NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F065025

Metagenome / Metatranscriptome Family F065025

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F065025
Family Type Metagenome / Metatranscriptome
Number of Sequences 128
Average Sequence Length 56 residues
Representative Sequence MTRKRLVRILLTLAVTGGCLAYILWQLNVTRTAHILVHSNLGWFAGAVVVMLAGVPP
Number of Associated Samples 111
Number of Associated Scaffolds 128

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 42.97 %
% of genes near scaffold ends (potentially truncated) 98.44 %
% of genes from short scaffolds (< 2000 bps) 92.19 %
Associated GOLD sequencing projects 107
AlphaFold2 3D model prediction Yes
3D model pTM-score0.42

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Unclassified (78.125 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil
(22.656 % of family members)
Environment Ontology (ENVO) Unclassified
(25.781 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(50.781 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Transmembrane (alpha-helical) Signal Peptide: Yes Secondary Structure distribution: α-helix: 56.47%    β-sheet: 0.00%    Coil/Unstructured: 43.53%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.42
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 128 Family Scaffolds
PF01041DegT_DnrJ_EryC1 92.19
PF01071GARS_A 1.56
PF00072Response_reg 0.78
PF00664ABC_membrane 0.78
PF13535ATP-grasp_4 0.78
PF03706LPG_synthase_TM 0.78
PF01315Ald_Xan_dh_C 0.78
PF01370Epimerase 0.78
PF00990GGDEF 0.78

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 128 Family Scaffolds
COG0399dTDP-4-amino-4,6-dideoxygalactose transaminaseCell wall/membrane/envelope biogenesis [M] 92.19
COG0436Aspartate/methionine/tyrosine aminotransferaseAmino acid transport and metabolism [E] 92.19
COG0520Selenocysteine lyase/Cysteine desulfuraseAmino acid transport and metabolism [E] 92.19
COG0626Cystathionine beta-lyase/cystathionine gamma-synthaseAmino acid transport and metabolism [E] 92.19
COG1104Cysteine desulfurase/Cysteine sulfinate desulfinase IscS or related enzyme, NifS familyAmino acid transport and metabolism [E] 92.19
COG2873O-acetylhomoserine/O-acetylserine sulfhydrylase, pyridoxal phosphate-dependentAmino acid transport and metabolism [E] 92.19
COG0458Carbamoylphosphate synthase large subunitAmino acid transport and metabolism [E] 3.12
COG0026Phosphoribosylaminoimidazole carboxylase (NCAIR synthetase)Nucleotide transport and metabolism [F] 1.56
COG0027Formate-dependent phosphoribosylglycinamide formyltransferase (GAR transformylase)Nucleotide transport and metabolism [F] 1.56
COG0045Succinyl-CoA synthetase, beta subunitEnergy production and conversion [C] 1.56
COG0151Phosphoribosylamine-glycine ligaseNucleotide transport and metabolism [F] 1.56
COG0439Biotin carboxylaseLipid transport and metabolism [I] 1.56
COG1038Pyruvate carboxylaseEnergy production and conversion [C] 1.56
COG1181D-alanine-D-alanine ligase or related ATP-grasp enzymeCell wall/membrane/envelope biogenesis [M] 1.56
COG4770Acetyl/propionyl-CoA carboxylase, alpha subunitLipid transport and metabolism [I] 1.56
COG0392Predicted membrane flippase AglD2/YbhN, UPF0104 familyCell wall/membrane/envelope biogenesis [M] 0.78


 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
UnclassifiedrootN/A78.12 %
All OrganismsrootAll Organisms21.88 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300000956|JGI10216J12902_126777438Not Available933Open in IMG/M
3300001536|A1565W1_10090158Not Available712Open in IMG/M
3300002077|JGI24744J21845_10016794All Organisms → cellular organisms → Bacteria1457Open in IMG/M
3300002908|JGI25382J43887_10469839All Organisms → cellular organisms → Bacteria533Open in IMG/M
3300004157|Ga0062590_102174166Not Available580Open in IMG/M
3300005158|Ga0066816_1020117Not Available558Open in IMG/M
3300005164|Ga0066815_10093932Not Available556Open in IMG/M
3300005176|Ga0066679_10704574Not Available654Open in IMG/M
3300005330|Ga0070690_100029114All Organisms → cellular organisms → Bacteria3423Open in IMG/M
3300005332|Ga0066388_101263218Not Available1269Open in IMG/M
3300005336|Ga0070680_101559809All Organisms → cellular organisms → Bacteria572Open in IMG/M
3300005337|Ga0070682_101337991All Organisms → cellular organisms → Bacteria610Open in IMG/M
3300005353|Ga0070669_100979262Not Available725Open in IMG/M
3300005434|Ga0070709_10577585Not Available863Open in IMG/M
3300005440|Ga0070705_101805759All Organisms → cellular organisms → Bacteria → Proteobacteria519Open in IMG/M
3300005445|Ga0070708_100203155All Organisms → cellular organisms → Bacteria1855Open in IMG/M
3300005445|Ga0070708_102012841Not Available535Open in IMG/M
3300005447|Ga0066689_10044662All Organisms → cellular organisms → Bacteria2348Open in IMG/M
3300005456|Ga0070678_100003943All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia8340Open in IMG/M
3300005526|Ga0073909_10390213Not Available653Open in IMG/M
3300005530|Ga0070679_102102570Not Available514Open in IMG/M
3300005544|Ga0070686_100179663All Organisms → cellular organisms → Bacteria1502Open in IMG/M
3300005544|Ga0070686_100786102All Organisms → cellular organisms → Bacteria766Open in IMG/M
3300005546|Ga0070696_101035441Not Available687Open in IMG/M
3300005552|Ga0066701_10846376Not Available543Open in IMG/M
3300005554|Ga0066661_10506221All Organisms → cellular organisms → Bacteria729Open in IMG/M
3300005559|Ga0066700_10962150All Organisms → cellular organisms → Bacteria → Proteobacteria564Open in IMG/M
3300005560|Ga0066670_10287638Not Available999Open in IMG/M
3300005561|Ga0066699_10616719Not Available779Open in IMG/M
3300005561|Ga0066699_10771433Not Available680Open in IMG/M
3300005568|Ga0066703_10731626Not Available568Open in IMG/M
3300005569|Ga0066705_10092837All Organisms → cellular organisms → Bacteria → Proteobacteria1782Open in IMG/M
3300006032|Ga0066696_10245717All Organisms → cellular organisms → Bacteria1155Open in IMG/M
3300006038|Ga0075365_11033309All Organisms → cellular organisms → Bacteria579Open in IMG/M
3300006173|Ga0070716_101205753Not Available608Open in IMG/M
3300007258|Ga0099793_10543199Not Available579Open in IMG/M
3300009137|Ga0066709_101036062Not Available1203Open in IMG/M
3300009148|Ga0105243_10218683All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales1682Open in IMG/M
3300009789|Ga0126307_11552403Not Available537Open in IMG/M
3300009811|Ga0105084_1106396Not Available533Open in IMG/M
3300010304|Ga0134088_10726377Not Available500Open in IMG/M
3300010373|Ga0134128_12464041Not Available573Open in IMG/M
3300010373|Ga0134128_13192374Not Available503Open in IMG/M
3300010399|Ga0134127_12754329Not Available571Open in IMG/M
3300010999|Ga0138505_100031799Not Available721Open in IMG/M
3300011271|Ga0137393_11038380Not Available697Open in IMG/M
3300011997|Ga0120162_1098535All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium617Open in IMG/M
3300011998|Ga0120114_1051708Not Available805Open in IMG/M
3300012019|Ga0120139_1007781All Organisms → cellular organisms → Bacteria2522Open in IMG/M
3300012019|Ga0120139_1160662Not Available588Open in IMG/M
3300012096|Ga0137389_11017433Not Available710Open in IMG/M
3300012189|Ga0137388_11308061Not Available664Open in IMG/M
3300012198|Ga0137364_10157353All Organisms → cellular organisms → Bacteria1646Open in IMG/M
3300012198|Ga0137364_10748983Not Available738Open in IMG/M
3300012200|Ga0137382_11053803Not Available582Open in IMG/M
3300012207|Ga0137381_11067085Not Available696Open in IMG/M
3300012210|Ga0137378_10708985Not Available917Open in IMG/M
3300012349|Ga0137387_10494614Not Available888Open in IMG/M
3300012358|Ga0137368_10168365Not Available1595Open in IMG/M
3300012360|Ga0137375_11120343Not Available609Open in IMG/M
3300012362|Ga0137361_10372682Not Available1311Open in IMG/M
3300012532|Ga0137373_10084525All Organisms → cellular organisms → Bacteria2817Open in IMG/M
3300012532|Ga0137373_10561623Not Available865Open in IMG/M
3300012582|Ga0137358_10731991Not Available661Open in IMG/M
3300012929|Ga0137404_10183946Not Available1761Open in IMG/M
3300012951|Ga0164300_10800613Not Available584Open in IMG/M
3300012955|Ga0164298_10198000Not Available1172Open in IMG/M
3300012958|Ga0164299_10388258Not Available892Open in IMG/M
3300012985|Ga0164308_10017546All Organisms → cellular organisms → Bacteria4088Open in IMG/M
3300012985|Ga0164308_10343298Not Available1202Open in IMG/M
3300012985|Ga0164308_12081355Not Available529Open in IMG/M
3300013772|Ga0120158_10524178Not Available515Open in IMG/M
3300013831|Ga0120126_1054807Not Available504Open in IMG/M
3300018027|Ga0184605_10203522Not Available899Open in IMG/M
3300018027|Ga0184605_10339468Not Available679Open in IMG/M
3300018027|Ga0184605_10369312Not Available646Open in IMG/M
3300018054|Ga0184621_10096624Not Available1041Open in IMG/M
3300018061|Ga0184619_10102519Not Available1286Open in IMG/M
3300018061|Ga0184619_10352133Not Available672Open in IMG/M
3300018071|Ga0184618_10127418Not Available1023Open in IMG/M
3300018076|Ga0184609_10431787Not Available608Open in IMG/M
3300018431|Ga0066655_11395323Not Available508Open in IMG/M
3300018433|Ga0066667_12267493Not Available507Open in IMG/M
3300019279|Ga0184642_1549420Not Available789Open in IMG/M
3300019878|Ga0193715_1037546Not Available1047Open in IMG/M
3300020062|Ga0193724_1030014Not Available1159Open in IMG/M
3300021073|Ga0210378_10216650Not Available729Open in IMG/M
3300021080|Ga0210382_10260069Not Available760Open in IMG/M
3300021344|Ga0193719_10169508Not Available938Open in IMG/M
3300022694|Ga0222623_10210812Not Available753Open in IMG/M
3300023058|Ga0193714_1041885Not Available666Open in IMG/M
3300025885|Ga0207653_10049257Not Available1398Open in IMG/M
3300025922|Ga0207646_11797211Not Available524Open in IMG/M
3300025929|Ga0207664_11552565Not Available584Open in IMG/M
3300025929|Ga0207664_11772968Not Available540Open in IMG/M
3300025938|Ga0207704_10168326Not Available1568Open in IMG/M
3300025972|Ga0207668_10091061All Organisms → cellular organisms → Bacteria2240Open in IMG/M
3300025981|Ga0207640_10126759All Organisms → cellular organisms → Bacteria1839Open in IMG/M
3300026306|Ga0209468_1077021Not Available1116Open in IMG/M
3300026328|Ga0209802_1078486Not Available1539Open in IMG/M
3300026332|Ga0209803_1062186All Organisms → cellular organisms → Bacteria1610Open in IMG/M
3300026343|Ga0209159_1266674Not Available521Open in IMG/M
3300026529|Ga0209806_1136280All Organisms → cellular organisms → Bacteria → Proteobacteria962Open in IMG/M
3300026540|Ga0209376_1400165Not Available513Open in IMG/M
3300026550|Ga0209474_10124861Not Available1702Open in IMG/M
3300026552|Ga0209577_10049961Not Available3534Open in IMG/M
3300027465|Ga0207626_103702Not Available571Open in IMG/M
3300027748|Ga0209689_1181414Not Available952Open in IMG/M
3300027846|Ga0209180_10239386Not Available1045Open in IMG/M
3300028715|Ga0307313_10011092All Organisms → cellular organisms → Bacteria2300Open in IMG/M
3300028715|Ga0307313_10218098Not Available593Open in IMG/M
3300028719|Ga0307301_10280578Not Available546Open in IMG/M
3300028744|Ga0307318_10176215Not Available737Open in IMG/M
3300028754|Ga0307297_10368532Not Available527Open in IMG/M
3300028755|Ga0307316_10359584Not Available536Open in IMG/M
3300028755|Ga0307316_10413681Not Available500Open in IMG/M
3300028778|Ga0307288_10039093Not Available1600Open in IMG/M
3300028784|Ga0307282_10165256Not Available1051Open in IMG/M
3300028784|Ga0307282_10468112Not Available612Open in IMG/M
3300028784|Ga0307282_10514569Not Available581Open in IMG/M
3300028792|Ga0307504_10330591Not Available582Open in IMG/M
3300028796|Ga0307287_10403089Not Available515Open in IMG/M
3300028810|Ga0307294_10096452Not Available931Open in IMG/M
3300028811|Ga0307292_10000033All Organisms → cellular organisms → Bacteria35961Open in IMG/M
3300028872|Ga0307314_10109895Not Available761Open in IMG/M
3300031093|Ga0308197_10349353Not Available562Open in IMG/M
3300031170|Ga0307498_10054682Not Available1094Open in IMG/M
3300031716|Ga0310813_11074212Not Available737Open in IMG/M



 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil22.66%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil16.41%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil14.06%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment6.25%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere6.25%
PermafrostEnvironmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost5.47%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil3.12%
Groundwater SedimentEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment2.34%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil2.34%
Corn RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere2.34%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere2.34%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil1.56%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil1.56%
Agricultural SoilEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil1.56%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere1.56%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment0.78%
Serpentine SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil0.78%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil0.78%
Surface SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil0.78%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil0.78%
Groundwater SandEnvironmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand0.78%
SoilEnvironmental → Terrestrial → Agricultural Field → Unclassified → Unclassified → Soil0.78%
Corn RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere0.78%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere0.78%
Corn, Switchgrass And Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere0.78%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere0.78%
Populus EndosphereHost-Associated → Plants → Roots → Bulk Soil → Unclassified → Populus Endosphere0.78%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere0.78%

Visualization
Powered by ApexCharts



Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300000956Soil microbial communities from Great Prairies - Kansas, Native Prairie soilEnvironmentalOpen in IMG/M
3300001536Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - (A15-65cm-8A)- 1 week illuminaEnvironmentalOpen in IMG/M
3300002077Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3Host-AssociatedOpen in IMG/M
3300002908Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_40cmEnvironmentalOpen in IMG/M
3300004157Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2EnvironmentalOpen in IMG/M
3300005158Soil and rhizosphere microbial communities from Laval, Canada - mgHAAEnvironmentalOpen in IMG/M
3300005164Soil and rhizosphere microbial communities from Laval, Canada - mgLACEnvironmentalOpen in IMG/M
3300005176Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128EnvironmentalOpen in IMG/M
3300005330Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaGEnvironmentalOpen in IMG/M
3300005332Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300005336Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaGEnvironmentalOpen in IMG/M
3300005337Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaGEnvironmentalOpen in IMG/M
3300005353Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaGHost-AssociatedOpen in IMG/M
3300005434Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaGEnvironmentalOpen in IMG/M
3300005440Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaGEnvironmentalOpen in IMG/M
3300005445Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaGEnvironmentalOpen in IMG/M
3300005447Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138EnvironmentalOpen in IMG/M
3300005456Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaGHost-AssociatedOpen in IMG/M
3300005526Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1EnvironmentalOpen in IMG/M
3300005530Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaGEnvironmentalOpen in IMG/M
3300005544Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaGEnvironmentalOpen in IMG/M
3300005546Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaGEnvironmentalOpen in IMG/M
3300005552Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150EnvironmentalOpen in IMG/M
3300005554Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110EnvironmentalOpen in IMG/M
3300005559Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149EnvironmentalOpen in IMG/M
3300005560Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_119EnvironmentalOpen in IMG/M
3300005561Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148EnvironmentalOpen in IMG/M
3300005568Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152EnvironmentalOpen in IMG/M
3300005569Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154EnvironmentalOpen in IMG/M
3300006032Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145EnvironmentalOpen in IMG/M
3300006038Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5Host-AssociatedOpen in IMG/M
3300006173Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaGEnvironmentalOpen in IMG/M
3300007258Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3EnvironmentalOpen in IMG/M
3300009137Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158EnvironmentalOpen in IMG/M
3300009148Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaGHost-AssociatedOpen in IMG/M
3300009789Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot28EnvironmentalOpen in IMG/M
3300009811Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N3_20_30EnvironmentalOpen in IMG/M
3300010304Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09182015EnvironmentalOpen in IMG/M
3300010373Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4EnvironmentalOpen in IMG/M
3300010399Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3EnvironmentalOpen in IMG/M
3300010999Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t3i015EnvironmentalOpen in IMG/M
3300011271Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaGEnvironmentalOpen in IMG/M
3300011997Permafrost microbial communities from Nunavut, Canada - A15_80cm_18MEnvironmentalOpen in IMG/M
3300011998Permafrost microbial communities from Nunavut, Canada - A30_35cm_6MEnvironmentalOpen in IMG/M
3300012019Permafrost microbial communities from Nunavut, Canada - A7_5cm_12MEnvironmentalOpen in IMG/M
3300012096Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaGEnvironmentalOpen in IMG/M
3300012189Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaGEnvironmentalOpen in IMG/M
3300012198Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaGEnvironmentalOpen in IMG/M
3300012200Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaGEnvironmentalOpen in IMG/M
3300012207Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaGEnvironmentalOpen in IMG/M
3300012210Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaGEnvironmentalOpen in IMG/M
3300012349Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaGEnvironmentalOpen in IMG/M
3300012358Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_100_16 metaGEnvironmentalOpen in IMG/M
3300012360Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_113_16 metaGEnvironmentalOpen in IMG/M
3300012362Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaGEnvironmentalOpen in IMG/M
3300012532Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_80_16 metaGEnvironmentalOpen in IMG/M
3300012582Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaGEnvironmentalOpen in IMG/M
3300012929Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012951Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MGEnvironmentalOpen in IMG/M
3300012955Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MGEnvironmentalOpen in IMG/M
3300012958Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MGEnvironmentalOpen in IMG/M
3300012985Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MGEnvironmentalOpen in IMG/M
3300013772Permafrost microbial communities from Nunavut, Canada - A10_80_0.25MEnvironmentalOpen in IMG/M
3300013831Permafrost microbial communities from Nunavut, Canada - A21_5cm_6MEnvironmentalOpen in IMG/M
3300018027Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_coexEnvironmentalOpen in IMG/M
3300018054Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_b1EnvironmentalOpen in IMG/M
3300018061Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_b1EnvironmentalOpen in IMG/M
3300018071Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_b1EnvironmentalOpen in IMG/M
3300018076Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60_coexEnvironmentalOpen in IMG/M
3300018431Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104EnvironmentalOpen in IMG/M
3300018433Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116EnvironmentalOpen in IMG/M
3300019279Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300019878Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2m2EnvironmentalOpen in IMG/M
3300020062Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2a1EnvironmentalOpen in IMG/M
3300021073Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60_b1 redoEnvironmentalOpen in IMG/M
3300021080Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_coex redoEnvironmentalOpen in IMG/M
3300021344Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2a2EnvironmentalOpen in IMG/M
3300022694Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30_coexEnvironmentalOpen in IMG/M
3300023058Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2m1EnvironmentalOpen in IMG/M
3300025885Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025922Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025929Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025938Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300025972Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025981Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026306Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_102 (SPAdes)EnvironmentalOpen in IMG/M
3300026328Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129 (SPAdes)EnvironmentalOpen in IMG/M
3300026332Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138 (SPAdes)EnvironmentalOpen in IMG/M
3300026343Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144 (SPAdes)EnvironmentalOpen in IMG/M
3300026529Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152 (SPAdes)EnvironmentalOpen in IMG/M
3300026540Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134 (SPAdes)EnvironmentalOpen in IMG/M
3300026550Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145 (SPAdes)EnvironmentalOpen in IMG/M
3300026552Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109 (SPAdes)EnvironmentalOpen in IMG/M
3300027465Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-BECK03-A (SPAdes)EnvironmentalOpen in IMG/M
3300027748Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149 (SPAdes)EnvironmentalOpen in IMG/M
3300027846Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300028715Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_203EnvironmentalOpen in IMG/M
3300028719Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_182EnvironmentalOpen in IMG/M
3300028744Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_367EnvironmentalOpen in IMG/M
3300028754Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_157EnvironmentalOpen in IMG/M
3300028755Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_356EnvironmentalOpen in IMG/M
3300028778Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_142EnvironmentalOpen in IMG/M
3300028784Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_121EnvironmentalOpen in IMG/M
3300028792Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 19_SEnvironmentalOpen in IMG/M
3300028796Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_141EnvironmentalOpen in IMG/M
3300028810Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_151EnvironmentalOpen in IMG/M
3300028811Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_149EnvironmentalOpen in IMG/M
3300028872Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_204EnvironmentalOpen in IMG/M
3300031093Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_198 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031170Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 12_SEnvironmentalOpen in IMG/M
3300031716Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3EnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
JGI10216J12902_12677743813300000956SoilMTRGRALRIVLTLAVTGACLAYLLWKLDIRRTAHILVHADLLWFTGAVAVMALGV
A1565W1_1009015813300001536PermafrostMIRKRLVRVLLTLAVTGGCLAYILWQLDVTRTAHILV
JGI24744J21845_1001679433300002077Corn, Switchgrass And Miscanthus RhizosphereMTRKRLVRVLLTLVVTGGCLGYILWQLNVRQTVHILVHSNLAWFAGAVLVML
JGI25382J43887_1046983913300002908Grasslands SoilMTRRRFVRILLTLAVSGGCLAYILWQLNVRRTAHILVHSDLGWFAGAVLVMLAGVPPMAYRWQKLLEA
Ga0062590_10217416623300004157SoilMTRKTLVRVALTLIVTGGCLAYILWQLDVRRTVHILVHSNLGWFAAAVLVMLVGVPPMAY
Ga0066816_102011713300005158SoilMTRKRLVRVLLTLVVTGGCLGYILWQLDVRQTVHILVHSNLAWFAGAVLVMLAGVPPMAYRWQKLLEARGI
Ga0066815_1009393213300005164SoilMTRKRLVRVLLTLVVTGGCLGYILWQLDVRQTVHILVHSNLAWFAGAVLVMLAGVPPMA
Ga0066679_1070457413300005176SoilMTRRRAVRIVLTLAVTGACLAYILWQLDVRRTARILVHADLGWFLGSIGVMAVGVPPMAW
Ga0070690_10002911413300005330Switchgrass RhizosphereMTRKRLVRVLLTLVVTGGCLGYILWQLNVRQTVHILVHSNLAWFAGAVLVMLAGVPPMAYRWQKLLEARGIR
Ga0066388_10126321813300005332Tropical Forest SoilMTRRKWVRVGLTLAVTGLCLGYILWQLDVRRTLDILVHAHLGWFAGAVLIMFVGVPP
Ga0070680_10155980923300005336Corn RhizosphereMTQKRLVRVLLTLAVTGGCLAYILWQLNVTRTAHILVHSNLAWFAGAVFVMLAGVPPMAYRWQKL
Ga0070682_10133799113300005337Corn RhizosphereMTRKRLVRVLLTLVVTGGCLAYILWQLDVAQTVHILVHSQLGWFAGAVIVMLAGVPPMAYRWQR
Ga0070669_10097926213300005353Switchgrass RhizosphereMTRKRLVRVLLTLVVTGGCLGYILWQLNVRQTVHILVHSNLAWFAGAVLVMLAG
Ga0070709_1057758513300005434Corn, Switchgrass And Miscanthus RhizosphereMTRKRLVRVLLTLVVTGGCLGYILWQLNVRQTVHILVHSNLAWFAGAVLVMLAGVPPMAYRWQKLLEAR
Ga0070705_10180575923300005440Corn, Switchgrass And Miscanthus RhizosphereMTQKRLVRVLLTLAVTGGCLAYILWQLDVTRTAHILVHSNLAWFAGAVIVMLGGVPPMAYRW
Ga0070708_10020315513300005445Corn, Switchgrass And Miscanthus RhizosphereMTRGRLVRVLLTLAVTGGCLAYILWQLNVRRTVHILVHSNLGWFA
Ga0070708_10201284113300005445Corn, Switchgrass And Miscanthus RhizosphereVRKSLAVRLGLTLAITGGCLAYILWQLDVGRTVHILVHSNVAWFFGALAIMLGGVPPMAF
Ga0066689_1004466233300005447SoilMTRKALVRVALTLIVTGGCLAYILWQLNVSRTAHILVHSNLGWFAGAVVVMLAGVPPMAYRWQKLLAARGVR
Ga0070678_100003943103300005456Miscanthus RhizosphereMTRKRLVRVLLTLVVTGGCLGYILWQLNVRQTVHILVHSNLAWFAGAVLVMLAGVPPMA
Ga0073909_1039021313300005526Surface SoilMTRKQLVRILLTLVVTGGCLGYILWQLDVRQTVHILVHSNLAWFAG
Ga0070679_10210257013300005530Corn RhizosphereMTQKRLVRVLLTLAVTGGCLAYILWQLNVTRTAHILVHSNLGWFAGAVFVMLA
Ga0070686_10017966333300005544Switchgrass RhizosphereMTRKRLVRVLLTLVVTGGCLGYILWQLNVRQTVHILVHSNLAWFAGAVLVMLAGVP
Ga0070686_10078610223300005544Switchgrass RhizosphereMTRKKWVRVALTLAVTGLCLAYILWQLDVRRTLDILVHAHLGWFVGAVLIMFVGVPPMAFRWQKLL
Ga0070696_10103544113300005546Corn, Switchgrass And Miscanthus RhizosphereMTRKTLVRVALTLIVTGGCLAYILWQLDVRRTAHILVHSNL
Ga0066701_1084637613300005552SoilMTRKALVRVALTLIVTGGCLAYILWQLNVSRTAHILVHSNLGWFAGAV
Ga0066661_1050622123300005554SoilMTRRRLVRVLLTLAVTGGCLSYILWQLNVRRTVHILVHSNLGWFAARWS*
Ga0066700_1096215013300005559SoilMTRRRLVRVLLTLAVTGGCLAYILWQLNVRRTVHILVHSNLGWFAGAVVVMLAGVPPMAFRWQKLLEARG
Ga0066670_1028763813300005560SoilMTRKALVRVALTLIVTGGCLAYILWQLNVSRTAHILVHSNLGWFAGAVVVMLAGVPPMAYRWQKLL
Ga0066699_1061671913300005561SoilMTRKALVRVSLTLIVSGACLAYILWQLDVRRTVHILVHSNLGWFAGAV
Ga0066699_1077143323300005561SoilVTKPRLVRIVLTLAITGGCLAYIFWQLDIRRTLDILVHSHLGWFFGAIAVMLGGVPPMAFRWQKLL
Ga0066703_1073162623300005568SoilMTRRRLVRILLTLAVSGGCLAYILWQLNVRRTAHILVHSDLGWF
Ga0066705_1009283733300005569SoilVKRGLVVRLALTLAITGGCLAYILWQLDVGRTVHILVHSQLGWFLGAVAIMLGGVPPMAFRWQKLLEARGVHERLGWLNRAYLV
Ga0066696_1024571723300006032SoilMTRKALVRVTLTLIVTGGCLAYILWQLNVSRTVHILVHSNLGWFAGAVIVMLAGVPPMAYRWQKLLQARGVRERLGWLIR
Ga0075365_1103330913300006038Populus EndosphereMTRKKWVRVALTLAVTGLCLAYILWQLDVRRTLDILVHAHLGWFAGAVLIMFAGVPP
Ga0070716_10120575323300006173Corn, Switchgrass And Miscanthus RhizosphereVTRRRAIRILLTLAVTGGCLAYILWQLNIGKTVRILVHANVGWF
Ga0099793_1054319923300007258Vadose Zone SoilVTRGRAIRIVLPLAVTGACLAYILWQLNVSRTARILVHSDLGWFAGALAV
Ga0066709_10103606213300009137Grasslands SoilMRRRQGGAGRLVRLGLTLAVTGGCLAYILWQLNVRRTAHILVHSNLGWGAGAGLVRLAGGPPA
Ga0105243_1021868313300009148Miscanthus RhizosphereMTRKRLVRVLLTLVVTGGCLAYILWQLDVTQTVHILVHSKLGWFAGAVIVMLAG
Ga0126307_1155240323300009789Serpentine SoilMNKRRAVRVSLTLLLTGLCLTYILWQLDVARTLDILLDAHLGWFLGAVAVMLGGVPPM
Ga0105084_110639613300009811Groundwater SandMTRGRLVRIILTLALTGGCLAYILWQLDVGQTVDILVHSHIGWFFGALAIMLGGIPPMAYRW
Ga0134088_1072637713300010304Grasslands SoilMTRRRLVRILLTLAVTGGCLAYILWQLNVRRTAHILIHSNLGWFAGAVLVMFVGVPPMAYRWQK
Ga0134128_1246404123300010373Terrestrial SoilMTRKRLVRIALTLAVTGGCLAYILWQLDVRKTAHILVHSNLAWFAGAVAVMLGGVPPMAY
Ga0134128_1319237423300010373Terrestrial SoilMTRKRLVRVLLTLVVTGGCLAYILWQLDVAQTVHILVHSQLGWFAGAVIVM
Ga0134127_1275432923300010399Terrestrial SoilMTRKRLVRVLLTLVVTGGCLGYILWQLNVRQTVHILVHSNLAWFAGAVLVMLAGVPPMAYRWQKLLEA
Ga0138505_10003179923300010999SoilVKRSTVVRLVLTLLITGGCLAYILWQLDVRQTIDIVVHSHLGWFFGAIAIMIGGVPPM
Ga0137393_1103838023300011271Vadose Zone SoilMTRRRLVRILLTLAVTGGCLAYILWQLDVTRTLHILVHSKLGWFAGAVLV
Ga0120162_109853513300011997PermafrostMRRRQGGAGRLVRLGVTLAVTGGCLAYILWQLNVRRTAHILVHSNLGWFAGAVFV
Ga0120114_105170823300011998PermafrostMTRKRLVRVLLTLAVTGGCLAYILWQLNVRRTAHILVHSNLG
Ga0120139_100778133300012019PermafrostMTRRRLVRLGLTLGVTGGCLAYILWQLNVRRTAHILVHSNLGWFAGAVLVMLAGVPPMAY
Ga0120139_116066223300012019PermafrostMTRKRLVRILLTLAVTGGCLGYILWQLNVRRTAHILVHSNLGWFAGAVLVMLAGVPPMAY
Ga0137389_1101743323300012096Vadose Zone SoilMTRRRLVRVLLTLAVTGGCLAYILWQLNVRRTLHILVH
Ga0137388_1130806123300012189Vadose Zone SoilLIRIALTLAVTGACLAYILWQLNVRRTAHILLHSDLAWFAGAVAVMLGGVPPMAFRWQKLLEAR
Ga0137364_1015735313300012198Vadose Zone SoilVKRSTVVRLVLTLLITGGCLAYILWQLDVSQTIDIVVHSHLGWFFGAIAIMIGGVPPMAF
Ga0137364_1074898323300012198Vadose Zone SoilMTRARAIRIALTVAVTGACLTYLLWKLNVHRTAHILVHANLLWFAGAVGVMAA
Ga0137382_1105380313300012200Vadose Zone SoilMTRRRLVRVLLTLAVTGGCLAYILWQLNVRRTVHILVHSDLGWFAGAVVVMLAGV
Ga0137381_1106708513300012207Vadose Zone SoilMTRKRLVRVLLTLAVTGGCLGYILWQLNVRRTAHILVHSNLGWFAGAVVVMLAGVPPMAYRWQQLLKARGIHERLPWLMR
Ga0137378_1070898513300012210Vadose Zone SoilMTRRRLVRVLLTLAVTGGCLAYILWQLNVRRTVHILVHSDLGWFAGAVV
Ga0137387_1049461413300012349Vadose Zone SoilVKRGLVVRLALTLAITGGCLAYILWQLDVGRTVHILVHSQLGWFLGAVAIMLGGVPPMAFRWQKL
Ga0137368_1016836513300012358Vadose Zone SoilMTTKRLVRVALTLGVTGACLAYILWQLDVGRTADILVHSDLGWFFGALAVMLGGVPPMAYRWQKLLEARGVR
Ga0137375_1112034323300012360Vadose Zone SoilMTRRRAVRILLTLAVTGACLAYILWQLDVRRTARILV
Ga0137361_1037268213300012362Vadose Zone SoilMTRRRLVRVLLTLAVTGGCLAYILWQLNVRRTVHI
Ga0137373_1008452553300012532Vadose Zone SoilVKRGLVVRLALTLTLTGGCLAYILWQLDVGRTAHIVVHSQLGWFFGALAIMLGGVPPMAFRW
Ga0137373_1056162313300012532Vadose Zone SoilMTRRRAVRILLTLAVTGACLAYILWQLDVRRTARILVHANLGWFLASIAVMAVGV
Ga0137358_1073199113300012582Vadose Zone SoilMTRRRLVRILLTLAVSGGCLAYILWQLNVRRTAHILV
Ga0137404_1018394623300012929Vadose Zone SoilMTRRRLVRILLTLAVTGGCLAYILWQLNVRRTAHILIHSNLGWFAGAVLVMIAGVPPMAYRWQKLRRLGGSASVSPG*
Ga0164300_1080061313300012951SoilMTQRRLVRVVLTLAVTGGCLAYILWQLDVTRTAHILVHSNLGWFAGAVFVML
Ga0164298_1019800013300012955SoilMTRKHLVRVLLTLAVTGGCLAYILWQLDVARTVHILVHSHLGWFA
Ga0164299_1038825823300012958SoilMTRKRLVRVLLTLVVTGGCLGYILWQLDVRQTVHLLVHSNLAWFAGAVIVMLAGVPPMAYRWQKLLE
Ga0164308_1001754613300012985SoilMTRKQLVRILLTLVVTGGCLGYILWQLDVRQTVHILVHSNLAWFAGAVIVMLAG
Ga0164308_1034329823300012985SoilVSRRTAIRLGLTLLVTGACLAYILWQLDIRQTVEIVLHSHLGWFFGAVAIMIAGVPPMAFRW
Ga0164308_1208135523300012985SoilMTRKQLVRILLTLVVTGGCLGYILWQLDVRQTVHILVHSNLAWFAGAV
Ga0120158_1052417813300013772PermafrostMTRKRLVRILLTLAVTGGCLAYILWQLDVRRTGHILV
Ga0120126_105480713300013831PermafrostMTQKRLVRVLLTLAVTGGCLAYILWQLNVRRTAHILVHSNLGWFAGAVFVMLAGVPPMAYRWQQL
Ga0184605_1020352213300018027Groundwater SedimentMTRARAIRIALTVAVTGACLTYLLWKLNVHRTAHILVHANLLWFAGAVGVMAAGVPPMAW
Ga0184605_1033946813300018027Groundwater SedimentMTRRRLVRILLTLAVTGGCLGYILWQLNVRRTAHILIHSNL
Ga0184605_1036931213300018027Groundwater SedimentMTRRRLVRVLLTLAVTGGCLAYILWQLNVRRTAHILIHSNL
Ga0184621_1009662423300018054Groundwater SedimentMTQKRLVRVLLTLAVTGGCLAYILWQLNVTRTAHILVHSNLGWFAGAVFVMLAGVPPMAFRWQKLL
Ga0184619_1010251923300018061Groundwater SedimentMTRKRLVRVLLTLAITGGCLGYILWQLDVRKTVHILVHSNLAWFAGAVI
Ga0184619_1035213323300018061Groundwater SedimentMTRRRLVRILLTLAVTGGCLGYILWQLNVRRTAHILIHSNLGWFAGAVVVMLAGVPPMAYRWQK
Ga0184618_1012741813300018071Groundwater SedimentMTRKRLVRILLTLAVTGGCLAYILWQLNVTRTAHILVHSNLGWFAGAVVVMLAGVPP
Ga0184609_1043178723300018076Groundwater SedimentMTRRRAVRIVLTLAVTGLCLAYILWQLDIGRTADILVHSDLGWFAGAVLVMLAGVPPMAFRWQ
Ga0066655_1139532323300018431Grasslands SoilMTRKALVRVALTLIVTGGCLAYILWQLNVSRTAHILVHSNYGWFAGAVVVMLAGVPPMAYRWQ
Ga0066667_1226749313300018433Grasslands SoilMTRRRLVRILLTLAVTGGCLGYILWQLNVRRTAHILIHSNLGWFAGAVV
Ga0184642_154942023300019279Groundwater SedimentMTRRRLVRVLLTLAVTGGCLAYILWQLNVRRTAHILVHSDLAWFAGAVLVMLAGVPPMAY
Ga0193715_103754613300019878SoilMTQKRLVRVLLTLAVTGGCLAYILWQLNVTRTAHILVHSNLGWFAGAVFVMLAGVPPMAYRWQKLLEARG
Ga0193724_103001423300020062SoilMTRKQLVRVLLTLVVTGGCLGYILWQLDVRQTVHILVHSNLAWFAGAVLVMLAGVPPMAYRW
Ga0210378_1021665023300021073Groundwater SedimentMTRKRLVRVLLTLAITGGCLGYILWQLDVRKTVHILVHSNLAWFAGAVIVMLA
Ga0210382_1026006913300021080Groundwater SedimentMTRRRLVRILLTLAVTGGCLGYILWQLNVRRTAHILIHSNLGWFA
Ga0193719_1016950813300021344SoilMTRRRLVRILLTLAVTGGCLGYILWQLNVRRTAHILIHSNLGWFAGAVVVML
Ga0222623_1021081223300022694Groundwater SedimentMTRKRLVRVLLTLAVTGGCLAYILWQLDVTRTAHILVHSNLGWFAGAVFVMLAG
Ga0193714_104188513300023058SoilMTQKRLVRVLLTLAVTGGCLAYILWQLDVTRTAHIL
Ga0207653_1004925733300025885Corn, Switchgrass And Miscanthus RhizosphereMTRKRLVRVLLTLVVTGGCLGYILWQLNVRQTVHILVHSNLAWFAGAVIVMLAGVPPMAY
Ga0207646_1179721113300025922Corn, Switchgrass And Miscanthus RhizosphereMTQKRLVRVLLTLAVTGGCLAYILWQLDVARTVHILVNSNLAWFAGAV
Ga0207664_1155256523300025929Agricultural SoilMTRKRLVRVLLTLVVTGGCLGYILWQLNVRQTVHILVHSNLAWFAGAV
Ga0207664_1177296823300025929Agricultural SoilMTRKRLVRILLTLAVTGGCLGYILWQLNVRRTAHILVNSNLGWFA
Ga0207704_1016832613300025938Miscanthus RhizosphereMTRKRLVRVLLTLVVTGGCLGYILWQLNVRQTVHILVHSNLAWFAGAVLVMLAGVPPMAYRWQ
Ga0207668_1009106113300025972Switchgrass RhizosphereMTRKRLVRVLLTLVVTGGCLGYILWQLNVRQTVHILVHANL
Ga0207640_1012675913300025981Corn RhizosphereMTRKRLVRVLLTLVVTGGCLGYILWQLNVRQTVHILVHSNLAWFAGAVLVMLAGV
Ga0209468_107702123300026306SoilMTRSRLVRVGLTLAVTAGCLTYLLWQLDVRRTLHILVNADIAWFLGAVA
Ga0209802_107848633300026328SoilMTRKVFVRVGLTLIVTGGCLAYILWQLNVRRTAHILVHSNLGWFAGAVLVMLVGVPPMAYRW
Ga0209803_106218613300026332SoilMTRKALVRVALTLIVTGGCLAYILWQLNVSRTAHILVHSNLGWFAGAVVVMLAGVPPMAYRWQKLLAARGV
Ga0209159_126667413300026343SoilMTRKVLVRVVLTLIVTGGCLAYILWQLDVRRTVHILVHSNLAWFAG
Ga0209806_113628033300026529SoilMTRRRLVRILLTLAVSGGCLAYILWQLNVRRTAHILVHSDLGWFAGAVL
Ga0209376_140016513300026540SoilVKRGLVVRLALTLAITGGCLAYILWQLDVGRTVHILVHSQLGWFLGAVAIMLGGVPPMAFRWQKLLEARGVHERL
Ga0209474_1012486133300026550SoilMTRKALVRVTLTLIVTGGCLAYILWQLNVSRTVHILVHSNLGWFAGAVIVM
Ga0209577_1004996153300026552SoilVSKKLAVRLVLTLAITGGCLAYILWQLDVGRTVHILVHSRLGWFLGAVAIMLGGVPPMAFRWQKL
Ga0207626_10370223300027465SoilMTRKVLVRVALTLIVTGGCLAYILWQLNVRRTAHILVHSNLGWFAGAVLVMLSGVP
Ga0209689_118141423300027748SoilMTRKVFVRVGLTLIVTGGCLAYILWQLNVRRTAHILVHSNLGWFAGAVLVMLVGVPPM
Ga0209180_1023938613300027846Vadose Zone SoilMTRRRLVRVLLTLAVTGGCLAYILWQLNVRRTLHILVHSNLGWFAGAVVVMLA
Ga0307313_1001109213300028715SoilMTRKRLVRVLLTLAITGGCLGYILWQLDVRKTVHILVHSNLAWFAGAVIVMLAGVPPMAYRW
Ga0307313_1021809823300028715SoilMTNRRLVRILLTLAITGACLTYILWQLDVGRTADILVHSHLGWFFGALAIMIGGVPPM
Ga0307301_1028057813300028719SoilMTQKRLVRVLLTLAVTGGCLAYILWQLNVTRTAHILVHSNLGWFAGAVFV
Ga0307318_1017621523300028744SoilMTRKQLVRVLLTLVVTGGCLGYILWQLNVRQTVHILVHSNLAWFAGAVLVMLAGVPP
Ga0307297_1036853213300028754SoilMTQKRLVRVLLTLAVTGGCLAYILWQLDVTRTAHILVHSNLAWFAGAVFVMLAGVPPMAYRWQKLL
Ga0307316_1035958423300028755SoilMTQKRLVRVLLTLAVTGGCLAYILWQLNVTRTAHILVHSNLGWFAGAVFVMLAGVPPMAF
Ga0307316_1041368113300028755SoilVKRRTAIRLGLTLAITGGCLAYILWKLDIGRTADIVVHSHLGWFFGALAIMIGGVPPMAFRWQKLLEARGVHESFAWVNRAYFVSY
Ga0307288_1003909333300028778SoilMTRRRLVRVLLTLAVTGGCLAYILWQLNVRRTAHILVHSDLAWFAGAVLVMLAGVPPMAYRWQKLLE
Ga0307282_1016525623300028784SoilMTRKQLVRVLLTLVVTGGCLGYILWQLNVRQTVHILVHSNLAWFAGAVLVMLAGVPPMAYRWQKLLEARG
Ga0307282_1046811213300028784SoilMTRKRLVRLGLTLAVTGGCLAYILWQLNVRRTAHILVHSNLGWFAGA
Ga0307282_1051456923300028784SoilMTRRRLVRILLTLAVTGGCLGYILWQLNVRRTAHILI
Ga0307504_1033059113300028792SoilMTRKRLVRVLLTLVVTGGCLGYILWQLDVRQTVHILVHSNLAWFAG
Ga0307287_1040308923300028796SoilMTQKRLVRVLLTLAVTGGCLAYILWQLDVTRTAHILVHSNLAWFAGAVFVMLAGVPPMAYRWQ
Ga0307294_1009645223300028810SoilMTRRRLVRVLLTLAVTGGCLAYILWQLNVRRTAHILVHSDLAWFAGAVLVMLAG
Ga0307292_1000003313300028811SoilMTRRRLVRVLLTLAVTGGCLAYILWQLNVRRTAHILVHSDLAWFAGAVLVMLAGVPPMAYRWQKLLDA
Ga0307314_1010989523300028872SoilMTRKRLVRVLLTLAITGGCLGYILWQLDVRKTVHILVHSNLAWF
Ga0308197_1034935313300031093SoilMTQKRLVRVLLTLAVTGGCLAYILWQLDVTRTAHILVHSNLAWFAGAVFVMLAG
Ga0307498_1005468223300031170SoilMTRKRLVRVLLTLVVTGGCLGYILWQLDVRQTVHILVHSNLAWFAGAVIVMLAGVPPM
Ga0310813_1107421213300031716SoilMTRKTLVRVALSLIVTGGCLAYILWQLDVRRTVHILVHSNPGWFAGAVLVMLVGVPPMAYRW


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.