NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F065073

Metagenome / Metatranscriptome Family F065073

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F065073
Family Type Metagenome / Metatranscriptome
Number of Sequences 128
Average Sequence Length 78 residues
Representative Sequence MRRFVIAALAVAVLAAGTLVIARTAPVGDEQAAKEAHRAFVANLGKRDQKAIGAVLDRRFTWTDAEGRTLTRRETLKEL
Number of Associated Samples 122
Number of Associated Scaffolds 128

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 98.18 %
% of genes near scaffold ends (potentially truncated) 84.38 %
% of genes from short scaffolds (< 2000 bps) 78.91 %
Associated GOLD sequencing projects 116
AlphaFold2 3D model prediction Yes
3D model pTM-score0.38

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Bacteria (72.656 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil
(26.562 % of family members)
Environment Ontology (ENVO) Unclassified
(33.594 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(40.625 % of family members)


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Multiple Sequence Alignments

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: Yes Secondary Structure distribution: α-helix: 52.34%    β-sheet: 5.61%    Coil/Unstructured: 42.06%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.38
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 128 Family Scaffolds
PF03401TctC 71.09
PF03928HbpS-like 6.25
PF02894GFO_IDH_MocA_C 1.56
PF12697Abhydrolase_6 0.78
PF07690MFS_1 0.78
PF10099RskA 0.78
PF01370Epimerase 0.78
PF01408GFO_IDH_MocA 0.78

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 128 Family Scaffolds
COG3181Tripartite-type tricarboxylate transporter, extracytoplasmic receptor component TctCEnergy production and conversion [C] 71.09
COG0673Predicted dehydrogenaseGeneral function prediction only [R] 1.56

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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms72.66 %
UnclassifiedrootN/A27.34 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300000890|JGI11643J12802_11932796All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_62_58627Open in IMG/M
3300000956|JGI10216J12902_111738307Not Available722Open in IMG/M
3300002075|JGI24738J21930_10100119All Organisms → cellular organisms → Bacteria618Open in IMG/M
3300002239|JGI24034J26672_10071497All Organisms → cellular organisms → Bacteria622Open in IMG/M
3300004157|Ga0062590_100953556Not Available810Open in IMG/M
3300005329|Ga0070683_100312010All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1496Open in IMG/M
3300005330|Ga0070690_100141669All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1632Open in IMG/M
3300005340|Ga0070689_100176645All Organisms → cellular organisms → Bacteria1732Open in IMG/M
3300005355|Ga0070671_101626738All Organisms → cellular organisms → Bacteria573Open in IMG/M
3300005577|Ga0068857_100722013All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria948Open in IMG/M
3300005615|Ga0070702_100915238Not Available688Open in IMG/M
3300006028|Ga0070717_12100315All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria508Open in IMG/M
3300006038|Ga0075365_11209282All Organisms → cellular organisms → Bacteria531Open in IMG/M
3300006172|Ga0075018_10406608All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria693Open in IMG/M
3300006572|Ga0074051_11609488All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1315Open in IMG/M
3300006845|Ga0075421_101550047All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium723Open in IMG/M
3300006852|Ga0075433_11946307All Organisms → cellular organisms → Bacteria504Open in IMG/M
3300006854|Ga0075425_100163472All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria2555Open in IMG/M
3300006881|Ga0068865_100993543All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium734Open in IMG/M
3300006953|Ga0074063_14210368All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria2008Open in IMG/M
3300009089|Ga0099828_11144480All Organisms → cellular organisms → Bacteria → Proteobacteria691Open in IMG/M
3300009089|Ga0099828_11557711All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium582Open in IMG/M
3300009094|Ga0111539_10212391All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria2254Open in IMG/M
3300009174|Ga0105241_11228043Not Available711Open in IMG/M
3300009176|Ga0105242_12799536All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria538Open in IMG/M
3300009551|Ga0105238_10887210All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria910Open in IMG/M
3300010045|Ga0126311_11688353All Organisms → cellular organisms → Bacteria535Open in IMG/M
3300010046|Ga0126384_10115028All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria2012Open in IMG/M
3300010047|Ga0126382_10145225All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1615Open in IMG/M
3300010159|Ga0099796_10069016All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales1271Open in IMG/M
3300010360|Ga0126372_11385067All Organisms → cellular organisms → Bacteria → Proteobacteria735Open in IMG/M
3300010373|Ga0134128_12087209All Organisms → cellular organisms → Bacteria624Open in IMG/M
3300010398|Ga0126383_10368150All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales1464Open in IMG/M
3300011269|Ga0137392_11596183All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium511Open in IMG/M
3300012212|Ga0150985_122769814All Organisms → cellular organisms → Bacteria599Open in IMG/M
3300012907|Ga0157283_10047711All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria967Open in IMG/M
3300012908|Ga0157286_10159225All Organisms → cellular organisms → Bacteria727Open in IMG/M
3300012909|Ga0157290_10114895All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria815Open in IMG/M
3300012925|Ga0137419_11086660Not Available666Open in IMG/M
3300012937|Ga0162653_100068647All Organisms → cellular organisms → Bacteria570Open in IMG/M
3300012944|Ga0137410_11513933All Organisms → cellular organisms → Bacteria → Proteobacteria586Open in IMG/M
3300012957|Ga0164303_10052980All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales1809Open in IMG/M
3300012957|Ga0164303_11469381All Organisms → cellular organisms → Bacteria513Open in IMG/M
3300012988|Ga0164306_11826322Not Available528Open in IMG/M
3300013306|Ga0163162_13451479All Organisms → cellular organisms → Bacteria503Open in IMG/M
3300013307|Ga0157372_12415484All Organisms → cellular organisms → Bacteria603Open in IMG/M
3300014325|Ga0163163_10274762All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales1736Open in IMG/M
3300015264|Ga0137403_11559701Not Available513Open in IMG/M
3300015371|Ga0132258_11102768All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales2006Open in IMG/M
3300015372|Ga0132256_103389546Not Available536Open in IMG/M
3300015374|Ga0132255_105797654All Organisms → cellular organisms → Bacteria → Proteobacteria523Open in IMG/M
3300016371|Ga0182034_11461022All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium598Open in IMG/M
3300018061|Ga0184619_10182169All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria964Open in IMG/M
3300018066|Ga0184617_1088147All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria851Open in IMG/M
3300018071|Ga0184618_10023170All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium2059Open in IMG/M
3300018429|Ga0190272_10395184All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales1125Open in IMG/M
3300018476|Ga0190274_11302482All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria813Open in IMG/M
3300019876|Ga0193703_1021475All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria992Open in IMG/M
3300019877|Ga0193722_1150913All Organisms → cellular organisms → Bacteria → Acidobacteria507Open in IMG/M
3300021344|Ga0193719_10340288All Organisms → cellular organisms → Bacteria625Open in IMG/M
3300021968|Ga0193698_1046193All Organisms → cellular organisms → Bacteria564Open in IMG/M
3300022534|Ga0224452_1050490All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales1235Open in IMG/M
3300022756|Ga0222622_10960209All Organisms → cellular organisms → Bacteria627Open in IMG/M
3300024347|Ga0179591_1159036All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales4152Open in IMG/M
3300025928|Ga0207700_11513810All Organisms → cellular organisms → Bacteria595Open in IMG/M
3300025944|Ga0207661_11038302Not Available755Open in IMG/M
3300025945|Ga0207679_11687773All Organisms → cellular organisms → Bacteria580Open in IMG/M
3300025981|Ga0207640_10740603All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria846Open in IMG/M
3300026041|Ga0207639_11595048All Organisms → cellular organisms → Bacteria612Open in IMG/M
3300026067|Ga0207678_10059989All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales3272Open in IMG/M
3300026078|Ga0207702_12384117Not Available516Open in IMG/M
3300026095|Ga0207676_11493867Not Available672Open in IMG/M
3300026116|Ga0207674_10863693All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria872Open in IMG/M
3300027181|Ga0208997_1011839All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales1172Open in IMG/M
3300027560|Ga0207981_1009547All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales1728Open in IMG/M
3300027616|Ga0209106_1023794All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales1340Open in IMG/M
3300027633|Ga0208988_1049461Not Available1073Open in IMG/M
3300027866|Ga0209813_10315209All Organisms → cellular organisms → Bacteria611Open in IMG/M
3300028381|Ga0268264_11458757Not Available695Open in IMG/M
3300028592|Ga0247822_11526698All Organisms → cellular organisms → Bacteria565Open in IMG/M
3300028714|Ga0307309_10220160All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium SCGC AG-212-J23506Open in IMG/M
3300028754|Ga0307297_10048555All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales1302Open in IMG/M
3300028755|Ga0307316_10140566All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria857Open in IMG/M
3300028768|Ga0307280_10239207All Organisms → cellular organisms → Bacteria650Open in IMG/M
3300028778|Ga0307288_10303617All Organisms → cellular organisms → Bacteria635Open in IMG/M
3300028784|Ga0307282_10107503All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales1299Open in IMG/M
3300028796|Ga0307287_10260365All Organisms → cellular organisms → Bacteria656Open in IMG/M
3300028810|Ga0307294_10230297All Organisms → cellular organisms → Bacteria650Open in IMG/M
3300028811|Ga0307292_10213245All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria795Open in IMG/M
3300028814|Ga0307302_10297448All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria793Open in IMG/M
3300028819|Ga0307296_10360889All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria793Open in IMG/M
3300028828|Ga0307312_10962071All Organisms → cellular organisms → Bacteria565Open in IMG/M
3300028872|Ga0307314_10020326All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales1512Open in IMG/M
3300028876|Ga0307286_10396175All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium517Open in IMG/M
3300028880|Ga0307300_10202719All Organisms → cellular organisms → Bacteria643Open in IMG/M
3300031184|Ga0307499_10090482All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria822Open in IMG/M
3300031199|Ga0307495_10003345All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales1880Open in IMG/M
3300031226|Ga0307497_10634252All Organisms → cellular organisms → Bacteria544Open in IMG/M
3300031751|Ga0318494_10801657Not Available552Open in IMG/M
3300031845|Ga0318511_10323758Not Available699Open in IMG/M
3300031879|Ga0306919_10524990All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria913Open in IMG/M
3300031880|Ga0318544_10205668All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria760Open in IMG/M
3300031981|Ga0318531_10249633All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria801Open in IMG/M
3300032044|Ga0318558_10491594Not Available612Open in IMG/M
3300032067|Ga0318524_10330555All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria790Open in IMG/M
3300033475|Ga0310811_10137559All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales3096Open in IMG/M
3300033550|Ga0247829_10316699All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales1269Open in IMG/M
3300033551|Ga0247830_10355215Not Available1133Open in IMG/M
3300034150|Ga0364933_150507All Organisms → cellular organisms → Bacteria602Open in IMG/M
3300034817|Ga0373948_0152174All Organisms → cellular organisms → Bacteria579Open in IMG/M


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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil26.56%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil7.03%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil6.25%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil4.69%
Corn RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere4.69%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil3.12%
Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil3.12%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere3.12%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere3.12%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere3.12%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment2.34%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil2.34%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil2.34%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment1.56%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil1.56%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil1.56%
Corn RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere1.56%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere1.56%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere1.56%
Avena Fatua RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere1.56%
Populus EndosphereHost-Associated → Plants → Roots → Bulk Soil → Unclassified → Populus Endosphere1.56%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere1.56%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere1.56%
WatershedsEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds0.78%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil0.78%
Serpentine SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil0.78%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil0.78%
SedimentEnvironmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment0.78%
SoilEnvironmental → Terrestrial → Agricultural Field → Unclassified → Unclassified → Soil0.78%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere0.78%
Corn, Switchgrass And Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere0.78%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere0.78%
Miscanthus RhizosphereHost-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere0.78%
Switchgrass RhizosphereHost-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere0.78%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere0.78%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere0.78%
Rhizosphere SoilHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere Soil0.78%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere0.78%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere0.78%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300000890Soil microbial communities from Great Prairies - Iowa, Continuous Corn soilEnvironmentalOpen in IMG/M
3300000956Soil microbial communities from Great Prairies - Kansas, Native Prairie soilEnvironmentalOpen in IMG/M
3300002075Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4Host-AssociatedOpen in IMG/M
3300002239Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S2Host-AssociatedOpen in IMG/M
3300004157Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2EnvironmentalOpen in IMG/M
3300005329Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaGEnvironmentalOpen in IMG/M
3300005330Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaGEnvironmentalOpen in IMG/M
3300005332Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300005340Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaGEnvironmentalOpen in IMG/M
3300005355Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaGHost-AssociatedOpen in IMG/M
3300005436Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaGEnvironmentalOpen in IMG/M
3300005577Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2Host-AssociatedOpen in IMG/M
3300005615Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaGEnvironmentalOpen in IMG/M
3300005618Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2Host-AssociatedOpen in IMG/M
3300005764Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)EnvironmentalOpen in IMG/M
3300006028Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaGEnvironmentalOpen in IMG/M
3300006038Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5Host-AssociatedOpen in IMG/M
3300006172Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2014EnvironmentalOpen in IMG/M
3300006237Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2)Host-AssociatedOpen in IMG/M
3300006572Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHPB (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300006845Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5Host-AssociatedOpen in IMG/M
3300006852Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2Host-AssociatedOpen in IMG/M
3300006854Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4Host-AssociatedOpen in IMG/M
3300006881Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2Host-AssociatedOpen in IMG/M
3300006953Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHMB (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300009089Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaGEnvironmentalOpen in IMG/M
3300009094Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)Host-AssociatedOpen in IMG/M
3300009174Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaGHost-AssociatedOpen in IMG/M
3300009176Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaGHost-AssociatedOpen in IMG/M
3300009551Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaGHost-AssociatedOpen in IMG/M
3300010045Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot61EnvironmentalOpen in IMG/M
3300010046Tropical forest soil microbial communities from Panama - MetaG Plot_36EnvironmentalOpen in IMG/M
3300010047Tropical forest soil microbial communities from Panama - MetaG Plot_30EnvironmentalOpen in IMG/M
3300010159Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3EnvironmentalOpen in IMG/M
3300010358Tropical forest soil microbial communities from Panama - MetaG Plot_3EnvironmentalOpen in IMG/M
3300010359Tropical forest soil microbial communities from Panama - MetaG Plot_15EnvironmentalOpen in IMG/M
3300010360Tropical forest soil microbial communities from Panama - MetaG Plot_6EnvironmentalOpen in IMG/M
3300010373Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4EnvironmentalOpen in IMG/M
3300010398Tropical forest soil microbial communities from Panama - MetaG Plot_35EnvironmentalOpen in IMG/M
3300011269Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaGEnvironmentalOpen in IMG/M
3300012212Combined assembly of Hopland grassland soilHost-AssociatedOpen in IMG/M
3300012907Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S044-104R-1EnvironmentalOpen in IMG/M
3300012908Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S089-202R-1EnvironmentalOpen in IMG/M
3300012909Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S149-409B-1EnvironmentalOpen in IMG/M
3300012925Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012937Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t5i015EnvironmentalOpen in IMG/M
3300012944Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012957Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MGEnvironmentalOpen in IMG/M
3300012971Tropical forest soil microbial communities from Panama - MetaG Plot_1EnvironmentalOpen in IMG/M
3300012988Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_242_MGEnvironmentalOpen in IMG/M
3300013306Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaGHost-AssociatedOpen in IMG/M
3300013307Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaGHost-AssociatedOpen in IMG/M
3300014325Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaGHost-AssociatedOpen in IMG/M
3300015264Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300015371Combined assembly of cpr5 and col0 rhizosphere and soilHost-AssociatedOpen in IMG/M
3300015372Soil combined assemblyHost-AssociatedOpen in IMG/M
3300015374Col-0 rhizosphere combined assemblyHost-AssociatedOpen in IMG/M
3300016371Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172EnvironmentalOpen in IMG/M
3300018061Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_b1EnvironmentalOpen in IMG/M
3300018066Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_5_b1EnvironmentalOpen in IMG/M
3300018071Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_b1EnvironmentalOpen in IMG/M
3300018429Populus adjacent soil microbial communities from riparian zone of Shoshone River, Wyoming, USA - 504 TEnvironmentalOpen in IMG/M
3300018476Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 TEnvironmentalOpen in IMG/M
3300019876Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3a2EnvironmentalOpen in IMG/M
3300019877Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2m1EnvironmentalOpen in IMG/M
3300021086Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_1_08_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300021344Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2a2EnvironmentalOpen in IMG/M
3300021560Tropical forest soil microbial communities from Panama - MetaG Plot_4EnvironmentalOpen in IMG/M
3300021968Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3c1EnvironmentalOpen in IMG/M
3300022534Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30_b1EnvironmentalOpen in IMG/M
3300022756Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1EnvironmentalOpen in IMG/M
3300024347Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_08_16fungal (PacBio error correction)EnvironmentalOpen in IMG/M
3300025928Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025944Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025945Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025981Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026041Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026067Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300026078Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026095Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026116Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300027181Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM2_M1 (SPAdes)EnvironmentalOpen in IMG/M
3300027546Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM3_M3 (SPAdes)EnvironmentalOpen in IMG/M
3300027560Soil and rhizosphere microbial communities from Laval, Canada - mgLPC (SPAdes)EnvironmentalOpen in IMG/M
3300027616Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM1_M3 (SPAdes)EnvironmentalOpen in IMG/M
3300027633Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA Ref_M1 (SPAdes)EnvironmentalOpen in IMG/M
3300027866Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 (SPAdes)Host-AssociatedOpen in IMG/M
3300028381Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300028592Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Cellulose_Day30EnvironmentalOpen in IMG/M
3300028714Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_196EnvironmentalOpen in IMG/M
3300028754Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_157EnvironmentalOpen in IMG/M
3300028755Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_356EnvironmentalOpen in IMG/M
3300028768Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_119EnvironmentalOpen in IMG/M
3300028778Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_142EnvironmentalOpen in IMG/M
3300028784Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_121EnvironmentalOpen in IMG/M
3300028796Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_141EnvironmentalOpen in IMG/M
3300028802Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 17_SEnvironmentalOpen in IMG/M
3300028810Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_151EnvironmentalOpen in IMG/M
3300028811Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_149EnvironmentalOpen in IMG/M
3300028814Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_183EnvironmentalOpen in IMG/M
3300028819Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_153EnvironmentalOpen in IMG/M
3300028828Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_202EnvironmentalOpen in IMG/M
3300028872Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_204EnvironmentalOpen in IMG/M
3300028876Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_140EnvironmentalOpen in IMG/M
3300028880Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_181EnvironmentalOpen in IMG/M
3300031184Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 13_SEnvironmentalOpen in IMG/M
3300031199Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 7_SEnvironmentalOpen in IMG/M
3300031226Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 10_SEnvironmentalOpen in IMG/M
3300031751Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f24EnvironmentalOpen in IMG/M
3300031845Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f18EnvironmentalOpen in IMG/M
3300031879Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)EnvironmentalOpen in IMG/M
3300031880Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f25EnvironmentalOpen in IMG/M
3300031890Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)EnvironmentalOpen in IMG/M
3300031981Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f25EnvironmentalOpen in IMG/M
3300032044Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f20EnvironmentalOpen in IMG/M
3300032067Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f22EnvironmentalOpen in IMG/M
3300032261Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)EnvironmentalOpen in IMG/M
3300033475Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YCEnvironmentalOpen in IMG/M
3300033550Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day4EnvironmentalOpen in IMG/M
3300033551Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day5EnvironmentalOpen in IMG/M
3300034150Sediment microbial communities from East River floodplain, Colorado, United States - 25_j17EnvironmentalOpen in IMG/M
3300034817Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_1Host-AssociatedOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
JGI11643J12802_1193279623300000890SoilVAVLAAGTLVIGRTAPVDDEQAASKAHAAFVASLRKGDQKAIGALLDRRFIWTDAEGRTFTRREALKA
JGI10216J12902_11173830723300000956SoilMRRFVIAAVAVAVLAAGTLVIGRTAPVDDEQAASKAHAAFVASLRKGDQKAIGALLDRRFIWTDAEGRTFTRREAL
JGI24738J21930_1010011923300002075Corn RhizosphereMRRFVIAALAVAVLAAGTLVIARTAPVSDEQAAKEAHRAFVANLGKRDQKAIGAVLDRRFTWTDAEGRTLTRRETLKELPALAAANATGGDVRTHF
JGI24034J26672_1007149723300002239Corn, Switchgrass And Miscanthus RhizosphereMRRFVIAALAVAVLAAGTLVIARTAPVSDEQAAKEAHRAFVANLGKRDQKAIGAVLDRRFTWTDAEGRTLTRRETLKELPALAAANATGGDVRTHFYG
Ga0062590_10095355623300004157SoilMRRFVIAAVAVAVLAAGTLVIGRTAPVDDEQAASKAHAAFVASLRKGDQKAIGALLDRRFIWTDAEGRTFTRREALKALSAPATASPDNDIHTRFYGRMLMV
Ga0070683_10031201013300005329Corn RhizosphereMRRFVIAALAVAVLAAGTLVIARTAPVSDEQAAKEAHRAFVANLGKRDQKAIGAVLDRRFTWTDAEG
Ga0070690_10014166933300005330Switchgrass RhizosphereMRRFVIAALAVAVLAAGTLVIARTAPVSDEQAAKEAHRAFVANLGKRDQKAIGAVLDRRFTW
Ga0066388_10098921113300005332Tropical Forest SoilMRRRLVIAAVALAGLAVGGLVIARTAPANDEQAAKEADRTFVANLGKGDQKAVGAVLDRRFAWTDVEGLTRNRRDTLKDFSALAAANQGDSDLQTN
Ga0070689_10017664533300005340Switchgrass RhizosphereMRRFVIAALAVAVLAAGTLVIARTAPVSDEQAAKEAHRAFVANLGKRDQKAIGAVLDRRFTWTDAEGRTLTRRETLKELPALA
Ga0070671_10162673813300005355Switchgrass RhizosphereMRRFVIAALAVAVLAAGTLVIARTAPVSDEQAAKEAHRVFVANLGKRDQKAIGAVLDRRFTWTDAEGR
Ga0070713_10092918913300005436Corn, Switchgrass And Miscanthus RhizosphereMRRIAIAAVAIAGLAAGTFLIGHTGAVDDEQAAKEANRAFVANLDKGDQKAIGAVLDRRFSWTDSDGLTRHRRDTLKDLATLAAANKGDSDVQTHFYGKVLTVR
Ga0068857_10072201323300005577Corn RhizosphereMRRFVIAAVAVAVLAAGTLVIGRTAPVDDEQAASKAHAAFVASLRKGDQKAIGALLDRRFIWTDAEGR
Ga0070702_10091523813300005615Corn, Switchgrass And Miscanthus RhizosphereMRRFVIAAVAVAVLAAGTLVIGRTAPVDDEQAASKAHAAFVASLRKGDQKAIGALLDRRF
Ga0068864_10203411913300005618Switchgrass RhizosphereMRRLAIAAVALAGLAAGTLLIGRTGAVDDEQAAKQADRAFVANLDKGDPKAIGGTLDRRFTWTNTDGLTRNRRDTLKDLAALA
Ga0066903_10022938013300005764Tropical Forest SoilMRRIVIAAVALASVAAGTLIIERSRAIDDQQVAKEAERTFLANLAKGDAKAISGALDRRFTWTDSDGLTRN
Ga0070717_1210031523300006028Corn, Switchgrass And Miscanthus RhizosphereMRRFVIAALAIAVLAAGTLVIARTAPVNDEQAAKDAHRAFLTNLGKGDQKAVGAALDRRFTWTDAEGKTLTRP
Ga0075365_1120928223300006038Populus EndosphereMRRFVIAALAVAVLAAGTLVIARTAPVSDEQAAKEAHRAFVANLGKRHQKAIGAVLDRRFTWTDAEGRTLTRRETLKE
Ga0075018_1040660813300006172WatershedsMRRFVIAALAIAVLAAGTLVIARTAPVNDEQAAKAAHRAFVTNLAKGDQKALGAVLDRRFTWTDA
Ga0097621_10220102413300006237Miscanthus RhizosphereMRRLAIAAVALAGLAAGTLLIGRTGAVDDEQAAKQADRAFVANLDKGDPKAIGGTLDRRFSWTNTDGLTRNRRDTLKDLAALASANKGGDS
Ga0074051_1160948823300006572SoilMRRFVIAALAIAVLAAGTLVIARTAPVNDEQAAKAAHRAFVTNLAKGDQKALGAVLDRRFTWTDAEG
Ga0075421_10155004723300006845Populus RhizosphereMRRFVIAALAVAVLAAGTLVIARTAPVSGEQAAKEAHRAFVANLGKRDPKAIGAVLDRRFTWTDADGRTLTRR
Ga0075433_1194630713300006852Populus RhizosphereMRRFVIAAVAVAVLAAGTLVIGRTAPVDDEQAASKAHAAFVASLRKGDQKAIGALLDRRFIWTDAEGRT
Ga0075425_10016347243300006854Populus RhizosphereMRRFVIAAVAVAVLAAGTLVIGRTAPVDDEQAASKAHAAFVASLRKGDQKAIGALLDRRFIWTDA
Ga0068865_10099354313300006881Miscanthus RhizosphereMRRFVIAALAVAVLAAGTLVIARTAPVSDEQAAKEAHRAFVANLGKRDQEAIGAVLDRRFTWTDAEGRTLTRRETLKEL
Ga0074063_1421036833300006953SoilMRRFVIAALAIVVLAAGTLVIARTAPVNDEQAAKAAHRAFVTNLAKGDQKALGAVLDRRFTWTDAEGRALTRRETLKELPALAAAN
Ga0099828_1114448013300009089Vadose Zone SoilMRRVVIAALALASLAAGTLLIGRTVAVDDEQAAKEADRTFTANLGKGDQKAIG
Ga0099828_1155771113300009089Vadose Zone SoilMRRFVIAALALAGLAAGGLVLGRAAPVDDEQTAKEADRAFVARLGKGDAKAIGGMLDRRFAWIDSEGRTHGRRETLKDLATLAAANAAD
Ga0111539_1021239143300009094Populus RhizosphereMRRFVIAAVAVAVLAAGTLVIGRTAPVDDEQAASKAHAAFVASLRKGDQKAIGALLDRRFIWTDAEGRTFTRREALQALSAPATANP
Ga0105241_1122804313300009174Corn RhizosphereMRRFVIAAVAVAVLAAGTLVIGRTAPVDDEQAASKAHAAFVASLRKGDQKAIGALLDRRFIWTDAEGRTFTRREALKA
Ga0105242_1279953623300009176Miscanthus RhizosphereMRRLVIAVLAVAALAAGTLVIARTAPVSDEQAAREAHRAFIANLGKRDQKAIGSVLDRRFTWTDAEGRTLTRRETLKELPALAAANAA
Ga0105238_1088721013300009551Corn RhizosphereMRRFVIAALAVAVLAAGTLVIARTAPVSDEQAAKEAHRAFVANLGKRDQKAIGAVLDRRFTWTDAEGRTLTRRETLKELP
Ga0126311_1168835313300010045Serpentine SoilMRRFVIAALAVAVLAAGTLVIARTAPVSDEQAAKEAHRAFIANLGKRDQKAIGAVLDRRFTWTDTEGRTLTRRGTLKELPAL
Ga0126384_1011502813300010046Tropical Forest SoilMKPGHKTMRRLLIAAAATAVLAAGTLVIGRTAPGDEEQAARDADRAFIANLRKGDQRAV
Ga0126382_1014522533300010047Tropical Forest SoilMRRLAIAAVAVAVLAAGTLVIGRTAPGDEERAARDADRAFTANLRKSDQSAVGALLGRRFTFIDREGKTRSRR
Ga0099796_1006901623300010159Vadose Zone SoilMRRFVIAALAITVLAAGTLVIARTAPVDDEQAAKEAHRAFVANLGKGDQKAIGALLDRRFTWTDAEGRALTRRETLKDLHALAAANP
Ga0126370_1083576023300010358Tropical Forest SoilMRRFAIAAVALAGLAAGTLVIISRTHAVDDEQAAKEADRAFVANLEKGDQKAIGGSLDRRFTWTNTDGLTRNRRETLKDFAALVIPNKGDSDVQTNFYGRVLTVRGAR
Ga0126376_1107175923300010359Tropical Forest SoilMRRFAIAAVALAGLAAGTLVIISRTHAVDDEQAAKEADRAFVANLEKGDQKAIGASLDRRFTWTNTDGLTRNRRDTLKDFAAVAAPNKGDSDVQTHFY
Ga0126372_1138506713300010360Tropical Forest SoilMRRRLVIAAVALAGLAVGGLVIARTAPANDEQAAKEADRTFVANLGKGDQKAVGAVLDRRFAWTDVEGLTRNRRDTLKDF
Ga0134128_1208720913300010373Terrestrial SoilMRRFVIAAVAVAVLAAGTLVIGRTAPVDDEQAASKAHAAFVASLRKGDQKAIGAVLDRRFIWTDAEGRT
Ga0126383_1036815033300010398Tropical Forest SoilMKPGHKTMRRLLIAAAATAVLAAGTLVIGRTAPGDEEQAARDADRAFIANLRKGDQRAVGALLGRRFTFVD
Ga0137392_1159618313300011269Vadose Zone SoilMRRFVIAAVALAGLAAGSLVLGRAAPVDDEKAAKEADRAFVANLGKGDPKAIGSMLDRRF
Ga0150985_11362724923300012212Avena Fatua RhizosphereVRRVVIAAVALASLAAGSLVIGRTGAVDDERAAKEADRAFTANLAKGDQKAISAMLDRRFAWTNPDGLTRNRRDALKDFTALAAANSGDSDVQTHFYGRLLTVRGVHDNARFVRVLAKR
Ga0150985_12276981423300012212Avena Fatua RhizosphereMRRFVIAALAVAVLAAGMRVIARTAPVSYERAAKEAHRAFVANLGKRDQKAIGAVLDRRFTWTDAEGRTLTRRETLKE
Ga0157283_1004771123300012907SoilMRRFVIAAVAIAVLAAGTLVIGRTAPVHDEQAASKAHAAFVASLRKGDQKAIGAVLDRRFIWTDAEGRTFTRREALNALSAPA
Ga0157286_1015922513300012908SoilMRRFVIAAVAIAVLAAGTLVIGRTAPVDDEQAASKAHAAFVASLRKGDQKAIGAVLDRRFIWTDAEGRTFTRREALKALSAPATANPDNDIHTRFYGRMLMVR
Ga0157290_1011489513300012909SoilMRRFVIAAVAVAVLAAGTLVIGRTAPVDDEQAASKAHAAFVASLRKGDQKAIG
Ga0137419_1108666023300012925Vadose Zone SoilMRRLVIAAVALVGLAAGGLVIARTAPADGEQAAKDADRAFMVDLGKGNQRAIGAMLDRRFTWTSTEGLTRSRREALNDFTALAAAN
Ga0162653_10006864723300012937SoilMRRFVIAALVIVVLAAGTLVIARTAPANDEQAAKAAHRAFVANLGKGDQKAIGALLDRRFTWTDAEGRVLTRRETLK
Ga0137410_1151393323300012944Vadose Zone SoilMRRFVIAVTAIAILAVATLVIGRTAPVDEEEAAKQADRAFTANLGKGDQ
Ga0164303_1005298013300012957SoilMRRFVIAALAVAVLAAGTLVIARTAPVGDEQAAKEAHRAFVANLGKRDQKAIGAVLDRRFTWTDAEGRTLTRRETLKEL
Ga0164303_1146938113300012957SoilMRRFVIAALAIAVLAAGTLVIARTAPVNDEQAAKEAHRAFVANLGKGDQKAIGALLDRRFTW
Ga0126369_1173286213300012971Tropical Forest SoilMRRFAIAAVALAGLAAGTLVIISRTHAVDDEQAAKEADRAFVANLEKGDQKAIGGSLDRRFTWTNTDGLTRNRRDTLKDFAALVTPNK
Ga0164306_1182632223300012988SoilMRRFVIAALAVAVLAAGTLVIARTAPVSDEQAAKEAHRAFVANLGKRDQEAIGAVLDRRFTWTDAEGRTLTRRETLKELPALAAANA
Ga0163162_1345147913300013306Switchgrass RhizosphereMRRLVIAVLAVAALAAGTLVIARTAPVSDEQAAREAHRAFIANLGKRDQKAIGSVLDRRFTWTDAEG
Ga0157372_1241548413300013307Corn RhizosphereMRRFVIAALAVAVLAAGTLVIARTAPVSDEQAAKEAHRAFVANLGKRDQKAIGAVLDRRFTWTDAEGRTLTRRETLKELPALAAANAADGDVQTHFYGRMFT
Ga0163163_1027476233300014325Switchgrass RhizosphereMRRFVIAALAVAVLAAGTLVIARTAPVSDEQAAKEAHRAFVANLGKRDQEAIGAVLDRRFTWTDAEGRTLTRRETLKE
Ga0137403_1155970113300015264Vadose Zone SoilMRRLVIAAVALVGLAAGGLVIARTAPADGEQAAKDADRAFMVDLGKGNQRAIGAMLDRRFTWTSTEGLTRS
Ga0132258_1110276833300015371Arabidopsis RhizosphereMRRFVIAAVAVAVLAAGTLVIGRTAPVDDEQAASKAHAALVVSLRKGDQKAIGALLDRRFIWTDAEGRTFTRREALQALSAP
Ga0132256_10338954623300015372Arabidopsis RhizosphereMRRFLIAAVAVAVLAAGTLVIGRTAPVDDEQAASKAHAAFVASLRKGDQKAIGVVLDRRFIWTDAEGRTFTRREALQALSAPATANPDTDIHTRFYGRMLMV
Ga0132255_10579765413300015374Arabidopsis RhizosphereMRRIAIAAVALAGLAAGTFLIGRTGAVDDEQAAKEANRAFVANLDKGDQKAIGAALDRRFSWTDSDGLTHNR
Ga0182034_1146102213300016371SoilMRRIVIAAVALGVIAAGSLVLSRAAPIDNEKAAKEADRAFVANLGKADQK
Ga0184619_1018216923300018061Groundwater SedimentMRRFVIAALAIAVLAAGTLVIARTAPVNDEEAAKEAHRAFVANLGKGDQKGVGAVLDRRFTWT
Ga0184617_108814713300018066Groundwater SedimentMRRFVIAALAIAVLAAGTLVIARTAPVNDEQAAKAAHRAFVANLGKGDQKGVGAVLDRRFTWTDAEGRALTRRETLKELPAL
Ga0184618_1002317013300018071Groundwater SedimentMRRFVIAALAIAVLAAGTLVIARTAPVNDEQAAKEAHRAFVANLGKGDQKAIGALLDRRFTWTDVEDGR
Ga0190272_1039518413300018429SoilMRRFVIAALAVAVLAAGTLVIARTAPVSDEQAATEAHRAFVANLGKRDQKAIGAVLDRRFTWTDAEGRTLT
Ga0190274_1130248223300018476SoilMRRFVIAALAVAVLAAGTLVIARTAPVSDEQAAKEAHRAFIANLGKRDQKAIGAVLDRRFTWTDAEGRTLTRRETLKELPALAAA
Ga0193703_102147523300019876SoilMRRFVIAALAIAVSAAGTLVIARTAPVNDEEAAKEAHRAFVANLGKGDQKAIGALLDRRFTWTDAEGRALTR
Ga0193722_115091323300019877SoilMRRFVIAALAIAVLAAGTLVIARTAPVNDEEAAKEAHRAFVANLGKGDQKAIGALLDRRFTWTDAEGRALTRRETLKDLPAL
Ga0179596_1033002023300021086Vadose Zone SoilMRRVVIAALALASLAAGTLVIERTVAVDDEQAAKEADRTFTANLGKGDQKAISAALDRRFAWTNTEGLTRNRRETLKDFAALATANKGDSDIQANFYGRL
Ga0193719_1034028813300021344SoilMRRFVIAALAVAVLAAGTRVIARTAPVSDEQAAKEAHRAFVANLGKRDQKAIGAVLDRRFTWTDAEGRTLTRRETLKELPALAAANAADGD
Ga0126371_1108153123300021560Tropical Forest SoilMRRFAIAAVALAGLAAGTLVIISRTHAVDDEQAAKEADRAFVANLEKGDQKAIGGSLDRRFTWTNTDGLTRNRRDTLKDFA
Ga0193698_104619313300021968SoilMRRFVIAALAIAVLAAGTLVIARTAPVNDEEAAKEAHRAFVANLGKGDQKAIGALLDRRF
Ga0224452_105049023300022534Groundwater SedimentMRRFVIAALAIAVSAAGTLVIARTAPVNDEEAAKEAHRAFVANLGKGDQKAIGALLDRRFTWTDV
Ga0222622_1096020913300022756Groundwater SedimentMRRFVIAALAIAVLAAGTLVIARTAPVNDEQAAKEAHRAFVANLGKGDQKAIGALLDRRFTWTDAEGRA
Ga0179591_115903653300024347Vadose Zone SoilLLALAVAVLAAGTLVIARTAPVGDEQAAKEAHRAFVANLGKRDQKAIGAVLDRRFTWTDAEGRTLTRRETLKELPALAAANAADGDVQAHF
Ga0207700_1151381013300025928Corn, Switchgrass And Miscanthus RhizosphereMRRFVIAAVAIAVLAAGTLVIGRTAPVDDEQAASKAHAAFVASLRKGDQKAIGAL
Ga0207661_1103830213300025944Corn RhizosphereMRRFVIAALAVAVLAAGTLVIARTAPVSDEQAAKEAHRAFVANLGKRDQKAIGAVLDRRFTWTDAEGRTLTRRETLKELPALAAANAADG
Ga0207679_1168777323300025945Corn RhizosphereMRRFVIAAVAVAVLAAGTLVIGRTAPVDDEQAASKAHAAFVASLRKGDQKAIGALLDR
Ga0207640_1074060323300025981Corn RhizosphereMRRFVIAALAVAVLAAGTLVIARTAPVSDEQAAKEAHRAFVANLGKRDQKAIGAVLDRRFTWTDAEGRTLTRRETLKELPALAAANA
Ga0207639_1159504823300026041Corn RhizosphereMRRFVIAALAVAVLAAGTLVIARTAPVSDEQAAKEAHRAFVANLGKRDQKAIGAVLDRRFTWTDAEGRTLTRRETLKELPALAAANATGG
Ga0207678_1005998913300026067Corn RhizosphereMRRFVIAALAVAVLAAGTLVIARTAPVSDEQAAKEAHRAFVANLGKRDQEAIGAVLDRRFTWTDAEGR
Ga0207702_1238411723300026078Corn RhizosphereMRRFVIAAVAVAVLAAGTLVIGRTAPVDDEQAASKAHAAFVASLRKGDQKAIGALLDRRFIWTDAEGRTFTRREALKALSAPATANPDNDIHTRFYG
Ga0207676_1131186213300026095Switchgrass RhizosphereMRRLAIAAVALAGLAAGTLLIGRTGAVDDEQAAKQADRAFVANLDKGDPKAIGGTLDRRFSWTNTDGLTRNRRDTLKYWFGYGGRALAGM
Ga0207676_1149386713300026095Switchgrass RhizosphereMRRFVIAAVAVAVLAAGTLVIGRTAPVDDEQAASKAHAAFVASLRKGDQKAIGALLDRHFIWTDAEG
Ga0207674_1086369313300026116Corn RhizosphereMRRFVIAAVAVAVLAAGTLVIGRTAPVDDEQAASKAHAAFVASLRKGDQKAIGALLDRRFIWTDAEGRTFTR
Ga0208997_101183923300027181Forest SoilMRRFVIAALAVAVLAAGTLVIARTAPVNDEQAAKEAHRAFVANLGKGDRKAIGAVLDRRFTWTDVEGRALTRRETLKELPALAAANAA
Ga0208984_108911113300027546Forest SoilMRRVAIALLALAGLAAAGTFLVGHTRAVDDEQAAKDADRAFVANLDKGDQKATGGMLDRRFTWTNTEGLSRNRRDTIKDFAALAAASKGDSDFQTHF
Ga0207981_100954713300027560SoilMRRFVIAALAVAVLAAGTLVIARTAPVSDEQAAKEAHRAFVANLGKRDQKAIGAVLDRRFTWTDAEGRTLTRRETLKELPALAAANAADGDVQTHF
Ga0209106_102379413300027616Forest SoilMRRFVIAALAVAVLAAGTLVIARTAPVNDEQAAKEAHRAFVANLGKGDRKAIGAVLDRRFTWTDVE
Ga0208988_104946113300027633Forest SoilMRRFVIAALAVAVLAAGTLVIARTAPVNDEQAAKEAHRAFVANLGKGDRKAIGAVLDRRFTWTDVEGRAL
Ga0209813_1031520913300027866Populus EndosphereMRRFVIAALAIAVLAAGTLVIARTAPVGDEQAAREAHRAFVANLGKRDQKAIGAVLDRRFTWTDAEGGTLTRRETLKDLPALAACSSPTG
Ga0268264_1145875723300028381Switchgrass RhizosphereMRRFVIAAVAVAVLAAGTLVIGRTAPVDDEQAASKAHAAFVASLHKGDQKAIGAVLDRRFIWTDAEGR
Ga0247822_1152669823300028592SoilMRRFVIAAVAVAVLAAGTLVIGRTAPVDDEQAASKAHAAFVASLRKGDQKAIGALLDRRFIWTDAEGRTFTRRGQRLE
Ga0307309_1022016013300028714SoilMRRFVIAALAVAVLAAGTLVIARTAPVSDEQAAKEAHRAFIANLGKRDQKAIGAVLDRRFTWTDTEGRTLTRRDTLKELPALAAANA
Ga0307297_1004855523300028754SoilMRRFVIAALAIAVLAAGTLVIARTAPVDDEQAAKEAHRAFVANLGKGDQKAIGALLDRRFTWTD
Ga0307316_1014056623300028755SoilMRRFVIAALAIVVLAAGTLVIARTAPVNDEQAAKAAHRAFVANLGKGDQKGVGAVLDRRFTWTDAEGRALTRRETLKELPALAAANAGDSDV
Ga0307280_1023920713300028768SoilMRRFVIAALAIAVLAAGTLVIARTAPVDDEQAAKEAHRAFVANLGKGDQKAIGALLDRRFTWTDAEGRALTRRGTG
Ga0307288_1030361723300028778SoilMRRFVIAALAIAVLAAGTLVIARTAPVNDEQAAKEAHRAFVANLGKGDQKAIGALLDRRFTWTDAEGRALTRRETLKDLPALAAANPGDGDVQT
Ga0307282_1010750323300028784SoilMRRFVIAALAIAVSAAGTLVIARTAPVNDEEAAKEAHRAFVANLGKGDQKAIGALLDRRFTWTDAEGRALTRRETLKDLPALAAANPGDGDVQTHF
Ga0307287_1026036523300028796SoilMRRFVIAALAIAVLAAGTLVIARTAPVNDEQAAKEAHRAFVANLGKGDQKAIGALLDRRFTWTDAEGRALTRRETLKDLPALAAAN
Ga0307503_1082742923300028802SoilMRRIVIAAVALASLAAGTLVIERSRAINDEQVAKDAERAFVANLAKGDQKAISSVLDRRFAWTDTEGLTRNRRDTLKDFAALAAATKGGDSDVQTNFYRR
Ga0307294_1023029723300028810SoilMRRFVIAALAVAVLAAATLVIARTAPVSDEQAAKEAHRAFIANLGKRDQKAIGAVLDRRFTWTDTEGRTLTRRDTLKELPALAAANAAD
Ga0307292_1021324523300028811SoilMRRFVIAALAVAVLAAGTRVIARTAPVSDEQAAKEAHRAFVANLGKRDQKAIGAVLDRRFTWTDAEGRTLTRR
Ga0307302_1029744813300028814SoilMRRFVIAALAIAVLAAGTLVIARTAPVNDEQAAKEAHRAFVANLGKGDQKAIGALLDRRF
Ga0307296_1036088913300028819SoilMRRFVIAALAIVVLAAGTLVIARTAPVNDEQAAKAAHRAFVANLGKGDQKGVGAVLDRRFTWTDAEGRALTRRETLK
Ga0307296_1058416623300028819SoilMRRVVIALLALAGLAAAGTFLVGHTRAVDDEQAAKDADRAFVANLDKGDQKATGGMLDRRFTWTNTEGLSRNRRDTLKDFAALAAASKGDSDVQ
Ga0307312_1096207113300028828SoilMRRFVIAALAIAVLAAGTLVIARTAPVNDEQAAKEAHRAFVANLGKGDQKAIGALLDRRFTWTDAEGRALTRRETLKDLPALAAANPGDGDV
Ga0307314_1002032613300028872SoilMRRFVIAALAVAVLAAGTRVIARTAPVSDEQAAKEAHRAFVANLGKRDQKAIGAVLDRRFTWTDAEGRTLTRRETLKELPAL
Ga0307286_1017541723300028876SoilMRRVVIALLALAVLVAGTLFISRTRAVDDEQAAKDADRTFTANLDKGDQKAVGGMLDRRFTWTNTEGLPRNLRDTIKD
Ga0307286_1039617523300028876SoilMRRFVIAALAVAVLAAGTLVIARTAPVSDEQAAKEAHRAFVANLGKRDQKAIGAVLDRRFTWTDAEGRTLTRRDTLKELPTLAAANAA
Ga0307300_1020271913300028880SoilMRRFVIAALAIAVLAAGTLVIARTAPVNDEQAAKEAHRAFVANLGKGDQKAIGALLDRRFTWTDVEGRA
Ga0307499_1009048213300031184SoilMRRFVIAALAVAVLAAGTLVIARTAPVSDEQAAKEAHRAFVANLGKRDQKAIGAVLDRRFTWTD
Ga0307495_1000334513300031199SoilMRRFVIAALAIVVLAAGTLVIARTAPVNDEQAAKAAHRAFVTNLGKGDQKAIGAVLDR
Ga0307497_1063425223300031226SoilMRRFVIAALAITVLAAGTLVIARTAPVDDEQAAKEAHRAFVANLGKGDQKAIGALLDRRFTWTDAEGRALTRRE
Ga0318494_1080165713300031751SoilMKPGHKTMRRLLIAAAATAVLAAGTLVIGRTAPGDEEQAARDADRAFIANLRKGDQRAVGALLGRRFTFIDREG
Ga0318511_1032375813300031845SoilMRRLLIAAAATAVLAAGTLVIGRTAPGDEEQAARDADRAFIANLRKGDQRAVGALLGRRFTFIDREGKTRSRRET
Ga0306919_1052499013300031879SoilMKPGHKTMRRLLIAAAATAVLAAGTLVIGRTAPGDEEQAARDADRAFIANLRKGDQRAVGALLG
Ga0318544_1020566813300031880SoilMRRLLIAAAATAVLAAGTLVIGRTAPGDEEQAARDADRAFIANLRKGDQRAVGALLGRRFTFIDREGKTRSR
Ga0306925_1100542323300031890SoilMRRIVIAAVALASVAAGTLIIERSRAIDDQQVAKEAERTFLANLAKGDAKAISGALDRRFTWTDSDGLTRNRRDTLKEIAALAAAAKGD
Ga0318531_1024963313300031981SoilMRRLLIAAAATAVLAAGTLVIGRTAPGDEEQAARDADRAFIANLRKGDQRAVGALL
Ga0318558_1049159423300032044SoilMRRLLIAAAATAVLAAGTLVIGRTAPGDEEQAARDADRAFIANLRKGDQRAVGALLGRRFTFIDR
Ga0318524_1033055513300032067SoilMRRLLIAAAATAVLAAGTLVIGRTAPGDEEQAARDADRAFIANLRKGDQRAVGALLGRRF
Ga0306920_10255519813300032261SoilMRRIVIAAVALASVAAGTLIIERSRAIDDQQVAKEAERTFLANLAKGDAKAISGALDRRFTWTDSDGLTRNRRDTLK
Ga0310811_1013755953300033475SoilMRRFVIAAVAVAVLAAGTLVIGRTAPVDDEQAASKAHAAFVASLRKGDQKAIGALLDRRFIW
Ga0247829_1031669913300033550SoilMRRFVIAALAVAVLAAGTLVIARTAPVSDEQAAKEAHRAFVANLGKRDQEAIGAVLDRRF
Ga0247830_1035521513300033551SoilMRRFVIAALAVAVLAAGTLVIARTAPVSDEQAAKEAHRAFVANLGKRDQKAIGAVLDRRFTWTDAEGRTLTRRETLKELPALAAANAADGDV
Ga0364933_150507_322_6003300034150SedimentMRRFVIAALAVAVLAAGTLVIARTAPVSDEQAAKEAHRAFVANLGKRDQKAIGAVLDRRFTWTDAEGRTLTRRETLKELPALAAANAADGDVR
Ga0373948_0152174_319_5793300034817Rhizosphere SoilMRRFVIAAVAVAVLAAGTLVIGRTAPVDDEQAASKAHAAFVASLRKGDQKAIGAVLDRRFIWTDAEGRTFTRREALQALSAPATANP

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Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
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