADAIAHIKNNPLWPAL
Ga0207680_113483221	3300025903	Switchgrass Rhizosphere	MPIRSLLSETGFNSDQTEMIAKAFDEAWAELQGGLSEPAMSSLVRTAVAKRIIEVAQRDGMTVKTLRDDAIAQIKNNPLWPAL
Ga0207685_105228431	3300025905	Corn, Switchgrass And Miscanthus Rhizosphere	PIRPLLPETSFNSDQTEMIAKAVDDAWAELQGGLAEPAMSSLVRTIGSRQAHYRNGPSDGMTAKKLRDDAIAHIKNNPLWHAL
Ga0207645_109611211	3300025907	Miscanthus Rhizosphere	MPIRSLLSQTSFNPDQTEMIAKAFDDAWAQLQGDEAEPAMASLVRTALAKRIIETAQRPGIDVQKLRDD
Ga0207693_102085853	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	MPLKSLLSETSFDANQTEIMAKAFDDAWAQIQRENDPTMASLVRTAIAKRIIETAQREGTNVRTLCDDAVAYARNTPLWPAT
Ga0207693_104018221	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	MPLKSLLPETGFNADQTGIIAKAFDDAWAQIQRENDPAMAPLIRTAIAKRIIETAQREGTDARTLCDDAIAYARNTPLWPAL
Ga0207650_101533935	3300025925	Switchgrass Rhizosphere	MPIRSLLSETGFNSDQTEMIAKAFDEAWAELQGGLSEPAMSSLVRTALAKRIIEVAPRDGMTAEKLRADAIAHIKNN
Ga0207687_106699111	3300025927	Miscanthus Rhizosphere	MPIRSLLSQTSFNPDQTEMIAKAFDDAWAQLQGDEAEPAMASLVRTALAKRIIETAQRPGIDVQKLRDDA
Ga0207679_103654722	3300025945	Corn Rhizosphere	MPIRSLLSETGFNSDQTEMIAKAFDEAWAELQGGLSEPAMSSLVRTALAKRIIEVAPRDGMTAEKLRADAIAHIKNNPLWPAL
Ga0207676_120641651	3300026095	Switchgrass Rhizosphere	MPIRSLLSETGFNSDQTEMIAKAFDEAWAELQGGLSEPAMSSLVRTALAKRIIEVAQRDGMTAEKLRADAIAHIKNNPLWPAL
Ga0207683_102758403	3300026121	Miscanthus Rhizosphere	QTEMIAKALDDAWAQLGDEADPAMASLVRTALAKRIIETAQRPGIDVQKLRDDAVAYVKNNPLWPTPS
Ga0208981_11817981	3300027669	Forest Soil	MRIMPIRSLLSETSFNTDQTEMIAKAFDDAWAQVQIDEAEPAMASLVRTALAKRIIEMAHRPGVDVQKLRDDAIAYVKNNPLW
Ga0307295_100874643	3300028708	Soil	MPIRSLLSQTSFNPDQTEMIAKAFDDAWAQLGDEADPAMASLVRTALAKRIIETAQRPGIDPQKLRDDAIAYVKNNPLWPSPS
Ga0307293_101443591	3300028711	Soil	SQLSETSFNTDQTEMIVKAFDDAWAQVQIDEAEPAMASLVRTALAKRIIEMAHRPGVDVQKLRDDAIAYVKNNPLWPSLWRAPP
Ga0307309_101800452	3300028714	Soil	NPDQTEMIAKAFDDAWAQLGDEADPAMATLVRTALAKRIIETAQRPGIDPQKLRDDAIAYVKNNPLWPSPS
Ga0307298_100037421	3300028717	Soil	MPIRSLLSETSFNTDQTEMIVKAFDDAWAKVQIDEAEPAMASLVRTSLAKRIIEMAHHPGVDVQKLRDDAIAYVKNYPLWPSLWRAPP
Ga0307298_101965941	3300028717	Soil	MPIRSLLAETSFDPEQTEMIAKAFDDAWAKVQIDEAEPAMASLVRTALAKRIIEMAHRPGVDVQKLRDDAIA
Ga0307307_100221345	3300028718	Soil	APWFMSIMPIRSLLSETSFNTDQTEMIVKAFDDAWAKVQIDEAEPAMASLVRTSLAKRIIEMAHHPGVDVQKLRDDAIAYVKNYPLWPSLWRAPP
Ga0307317_101524492	3300028720	Soil	SAPWFMSIMPIRSLLSETSFNTDQTEMIVKAFDDAWAKVQIDEAEPAMASLVRTSLAKRIIEMAHHPGVDVQKLRDDAIAYVKNYPLWPSLWRAPP
Ga0307317_102923461	3300028720	Soil	MPIRSLLPETSFNPEQTEMIAKAFDDAWARLQIDEAEPAMASLVRTALAKRIIETAQRPGIDVQMLRD
Ga0307297_101048592	3300028754	Soil	MPIRSLLSQTSFNPDQTEMIAKAFDDAWAQLGDEADPAMATLVRTALAKRIIETAQRPGIDPQKLRDDAIAYVKNNPLWPSPS
Ga0307316_103814112	3300028755	Soil	DPEQTEMIAKAFDDAWAKLQIDEAEPAMASLVRTALAKRIIEMAQRPGLDVQKLRDDAVAYVKNNPLWPALWKDPP
Ga0307280_100685252	3300028768	Soil	FNPDQTEMIAKAFDDAWAQLGDEADPAMASLVRTALAKRIIETAQRPGIDAQKLRDDAVAYVKNNPLWPAP
Ga0307280_103689483	3300028768	Soil	PPLGHPIMPIRSLLSEARFNADQTEMIAKAFDDAWAQLQGAEAEPAMASLVRTALAKRIIETAQRPGVDAQKLRDDAIAYVKNNPLWPTP
Ga0307320_101102751	3300028771	Soil	MPIRSLLAETSFDPEQTEMIAKAFDDAWAKVQIDEAEPAMASLVRTALAKRIIEMAHRPGVDVQKLRD
Ga0307282_100890304	3300028784	Soil	RSETSFNTDQTEMIVKAFDDAWAKVQIDEAEPAMASLVRTSLAKRIIEMAHHPGVDVQKLRDDAIAYVKNYPLWPSLWRAPP
Ga0307290_101328042	3300028791	Soil	LSETSFNTDQTEMIVKAFDDAWAKVQIDEAEPAMASLVRTSLAKRIIEMAHHPGVDVQKLRDDAIAYVKNYPLWPSLWRAPP
Ga0307290_102078683	3300028791	Soil	MPIRSLLPETSFNPEQTEMIAKAFDDAWARLQIDEAEPAMASLVRTALAKRIIETAQRPGIDVQMLRDDAIAHVRN
Ga0307299_100182736	3300028793	Soil	ETSFDPEQTEMIAKAFDDAWTELQIAKDEPAMASLVRTALARRIIEMAHRPGVEVQKLRDDAIAYVKNNPLWPAP
Ga0307287_101798381	3300028796	Soil	MPIRSLLSETSFNTDQTEMIVKAFDDAWAQVQIDEAEPAMASLVRTALAKRIIEMAHRPGVDVQKLRDDAIAYVKNNPLWPSLWRAPP
Ga0307287_103407901	3300028796	Soil	SFDPEQTEMIAKAFDDAWTQLQSDEDEPAMASLVRTALDKRIIEMAHRPGVDVQKLRDDAIAYVKNNPLWPSLWRAPS
Ga0307284_101324331	3300028799	Soil	QLNTDQTEMIVKAFDDAWAKVQIDEAEPAMASLVRTSLAKRIIEMAHHPGVDVQKLRDDAIAYVKNYPLWPSLWRAPP
Ga0307305_100662605	3300028807	Soil	FMSIMPIRSLLSETSFNTDQTEMIVKAFDDAWAKVQIDEAEPAMASLVRTSLAKRIIEMAHHPGVDVQKLRDDAIAYVKNYPLWPSLWRAPP
Ga0307292_100944753	3300028811	Soil	HPIMPIRSLLSEARFNADQTEMIAKAFDDAWAQLQGAEAEPAMASLVRTALAKRIIETAQRPGVDAQKLRDDAIAYVKNNPLWPTP
Ga0307292_102549581	3300028811	Soil	MPIRSLLSETSFNTDQTEMIVKAFDDAWAQVQIDEAEPAMASLVRTALAKRIIEMAHRPGVDVQKLRDDAIAYVKNDPLWPSLWRAPP
Ga0307296_104020151	3300028819	Soil	MSIMPIRSLLSETSFNTDQTEMIVKAFDDAWAQVQIDEAEPAMASLVRTALAKRIIEMAHRPGVDVQKLRDDAI
Ga0307310_100321573	3300028824	Soil	VPPPLGHPIMPIRSLLSEARFNADQTEMIAKAFDDAWAQLQGAEAEPAMASLVRTALAKRIIETAQRPGVDAQKLRDDAIAYVKNNPLWPTP
Ga0307286_100819142	3300028876	Soil	PIRTLLAETSFNPEQTEMIAKAFDDAWTALQIDEDEPAMASLVRTALAKRIIEMAHRPGVDVHKLRDDAIAYVKNNPLWPTP
Ga0307286_103299873	3300028876	Soil	HPIMPIRSLLSEARFNADQTEMIAKAFDDAWAQLQGAEAEPAMASLVRTALAKRIIETAQRPGIDAQKLRDDAIAYVKNNPLWPTP
Ga0307304_100448671	3300028885	Soil	MSIMPIRSLLSETSFNTDQTEMIVKAFDDAWAKVQIDEAEPAMASLVRTSLAKRIIEMAHHPGVDVQKLRDDAIAYVKNYPLWPSLWRAPP
Ga0247827_109928471	3300028889	Soil	MPIRSLLSQTSFNTDQTEMIAKAFDDAWAQLQGDEADPAMASLVRTALAKRIIETAQRPGIDAQKLRDDAIAYVKNNPLWPTP
Ga0308198_10781631	3300030904	Soil	MPIRSLLSETSFNTDQTEMIVKAFDDAWAQVQIDEAEPAMASLVRTALAKRIIEMAHRPGVDVQTLRDDAIAYVKNNPLWPSLWRAPS
Ga0308151_10478511	3300031124	Soil	MPIRSLLSETSFNTDQTEMIVKAFDDAWAQVQIDEAEPAMASLVRTALAKRIIEMAHRPGVDVQKLRDDAIAYVNNNPLWPSRWRAPP
Ga0307495_101949951	3300031199	Soil	MPIRSLLSQTSFNPDQTEMIAKAFDDAWAELGDEAEPAMASLVRTALAKRIIETAQRPGIDVQKLRDD
Ga0308194_100824371	3300031421	Soil	MPIRSLLSETSFNTDQTEMIVKAFDDAWAQVQIDEAEPGMASLVRTALAKRIIEMAHRPGVDVQKLRDDAIAYVKNNPLWPSLWRAPP
Ga0308179_10603252	3300031424	Soil	GSSAPWFMSIMPIRSLLSETSFNTDQTEMIVKAFDDAWAKFQIDEAEPAMASLVRTSLAKRIIEMAHHPGVDVQKLRDDAIAYVKNNPLWPTP
Ga0307473_113425781	3300031820	Hardwood Forest Soil	MPIRSLLAETSFDPEQTEMIAKAFDDAWAKLQIDEAEPAMASLVRTALAKRIIEMAHRPGVDVQKLRDDAIASKITRSGRHF
Ga0370546_055146_3_335	3300034681	Soil	MPIRSLLSETSFNTDQTEMIVKAFDDAWAQVQIDEAEPAMASLVRTALAKRIIEMAHRPGVDVQKLRDDAIAYVKNNPLWPSLWRARHDSAQAVQRGDRHEGQQAPRVVEG

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F065161

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences