Metagenome / Metatranscriptome Family F065098

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F065098
Family Type	Metagenome / Metatranscriptome
Number of Sequences	128
Average Sequence Length	95 residues
Representative Sequence	VGAELIRETEKSLDSLFSALDGKLADGAPARILGIYDDGKEWWIQVARGDDDINTIVLRLSRFASVFNAVAALRRWSCSGTSAPRIVRAMSLV
Number of Associated Samples	106
Number of Associated Scaffolds	128

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	56.25 %
% of genes near scaffold ends (potentially truncated)	35.16 %
% of genes from short scaffolds (< 2000 bps)	80.47 %
Associated GOLD sequencing projects	91
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.60

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (80.469 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere (17.188 % of family members)
Environment Ontology (ENVO)	Unclassified (28.906 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (49.219 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 18.18% β-sheet: 29.75% Coil/Unstructured: 52.07%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.60
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.60
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 128 Family Scaffolds
PF00990	GGDEF	36.72
PF00158	Sigma54_activat	21.09
PF13185	GAF_2	14.06
PF01590	GAF	3.91
PF07876	Dabb	1.56
PF07238	PilZ	1.56
PF13192	Thioredoxin_3	0.78
PF14532	Sigma54_activ_2	0.78
PF02823	ATP-synt_DE_N	0.78
PF12728	HTH_17	0.78
PF00160	Pro_isomerase	0.78

COG ID	Name	Functional Category	% Frequency in 128 Family Scaffolds
COG0355	FoF1-type ATP synthase, epsilon subunit	Energy production and conversion [C]	0.78
COG0652	Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family	Posttranslational modification, protein turnover, chaperones [O]	0.78

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	80.47 %
Unclassified	root	N/A	19.53 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	80.47 %
Unclassified	root	N/A	19.53 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	80.47 %
Unclassified	root	N/A	19.53 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	50.78 %
Unclassified	root	N/A	19.53 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	7.81 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	0.78 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.78 %
unclassified Bacteria	no rank	All Organisms → cellular organisms → Bacteria → unclassified Bacteria	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	19.53 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	12.50 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	3.91 %
bacterium HR11	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium HR11	0.78 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.78 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	19.53 %
Acidobacteria bacterium RIFCSPLOWO2_02_FULL_65_29	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_02_FULL_65_29	10.94 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	3.91 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.56 %
Thermoleophilia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	0.78 %
Verrucomicrobiae	class	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae	0.78 %
bacterium HR11	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium HR11	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	19.53 %
Acidobacteria bacterium RIFCSPLOWO2_02_FULL_65_29	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_02_FULL_65_29	10.94 %
Myxococcales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	1.56 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.56 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	0.78 %
Verrucomicrobiae	class	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae	0.78 %
bacterium HR11	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium HR11	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	19.53 %
Acidobacteria bacterium RIFCSPLOWO2_02_FULL_65_29	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_02_FULL_65_29	10.94 %
Sorangiineae	suborder	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae	1.56 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.56 %
Solirubrobacteraceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae	0.78 %
Verrucomicrobiae	class	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae	0.78 %
bacterium HR11	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium HR11	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	19.53 %
Acidobacteria bacterium RIFCSPLOWO2_02_FULL_65_29	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_02_FULL_65_29	10.94 %
Polyangiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae → Polyangiaceae	1.56 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.56 %
Solirubrobacter	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter	0.78 %
Verrucomicrobiae	class	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae	0.78 %
bacterium HR11	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium HR11	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	19.53 %
Acidobacteria bacterium RIFCSPLOWO2_02_FULL_65_29	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_02_FULL_65_29	10.94 %
unclassified Polyangiaceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae → Polyangiaceae → unclassified Polyangiaceae	1.56 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.56 %
unclassified Solirubrobacter	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → unclassified Solirubrobacter	0.78 %
Verrucomicrobiae	class	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae	0.78 %
bacterium HR11	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium HR11	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	19.53 %
Acidobacteria bacterium RIFCSPLOWO2_02_FULL_65_29	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_02_FULL_65_29	10.94 %
Polyangiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae → Polyangiaceae → unclassified Polyangiaceae → Polyangiaceae bacterium	1.56 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.56 %
Solirubrobacter sp. URHD0082	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → unclassified Solirubrobacter → Solirubrobacter sp. URHD0082	0.78 %
Verrucomicrobiae	class	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae	0.78 %
bacterium HR11	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium HR11	0.78 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2228664021\|ICCgaii200_c0938537	All Organisms → cellular organisms → Bacteria → Acidobacteria	1451	Open in IMG/M
3300000363\|ICChiseqgaiiFebDRAFT_10696292	All Organisms → cellular organisms → Bacteria → Acidobacteria	716	Open in IMG/M
3300000559\|F14TC_101767827	All Organisms → cellular organisms → Bacteria → Proteobacteria	2593	Open in IMG/M
3300000891\|JGI10214J12806_11276302	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1964	Open in IMG/M
3300001977\|JGI24746J21847_1049581	Not Available	590	Open in IMG/M
3300003319\|soilL2_10214903	All Organisms → cellular organisms → Bacteria	2017	Open in IMG/M
3300003996\|Ga0055467_10094634	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_02_FULL_65_29	842	Open in IMG/M
3300004114\|Ga0062593_100127889	All Organisms → cellular organisms → Bacteria → Acidobacteria	1870	Open in IMG/M
3300004114\|Ga0062593_100779874	All Organisms → cellular organisms → Bacteria → Acidobacteria	947	Open in IMG/M
3300004463\|Ga0063356_100148499	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	2666	Open in IMG/M
3300004479\|Ga0062595_100893651	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium HR11	747	Open in IMG/M
3300004480\|Ga0062592_100294266	All Organisms → cellular organisms → Bacteria → Acidobacteria	1224	Open in IMG/M
3300004643\|Ga0062591_100508457	All Organisms → cellular organisms → Bacteria → Acidobacteria	1037	Open in IMG/M
3300005289\|Ga0065704_10108930	All Organisms → cellular organisms → Bacteria	2016	Open in IMG/M
3300005293\|Ga0065715_10198665	All Organisms → cellular organisms → Bacteria	1374	Open in IMG/M
3300005295\|Ga0065707_11062784	Not Available	524	Open in IMG/M
3300005331\|Ga0070670_100805342	All Organisms → cellular organisms → Bacteria → Acidobacteria	848	Open in IMG/M
3300005332\|Ga0066388_108075253	Not Available	526	Open in IMG/M
3300005333\|Ga0070677_10850684	Not Available	524	Open in IMG/M
3300005335\|Ga0070666_10260767	All Organisms → cellular organisms → Bacteria → Acidobacteria	1229	Open in IMG/M
3300005336\|Ga0070680_100786506	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae → Polyangiaceae → unclassified Polyangiaceae → Polyangiaceae bacterium	820	Open in IMG/M
3300005336\|Ga0070680_100979392	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	730	Open in IMG/M
3300005340\|Ga0070689_102198699	Not Available	506	Open in IMG/M
3300005344\|Ga0070661_100818380	All Organisms → cellular organisms → Bacteria → Acidobacteria	765	Open in IMG/M
3300005364\|Ga0070673_101790031	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_02_FULL_65_29	582	Open in IMG/M
3300005366\|Ga0070659_100510466	All Organisms → cellular organisms → Bacteria → Acidobacteria	1025	Open in IMG/M
3300005366\|Ga0070659_101931683	Not Available	529	Open in IMG/M
3300005438\|Ga0070701_11047161	Not Available	571	Open in IMG/M
3300005458\|Ga0070681_11738028	Not Available	550	Open in IMG/M
3300005549\|Ga0070704_100580682	All Organisms → cellular organisms → Bacteria	983	Open in IMG/M
3300005577\|Ga0068857_100828929	All Organisms → cellular organisms → Bacteria → Acidobacteria	884	Open in IMG/M
3300005713\|Ga0066905_100340073	All Organisms → cellular organisms → Bacteria → Acidobacteria	1195	Open in IMG/M
3300005840\|Ga0068870_10134635	All Organisms → cellular organisms → Bacteria → Acidobacteria	1439	Open in IMG/M
3300006169\|Ga0082029_1102969	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_02_FULL_65_29	537	Open in IMG/M
3300006844\|Ga0075428_101163801	All Organisms → cellular organisms → Bacteria → Acidobacteria	813	Open in IMG/M
3300006845\|Ga0075421_100070319	All Organisms → cellular organisms → Bacteria → Proteobacteria	4417	Open in IMG/M
3300006845\|Ga0075421_100110941	All Organisms → cellular organisms → Bacteria	3447	Open in IMG/M
3300006845\|Ga0075421_100208290	All Organisms → cellular organisms → Bacteria → Acidobacteria	2416	Open in IMG/M
3300006846\|Ga0075430_100524124	All Organisms → cellular organisms → Bacteria → Acidobacteria	978	Open in IMG/M
3300006847\|Ga0075431_101778284	Not Available	573	Open in IMG/M
3300006852\|Ga0075433_10163943	All Organisms → cellular organisms → Bacteria → Acidobacteria	1978	Open in IMG/M
3300006865\|Ga0073934_10000202	All Organisms → cellular organisms → Bacteria	178681	Open in IMG/M
3300006880\|Ga0075429_100437613	All Organisms → cellular organisms → Bacteria → Acidobacteria	1146	Open in IMG/M
3300006918\|Ga0079216_10739493	All Organisms → cellular organisms → Bacteria → Acidobacteria	709	Open in IMG/M
3300006954\|Ga0079219_10232282	All Organisms → cellular organisms → Bacteria → Proteobacteria	1078	Open in IMG/M
3300006969\|Ga0075419_10442663	All Organisms → cellular organisms → Bacteria → Acidobacteria	896	Open in IMG/M
3300007004\|Ga0079218_10011948	All Organisms → cellular organisms → Bacteria → Proteobacteria	4339	Open in IMG/M
3300007004\|Ga0079218_10076498	All Organisms → cellular organisms → Bacteria → Acidobacteria	2204	Open in IMG/M
3300009094\|Ga0111539_10001078	All Organisms → cellular organisms → Bacteria	36028	Open in IMG/M
3300009094\|Ga0111539_11968162	Not Available	678	Open in IMG/M
3300009100\|Ga0075418_10008296	All Organisms → cellular organisms → Bacteria	11651	Open in IMG/M
3300009100\|Ga0075418_11806305	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → unclassified Solirubrobacter → Solirubrobacter sp. URHD0082	665	Open in IMG/M
3300009100\|Ga0075418_12655211	All Organisms → cellular organisms → Bacteria → Acidobacteria	547	Open in IMG/M
3300009147\|Ga0114129_11635562	Not Available	787	Open in IMG/M
3300009156\|Ga0111538_11340081	All Organisms → cellular organisms → Bacteria	903	Open in IMG/M
3300009177\|Ga0105248_12245384	All Organisms → cellular organisms → Bacteria → Acidobacteria	621	Open in IMG/M
3300009553\|Ga0105249_10359081	All Organisms → cellular organisms → Bacteria → Acidobacteria	1478	Open in IMG/M
3300009609\|Ga0105347_1089930	All Organisms → cellular organisms → Bacteria → Proteobacteria	1147	Open in IMG/M
3300010036\|Ga0126305_10135863	All Organisms → cellular organisms → Bacteria → Acidobacteria	1517	Open in IMG/M
3300010047\|Ga0126382_11040242	Not Available	721	Open in IMG/M
3300010397\|Ga0134124_10324445	All Organisms → cellular organisms → Bacteria	1443	Open in IMG/M
3300011425\|Ga0137441_1103672	Not Available	690	Open in IMG/M
3300011439\|Ga0137432_1099777	All Organisms → cellular organisms → Bacteria	909	Open in IMG/M
3300011440\|Ga0137433_1320383	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_02_FULL_65_29	502	Open in IMG/M
3300011445\|Ga0137427_10079713	All Organisms → cellular organisms → Bacteria → Acidobacteria	1310	Open in IMG/M
3300012231\|Ga0137465_1237947	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_02_FULL_65_29	540	Open in IMG/M
3300012893\|Ga0157284_10064125	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae	876	Open in IMG/M
3300012905\|Ga0157296_10331843	Not Available	544	Open in IMG/M
3300012911\|Ga0157301_10204109	All Organisms → cellular organisms → Bacteria → Acidobacteria	667	Open in IMG/M
3300012915\|Ga0157302_10205638	All Organisms → cellular organisms → Bacteria → Acidobacteria	709	Open in IMG/M
3300013307\|Ga0157372_11557129	Not Available	761	Open in IMG/M
3300018469\|Ga0190270_10038820	All Organisms → cellular organisms → Bacteria	3195	Open in IMG/M
3300018476\|Ga0190274_10267190	All Organisms → cellular organisms → Bacteria	1565	Open in IMG/M
3300019356\|Ga0173481_10229177	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_02_FULL_65_29	823	Open in IMG/M
3300019361\|Ga0173482_10051154	All Organisms → cellular organisms → Bacteria	1343	Open in IMG/M
3300021082\|Ga0210380_10068901	All Organisms → cellular organisms → Bacteria → Acidobacteria	1543	Open in IMG/M
3300022899\|Ga0247795_1082733	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_02_FULL_65_29	562	Open in IMG/M
3300025310\|Ga0209172_10000088	All Organisms → cellular organisms → Bacteria	267615	Open in IMG/M
3300025559\|Ga0210087_1062249	Not Available	744	Open in IMG/M
3300025901\|Ga0207688_10115049	All Organisms → cellular organisms → Bacteria	1565	Open in IMG/M
3300025901\|Ga0207688_10128617	All Organisms → cellular organisms → Bacteria → Acidobacteria	1483	Open in IMG/M
3300025903\|Ga0207680_10082495	All Organisms → cellular organisms → Bacteria → Acidobacteria	2023	Open in IMG/M
3300025908\|Ga0207643_10130349	All Organisms → cellular organisms → Bacteria → Acidobacteria	1496	Open in IMG/M
3300025919\|Ga0207657_11200067	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_02_FULL_65_29	577	Open in IMG/M
3300025936\|Ga0207670_10557132	All Organisms → cellular organisms → Bacteria	937	Open in IMG/M
3300025941\|Ga0207711_11430850	All Organisms → cellular organisms → Bacteria → Acidobacteria	634	Open in IMG/M
3300025945\|Ga0207679_10468620	All Organisms → cellular organisms → Bacteria → Acidobacteria	1120	Open in IMG/M
3300025945\|Ga0207679_11214056	Not Available	692	Open in IMG/M
3300025960\|Ga0207651_11602402	Not Available	586	Open in IMG/M
3300026075\|Ga0207708_10254637	All Organisms → cellular organisms → Bacteria → Acidobacteria	1416	Open in IMG/M
3300026089\|Ga0207648_10106600	All Organisms → cellular organisms → Bacteria	2459	Open in IMG/M
3300026116\|Ga0207674_10743571	All Organisms → cellular organisms → Bacteria → Acidobacteria	947	Open in IMG/M
3300027513\|Ga0208685_1084598	Not Available	682	Open in IMG/M
3300027617\|Ga0210002_1048405	Not Available	730	Open in IMG/M
3300027775\|Ga0209177_10365544	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_02_FULL_65_29	569	Open in IMG/M
3300027880\|Ga0209481_10308093	All Organisms → cellular organisms → Bacteria → Acidobacteria	804	Open in IMG/M
3300027886\|Ga0209486_10006827	All Organisms → cellular organisms → Bacteria → Acidobacteria	5000	Open in IMG/M
3300027886\|Ga0209486_10009348	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	4358	Open in IMG/M
3300027907\|Ga0207428_10002341	All Organisms → cellular organisms → Bacteria	18941	Open in IMG/M
3300027907\|Ga0207428_10260488	All Organisms → cellular organisms → Bacteria → Acidobacteria	1292	Open in IMG/M
3300027909\|Ga0209382_10023289	All Organisms → cellular organisms → Bacteria	7500	Open in IMG/M
3300027909\|Ga0209382_10023618	All Organisms → cellular organisms → Bacteria	7443	Open in IMG/M
3300027909\|Ga0209382_10226674	All Organisms → cellular organisms → Bacteria	2131	Open in IMG/M
3300028380\|Ga0268265_10282929	All Organisms → cellular organisms → Bacteria → Acidobacteria	1485	Open in IMG/M
3300028381\|Ga0268264_12593282	Not Available	511	Open in IMG/M
3300031226\|Ga0307497_10635725	Not Available	544	Open in IMG/M
3300031538\|Ga0310888_10010371	All Organisms → cellular organisms → Bacteria	3538	Open in IMG/M
3300031538\|Ga0310888_10057941	All Organisms → cellular organisms → Bacteria	1840	Open in IMG/M
3300031547\|Ga0310887_10066915	All Organisms → cellular organisms → Bacteria → Acidobacteria	1675	Open in IMG/M
3300031547\|Ga0310887_10073463	All Organisms → cellular organisms → Bacteria → Acidobacteria	1615	Open in IMG/M
3300031562\|Ga0310886_10672880	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_02_FULL_65_29	642	Open in IMG/M
3300031854\|Ga0310904_10778349	Not Available	668	Open in IMG/M
3300031892\|Ga0310893_10017046	All Organisms → cellular organisms → Bacteria → Acidobacteria	2083	Open in IMG/M
3300031944\|Ga0310884_10005250	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	4507	Open in IMG/M
3300031944\|Ga0310884_10149728	All Organisms → cellular organisms → Bacteria → Acidobacteria	1203	Open in IMG/M
3300032000\|Ga0310903_10094187	All Organisms → cellular organisms → Bacteria → Acidobacteria	1261	Open in IMG/M
3300032003\|Ga0310897_10325817	All Organisms → cellular organisms → Bacteria → Acidobacteria	709	Open in IMG/M
3300032012\|Ga0310902_10600953	All Organisms → cellular organisms → Bacteria → Acidobacteria	730	Open in IMG/M
3300032012\|Ga0310902_11341394	Not Available	508	Open in IMG/M
3300032017\|Ga0310899_10190005	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae → Polyangiaceae → unclassified Polyangiaceae → Polyangiaceae bacterium	903	Open in IMG/M
3300032017\|Ga0310899_10191708	All Organisms → cellular organisms → Bacteria → Acidobacteria	899	Open in IMG/M
3300032017\|Ga0310899_10239831	Not Available	819	Open in IMG/M
3300032075\|Ga0310890_11417441	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_02_FULL_65_29	571	Open in IMG/M
3300032122\|Ga0310895_10722978	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_02_FULL_65_29	519	Open in IMG/M
3300032122\|Ga0310895_10749588	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_02_FULL_65_29	511	Open in IMG/M
3300032144\|Ga0315910_10226322	All Organisms → cellular organisms → Bacteria	1408	Open in IMG/M
3300034664\|Ga0314786_145751	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_02_FULL_65_29	550	Open in IMG/M
3300034669\|Ga0314794_024099	All Organisms → cellular organisms → Bacteria → Acidobacteria	1006	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	59.38%
Host-Associated	Host-Associated	40.62%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	50.00%
Plants	Host-Associated → Plants	40.62%
Aquatic	Environmental → Aquatic	9.38%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	50.00%
Rhizosphere	Host-Associated → Plants → Rhizosphere	29.69%
Rhizoplane	Host-Associated → Plants → Rhizoplane	10.94%
Sediment	Environmental → Aquatic → Sediment	5.47%
Marine	Environmental → Aquatic → Marine	1.56%
Thermal Springs	Environmental → Aquatic → Thermal Springs	1.56%
Freshwater	Environmental → Aquatic → Freshwater	0.78%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	41.41%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	20.31%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	9.38%
Soil	Host-Associated → Plants → Rhizosphere → Soil	9.38%
Loam	Environmental → Terrestrial → Soil → Loam	8.59%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	5.47%
Wetlands	Environmental → Aquatic → Marine → Wetlands	1.56%
Sediment	Environmental → Aquatic → Thermal Springs → Sediment	1.56%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.56%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.78%

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	20.31%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	16.41%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	11.72%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	10.94%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	9.38%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	9.38%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	6.25%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	5.47%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	2.34%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	1.56%
Unclassified	Environmental → Aquatic → Thermal Springs → Sediment → Unclassified	1.56%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	1.56%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.56%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.78%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.78%

Habitat	Taxonomy	Distribution
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	17.19%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	16.41%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	7.81%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	5.47%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	5.47%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	4.69%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	3.91%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	3.91%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	2.34%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.34%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	2.34%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	2.34%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	2.34%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	2.34%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	1.56%
Hot Spring Sediment	Environmental → Aquatic → Thermal Springs → Sediment → Unclassified → Hot Spring Sediment	1.56%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	1.56%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	1.56%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	1.56%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.56%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	1.56%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	0.78%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.78%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	0.78%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	0.78%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	0.78%
Termite Nest	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Termite Nest	0.78%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.78%
Sugarcane Root And Bulk Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Sugarcane Root And Bulk Soil	0.78%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.78%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Switchgrass Rhizosphere	0.78%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere	0.78%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.78%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.78%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2228664021	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000363	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000559	Amended soil microbial communities from Kansas Great Prairies, USA - control no BrdU total DNA F1.4 TC clc assemly	Environmental	Open in IMG/M
3300000891	Soil microbial communities from Great Prairies - Wisconsin, Continuous corn soil	Environmental	Open in IMG/M
3300001977	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5	Host-Associated	Open in IMG/M
3300003319	Sugarcane bulk soil Sample L2	Environmental	Open in IMG/M
3300003996	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_CattailB_D2	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300004480	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4	Environmental	Open in IMG/M
3300004643	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3	Environmental	Open in IMG/M
3300005289	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2	Host-Associated	Open in IMG/M
3300005293	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1	Host-Associated	Open in IMG/M
3300005295	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3	Environmental	Open in IMG/M
3300005331	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG	Host-Associated	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005333	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG	Host-Associated	Open in IMG/M
3300005335	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG	Host-Associated	Open in IMG/M
3300005336	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG	Environmental	Open in IMG/M
3300005340	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG	Environmental	Open in IMG/M
3300005344	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG	Host-Associated	Open in IMG/M
3300005364	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG	Host-Associated	Open in IMG/M
3300005366	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG	Host-Associated	Open in IMG/M
3300005438	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG	Environmental	Open in IMG/M
3300005458	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG	Environmental	Open in IMG/M
3300005549	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG	Environmental	Open in IMG/M
3300005577	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2	Host-Associated	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005840	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2	Host-Associated	Open in IMG/M
3300006169	Termite nest microbial communities from Madurai, India	Environmental	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006846	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4	Host-Associated	Open in IMG/M
3300006847	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5	Host-Associated	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006865	Hot spring sediment bacterial and archeal communities from British Columbia, Canada, to study Microbial Dark Matter (Phase II) - Larsen N4 metaG	Environmental	Open in IMG/M
3300006880	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3	Host-Associated	Open in IMG/M
3300006918	Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS100	Environmental	Open in IMG/M
3300006954	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control	Environmental	Open in IMG/M
3300006969	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3	Host-Associated	Open in IMG/M
3300007004	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost	Environmental	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300009609	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT890	Environmental	Open in IMG/M
3300010036	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot26	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300011425	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT244_2	Environmental	Open in IMG/M
3300011439	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT820_2	Environmental	Open in IMG/M
3300011440	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT840_2	Environmental	Open in IMG/M
3300011445	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT700_2	Environmental	Open in IMG/M
3300012231	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT828_2	Environmental	Open in IMG/M
3300012893	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S059-202B-1	Environmental	Open in IMG/M
3300012905	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S013-104B-2	Environmental	Open in IMG/M
3300012911	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S088-202R-2	Environmental	Open in IMG/M
3300012915	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S103-311B-2	Environmental	Open in IMG/M
3300013307	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG	Host-Associated	Open in IMG/M
3300018469	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 T	Environmental	Open in IMG/M
3300018476	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 T	Environmental	Open in IMG/M
3300019356	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S073-202C-2 (version 2)	Environmental	Open in IMG/M
3300019361	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S133-311R-2 (version 2)	Environmental	Open in IMG/M
3300021082	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_5_coex redo	Environmental	Open in IMG/M
3300022899	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S016-104C-6	Environmental	Open in IMG/M
3300025310	Hot spring sediment bacterial and archeal communities from British Columbia, Canada, to study Microbial Dark Matter (Phase II) - Larsen N4 metaG (SPAdes)	Environmental	Open in IMG/M
3300025559	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_CattailB_D2 (SPAdes)	Environmental	Open in IMG/M
3300025901	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes)	Host-Associated	Open in IMG/M
3300025903	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025908	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025919	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025936	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes)	Environmental	Open in IMG/M
3300025941	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025945	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025960	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026075	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026089	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026116	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027513	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT890 (SPAdes)	Environmental	Open in IMG/M
3300027617	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M2 S AM (SPAdes)	Host-Associated	Open in IMG/M
3300027775	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control (SPAdes)	Environmental	Open in IMG/M
3300027880	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3 (SPAdes)	Host-Associated	Open in IMG/M
3300027886	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost (SPAdes)	Environmental	Open in IMG/M
3300027907	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes)	Host-Associated	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300028380	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028381	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300031226	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 10_S	Environmental	Open in IMG/M
3300031538	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D1	Environmental	Open in IMG/M
3300031547	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D4	Environmental	Open in IMG/M
3300031562	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D3	Environmental	Open in IMG/M
3300031854	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D1	Environmental	Open in IMG/M
3300031892	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D2	Environmental	Open in IMG/M
3300031944	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D1	Environmental	Open in IMG/M
3300032000	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D3	Environmental	Open in IMG/M
3300032003	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D1	Environmental	Open in IMG/M
3300032012	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D3	Environmental	Open in IMG/M
3300032017	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D4	Environmental	Open in IMG/M
3300032075	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D3	Environmental	Open in IMG/M
3300032122	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D4	Environmental	Open in IMG/M
3300032144	Garden soil microbial communities collected in Santa Monica, California, United States - Edamame soil	Environmental	Open in IMG/M
3300034664	Metatranscriptome of lab incibated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20R3 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300034669	Metatranscriptome of lab incibated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8R3 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
ICCgaii200_09385371	2228664021	Soil	VGAELIPEIEKSLDSLFSALDGKLADGAPARILGIYDDGKEWWIQVARGDDDINTIVLRLSRFASIFNAVAALKRWSCSGTTAPRIVRAMSLV
ICChiseqgaiiFebDRAFT_106962922	3300000363	Soil	MGLEELDPMPTSADVTPETENSFDWLFSALDGMPADGAPARILGIHDDGREWWIQVARGDDVTNTIVLRVSRFARVIHAGAALSRWSSPEAAAPRIVRAMCLV*
F14TC_1017678272	3300000559	Soil	VGAELTRETEKSFDWLFSALDGKFADGAPARILGIHDDGSEWWIQVARGDDDINTIVLRLSRFASAFNAVAALKCWNWSGTSAPRIVRAMSLV*
JGI10214J12806_112763022	3300000891	Soil	MPTSADVTPETENSFDWLFSALDGKPADGAPARILGIHDDGREWWIQVARGDDVTNTIVLRVSRFANVIHAGAALSRWSSPEAAAPRIVRAMCLV*
JGI24746J21847_10495811	3300001977	Corn, Switchgrass And Miscanthus Rhizosphere	VGAELIRETEKSLDSLFSALDGKLADGAPARILGIYDDGKEWWIQVARGDDDINTIVLRLSRFASVFNAVAALKRWSCS
soilL2_102149032	3300003319	Sugarcane Root And Bulk Soil	VGAELTAETEKSFDWLFSALDGKLADGAPARILGIYDDGKEWWIQVARGDDDINTIVVRLSRFASVLNAVAALRRWNWSGASAPHIVRAMSLV*
Ga0055467_100946342	3300003996	Natural And Restored Wetlands	VGAEPHLETERSLDSLFSALDGKLADGLPARILGIYDDGKEWWIQVARGDDDINTIVVRLSRFASVFNAVAALRRWNWSGTNAPRIVRAMSLV*
Ga0062593_1001278892	3300004114	Soil	VGAELIPEIEKSLDSLFSALDGKLADGAPARILGIYDDGKEWWIQVARGDDDINTIVLRLSRFASIFNAVAALKRWSCSGTTAPRIVRAMSLV*
Ga0062593_1007798741	3300004114	Soil	VGAELTRETEKSFDWLFSALDGKFADGAPARILGIYDDGSEWWIQVARGDDDINTIVLRLSRFASVFNAVAALKRWNWSGTSAPRIVRAMSLV*
Ga0063356_1001484993	3300004463	Arabidopsis Thaliana Rhizosphere	VGAELTRETEKSFDWLFSALDGKFADGAPARILGIYDDGSEWWIQVARGDDDINTIVLRLSRFASIFNAVAALKRWNWSGTSAPRIVRAMSLV*
Ga0062595_1008936511	3300004479	Soil	VGAELIRETEKSLDSLFSALDGKLADGAPARILGIYDDGKEWWIQVARGDDDINTIVLRLSRFASVFNAVAALKRWSCSGTTAPRIVRAMSL
Ga0062592_1002942662	3300004480	Soil	VGAELIPEIEKSLDSLFSALDGKLADGAPARILGIYDDGKEWWIQVARGDDDINTIVLRLSRFASIFNAVAALKRWSCSGTTAPRIVRAMSLVQKSSCAGGSALRN*
Ga0062591_1005084571	3300004643	Soil	MVRLRRSEWPVGAELIRETEKSLDSLFSALDGKLADGAPARILGIYDDGKEWWIQVARGDDDINTIVLRLSRFASVFNAVAALKRWSCSGTTAPRIVRAMSLV*
Ga0065704_101089301	3300005289	Switchgrass Rhizosphere	VGAELTRETEKSFDWLFSALDGKFADGAPARILGIYDDGSEWWIQVARGDDDINTIVLRLSRFASVFNAVAALKRWNWSGTSAPRIVRAMSL
Ga0065715_101986652	3300005293	Miscanthus Rhizosphere	VGAELIRETEKSLDSLFSALDGKLADGAPARILGIYDDGKEWWIQVARGDDDINTIVLRLSRFASVFNAVAALKRWSCSGTTAPRIVRAMSLV*
Ga0065707_110627841	3300005295	Switchgrass Rhizosphere	VGAELIRETEKSLDSLFSALDGKLADGAPARILGIYDDGKEWWIQVARGDDDINTIVLRLSRFASVFNAVAALKRWSCSGTTAPRIVRAM
Ga0070670_1008053422	3300005331	Switchgrass Rhizosphere	VGAELTRETEISFDWLFSALDGKFADGAPARILGIYDDGSEWWIQVARGDDDINTIVLRLSRFASVFNAVAALKRWNWSGTSAPRIVRAMSLV*
Ga0066388_1080752531	3300005332	Tropical Forest Soil	MVLDEVDAMPLSPEATPETENSLDRLFSELDGRPTDGPPARILGIHDDGREWWIQVARGDDVTNTMVLRLSRCASVTHANAALMRWSASATSAPRIIRAMSLVERS*
Ga0070677_108506841	3300005333	Miscanthus Rhizosphere	VGAELIPETEKSLDWLFSALDGKLADGAPARILGIYDDGKEWWIQVARGDDDINTVVLRLSRFASVFNAVAALRRWSCSGTSAPRIVRAMSLV*
Ga0070666_102607671	3300005335	Switchgrass Rhizosphere	VGAELTRETEKSFDWLFSALDGKFADGAPARILGIYDDGSEWWIQVARGDDDINTIVLRLSRFASVFNAVAALKRWKWSGMSAPRIVRAMSLV*
Ga0070680_1007865062	3300005336	Corn Rhizosphere	MGSLETERRPVGVELIRETEKSLDSLFLALDGKLADGAPARILGIYDDGKEWWIQVARGDDDINTIVLRLSRFASVFNAVAALKRWSCSGTTAPRIVRAMSLV*
Ga0070680_1009793921	3300005336	Corn Rhizosphere	MGLEEVDVMPPGADVTPEIENSLDRLFTELDGKPTDGAPARILGIHDDGREWWIQVARGDDVTNTIVLRVSRFASVMHAGVALTRWNSSGTSA
Ga0070689_1021986991	3300005340	Switchgrass Rhizosphere	MGSLETERRPVGAELIRETEKSLDSLFLALDGKLADGAPARILGIYDDGKEWWIQVARGDDDINTIVLRLSRFASVFNAVAALRRWSCSGTSAPRIVRAMSLV*
Ga0070661_1008183802	3300005344	Corn Rhizosphere	ALDGKLADGAPARILGIYDDGKEWWIQVARGDDDINTIVLRLSRFASIFNAVAALKRWSCSGTTAPRIVRAMSLV*
Ga0070673_1017900312	3300005364	Switchgrass Rhizosphere	VGAELTPETEKSLDWLFSALDGKLADGAPARILGIYDDGKEWWIQVARGDDDINTVVLRLSRFASVFNAVAALRRWSCSGTSAPRIVRAMSLV*
Ga0070659_1005104661	3300005366	Corn Rhizosphere	VGAELIPEIEKSLDSLFSALDGKLADGAPARILGIYDDGKEWWIQVARGDDDINTIVLRLSRFASVFNAVAALKRWSCSGTTAPRIVRAMSLV*
Ga0070659_1019316831	3300005366	Corn Rhizosphere	MGSLETERRPVGVELIRETEKSLDSLFLALDGKLADGAPARILGIYDDGKEWWIQVARGDDDINTIVLRLSRFASVFNAVAALRRWSCSGTSAPRIVRAMSLV*
Ga0070701_110471612	3300005438	Corn, Switchgrass And Miscanthus Rhizosphere	VGAELTRETEKSFDWLFSALDGKFADGAPARILGIYDDGSEWWIQVARGDDDINTIVLRLSRFASVFNAVAALKRWNWSGTS
Ga0070681_117380282	3300005458	Corn Rhizosphere	MGSLETERRPVGAELIRETEKSLDSLFLALDGKLADGAPARILGIYDDGKEWWIQVARGDDDINTIVLRLSRFASVFNAVAALRRWSCSGTSAPRIVR
Ga0070704_1005806821	3300005549	Corn, Switchgrass And Miscanthus Rhizosphere	MVRLRRSEWPVGAELIRETEKSLDSLFSALDGKLADGAPARILGIYDDGKEWWIQVARGDDDINTIVLRLSRFASVFNAVAALKRW
Ga0068857_1008289292	3300005577	Corn Rhizosphere	VGAELTQETEKSFDWLFSALDGKFADGAPARILGIYDDGSEWWIQVARGDDDINTIVLRLSRFASVFNAVAALKRWNWSGTSAPRIVRAMSLV*
Ga0066905_1003400731	3300005713	Tropical Forest Soil	EKSLDSLFSALDGKSAGGAPARILGIYDDGNDWWIQVARGDDDVNTVVLRVSHFASIFQILAALTRWNVSETASPRIIRTMCLV*
Ga0068870_101346351	3300005840	Miscanthus Rhizosphere	VGAELIRETEKSLDSLFSALDGKLADGAPARILGIYDDGKEWWIQVARGDDDINTIVLRLSRFASVFNAVAALRRWSCSGTSAPRIVRAMSLV*
Ga0082029_11029691	3300006169	Termite Nest	VRADLIRETEKSLDSLFSALDGKSAAGAPARILGIHDDGSDWWIQVARGEDDVNTIVLRVSHFASIFQILAALTRWNVSETASPRIIRTMCLV*
Ga0075428_1011638012	3300006844	Populus Rhizosphere	LPVRAHLIPETEKSFDSLFSALDGKPAGGAPARILGIHDDGDDWWIQVARGDDDDNTIVLQVSHFASVFQILTALTRWHVAETAAPRIVRAMCLV*
Ga0075421_1000703192	3300006845	Populus Rhizosphere	LSADVTRETENSFDSLFSALDGALADGVPARILGIHDDGREWWIQVARGDDDVNTIVLRVSKLAKVIHAGAALMRWSSSTSSSPRIVQAMCLV*
Ga0075421_1001109415	3300006845	Populus Rhizosphere	VIEEAERLPVRADLIPETEKSFDSLFSALDGKPAGGAPARILGIHDDGDDWWIQVARGDDDDNTIVLQVSHFASVFQILTALTRWHVAETAAPRIVRAMCLV*
Ga0075421_1002082902	3300006845	Populus Rhizosphere	LPVRAHLIPETEKSFDSLFSALDGKPAGGAPARILGIYDDGDDWWIQVARGDDDVNSIVVQASHCASVFQILAALTRWNVAETAAPRILRAMCLV*
Ga0075430_1005241242	3300006846	Populus Rhizosphere	VRADLIPETEKSFDSLFSALDGKPAGGAPARILGIHDDGDDWWIQVARGDDDDNTIVLQVSHFASVFQILTALTRWHVAETAAPRIVRAMCLV*
Ga0075431_1017782841	3300006847	Populus Rhizosphere	VRAHLIPETEKSFDSLFSALDGKPAGGAPARILGIYDDGDDWWIQVARGDDDVNSIVVQASHCASVFQILAALTRWNVAETAAPRILRAMCLV*
Ga0075433_101639432	3300006852	Populus Rhizosphere	AELIRETEKSLDSLFSALDGKLADGAPARILGIYDDGKEWWIQVARGDDDINTIVLRLSRFASVFNAVAALKRWSCSGTTAPRIVRAMSLV*
Ga0073934_1000020247	3300006865	Hot Spring Sediment	MMRAELPQETEKSLDRLFSELDGTPADGQPVRILGIHDDGRDWWIQVARGDDDLNTIVLRLSHFAGRFQAIAALARWTAHGSSWPRIVRAMCAV*
Ga0075429_1004376132	3300006880	Populus Rhizosphere	VGAELIRETEKSLDSLFSALDGKLADGAPARILGIYDDGKEWWIQVARGDDDINTIVLRLSRFASVFNAVAALRRWSWSGTSAPRIVRAMSLV*
Ga0079216_107394932	3300006918	Agricultural Soil	VSAELTLETEKSFDWLFSALDGKLAGGAPARILGIHDDGREWWIQVARGDDDVNTIVLRLSRFANVLSAAAALRRWNWSGTSAPRIVRAMSLV*
Ga0079219_102322822	3300006954	Agricultural Soil	VGAELIPEIEKSLDSLFSALDGKLADGAPARILGIHDDGREWWIQVARGDDDINTIVLRLSRFASVFNAVAALRRWSCSGTSAPRIVRAMSLV*
Ga0075419_104426632	3300006969	Populus Rhizosphere	LSADVTLETENSFDSLFSALDGALADGVPARILGIHDDGREWWIQVARGDDDVNTIVLRVSKLAKVIHAGAALMRWSSSTSSSPRIVQAMCLV*
Ga0079218_100119481	3300007004	Agricultural Soil	VPVVAELSQENEKSFDWLFSALDGKPADGAPARILAIYDDGRDWWIQVARGDDDVNTIVLRLSRFASVFNAAAALKRWASSGTGAPRIVCAMYLV*
Ga0079218_100764981	3300007004	Agricultural Soil	VERRQVSAELTLETEKSFDWLFSALDGKLAGGAPARILGIYDDGREWWIQVARGDDDVNTIVLRLSRFANVLSAAAALRRWNWSGTSAPRIVRAMSLV*
Ga0111539_1000107828	3300009094	Populus Rhizosphere	VSQVGAELTQETEKSFDWLFSALDGMPADGAPARILGIHDDGREWWIQVARGEDDTNTIVLRISRFASVIHACAALKRWTFPTTSAPRIVRAMSLV*
Ga0111539_119681621	3300009094	Populus Rhizosphere	VGPELIPETEKSLDWLFSALDGKLADGAPARILGIYDDGKEWWIQIARGDDDINTVVLRLSRFASVFNAVAALRRWSCSGTSAPRIVRAMSLV*
Ga0075418_100082966	3300009100	Populus Rhizosphere	VGAELTRETEKSFDWLFSALDGKFADGAPARILGIYDDGSEWWIQVARGDDDINTIVLRLSRLASVFNAVAALKRWNWSGTSAPRIVRAMSLV*
Ga0075418_118063052	3300009100	Populus Rhizosphere	LFWHEIWDEEVESIGPVRADLISRTEKSFDSLFSALDGKSAGGAPARILGIYDDGSDWWIQVARGDDDVNTVVLQVSHFANIFQILTALTRWNVADTASPRIIRTMSLV*
Ga0075418_126552112	3300009100	Populus Rhizosphere	LFSALDGKLADGAPARILGIYDDGKEWWIQVARGDDDINTIVLRLSRFASVFNAVAALKRWSCSGTTAPRIVRAMSLV*
Ga0114129_116355622	3300009147	Populus Rhizosphere	VGAELIPETEKSLDSLFSALDGKLADGAPARILGIYDDGKEWWIQVARGDDDINTIVLRLSRFASVFNAVAALRRWSCSGTSAPRIVRAMSLV*
Ga0111538_113400812	3300009156	Populus Rhizosphere	MGSLETERRPVGVELIRETEKSLDSLFLALDGKLADGAPARILGIYDDGKEWWIQVARGDDDINTIVLRLSRFASVFNAVAALRRWSCSGTSAPRIVRAMSLI*
Ga0105248_122453841	3300009177	Switchgrass Rhizosphere	EKSFDWLFSALDGKFADGAPARILGIYDDGSEWWIQVARGDDDINTIVLRLSRFASVFNAVAALKRWKWSGMSAPRIVRAMSLV*
Ga0105249_103590812	3300009553	Switchgrass Rhizosphere	MVRLRRSEWPVGAELIRETEKSLDSLFLALDGKLADGAPARILGIYDDGKEWWIQVARGDDDINTIVLRLSRFASVFNAVAALRRWSCSGTSAPRIVRAMSLI*
Ga0105347_10899302	3300009609	Soil	VEAERQPVGAELTGETEKSFDWLFSALDGKFADGAPARILGIYDDGSEWWIQVARGDDDINTIVLRLSRFASIFNAVAALKRWNWSGTSAPRIVRAMSLV*
Ga0126305_101358631	3300010036	Serpentine Soil	MMSQSDGALPVAAEVTPKIEKSLDWLFSALDGKLADGAPTRILGIYDDGKEWWIQVARGDDDINTIVLRLSRFASVFNAVAALRRWSCSGTSSPRIVRAMSLV*
Ga0126382_110402422	3300010047	Tropical Forest Soil	VAAKQTQETEKSFDWLFSALDGKPADGLPARILGIYDDGREWWIQVARGEDDVNTIVLRISRFASVLHAGAALRRWAQSGTSAPRIVRAMSLV*
Ga0134124_103244451	3300010397	Terrestrial Soil	VGAELIRETEKSLDSLFSALDGKLADGAPARILGIYDDGKEWWIQVARGDDDINTIVLRLSRFASVFNAVAALKRWSCSGTTAPRI
Ga0137441_11036721	3300011425	Soil	VEAERQPVGAELTGETEKSFDWLFSALDGKFADGAPARILGIYDDGSEWWIQVARGDDDINTIVLRLSRFASIFNAVVALKRWNWSGTSAPRIVRAMSLV*
Ga0137432_10997772	3300011439	Soil	MPPSADVTREIENSLDRLFSALDGKPTDGGPARILGIHHDSREWWIQIGRGDDVTNTIVLRVSRFANAMHAGAALTRWNSSGTNLPRIVRAMCLVEPSRRERGKPLRPRRRCR
Ga0137433_13203831	3300011440	Soil	MPPSADVTREIENSLERLFSALDGKPTDGGPTRILGIHHDSREWWIQIGRGDDVTNTIVLRVSRFANAMHAGAALTRWNSSGTNLPRIVRAMCLVEP*
Ga0137427_100797131	3300011445	Soil	RLFSALDGKPTDGGPARILGIHHDSREWWIQIGRGDDVTNTIVLRLSRFANVIHAGAALTRWNSSGTNLPRIVRAMCLVEP*
Ga0137465_12379471	3300012231	Soil	TEKSFDWLFSALDGKFADGAPARILGIYDDGSEWWIQVARGDDDINTIVLRLSRFASIFNAVAALKRWNWSGTSAPRIVRAMSLV*
Ga0157284_100641252	3300012893	Soil	VGADLTRETEKSFDWLFSALDGKFADGAPARILGIYDDGSEWWIQVARGDDDINTIVLRLSRFASVFNAVAALKRWNWSGTSAPRIVRAMSLV*
Ga0157296_103318431	3300012905	Soil	MRASAFLARNMVRLRRSEWPVGAELIRETEKSLDSLFSALDGKLADGAPARILGIYDDGKEWWIQVARGDDDINTIVLRLSRFASIFNAVAALKRWSCSGTTAPRIVRAMSLV*
Ga0157301_102041091	3300012911	Soil	SDCQVGAELIPEIEKSLDSLFSALDGKLADGAPARILGIYDDGKEWWIQVARGDDDINTIVLRLSRFASIFNAVAALKRWSCSGTTAPRIVRAMSLV*
Ga0157302_102056382	3300012915	Soil	AELTRETEKSFDWLFSALDGKFADGAPVRMLGIYDDGSEWWIQVARGDDDINTIVLRLSRFASVFNAVAALKRWNWSGTSAPRIVRAMSLV*
Ga0157372_115571291	3300013307	Corn Rhizosphere	MGSLETERRPVGVELIRETEKSLDSLFLALDGKLADGAPARILGIYDDGKEWWIQVARGDDDINTIVLRLSRFASIFNAVAALKRWSCSGTTAPRIVRAMSLVQKSSCAGGSALRN*
Ga0190270_100388201	3300018469	Soil	MPPSADVTREIENSLDRLFSALDGKPTDGGPARILGIHHDSREWWIQIGRGDDVTNTIVLRVSRFANAMHAGAALTRWNSSGTNLPRIVRAMCLIEP
Ga0190274_102671902	3300018476	Soil	VGPELIPETEKSLDWLFSALDGKLADGAPARILGIYDDGKEWWIQIARGDDDINTVVLRLSRFASVFNAVAALRRWSCSGTSAPRIVRAMSLV
Ga0173481_102291771	3300019356	Soil	VGAELIRETEKSLDSLFSALDGKLADGAPARILGIYDDGKEWWIQVARGDDDINTIVLRLSRFASIFNAVAALKRWSCSGTTAPRIVRAMSLV
Ga0173482_100511542	3300019361	Soil	VGADLTRETEKSFDWLFSALDGKFADGAPARILGIYDDGSEWWIQVARGDDDINTIVLRLSRFASVFNAVAALKRWNWSGTSAPRIVRAMSLV
Ga0210380_100689011	3300021082	Groundwater Sediment	VEAERQPVGAELSGETEKSFDWLFSALDGKFADGAPARILGIYDDGSEWWIQVARGDDDINTIVLRLSRFASIFNAVAALKRWNWSGTSAPRIVRAMSLV
Ga0247795_10827331	3300022899	Soil	VGAELTRETEKSFDWLFSALDGKFADGAPARILGIYDDGSEWWIQVARGDDDINTIVLRLSRFASVFNAVAALKRWNWSGTSAPRIVRAMSLV
Ga0209172_1000008847	3300025310	Hot Spring Sediment	MMRAELPQETEKSLDRLFSELDGTPADGQPVRILGIHDDGRDWWIQVARGDDDLNTIVLRLSHFAGRFQAIAALARWTAHGSSWPRIVRAMCAV
Ga0210087_10622492	3300025559	Natural And Restored Wetlands	VGAEPHLETERSLDSLFSALDGKLADGLPARILGIYDDGKEWWIQVARGDDDINTIVVRLSRFASVFNAVAALRRWNWSGTNAPRIVRAMSLV
Ga0207688_101150492	3300025901	Corn, Switchgrass And Miscanthus Rhizosphere	VGAELIPEIEKSLDSLFSALDGKLADGAPARILGIYDDGKEWWIQVARGDDDINTIVLRLSRFASVFNAVAALKRWSCSGTTAPRIVRAMSLV
Ga0207688_101286172	3300025901	Corn, Switchgrass And Miscanthus Rhizosphere	NMGSLETERRPVGVELIRETEKSLDSLFLALDGKLADGAPARILGIYDDGKEWWIQVARGDDDINTVVLRLSRFASVFNALAALRRWSCSGTSAPRIVRAMSLV
Ga0207680_100824952	3300025903	Switchgrass Rhizosphere	VGAELTRETEKSFDWLFSALDGKFADGAPARILGIYDDGSEWWIQVARGDDDINTIVLRLSRFASVFNAVAALKRWKWSGMSAPRIVRAMSLV
Ga0207643_101303492	3300025908	Miscanthus Rhizosphere	VGAELIRETEKSLDSLFSALDGKLADGAPARILGIYDDGKEWWIQVARGDDDINTIVLRLSRFASVFNAVAALKRWSCSGTTAPRIVRAMSLV
Ga0207657_112000672	3300025919	Corn Rhizosphere	SLETERRPVGVELIRETEKSLDSLFLALDGKLADGAPARILGIYDDGKEWWIQVARGDDDINTIVLRLSRFASVFNAVAALRRWSCSGTSAPRIVRAMSLV
Ga0207670_105571322	3300025936	Switchgrass Rhizosphere	MGSLETERRPVGAELIRETEKSLDSLFLALDGKLADGAPARILGIYDDGKEWWIQVARGDDDINTIVLRLSRFASVFNAVAALRRWSCSGTSAPRIVRAMSLV
Ga0207711_114308502	3300025941	Switchgrass Rhizosphere	TEKSFDWLFSALDGKFADGAPARILGIYDDGSEWWIQVARGDDDINTIVLRLSRFASVFNAVAALKRWKWSGMSAPRIVRAMSLV
Ga0207679_104686202	3300025945	Corn Rhizosphere	WVHRRRSDCQVGAELIPEIEKSLDSLFSALDGKLADGAPARILGIYDDGKEWWIQVARGDDDINTIVLRLSRFASVFNAVAALKRWSCSGTTAPRIVRAMSLV
Ga0207679_112140562	3300025945	Corn Rhizosphere	VGAELTRETEKSFDWLFSALDGKFADGAPARILGIYDDGSEWWFQVARGDDDINTIVLRLSRFASVFNAVAALKRWNWSGTSAPRIVRAMSLV
Ga0207651_116024021	3300025960	Switchgrass Rhizosphere	MVRLRRSEWPVGAELIRETEKSLDSLFSALDGKLADGAPARILGIYDDGKEWWIQVARGDDDINTIVLRLSRFASVFNAVAALKRWSCSGTTAPRIVRAMSLV
Ga0207708_102546372	3300026075	Corn, Switchgrass And Miscanthus Rhizosphere	VGEPPGDVGKEIRPAIAVERQPVGAELTRETEKSFDWLFSALDGKFADGAPARILGIYDDGSEWWIQVARGDDDINTIVLRLSRFASVFNAVAALKRWKWSGMSAPRIVRAMSLV
Ga0207648_101066002	3300026089	Miscanthus Rhizosphere	VGAELTRETEKSFDWLFSALDGKFADGAPARILGIYDDGSEWWIQVARGDDDINTIVLRLSRFASIFNAVAALKRWNWSGTSAPRIVRAMSLV
Ga0207674_107435711	3300026116	Corn Rhizosphere	VGAELTQETEKSFDWLFSALDGKFADGAPARILGIYDDGSEWWIQVARGDDDINTIVLRLSRFASVFNAVAALKRWNWSGTSAPRIVRAMSLV
Ga0208685_10845982	3300027513	Soil	VGAELTGETEKSFDWLFSALDGKFADGAPARILGIYDDGSEWWIQVARGDDDINTIVLRLSRFASIFNAVAALKRWNWSGTSAPRIVR
Ga0210002_10484052	3300027617	Arabidopsis Thaliana Rhizosphere	VGAELTRETEKSFDWLFSALDGKFADGAPARILGIYDDGSEWWIQVARGDDDINTIVLRLSRFASIFNAVAALKRW
Ga0209177_103655441	3300027775	Agricultural Soil	RTSEPGCTYLLFWHETWVRVRRSDWPVAAELIPEIEKSLDSLFSALDGKLADGAPARILGIHDDGREWWIQVARGDDDINTIVLRLSRFASVFNAVAALRRWSCSGTSAPRIVRAMSLV
Ga0209481_103080931	3300027880	Populus Rhizosphere	FSALDGALADGVPARILGIHDDGREWWIQVARGDDDVNTIVLRVSKLAKVIHAGAALMRWSSSTSSSPRIVQAMCLV
Ga0209486_100068276	3300027886	Agricultural Soil	VSAELTLETEKSFDWLFSALDGKLAGGAPARILGIYDDGREWWIQVARGDDDVNTIVLRLSRFANVLSAAAALRRWNWSGTSAPRIVRAMSLV
Ga0209486_100093485	3300027886	Agricultural Soil	VPVVAELSQENEKSFDWLFSALDGKPADGAPARILGIYDDGRDWWIQVARGDDDVNTIVLRLSRFASVFNAAAALKRWASSGTGAPRIVCAMYLV
Ga0207428_1000234116	3300027907	Populus Rhizosphere	VGAELTQETEKSFDWLFSALDGMPADGAPARILGIHDDGREWWIQVARGEDDTNTIVLRISRFASVIHACAALKRWTFPTTSAPRIVRAMSLV
Ga0207428_102604882	3300027907	Populus Rhizosphere	VGAELIPETEKSLDSLFSALDGKLADGAPARILGIYDDGKEWWIQVARGDDDINTIVLRLSRFASVFNAVAALKRWSCSGTTAPRIVRAMSLV
Ga0209382_100232897	3300027909	Populus Rhizosphere	LSADVTRETENSFDSLFSALDGALADGVPARILGIHDDGREWWIQVARGDDDVNTIVLRVSKLAKVIHAGAALMRWSSSTSSSPRIVQAMCLV
Ga0209382_100236183	3300027909	Populus Rhizosphere	VRADLIPETEKSFDSLFSALDGKPAGGAPARILGIHDDGDDWWIQVARGDDDDNTIVLQVSHFASVFQILTALTRWHVAETAAPRIVRAMCLV
Ga0209382_102266742	3300027909	Populus Rhizosphere	VRAHLIPETEKSFDSLFSALDGKPAGGAPARILGIYDDGDDWWIQVARGDDDVNSIVVQASHCASVFQILAALTRWNVAETAAPRILRAMCLV
Ga0268265_102829292	3300028380	Switchgrass Rhizosphere	SEWPVGAELIRETEKSLDSLFSALDGRLADGAPARILGIYDDGKEWWIQVARGDDDINTIVLRLSRFASVFNAVAALKRWSCSGTTAPRIVRAMSLV
Ga0268264_125932821	3300028381	Switchgrass Rhizosphere	VGAELIRETEKSLDSLFSALDGKLADGAPARILGIYDDGKEWWIQVARGDDDINTIVLRLSRFASVFNAVAALKRWSCSGTTAP
Ga0307497_106357252	3300031226	Soil	VGAELTRETEKSFDWLFSALDGKFADGAPARILGIYDDGSEWWIQVARGDDDINTIVLRLSRFASVFNAVAALTRWNWSGTSAPRIVRAMSLV
Ga0310888_100103715	3300031538	Soil	VGAELTLETEKSFDWLFSALDGKFADGAPARILGIYDDGSEWWIQVARGDDDINTIVLRLSRFASVFNAVAALKRWNWSGTSAPRIVRAMSLV
Ga0310888_100579412	3300031538	Soil	MGLEELDLMPTSADVTPETENSFDWLFSALDGKPADGAPARILGIHDDGREWWIQVARGDDVTNTIVLRVSRFASVIHAGAALSRWSSPEAAAPRIVRAMCLV
Ga0310887_100669152	3300031547	Soil	VGVELIRETEKSLDSLFLALDGKLADGAPARILGIYDDGKEWWIQVARGDDDINTIVLRLSRFASVFNAVAALRRWSCSGTSAPRIVRAMSLV
Ga0310887_100734632	3300031547	Soil	VRAELTRETEKSFDWLFSALDGKFADGAPARILGIYDDGSEWWIQVARGDDDINTIVLRLSRFASVFNAVAALKRWNWSGTSAPRIVRAMSLV
Ga0310886_106728802	3300031562	Soil	MPTSADVTPETENSFDWLFSALDGMPADGAPARILGIHDDGREWWIQVARGDDVTNTIVLRVSRFANVIHAGAALSRWSSPEAAAPRIVRAMCLV
Ga0310904_107783491	3300031854	Soil	MPTSADVTPETENSFDWLFSALDGKPADGAPARILGIHDDGREWWIQVARGDDVTNTIVLRVSRFANVIHAGAALSRWSSPEAAAPRIVRAMCLV
Ga0310893_100170462	3300031892	Soil	RLPVGAELTRETEKSFDWLFSALDGKFADGAPARILGIYDDGSEWWIQVARGDDDINTIVLRLSRFASVFNAVAALKRWNWSGTSAPRIVRAMSLV
Ga0310884_100052501	3300031944	Soil	PVRAELTRETEKSFDWLFSALDGKFADGAPARILGIYDDGSEWWIQVARGDDDINTIVLRLSRFASVFNAVAALKRWNWSGTSAPRIVRAMSLV
Ga0310884_101497282	3300031944	Soil	PMPTSADVTPETENSFDWLFSALDGKPADGAPARILGIHDDGREWWIQVARGDDVTNTIVLRVSRFANVIHAGAALSRWSSPEAAAPRIVRAMCLV
Ga0310903_100941872	3300032000	Soil	MGSLETERRPVGVELIRETEKSLDSLFLALDGKLADGAPARILGIYDDGKEWWIQVARGDDDINTIVLRLSRFASVFNAVAALKRWSCSGTTAPRIVRAMSLV
Ga0310897_103258171	3300032003	Soil	LALDGKLADGAPARILGIYDDGKEWWIQVARGDDDINTIVLRLSRFASVFNAVAALKRWSCSGTTAPRIVRAMSLV
Ga0310902_106009531	3300032012	Soil	ETEKSFDWLFSALDGKFADGAPARILGIYDDGSEWWIQVARGDDDINTIVLRLSRFASVFNAVAALKRWNWSGTSAPRIVRAMSLV
Ga0310902_113413941	3300032012	Soil	LDFQFRLHISAFLARVMGPEEVDPMPSSADVTPETENSFDWLFSALDGKPADGAPARILGIHDDGREWWIQVARGDDVTNTIVLRVSRFASVIHAGAALSRWSSPEAAAPRIVRAMCLV
Ga0310899_101900052	3300032017	Soil	MGLEELDPMPTSADVTPETENSFDWLFSALDGKPADGAPARILGIHDDGREWWIQVARGDDVTNTIVLRVSRFASVIHAGAALSRWSSPEAAAPRIVRAMCLV
Ga0310899_101917082	3300032017	Soil	GAELIRETEKSLDSLFSALDGKLADGAPARILGIYDDGKEWWIQVARGDDDINTIVLRLSRFASVFNAVAALKRWSCSGTTAPRIVRAMSLV
Ga0310899_102398312	3300032017	Soil	VGVELIRETEKSLDSLFSALDGKLADGAPARILGIYDDGKEWWIQVARGDDDINTIVLRLSRFASVFNAVAALRRWSCSGTSAPRIVRAMSLV
Ga0310890_114174411	3300032075	Soil	TQENEKSFDCLFSALDGKPADGAPARILGIYDDGRDWWIQVARGDDDVNTIVLQLSRFASVFNAAAALKRWASSGTGAPRIVRAMSLVSSGVS
Ga0310895_107229782	3300032122	Soil	TSAFLARNMVRLRRSEWPVGAELIRETEKSLDSLFSALDGKLADGAPARILGIYDDGKEWWIQVARGDDDINTIVLRLSRFASVFNAVAALKRWSCSGTTAPRIVRAMSLV
Ga0310895_107495881	3300032122	Soil	TEKSFDWLFSALDGKFADGAPARILGIYDDGSEWWIQVARGDDDINTIVLRLSRFASVFNAVAALKRWNWSGTSAPRIVRAMSLV
Ga0315910_102263222	3300032144	Soil	VAADLTQENEKSLDSLFSALDGKPADGAPVRILGIYDDGREWWIQAARGDDDINTIVLRLSRFASAFHAGAALRRWAAPSTSAPTIIRAMSLL
Ga0314786_145751_283_549	3300034664	Soil	TRETEKSFDWLFSALDGKFADGAPARILGIYDDGSEWWIQVARGDDDINTIVLRLSRFASVFNAVAALKRWNWSGTSAPRIVRAMSLV
Ga0314794_024099_3_275	3300034669	Soil	ELTRETEKSFDWLFSALDGKFADGAPARILGIYDDGSEWWIQVARGDDDINTIVLRLSRFASVFNAVAALKRWNWSGTSAPRIVRAMSLV

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F065098

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences