NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F065147

Metagenome / Metatranscriptome Family F065147

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F065147
Family Type Metagenome / Metatranscriptome
Number of Sequences 128
Average Sequence Length 55 residues
Representative Sequence MNRIELTLLGVAALASASPAFAGQPVPAPIAGVGIGAVVLVGIGYRALKRRINP
Number of Associated Samples 93
Number of Associated Scaffolds 117

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 69.35 %
% of genes near scaffold ends (potentially truncated) 31.25 %
% of genes from short scaffolds (< 2000 bps) 78.12 %
Associated GOLD sequencing projects 74
AlphaFold2 3D model prediction Yes
3D model pTM-score0.40

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Bacteria (61.719 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere
(14.844 % of family members)
Environment Ontology (ENVO) Unclassified
(46.875 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(71.875 % of family members)


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Multiple Sequence Alignments

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Transmembrane (alpha-helical) Signal Peptide: Yes Secondary Structure distribution: α-helix: 51.22%    β-sheet: 0.00%    Coil/Unstructured: 48.78%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.40
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 117 Family Scaffolds
PF04116FA_hydroxylase 34.19
PF09721Exosortase_EpsH 5.13
PF01979Amidohydro_1 2.56
PF03062MBOAT 1.71
PF13411MerR_1 1.71
PF13147Obsolete Pfam Family 1.71
PF02863Arg_repressor_C 0.85
PF02433FixO 0.85
PF00155Aminotran_1_2 0.85

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 117 Family Scaffolds
COG3000Sterol desaturase/sphingolipid hydroxylase, fatty acid hydroxylase superfamilyLipid transport and metabolism [I] 34.19
COG1438Arginine repressorTranscription [K] 0.85
COG2993Cbb3-type cytochrome oxidase, cytochrome c subunit FixOEnergy production and conversion [C] 0.85

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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms61.72 %
UnclassifiedrootN/A38.28 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300001976|JGI24752J21851_1057083All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas535Open in IMG/M
3300001990|JGI24737J22298_10022169All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas2018Open in IMG/M
3300002075|JGI24738J21930_10154534Not Available511Open in IMG/M
3300002244|JGI24742J22300_10059318Not Available701Open in IMG/M
3300003267|soilL1_10180868All Organisms → cellular organisms → Bacteria → Proteobacteria1091Open in IMG/M
3300004479|Ga0062595_100218164All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas1201Open in IMG/M
3300005093|Ga0062594_100090148All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas1782Open in IMG/M
3300005093|Ga0062594_100200150All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas1391Open in IMG/M
3300005166|Ga0066674_10047146All Organisms → cellular organisms → Bacteria1938Open in IMG/M
3300005166|Ga0066674_10047146All Organisms → cellular organisms → Bacteria1938Open in IMG/M
3300005184|Ga0066671_10153793All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas1343Open in IMG/M
3300005327|Ga0070658_10011752All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas7026Open in IMG/M
3300005327|Ga0070658_10145400All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas1982Open in IMG/M
3300005327|Ga0070658_10148603All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas1961Open in IMG/M
3300005327|Ga0070658_10880032All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas779Open in IMG/M
3300005327|Ga0070658_11203733Not Available658Open in IMG/M
3300005328|Ga0070676_10128880All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1597Open in IMG/M
3300005329|Ga0070683_101813891Not Available586Open in IMG/M
3300005329|Ga0070683_101911411Not Available570Open in IMG/M
3300005331|Ga0070670_100013312All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → unclassified Sphingomonas → Sphingomonas sp. URHD00577045Open in IMG/M
3300005339|Ga0070660_100033704All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria3862Open in IMG/M
3300005339|Ga0070660_100175711All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1732Open in IMG/M
3300005339|Ga0070660_101240286Not Available632Open in IMG/M
3300005340|Ga0070689_100231438Not Available1519Open in IMG/M
3300005344|Ga0070661_100062711All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria2729Open in IMG/M
3300005344|Ga0070661_100268829Not Available1320Open in IMG/M
3300005353|Ga0070669_101267849Not Available638Open in IMG/M
3300005364|Ga0070673_101188616Not Available714Open in IMG/M
3300005365|Ga0070688_100977728Not Available671Open in IMG/M
3300005434|Ga0070709_10361029All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas1076Open in IMG/M
3300005435|Ga0070714_100067515All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria3083Open in IMG/M
3300005454|Ga0066687_10137012Not Available1281Open in IMG/M
3300005454|Ga0066687_10137012Not Available1281Open in IMG/M
3300005457|Ga0070662_100124135All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas1982Open in IMG/M
3300005457|Ga0070662_100247323All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas1432Open in IMG/M
3300005529|Ga0070741_10197036All Organisms → cellular organisms → Bacteria1965Open in IMG/M
3300005530|Ga0070679_100617404All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas1027Open in IMG/M
3300005544|Ga0070686_101714586Not Available533Open in IMG/M
3300005547|Ga0070693_101400313Not Available544Open in IMG/M
3300005563|Ga0068855_101365987Not Available731Open in IMG/M
3300005568|Ga0066703_10103432All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas1677Open in IMG/M
3300005568|Ga0066703_10103432All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas1677Open in IMG/M
3300005575|Ga0066702_10016511All Organisms → cellular organisms → Bacteria → Proteobacteria3492Open in IMG/M
3300005575|Ga0066702_10539604Not Available706Open in IMG/M
3300005576|Ga0066708_10438139All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas839Open in IMG/M
3300005576|Ga0066708_10438139All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas839Open in IMG/M
3300005577|Ga0068857_101458305All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas666Open in IMG/M
3300005616|Ga0068852_102728753Not Available513Open in IMG/M
3300005616|Ga0068852_102842094Not Available502Open in IMG/M
3300005718|Ga0068866_10011055All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria3891Open in IMG/M
3300005718|Ga0068866_10197648All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas1199Open in IMG/M
3300005834|Ga0068851_10019774All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria3254Open in IMG/M
3300005841|Ga0068863_101917441All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas602Open in IMG/M
3300005843|Ga0068860_100122113All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas2495Open in IMG/M
3300006028|Ga0070717_10241429All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas1593Open in IMG/M
3300006046|Ga0066652_100220006All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas1645Open in IMG/M
3300006163|Ga0070715_10748497Not Available588Open in IMG/M
3300006358|Ga0068871_102251268Not Available519Open in IMG/M
3300006954|Ga0079219_12492789Not Available503Open in IMG/M
3300009101|Ga0105247_10032517All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas3169Open in IMG/M
3300009174|Ga0105241_10425498All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas1169Open in IMG/M
3300009177|Ga0105248_10697384Not Available1145Open in IMG/M
3300009551|Ga0105238_10824245All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas944Open in IMG/M
3300010375|Ga0105239_11645465All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas743Open in IMG/M
3300012212|Ga0150985_114470762Not Available1365Open in IMG/M
3300012212|Ga0150985_114470762Not Available1365Open in IMG/M
3300012469|Ga0150984_101041121Not Available834Open in IMG/M
3300012469|Ga0150984_102949733Not Available539Open in IMG/M
3300012469|Ga0150984_109452505Not Available588Open in IMG/M
3300012469|Ga0150984_111024632Not Available502Open in IMG/M
3300012469|Ga0150984_113996172Not Available588Open in IMG/M
3300012469|Ga0150984_114492227Not Available509Open in IMG/M
3300012469|Ga0150984_123552231Not Available1175Open in IMG/M
3300012955|Ga0164298_10168324All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas1250Open in IMG/M
3300012955|Ga0164298_10168324All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas1250Open in IMG/M
3300012955|Ga0164298_11290576Not Available558Open in IMG/M
3300013306|Ga0163162_10388463All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas1528Open in IMG/M
3300015195|Ga0167658_1014921All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria2274Open in IMG/M
3300015371|Ga0132258_13235336All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas1123Open in IMG/M
3300018433|Ga0066667_10399768All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas1110Open in IMG/M
3300018482|Ga0066669_10319640All Organisms → cellular organisms → Bacteria → Proteobacteria1271Open in IMG/M
3300018920|Ga0190273_10122676All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas1500Open in IMG/M
3300025315|Ga0207697_10007054All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas5031Open in IMG/M
3300025315|Ga0207697_10050757All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae1713Open in IMG/M
3300025321|Ga0207656_10046015All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas1870Open in IMG/M
3300025899|Ga0207642_10009494All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas3387Open in IMG/M
3300025900|Ga0207710_10221211All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas940Open in IMG/M
3300025903|Ga0207680_10000959All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas13596Open in IMG/M
3300025903|Ga0207680_10000959All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas13596Open in IMG/M
3300025909|Ga0207705_10081639All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas2356Open in IMG/M
3300025909|Ga0207705_10081639All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas2356Open in IMG/M
3300025917|Ga0207660_11015386Not Available676Open in IMG/M
3300025919|Ga0207657_10177750All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas1722Open in IMG/M
3300025920|Ga0207649_10733997Not Available768Open in IMG/M
3300025921|Ga0207652_10507981All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas1085Open in IMG/M
3300025923|Ga0207681_11750584Not Available519Open in IMG/M
3300025924|Ga0207694_10587152All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas937Open in IMG/M
3300025925|Ga0207650_10756993All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas822Open in IMG/M
3300025930|Ga0207701_10326836All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas1329Open in IMG/M
3300025932|Ga0207690_10155724All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1698Open in IMG/M
3300025935|Ga0207709_10900565Not Available719Open in IMG/M
3300025936|Ga0207670_11738942Not Available530Open in IMG/M
3300025941|Ga0207711_11791029Not Available557Open in IMG/M
3300025944|Ga0207661_11504254All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas617Open in IMG/M
3300025949|Ga0207667_10191469Not Available2099Open in IMG/M
3300025960|Ga0207651_10982964Not Available754Open in IMG/M
3300026041|Ga0207639_10262289All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas1512Open in IMG/M
3300026095|Ga0207676_11226491All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas744Open in IMG/M
3300026118|Ga0207675_100485991All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas1228Open in IMG/M
3300026142|Ga0207698_10400518All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas1311Open in IMG/M
3300026142|Ga0207698_11865727Not Available616Open in IMG/M
3300026142|Ga0207698_11865727Not Available616Open in IMG/M
3300026307|Ga0209469_1056399All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas1223Open in IMG/M
3300026312|Ga0209153_1155789All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas847Open in IMG/M
3300026527|Ga0209059_1013717All Organisms → cellular organisms → Bacteria → Proteobacteria3670Open in IMG/M
3300026527|Ga0209059_1013717All Organisms → cellular organisms → Bacteria → Proteobacteria3670Open in IMG/M
3300026527|Ga0209059_1013717All Organisms → cellular organisms → Bacteria → Proteobacteria3670Open in IMG/M
3300028379|Ga0268266_10072164All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas2993Open in IMG/M
3300031820|Ga0307473_11412454Not Available525Open in IMG/M
3300031938|Ga0308175_100968830All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas939Open in IMG/M
3300031939|Ga0308174_10165681All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas1658Open in IMG/M
3300031996|Ga0308176_11610307Not Available692Open in IMG/M
3300032074|Ga0308173_10441002All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas1155Open in IMG/M
3300034268|Ga0372943_0010515All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas4807Open in IMG/M


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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere14.84%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil13.28%
Corn RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere10.16%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere7.03%
Avena Fatua RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere5.47%
Corn RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere4.69%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil3.12%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil3.12%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere3.12%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere3.12%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere3.12%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere3.12%
Corn, Switchgrass And Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere3.12%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere3.12%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere3.12%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil2.34%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil1.56%
Avena Fatua RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere1.56%
SoilEnvironmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil0.78%
Glacier Forefield SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil0.78%
Surface SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil0.78%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil0.78%
Sugarcane Root And Bulk SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Sugarcane Root And Bulk Soil0.78%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Corn, Switchgrass And Miscanthus Rhizosphere0.78%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil0.78%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil0.78%
Agricultural SoilEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil0.78%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere0.78%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere0.78%
Miscanthus RhizosphereHost-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere0.78%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere0.78%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere0.78%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300001976Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S7Host-AssociatedOpen in IMG/M
3300001990Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3Host-AssociatedOpen in IMG/M
3300002075Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4Host-AssociatedOpen in IMG/M
3300002244Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M1Host-AssociatedOpen in IMG/M
3300003267Sugarcane bulk soil Sample L1EnvironmentalOpen in IMG/M
3300004479Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAsEnvironmentalOpen in IMG/M
3300005093Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All BlocksEnvironmentalOpen in IMG/M
3300005166Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_123EnvironmentalOpen in IMG/M
3300005184Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_120EnvironmentalOpen in IMG/M
3300005327Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaGHost-AssociatedOpen in IMG/M
3300005328Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaGHost-AssociatedOpen in IMG/M
3300005329Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaGEnvironmentalOpen in IMG/M
3300005331Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaGHost-AssociatedOpen in IMG/M
3300005338Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2Host-AssociatedOpen in IMG/M
3300005339Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaGHost-AssociatedOpen in IMG/M
3300005340Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaGEnvironmentalOpen in IMG/M
3300005344Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaGHost-AssociatedOpen in IMG/M
3300005353Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaGHost-AssociatedOpen in IMG/M
3300005364Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaGHost-AssociatedOpen in IMG/M
3300005365Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaGEnvironmentalOpen in IMG/M
3300005434Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaGEnvironmentalOpen in IMG/M
3300005435Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaGEnvironmentalOpen in IMG/M
3300005454Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_136EnvironmentalOpen in IMG/M
3300005457Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaGHost-AssociatedOpen in IMG/M
3300005529Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen16_06102014_R1EnvironmentalOpen in IMG/M
3300005530Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaGEnvironmentalOpen in IMG/M
3300005544Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaGEnvironmentalOpen in IMG/M
3300005547Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaGEnvironmentalOpen in IMG/M
3300005563Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2Host-AssociatedOpen in IMG/M
3300005568Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152EnvironmentalOpen in IMG/M
3300005575Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_151EnvironmentalOpen in IMG/M
3300005576Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157EnvironmentalOpen in IMG/M
3300005577Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2Host-AssociatedOpen in IMG/M
3300005616Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2Host-AssociatedOpen in IMG/M
3300005718Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2Host-AssociatedOpen in IMG/M
3300005834Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2Host-AssociatedOpen in IMG/M
3300005841Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2Host-AssociatedOpen in IMG/M
3300005843Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2Host-AssociatedOpen in IMG/M
3300006028Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaGEnvironmentalOpen in IMG/M
3300006046Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101EnvironmentalOpen in IMG/M
3300006163Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaGEnvironmentalOpen in IMG/M
3300006358Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2Host-AssociatedOpen in IMG/M
3300006954Agricultural soil microbial communities from Georgia to study Nitrogen management - GA ControlEnvironmentalOpen in IMG/M
3300009101Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaGHost-AssociatedOpen in IMG/M
3300009174Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaGHost-AssociatedOpen in IMG/M
3300009177Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaGHost-AssociatedOpen in IMG/M
3300009551Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaGHost-AssociatedOpen in IMG/M
3300010147Soil microbial communities from California, USA to study soil gas exchange rates - BB-CA-RED metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300010375Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaGHost-AssociatedOpen in IMG/M
3300012212Combined assembly of Hopland grassland soilHost-AssociatedOpen in IMG/M
3300012469Combined assembly of Soil carbon rhizosphereHost-AssociatedOpen in IMG/M
3300012955Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MGEnvironmentalOpen in IMG/M
3300013306Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaGHost-AssociatedOpen in IMG/M
3300015195Arctic soil microbial communities from a glacier forefield, Storglaci?ren, Tarfala, Sweden (Sample st-6c, vegetation/snow interface)EnvironmentalOpen in IMG/M
3300015371Combined assembly of cpr5 and col0 rhizosphere and soilHost-AssociatedOpen in IMG/M
3300018433Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116EnvironmentalOpen in IMG/M
3300018482Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118EnvironmentalOpen in IMG/M
3300018920Populus adjacent soil microbial communities from riparian zone of Shoshone River, Wyoming, USA - 504 ISEnvironmentalOpen in IMG/M
3300025315Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)Host-AssociatedOpen in IMG/M
3300025321Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300025899Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300025900Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025903Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025909Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025917Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025919Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025920Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025921Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025923Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025924Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025925Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025930Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)EnvironmentalOpen in IMG/M
3300025932Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025935Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025936Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025941Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025944Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025949Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300025960Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300026041Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026095Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026118Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026142Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026307Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_123 (SPAdes)EnvironmentalOpen in IMG/M
3300026312Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_120 (SPAdes)EnvironmentalOpen in IMG/M
3300026527Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_151 (SPAdes)EnvironmentalOpen in IMG/M
3300028379Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300031820Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515EnvironmentalOpen in IMG/M
3300031938Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R1EnvironmentalOpen in IMG/M
3300031939Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.P.R2EnvironmentalOpen in IMG/M
3300031996Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R2EnvironmentalOpen in IMG/M
3300032074Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.P.R1EnvironmentalOpen in IMG/M
3300034268Forest soil microbial communities from Eldorado National Forest, California, USA - SNFC_MG_FRD_1.2EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
JGI24752J21851_105708323300001976Corn, Switchgrass And Miscanthus RhizosphereMRRFENXVIGLAVLASASPAFAGNTVPAPIAGVGIGAVALIGLGYRALKRRINP*
JGI24737J22298_1002216933300001990Corn RhizosphereMRRFENVVIGLAVLASAXPAFAGNTVPAPIAGVGIGAVALIGLGYRALKRRINP*
JGI24738J21930_1015453423300002075Corn RhizosphereNWLSGPESEDQVMNRIELTLLGVAALASASPAFAGQPVPAPIAGVGIGAVVLVGIGYRALKRRINP*
JGI24742J22300_1005931813300002244Corn, Switchgrass And Miscanthus RhizosphereMNRIELTLLGVAALASASPAFAGQPVPAPIAGVGIGAVVLVGIGYRALKRRIN
soilL1_1018086823300003267Sugarcane Root And Bulk SoilMSRNEKIVLALALLGAASPAFAGIPQTPAPIAGIGIGAVLLVGIGYRALKSRINP*
Ga0062595_10021816433300004479SoilMNRIELTLLGVTALASASPAFAGQPVPAPIAGVGIGAVVLVGIGYRALKRRINP*
Ga0062594_10009014833300005093SoilMNRIEKIGLGLIMLTAASPAFAGDVVQTPAPIAGVGIGAIVLAGIGYRALKRRINP*
Ga0062594_10020015033300005093SoilMSRYERLALGLAMLGTAAPAFAGRTVPAPIAGVGVGAVLLMGLGYRALKSRINR*
Ga0066674_1004714623300005166SoilMTRLETTVLGLVMLGMASPAFAGGAPVPASIAGVGIGAVILAGVGYRALKRRINP*
Ga0066674_1004714633300005166SoilVSRLEKIALGLVLLTAASPAFAGTPVPAPIAGVGIGAVVLVGMGYRALKRRINP*
Ga0066671_1015379323300005184SoilMSRVEKVILGLVMLSAASPAFAGLEQPVPAPIAGVGIGAVLLVGAGYRAVKRRINR*
Ga0070658_1001175243300005327Corn RhizosphereMNRIELTLLGVAALASASPAFAGQPVPAPIAGVGIGAVVLVGIGYRALKRRINP*
Ga0070658_1014540033300005327Corn RhizosphereMKRIEAVVFGLAVLGISSPAFAGTAQVPAPIAGVGIGAVVLIGLGYRALKGRISR*
Ga0070658_1014860343300005327Corn RhizosphereMSRVEQTVFSLALLGASSPAFAGIQTPAPVAGIGIGAVVLVGIGYRALKGRIAK*
Ga0070658_1016178923300005327Corn RhizosphereMSRIEKLVYGLALLGSAAPAFAGRTAPAPVAGVGIGAVLLVGMGYRALKSRINR*
Ga0070658_1088003223300005327Corn RhizosphereMRRFENVVIGLAVLASASPASAGNTVPAPIAGVGIGAVALIGLGYRALKRRINP*
Ga0070658_1120373323300005327Corn RhizosphereMTRIEQIVLGVALLGASSPAFAGNPTPAPIAGVGIGAVLLVGLGYRALKGRITK*
Ga0070676_1012888023300005328Miscanthus RhizosphereMRRFENVVIGLAVLASASPAFAGNTVPAPIAGVGIGAVALIGLGYRALKRRINP*
Ga0070683_10181389133300005329Corn RhizosphereMKRIEAIVFGLTALGISTPAFAGTQVPAPIAGVGIGARVLVGIGYRALKARIK*
Ga0070683_10191141133300005329Corn RhizosphereNLVIGVAVFASASPAFAGQTVPAPIAGVGIGAVLLIGVGYRALKGRVGR*
Ga0070670_10001331283300005331Switchgrass RhizosphereMRRFENIVIGLAVLASASPAFAGNTVPAPIAGVGIGAVALIGLGYRALKRRINP*
Ga0068868_10028707333300005338Miscanthus RhizosphereLALLGAASPAFAGIQTPAPVAGIGIGAVVLVGIGYRALKGRIAK*
Ga0070660_10003370423300005339Corn RhizosphereMKRIEAVVFGLAVLGISSPSFAGTAQVPAPIAGVGIGAVVLIGLGYRALKGRISR*
Ga0070660_10017571123300005339Corn RhizosphereMSLKENIVLGLVLVSTAAPAFAGREPVPAPIAGVGVGALLLLGAGYRALKSRIRP*
Ga0070660_10124028613300005339Corn RhizosphereMMSRVEQTVFSLALLGASSPAFAGIQTPAPVAGIGIGAVVLVGIGYRALKGRIAK*
Ga0070689_10023143813300005340Switchgrass RhizosphereRLKKNRGKFMSRIEKIAFGLALLGAASPAFATAVAPAPIAGVGIGAVVLLGMGYRALKSRINP*
Ga0070661_10006271143300005344Corn RhizosphereMKRIEAVVFGLAVLGISSPAFAGTAQVPAPIAGVGIGAVVLIGLGYRALKGR
Ga0070661_10026882913300005344Corn RhizosphereMSRVEQTVLGLALLGASSPAFAGIQTPAPVAGIGIGAVVLVGIGYRALKGRIAK*
Ga0070669_10126784923300005353Switchgrass RhizosphereIEKIAFGLALLGAASPAFATAVAPAPIAGVGIGAVVLLGMGYRALKSRINP*
Ga0070673_10118861623300005364Switchgrass RhizosphereLALLGASSPAFAGIQTPAPVAGIGIGAVVLVGIGYRALKGRMAK*
Ga0070688_10097772823300005365Switchgrass RhizosphereFGLALLGAASPAFATAVAPAPIAGVGIGAVVLLGMGYRALKSRINP*
Ga0070709_1036102923300005434Corn, Switchgrass And Miscanthus RhizosphereMRRLENLAFGLTLLACASPAFAGQPVPAPIAGIGIGAVVLVGIGYRALKSRINR*
Ga0070714_10006751543300005435Agricultural SoilMRRLENLAFSLALLACASPAFAGQPVPAPIAGIGIGAVVLVGIGYRALKSRINR*
Ga0066687_1013701253300005454SoilMGRVEAVVFGLALATAASPAFAGLLQTPAPVAGIGIGAVVLVGIGYRAVKARIK*
Ga0066687_1013701263300005454SoilMEGNMRRLETVVIGLALLASASPAFAGAPVPAPVAGIGIGAVVLVGIGYRALKARMK*
Ga0070662_10012413533300005457Corn RhizosphereMRRIENLVIGVAVFASASPAFAGQTVPAPIAGVGIGAVLLIGVGYRALKGRVGR*
Ga0070662_10024732333300005457Corn RhizosphereMSRIEKIAFGLALLGAASPAFATAVAPAPIAGVGIGAVVLLGMGYRALKSRINP*
Ga0070741_1019703633300005529Surface SoilMSSFEKVAICIALASASSPAFAGITGTPAPVAGVGIGAVVLVGIGYRALKRRFHS*
Ga0070679_10061740423300005530Corn RhizosphereMRRIENLVIGVAVFASASPAFAGQTVPAPIAGVGIGAVLLIGVGYRALKGRVDR*
Ga0070686_10171458623300005544Switchgrass RhizospherePMNRIEKIGLGLIMLTAASPAFAGDVVQTPAPIAGVGIGAIVLAGIGYRALKRRINP*
Ga0070693_10140031313300005547Corn, Switchgrass And Miscanthus RhizosphereMYGERIMKRIEAVVFGLAVLGISSPAFAGTAQVPAPIAGVGIGAVVLIGLGYRALKGRISR*
Ga0068855_10136598713300005563Corn RhizosphereRRIENLVIGVAVFASASPAFAGQTVPAPIAGVGIGAVLLIGVGYRALKGRVDR*
Ga0066703_1010343233300005568SoilMSRVEKITLGLVLLCAASPAFAGDGQPVPAPIAGVGIGAVMLVGMGYRALKRRINP*
Ga0066703_1010343243300005568SoilMNYLEKIVFGAAMLCVASPAFAGLEQPVPAPIAGVGIGAVVLVGMGYRALKRRINP*
Ga0066702_1001651123300005575SoilMNRLEKIIFGAAMLCVASPAMAAEVVPAPIAGVGIGAVLLVGAGYRALKRRINP*
Ga0066702_1053960413300005575SoilMTRRLEQLVFGAALLVMASPAFAGRPVPAPIAGIGIGAVVLIGMGYRALKARVK*
Ga0066708_1043813923300005576SoilMRRVETVVFGLALASAASPAFAGFTPTPAPIAGIGIGAIVLVGIGYRALKRRINP*
Ga0066708_1043813933300005576SoilLETVVIGLALLASASPAFAGAPIPAPVAGIGIGAVVLVGIGYRALKARIK*
Ga0068857_10145830523300005577Corn RhizosphereILLARLMYGERIMKRIEAVVFGLAVLGISSPSFAGTAQVPAPIAGVGIGAVVLIGLGYRALKGRISR*
Ga0068852_10272875313300005616Corn RhizosphereEQTVLGLALLGASSPAFAGIQTPAPVAGIGIGAVVLVGIGYRALKGRIAK*
Ga0068852_10284209423300005616Corn RhizosphereMNRIELGVFGIALAAVASPAFAGNPVPAPIAGIGVGAVLLVGFGYRALKARIKP*
Ga0068866_1001105523300005718Miscanthus RhizosphereMKRIEAIVFGLTALGISTPAFAGTQVPAPIAGVGIGAVVLVGIGYRALKARIK*
Ga0068866_1019764833300005718Miscanthus RhizosphereLIMLTAASPAFAGDVVQTPAPIAGVGIGAIVLAGIGYRALKRRINP*
Ga0068851_1001977413300005834Corn RhizosphereLGVAALASASPAFAGQPVPAPIAGVGIGAVVLVGIGYRALKRRINP*
Ga0068863_10191744113300005841Switchgrass RhizosphereNMRRFENVVIGLAVLASASPAFAGNTVPAPIAGVGIGAVALIGLGYRALKRRINP*
Ga0068860_10012211353300005843Switchgrass RhizosphereERLALGLAMLGTAAPAFAGRTVPAPIAGVGVGAVLLMGLGYRALKSRINR*
Ga0070717_1024142923300006028Corn, Switchgrass And Miscanthus RhizosphereMRRLENLAFGLALLACASPAFAGQPVPAPIAGIGIGAVVLVGIGYRALKSRINR*
Ga0066652_10022000633300006046SoilMTRLETTVLGLVMLGMASPAFAGGAPVPAPIAGVGIGAVILAGVGYRALKRRINP*
Ga0070715_1074849723300006163Corn, Switchgrass And Miscanthus RhizosphereMNRIELTILGVAALASASPAFAGQPVPAPIAGVGIGAVVLVGIGYRALKRRINP*
Ga0068871_10225126823300006358Miscanthus RhizosphereRIEKIGLGLIMLTAASPAFAGDVVQTPAPIAGVGIGAIVLAGIGYRALKRRINP*
Ga0079219_1249278923300006954Agricultural SoilMSRTEKLILTVALLGSASRALAGIVRTPAPIAGVGIGAVLLVGMGYR
Ga0105247_1003251753300009101Switchgrass RhizosphereMKRIEAIVFGLTALGISTPAFAGTQVPAPIAGVGIGAVVLVGIGYRALNARIK*
Ga0105241_1042549833300009174Corn RhizosphereMEGNMRRFENVVIGLAVLASASPAFAGNTVPAPIAGVGIGAVALIGLGYRALKRRINP*
Ga0105248_1069738413300009177Switchgrass RhizosphereRFENIAFGFLMLATAAPAFAGRAVPAPIAGVGIGAFVLIGLGYRTLKSRIGR*
Ga0105238_1082424513300009551Corn RhizosphereMRSIENLVIGVAVFASASPAFAGQTVPAPIAGVGIGAVLLIGVGYRALKGRVGR
Ga0126319_139232713300010147SoilKFLRSGDMSRIEKIAFGLVMLAPAAPAFAGTNVPAPIAGVGIGAVFLIGLGYRTLKGRIGR*
Ga0105239_1164546523300010375Corn RhizosphereMEGNMRRFENVVIGLAVLASASPAFAGNTVPAPIAGVGIGAILLIGVGYRALKSRINP*
Ga0150985_11447076213300012212Avena Fatua RhizosphereLVGRRRIVSRLEKIALGLVLLTAASPAFAGTPVPAPIAGVGIGAVVLVGMGYRALKRRINP*
Ga0150985_11447076253300012212Avena Fatua RhizosphereMTRLEKIVVGLAMVGMASPAFAAYDPVPAPIAGVGIGAVLLAGAGYRALKRRITR*
Ga0150984_10104112133300012469Avena Fatua RhizosphereMTQRFEQLLFGAALLAMASPAFAGRPVPAPIAGIGIGAVVLIGMGYRALKSRVR*
Ga0150984_10294973313300012469Avena Fatua RhizosphereMETNMNRIEKFTLGLALLTSASPAFAGLAPTPAPVAGIGIGAVVLVGIGYRALKRRINP*
Ga0150984_10945250513300012469Avena Fatua RhizosphereRKSVERENQMTQRVEQLLFGAALLAMASPAFAGRPVPAPVAGIGIGAVVLIGMGYRALKARIK*
Ga0150984_11102463223300012469Avena Fatua RhizosphereMNRIEKVSLGVMMAGLSSPAFASAPAVPAPIAGVGIGAVVLVGLGYRALKSRFNR*
Ga0150984_11399617223300012469Avena Fatua RhizosphereFGAALLAMASPAFAGRPVPAPVAGIGIGAVVLIGMGYRALKARIK*
Ga0150984_11449222723300012469Avena Fatua RhizosphereMRRLENLAFGLALVACASPAFAGQPVPAPIAGVGIGAVVLIGFGYRALKRRINP*
Ga0150984_12355223113300012469Avena Fatua RhizosphereARLVGRRRIVSRLEKIALGLVLLTAASPAFAGTPVPAPIAGVGIGAVVLVGMGYRALKRRINP*
Ga0164298_1016832433300012955SoilMSRVEKIVLALTILGAASPAFAGISSPVPAPVAGMGIGAVVLVGIGYRALKRRINS*
Ga0164298_1016832443300012955SoilMTRGEAIVIGVALLGAASPAFAGPVGVPAPIAGVGLGAIVLVGIGYRALKRRINS*
Ga0164298_1129057623300012955SoilMSRVEKIMIGLALVAAATPAFAGGAAPVPAPLAGVGIGAVLLVGIGYRALKRRTDR*
Ga0163162_1038846323300013306Switchgrass RhizosphereMEGNMRRFENIVIGLAVLASASPAFAGNTVPAPIAGVGIGAVALIGLGYRALKRRINP*
Ga0167658_101492113300015195Glacier Forefield SoilMSRVEKIVLGLVLLGASSPAFAGLEQPVPAPIAGVGIGAVVLVGMGYRALKRRINP*
Ga0132258_1323533623300015371Arabidopsis RhizosphereMSRIENIAFGLVMLAPAAPAFAGQTVPAPIAGVGIGAVFLIGVGYRALKSRIGR*
Ga0066667_1039976823300018433Grasslands SoilMNRTEKLVYGLFLLASAAPAFAGRSEMAPAPIAGVGIGAVALIGIGYRALKRRINP
Ga0066669_1031964033300018482Grasslands SoilMRRLETVVIGLALLASASPAFAGAPIPAPVAGIGIGAAVLVGIGYRALKARVK
Ga0190273_1012267633300018920SoilMARVEKIILGLVLVGAASPAFAGQTVPAPIAGVGIGAVVLIGIGYRALKARIR
Ga0207697_1000705433300025315Corn, Switchgrass And Miscanthus RhizosphereMRRFENIVIGLAVLASASPAFAGNTVPAPIAGVGIGAVALIGLGYRALKRRINP
Ga0207697_1005075733300025315Corn, Switchgrass And Miscanthus RhizosphereMKRIEAIVFGLTALGISTPAFAGTQVPAPIAGVGIGAVVLVGIGYRALKARI
Ga0207656_1004601523300025321Corn RhizosphereMKRIEAVVFGLAVLGISSPAFAGTAQVPAPIAGVGIGAVVLIGLGYRALKGRISR
Ga0207642_1000949433300025899Miscanthus RhizosphereMRRFENVVIGLAVLASASPAFAGNTVPAPIAGVGIGAVALIGLGYRALKRRINP
Ga0207710_1022121113300025900Switchgrass RhizosphereLLGVAALASASPAFAGQPVPAPIAGVGIGAVVLVGIGYRALKRRINP
Ga0207680_1000095933300025903Switchgrass RhizosphereMSRYERLALGLAMLGTAAPAFAGRTVPAPIAGVGVGAVLLMGLGYRALKSRINR
Ga0207680_1000095943300025903Switchgrass RhizosphereMSRIEKIAFGLALLGAASPAFATAVAPAPIAGVGIGAVVLLGMGYRALKSRINP
Ga0207705_1008163923300025909Corn RhizosphereMTRIEQIVLGVALLGASSPAFAGNPTPAPIAGVGIGAVLLVGLGYRALKGRITK
Ga0207705_1008163933300025909Corn RhizosphereMSRVEQTVFSLALLGASSPAFAGIQTPAPVAGIGIGAVVLVGIGYRALKGRIAK
Ga0207705_1065143623300025909Corn RhizosphereMSRIEKLVYGLALLGSAAPAFAGRTAPAPVAGVGIGAVLLVGMGYRALKSRINR
Ga0207660_1101538623300025917Corn RhizosphereMRRIENLVIGVAVFASASPAFAGQTVPAPIAGVGIGAVLLIGVGYRALKGRVGR
Ga0207657_1017775033300025919Corn RhizosphereMSLKENIVLGLVLVSTAAPAFAGREPVPAPIAGVGVGALLLLGAGYRALKSRIRP
Ga0207649_1073399713300025920Corn RhizosphereEKYLRRRMMSRVEQTVLGLALLGASSPAFAGIQTPAPVAGIGIGAVVLVGIGYRALKGRIAK
Ga0207652_1050798123300025921Corn RhizosphereMRRIENLVIGVAVFASASPAFAGQTVPAPIAGVGIGAVLLIGVGYRALKGRVDR
Ga0207681_1175058423300025923Switchgrass RhizosphereRIEKIAFGLALLGAASPAFATAVAPAPIAGVGIGAVVLLGMGYRALKSRINP
Ga0207694_1058715213300025924Corn RhizosphereMRSIENLVIGVAVFASASPAFAGQTVPAPIAGVGIGAVLLIGVGYRALKGRV
Ga0207650_1075699323300025925Switchgrass RhizosphereMEGNMRRFENIVIGLAVLASASPAFAGNTVPAPIAGVGIGAVALIGLGYRALKRRINP
Ga0207701_1032683633300025930Corn, Switchgrass And Miscanthus RhizosphereMNRIEKIGLGLIMLTAASPAFAGDVVQTPAPIAGVGIGAIVLAGIGYRALKRRINP
Ga0207690_1015572423300025932Corn RhizosphereMYGERIMKRIEAVVFGLAVLGISSPSFAGTAQVPAPIAGVGIGAVVLIGLGYRALKGRIS
Ga0207709_1090056523300025935Miscanthus RhizosphereKNRGKFMSRIEKIAFGLALLGAASPAFATAVAPAPIAGVGIGAVVLLGMGYRALKSRINP
Ga0207670_1173894223300025936Switchgrass RhizosphereMNRIELTFLGVAALASASPAFAGQPVPAPIAGVGIGAVVLVGIGYRALKRRINP
Ga0207711_1179102923300025941Switchgrass RhizosphereQVMNRIELTLLGVAALASASPAFAGQPVPAPIAGVGIGAVVLVGIGYRALKRRINP
Ga0207661_1150425423300025944Corn RhizosphereMKRIEAVVFGLAVLGISSPAFAGTAQVPAPIAGVGIGAVVLIGLGYRA
Ga0207667_1019146923300025949Corn RhizosphereMNRIEKIAFCAVLACASSPAFAGPAAAPAPIAGVGIGAVVLVGIGYRALKGRIGR
Ga0207651_1098296413300025960Switchgrass RhizosphereMSRVEQTVFSLALLGASSPAFAGIQTPAPVAGIGIGAVVLVGIGYRALKGRMAK
Ga0207639_1026228913300026041Corn RhizosphereRVGGNWLSGPESEDQVMNRIELTLLGVAALASASPAFAGQPVPAPIAGVGIGAVVLVGIGYRALKRRINP
Ga0207676_1122649123300026095Switchgrass RhizosphereMRRFENVVIGLAVLAFASSAFAGNTVPAPIAGVGIGAVALIGLGYRALKRRINP
Ga0207675_10048599133300026118Switchgrass RhizosphereGPESEDQVMNRIELTLLGVAALASASPAFAGQPVPAPIAGVGIGAVVLVGIGYRALKRRINP
Ga0207698_1040051813300026142Corn RhizosphereLFQGSLPMNRIEKIGLGLIMLTAASPAFAGDVVQTPAPIAGVGIGAIVLAGIGYRALKRRINP
Ga0207698_1186572723300026142Corn RhizosphereMNRIELGVFGIALAAVASPAFAGNPVPAPIAGIGVGAVLLVGFGYRALKARIKP
Ga0207698_1186572733300026142Corn RhizosphereMRRIEAVLFGVAIAGLSSPAFAGVNPVPAPIAGVGIGAVLLVGIGYRALKARIK
Ga0209469_105639923300026307SoilMTRLETTVLGLVMLGMASPAFAGGAPVPASIAGVGIGAVILAGVGYRALKRRINP
Ga0209153_115578923300026312SoilMSRVEKVILGLVMLSAASPAFAGLEQPVPAPIAGVGIGAVLLVGAGYRAVKRRINR
Ga0209059_101371733300026527SoilMSRVEKITLGLVLLCAASPAFAGDGQPVPAPIAGVGIGAVMLVGMGYRALKRRINP
Ga0209059_101371743300026527SoilMNYLEKIVFGAAMLCVASPAFAGLEQPVPAPIAGVGIGAVVLVGMGYRALKRRINP
Ga0209059_101371753300026527SoilMNRLEKIIFGAAMLCVASPAMAAEVVPAPIAGVGIGAVLLVGAGYRALKRRINP
Ga0268266_1007216413300028379Switchgrass RhizosphereVMNRIELTLLGVAALASASPAFAGQPVPAPIAGVGIGAVVLVGIGYRALKRRINP
Ga0307473_1141245423300031820Hardwood Forest SoilMNRIENVVLGLALAASASPAFAGNPVPAPIAGVGIGAVVLVGIGYRALKARIK
Ga0308175_10096883013300031938SoilMTQRVEQLLFGAALLAMASPAFAGRPVPAPVAGIGIGAVVLIGMGYRALKARIK
Ga0308174_1016568133300031939SoilMRRLENLAFGLALVACASPAFAGQPVPAPIAGVGVGAVVLVGIGYRALKSRINR
Ga0308176_1161030723300031996SoilMSRNEKIALGLALLGGASPAFAGIPQTPAPIAGIGIGAVLLVGIGYRALKSRINP
Ga0308173_1044100223300032074SoilRMNRIEKISLVLALVAAADPALAGIPQTPAPVAGVGIGAVVLIGIGYRALKRRINP
Ga0372943_0010515_4016_41863300034268SoilMNRLEKIVFGAAMLCVASPAFAGLEQPVPAPIAGVGIGAVVLVGMGYRALKRRINP

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Bioinformatics & Integrated Biology Lab
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Biomedical Sciences Research Center "Alexander Fleming"
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