Metagenome / Metatranscriptome Family F064978

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F064978
Family Type	Metagenome / Metatranscriptome
Number of Sequences	128
Average Sequence Length	48 residues
Representative Sequence	MSAETPPMRELHLIVGFDGSPAATRALDTSARLLAVRPPGRITVVWV
Number of Associated Samples	92
Number of Associated Scaffolds	128

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	18.75 %
% of genes near scaffold ends (potentially truncated)	97.66 %
% of genes from short scaffolds (< 2000 bps)	89.84 %
Associated GOLD sequencing projects	84
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.43

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (50.781 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (58.594 % of family members)
Environment Ontology (ENVO)	Unclassified (69.531 % of family members)
Earth Microbiome Project Ontology (EMPO)	Unclassified (53.125 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 21.33% β-sheet: 10.67% Coil/Unstructured: 68.00%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.43
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.43
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 128 Family Scaffolds
PF00120	Gln-synt_C	7.03
PF00378	ECH_1	5.47
PF01047	MarR	4.69
PF00196	GerE	3.91
PF04672	Methyltransf_19	3.12
PF13193	AMP-binding_C	3.12
PF04542	Sigma70_r2	2.34
PF00117	GATase	2.34
PF03992	ABM	2.34
PF05257	CHAP	2.34
PF00582	Usp	1.56
PF03551	PadR	1.56
PF08281	Sigma70_r4_2	1.56
PF01636	APH	0.78
PF02371	Transposase_20	0.78
PF00664	ABC_membrane	0.78
PF05988	DUF899	0.78
PF13271	DUF4062	0.78
PF03704	BTAD	0.78
PF04116	FA_hydroxylase	0.78
PF01878	EVE	0.78
PF01663	Phosphodiest	0.78
PF00171	Aldedh	0.78
PF13577	SnoaL_4	0.78
PF03061	4HBT	0.78
PF00561	Abhydrolase_1	0.78

COG ID	Name	Functional Category	% Frequency in 128 Family Scaffolds
COG0568	DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32)	Transcription [K]	2.34
COG1191	DNA-directed RNA polymerase specialized sigma subunit	Transcription [K]	2.34
COG1595	DNA-directed RNA polymerase specialized sigma subunit, sigma24 family	Transcription [K]	2.34
COG4941	Predicted RNA polymerase sigma factor, contains C-terminal TPR domain	Transcription [K]	2.34
COG1695	DNA-binding transcriptional regulator, PadR family	Transcription [K]	1.56
COG1733	DNA-binding transcriptional regulator, HxlR family	Transcription [K]	1.56
COG1846	DNA-binding transcriptional regulator, MarR family	Transcription [K]	1.56
COG0014	Gamma-glutamyl phosphate reductase	Amino acid transport and metabolism [E]	0.78
COG1012	Acyl-CoA reductase or other NAD-dependent aldehyde dehydrogenase	Lipid transport and metabolism [I]	0.78
COG1673	Predicted RNA-binding protein, contains PUA-like EVE domain	General function prediction only [R]	0.78
COG2947	Predicted RNA-binding protein, contains EVE domain	General function prediction only [R]	0.78
COG3000	Sterol desaturase/sphingolipid hydroxylase, fatty acid hydroxylase superfamily	Lipid transport and metabolism [I]	0.78
COG3547	Transposase	Mobilome: prophages, transposons [X]	0.78
COG3629	DNA-binding transcriptional regulator DnrI/AfsR/EmbR, SARP family, contains BTAD domain	Transcription [K]	0.78
COG3947	Two-component response regulator, SAPR family, consists of REC, wHTH and BTAD domains	Transcription [K]	0.78
COG4230	Delta 1-pyrroline-5-carboxylate dehydrogenase	Amino acid transport and metabolism [E]	0.78
COG4312	Predicted dithiol-disulfide oxidoreductase, DUF899 family	General function prediction only [R]	0.78

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	50.78 %
Unclassified	root	N/A	49.22 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	50.78 %
Unclassified	root	N/A	49.22 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	50.78 %
Unclassified	root	N/A	49.22 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	49.22 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	42.97 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	49.22 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	39.84 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	49.22 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	17.97 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	49.22 %
Micromonosporales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales	2.34 %
Streptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	1.56 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	1.56 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.78 %
Catenulisporales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Catenulisporales	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	49.22 %
Micromonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	2.34 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1.56 %
Thermomonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae	1.56 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.78 %
Catenulisporales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Catenulisporales	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	49.22 %
Micromonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	2.34 %
Actinomadura	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura	1.56 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1.56 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.78 %
Catenulisporales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Catenulisporales	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	49.22 %
Micromonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	2.34 %
Actinomadura graeca	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura → Actinomadura graeca	1.56 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1.56 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.78 %
Catenulisporales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Catenulisporales	0.78 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001471\|JGI12712J15308_10068739	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	896	Open in IMG/M
3300004082\|Ga0062384_100844040	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	644	Open in IMG/M
3300004082\|Ga0062384_101102207	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	573	Open in IMG/M
3300004267\|Ga0066396_10022672	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	860	Open in IMG/M
3300005332\|Ga0066388_105540138	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	639	Open in IMG/M
3300005610\|Ga0070763_10439852	Not Available	738	Open in IMG/M
3300005764\|Ga0066903_101364009	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1329	Open in IMG/M
3300006175\|Ga0070712_100403848	All Organisms → cellular organisms → Bacteria	1129	Open in IMG/M
3300006176\|Ga0070765_101319233	Not Available	680	Open in IMG/M
3300006755\|Ga0079222_10024008	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2498	Open in IMG/M
3300006893\|Ga0073928_10537528	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	833	Open in IMG/M
3300006904\|Ga0075424_100019274	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	6961	Open in IMG/M
3300006914\|Ga0075436_100618161	All Organisms → cellular organisms → Bacteria	799	Open in IMG/M
3300010358\|Ga0126370_10020305	Not Available	3807	Open in IMG/M
3300010358\|Ga0126370_10530092	Not Available	1001	Open in IMG/M
3300010361\|Ga0126378_10183998	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2157	Open in IMG/M
3300010876\|Ga0126361_10574699	Not Available	629	Open in IMG/M
3300012971\|Ga0126369_13681113	Not Available	502	Open in IMG/M
3300016270\|Ga0182036_11370128	Not Available	591	Open in IMG/M
3300016294\|Ga0182041_12320872	Not Available	502	Open in IMG/M
3300016319\|Ga0182033_10334165	Not Available	1262	Open in IMG/M
3300016319\|Ga0182033_10779468	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	841	Open in IMG/M
3300016319\|Ga0182033_11598550	Not Available	589	Open in IMG/M
3300016371\|Ga0182034_11813754	Not Available	538	Open in IMG/M
3300016387\|Ga0182040_10318495	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	1195	Open in IMG/M
3300016387\|Ga0182040_11538066	Not Available	566	Open in IMG/M
3300016404\|Ga0182037_10043783	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2942	Open in IMG/M
3300016422\|Ga0182039_10074904	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2409	Open in IMG/M
3300016445\|Ga0182038_11435872	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	619	Open in IMG/M
3300016445\|Ga0182038_11923611	Not Available	535	Open in IMG/M
3300017822\|Ga0187802_10082012	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1203	Open in IMG/M
3300017926\|Ga0187807_1051837	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura → Actinomadura graeca	1273	Open in IMG/M
3300017937\|Ga0187809_10123879	Not Available	880	Open in IMG/M
3300017961\|Ga0187778_10043248	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2753	Open in IMG/M
3300018007\|Ga0187805_10083942	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura → Actinomadura graeca	1436	Open in IMG/M
3300018058\|Ga0187766_11454448	Not Available	505	Open in IMG/M
3300020581\|Ga0210399_10457778	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1062	Open in IMG/M
3300021171\|Ga0210405_10299430	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1271	Open in IMG/M
3300021180\|Ga0210396_11457242	Not Available	564	Open in IMG/M
3300021402\|Ga0210385_11192024	Not Available	584	Open in IMG/M
3300021474\|Ga0210390_10580129	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	941	Open in IMG/M
3300021479\|Ga0210410_10611263	Not Available	967	Open in IMG/M
3300021479\|Ga0210410_10831306	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	809	Open in IMG/M
3300021560\|Ga0126371_10578039	Not Available	1272	Open in IMG/M
3300021560\|Ga0126371_12472368	All Organisms → cellular organisms → Bacteria	628	Open in IMG/M
3300027696\|Ga0208696_1006569	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	5178	Open in IMG/M
3300027855\|Ga0209693_10047306	All Organisms → cellular organisms → Bacteria	2113	Open in IMG/M
3300027874\|Ga0209465_10198722	All Organisms → cellular organisms → Bacteria	1000	Open in IMG/M
3300027879\|Ga0209169_10541928	Not Available	610	Open in IMG/M
3300028906\|Ga0308309_10302225	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1353	Open in IMG/M
3300030740\|Ga0265460_12844505	Not Available	520	Open in IMG/M
3300031543\|Ga0318516_10725120	Not Available	564	Open in IMG/M
3300031544\|Ga0318534_10353403	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	846	Open in IMG/M
3300031546\|Ga0318538_10625997	Not Available	584	Open in IMG/M
3300031564\|Ga0318573_10149822	Not Available	1223	Open in IMG/M
3300031564\|Ga0318573_10190725	Not Available	1085	Open in IMG/M
3300031573\|Ga0310915_11025265	Not Available	575	Open in IMG/M
3300031680\|Ga0318574_10120948	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1469	Open in IMG/M
3300031682\|Ga0318560_10105316	Not Available	1463	Open in IMG/M
3300031713\|Ga0318496_10231330	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1018	Open in IMG/M
3300031713\|Ga0318496_10815836	Not Available	514	Open in IMG/M
3300031724\|Ga0318500_10047409	All Organisms → cellular organisms → Bacteria	1809	Open in IMG/M
3300031724\|Ga0318500_10355577	Not Available	724	Open in IMG/M
3300031744\|Ga0306918_10037592	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3123	Open in IMG/M
3300031747\|Ga0318502_10417621	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	799	Open in IMG/M
3300031751\|Ga0318494_10098208	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1611	Open in IMG/M
3300031765\|Ga0318554_10373586	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	810	Open in IMG/M
3300031765\|Ga0318554_10461779	Not Available	719	Open in IMG/M
3300031765\|Ga0318554_10735907	Not Available	552	Open in IMG/M
3300031765\|Ga0318554_10830098	Not Available	516	Open in IMG/M
3300031769\|Ga0318526_10225433	Not Available	766	Open in IMG/M
3300031770\|Ga0318521_10167623	All Organisms → cellular organisms → Bacteria	1255	Open in IMG/M
3300031771\|Ga0318546_10306427	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	1100	Open in IMG/M
3300031771\|Ga0318546_10381223	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	983	Open in IMG/M
3300031778\|Ga0318498_10053146	All Organisms → cellular organisms → Bacteria	1801	Open in IMG/M
3300031778\|Ga0318498_10074284	All Organisms → cellular organisms → Bacteria	1529	Open in IMG/M
3300031778\|Ga0318498_10136354	Not Available	1116	Open in IMG/M
3300031781\|Ga0318547_10128556	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1474	Open in IMG/M
3300031782\|Ga0318552_10222420	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	957	Open in IMG/M
3300031782\|Ga0318552_10289538	Not Available	832	Open in IMG/M
3300031792\|Ga0318529_10013341	All Organisms → cellular organisms → Bacteria	3123	Open in IMG/M
3300031795\|Ga0318557_10252887	Not Available	807	Open in IMG/M
3300031797\|Ga0318550_10122816	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1237	Open in IMG/M
3300031798\|Ga0318523_10211139	Not Available	970	Open in IMG/M
3300031798\|Ga0318523_10547526	Not Available	571	Open in IMG/M
3300031805\|Ga0318497_10008816	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4560	Open in IMG/M
3300031805\|Ga0318497_10120074	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1422	Open in IMG/M
3300031805\|Ga0318497_10452441	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	719	Open in IMG/M
3300031819\|Ga0318568_10694474	Not Available	632	Open in IMG/M
3300031819\|Ga0318568_10998554	Not Available	517	Open in IMG/M
3300031835\|Ga0318517_10277546	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	757	Open in IMG/M
3300031845\|Ga0318511_10423589	Not Available	611	Open in IMG/M
3300031846\|Ga0318512_10094359	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1399	Open in IMG/M
3300031846\|Ga0318512_10371068	Not Available	717	Open in IMG/M
3300031846\|Ga0318512_10440936	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	657	Open in IMG/M
3300031859\|Ga0318527_10367297	Not Available	613	Open in IMG/M
3300031859\|Ga0318527_10414771	Not Available	574	Open in IMG/M
3300031890\|Ga0306925_10346504	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1595	Open in IMG/M
3300031910\|Ga0306923_11662208	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	661	Open in IMG/M
3300031912\|Ga0306921_12266393	Not Available	570	Open in IMG/M
3300031945\|Ga0310913_10340326	Not Available	1061	Open in IMG/M
3300031945\|Ga0310913_11308737	Not Available	502	Open in IMG/M
3300032001\|Ga0306922_10825659	Not Available	968	Open in IMG/M
3300032001\|Ga0306922_11839512	Not Available	595	Open in IMG/M
3300032008\|Ga0318562_10580731	Not Available	648	Open in IMG/M
3300032008\|Ga0318562_10869636	Not Available	515	Open in IMG/M
3300032009\|Ga0318563_10269405	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	920	Open in IMG/M
3300032025\|Ga0318507_10047810	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Catenulisporales	1670	Open in IMG/M
3300032025\|Ga0318507_10353253	Not Available	640	Open in IMG/M
3300032039\|Ga0318559_10270591	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	787	Open in IMG/M
3300032039\|Ga0318559_10542730	Not Available	542	Open in IMG/M
3300032052\|Ga0318506_10024712	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2239	Open in IMG/M
3300032052\|Ga0318506_10510375	Not Available	533	Open in IMG/M
3300032059\|Ga0318533_10655196	Not Available	771	Open in IMG/M
3300032059\|Ga0318533_10856466	Not Available	667	Open in IMG/M
3300032059\|Ga0318533_11219257	Not Available	550	Open in IMG/M
3300032064\|Ga0318510_10252773	Not Available	725	Open in IMG/M
3300032064\|Ga0318510_10295521	Not Available	674	Open in IMG/M
3300032065\|Ga0318513_10490137	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	601	Open in IMG/M
3300032066\|Ga0318514_10543606	Not Available	618	Open in IMG/M
3300032067\|Ga0318524_10205457	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1007	Open in IMG/M
3300032068\|Ga0318553_10525928	Not Available	620	Open in IMG/M
3300032076\|Ga0306924_10533568	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1334	Open in IMG/M
3300032094\|Ga0318540_10629609	Not Available	517	Open in IMG/M
3300032261\|Ga0306920_101070205	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1171	Open in IMG/M
3300032261\|Ga0306920_101477148	Not Available	971	Open in IMG/M
3300032261\|Ga0306920_104175191	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	521	Open in IMG/M
3300033290\|Ga0318519_10104916	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1527	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	98.44%
Host-Associated	Host-Associated	1.56%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	92.97%
Aquatic	Environmental → Aquatic	5.47%
Plants	Host-Associated → Plants	1.56%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	92.97%
Freshwater	Environmental → Aquatic → Freshwater	4.69%
Rhizosphere	Host-Associated → Plants → Rhizosphere	1.56%
Thermal Springs	Environmental → Aquatic → Thermal Springs	0.78%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	82.81%
Loam	Environmental → Terrestrial → Soil → Loam	8.59%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	4.69%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	1.56%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	1.56%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	0.78%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	75.78%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	7.81%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	6.25%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	3.12%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	1.56%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	1.56%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	1.56%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	0.78%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.78%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	0.78%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	58.59%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	17.19%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	4.69%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	3.91%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	3.12%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	3.12%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	1.56%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	1.56%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	1.56%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	0.78%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	0.78%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.78%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.78%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	0.78%
Boreal Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil	0.78%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001471	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2	Environmental	Open in IMG/M
3300004082	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3	Environmental	Open in IMG/M
3300004267	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 6 MoBio	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005610	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006893	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaG	Environmental	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300006914	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5	Host-Associated	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010876	Boreal forest soil eukaryotic communities from Alaska, USA - W5-5 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300017822	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_2	Environmental	Open in IMG/M
3300017926	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_2	Environmental	Open in IMG/M
3300017937	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_4	Environmental	Open in IMG/M
3300017961	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_20_MG	Environmental	Open in IMG/M
3300018007	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_5	Environmental	Open in IMG/M
3300018058	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_20_MG	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental	Open in IMG/M
3300021402	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-O	Environmental	Open in IMG/M
3300021474	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300027696	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_b_LC metaG (SPAdes)	Environmental	Open in IMG/M
3300027855	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3 (SPAdes)	Environmental	Open in IMG/M
3300027874	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes)	Environmental	Open in IMG/M
3300027879	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4 (SPAdes)	Environmental	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300030740	Forest Soil Metatranscriptomes Boreal Montmorency Forest, Quebec, Canada ARE Co-assembly	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031544	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f26	Environmental	Open in IMG/M
3300031546	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23	Environmental	Open in IMG/M
3300031564	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f21	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031680	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f22	Environmental	Open in IMG/M
3300031682	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f22	Environmental	Open in IMG/M
3300031713	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f22	Environmental	Open in IMG/M
3300031724	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f20	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031747	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f22	Environmental	Open in IMG/M
3300031751	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f24	Environmental	Open in IMG/M
3300031765	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f22	Environmental	Open in IMG/M
3300031769	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f24	Environmental	Open in IMG/M
3300031770	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031778	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f24	Environmental	Open in IMG/M
3300031781	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20	Environmental	Open in IMG/M
3300031782	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f20	Environmental	Open in IMG/M
3300031792	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f23	Environmental	Open in IMG/M
3300031795	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f19	Environmental	Open in IMG/M
3300031797	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f23	Environmental	Open in IMG/M
3300031798	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f19	Environmental	Open in IMG/M
3300031805	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f23	Environmental	Open in IMG/M
3300031819	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f21	Environmental	Open in IMG/M
3300031835	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f21	Environmental	Open in IMG/M
3300031845	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f18	Environmental	Open in IMG/M
3300031846	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f19	Environmental	Open in IMG/M
3300031859	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f25	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032008	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f18	Environmental	Open in IMG/M
3300032009	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f19	Environmental	Open in IMG/M
3300032025	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f20	Environmental	Open in IMG/M
3300032039	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f21	Environmental	Open in IMG/M
3300032052	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f19	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032064	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f17	Environmental	Open in IMG/M
3300032065	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f20	Environmental	Open in IMG/M
3300032066	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f18	Environmental	Open in IMG/M
3300032067	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f22	Environmental	Open in IMG/M
3300032068	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f21	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032094	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f25	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300033290	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f15	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12712J15308_100687392	3300001471	Forest Soil	MNAEAPQVRELHLVVGFDGSRPAVRALDTAARLLSVRPPGRITVV
Ga0062384_1008440401	3300004082	Bog Forest Soil	MSTPAVRELHLVVGFDGSPPANRALDTAARLLSVRPPGRITVVW
Ga0062384_1011022071	3300004082	Bog Forest Soil	MSTETPPPAEAHLVVGFDGSPAATRALDAAARLLSVRRPGRITVAWVAHL
Ga0066396_100226721	3300004267	Tropical Forest Soil	MSAETPPVRELHLIVGFDGSPAATRALDTSARLLAVRPPGRMTVVWVAHLSST
Ga0066388_1055401382	3300005332	Tropical Forest Soil	MSADTPPVRELHLIVGFDGSPAATRALDTSARLLAVRSPGRITVV*
Ga0070763_104398521	3300005610	Soil	MSTETPSAPSPVRELDLVVGFDGSPPALRALDTAARLLAVRPPGRIT
Ga0066903_1013640092	3300005764	Tropical Forest Soil	MSAETPPFHELHLIVGFDGSPAAMRALDTSARLLAVRPPGRMTVVWV
Ga0070712_1004038481	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MSAETSPIHELHLIVGFDGSPAATRALDTSARLLAVRPPGRITVVWVAHLTSTVRLSA
Ga0070765_1013192332	3300006176	Soil	MSTETPSAPSPVRELDLIVGFDGSPPALRALDTAARLLAVRPPGRITVVWVAHLGGEV
Ga0079222_100240081	3300006755	Agricultural Soil	MSAETPPVRELHLVVGFDGSSAATRALDTSARLLAVRPPGRMTVV
Ga0073928_105375281	3300006893	Iron-Sulfur Acid Spring	VGFDGSPPAVRALDTAARLLSVRPPGRITVVWVVHLTSEVQFS
Ga0075424_1000192749	3300006904	Populus Rhizosphere	MSAETPPVRELHLVVGFDGSSAATRALDTSARLLAVRPPGRMTVVWVAHLTST
Ga0075436_1006181611	3300006914	Populus Rhizosphere	MSAETPPVRELHLVVGFDGSSAATRALDTSARLLAVRPPGRMTVVWVAH
Ga0126370_100203051	3300010358	Tropical Forest Soil	MSAETPPVRELNLVVGFDGSAAARQALDTSARLLAVRPPGRITVVWVAHLGST
Ga0126370_105300921	3300010358	Tropical Forest Soil	MSAETPPIHELHLIVGFDGSPAAMRALDTSARLLAVRPPGRM
Ga0126378_101839981	3300010361	Tropical Forest Soil	MSAETPPIHELHLIVGFDGSPAAMRALDTSARLLAVRPPGRMTVVW
Ga0126361_105746991	3300010876	Boreal Forest Soil	MSTETPSAPTAVRELDLVVGFDGSPPALRALDTAARLLAVRPPGRITV
Ga0126369_136811131	3300012971	Tropical Forest Soil	MSAETPPIHELHLIVGFDGSPAALRALDTSARLLTVRPPGR*
Ga0182036_113701284	3300016270	Soil	MLLSMSAETPSVRELNLIVGYDGSPPAKRALQTSARWLSVRP
Ga0182041_123208721	3300016294	Soil	MSAETPPVRELHLIVGFDGSAAATRALDTSARLLAVRPPGRMTVVWVAH
Ga0182033_103341653	3300016319	Soil	MRELHLIVGFDGSPAATRALDTSARLLVVRPPGRMTVVWVGHLASTVRLSA
Ga0182033_107794682	3300016319	Soil	MRELHLIVGFDGSPAATRALDTSARLLAVRPPGRITVVWVAHL
Ga0182033_115985502	3300016319	Soil	MSAETPSVRELHLVIGFDGSPAATRALDAAARLLSVRPPGRITVVWVAHLSPTVELS
Ga0182034_118137541	3300016371	Soil	MSAETPPIRELHLIVGFDGSPAAARALDTSARLLAVRPPGRITVVWV
Ga0182040_103184952	3300016387	Soil	MSAETPPMRELHLIVGFDGSPAATRALDTSARLLAVRPPGRITVVWV
Ga0182040_115380662	3300016387	Soil	MSAETPPVRELHLIVGFDGSAAATRALDTSARLLAVRPPGRM
Ga0182037_100437834	3300016404	Soil	MSAETPPIRELHLIVGFDGSPAATRAVDTSARLLAVRPPGRMTVVWVA
Ga0182039_100749043	3300016422	Soil	MSAETPPFHELHLIVGFGGSPAAMRALDTSARLLAVRPPGRMTVVWVAHLTSTV
Ga0182038_114358722	3300016445	Soil	MLLCMSAETPSVRELNLIVGYDGSPPAKRALETSARWLSVRPPGRITVVWVAHLG
Ga0182038_119236111	3300016445	Soil	MSAETPPFRELHLIVGFDGSPAATRALDTSARLLAVRPPGRMTVVWV
Ga0187802_100820121	3300017822	Freshwater Sediment	MSTDAPAVPEVHLVVGFDGSPPATRALDAAVRLLAVRPGRITVLWV
Ga0187807_10518371	3300017926	Freshwater Sediment	MNTDAPAVPEVHLVVGFDGSPPATRALDAAVRLLSVRPGQITVLWVAHLTSTVEL
Ga0187809_101238793	3300017937	Freshwater Sediment	MSAETPPGRELHLIVGYDGSPPAKRALETSARLLSVRPPGRITVVWVAHLS
Ga0187778_100432486	3300017961	Tropical Peatland	MSADAPAVPEAHLVVGFDGSPPATRALDNAARLLTVRPGRITVLWVAHLASTVELS
Ga0187805_100839421	3300018007	Freshwater Sediment	MNTDAPAVPEVHLVVGFDGSPPATRALDAAVRLLSVRPGQITVLWVAHLTST
Ga0187766_114544482	3300018058	Tropical Peatland	MLLCMSADTPSVRGLNLIVGYDGSPPAKRALDTSARLLSVRPPGRITVVWVAHLG
Ga0210399_104577781	3300020581	Soil	MSAETSPIHELHLIVGFDGSPAATRALDTSARLLAVRPPGRIT
Ga0210405_102994301	3300021171	Soil	MSAESPPGRELHLVIGFDGSSAAIRALDAAARLLSVRRPGRITVVWVAHLSPAVEL
Ga0210396_114572421	3300021180	Soil	MSAETPSVSELHLIVGFDGSPPAVRALETSVRMLSVRPPGQ
Ga0210385_111920242	3300021402	Soil	MSADTPVVPEAHLVVGFDGSPPATRALDAAVRLLTVRP
Ga0210390_105801291	3300021474	Soil	MSTETPSETPAVREVDLIVGFDGSPPALRALDTAARLLVARPPGRITVVWVAHLGGE
Ga0210410_106112632	3300021479	Soil	MSTETPSAPPPVRELDLVVGFDGSPPALRALDTAARLLAVRPPGRITVVW
Ga0210410_108313061	3300021479	Soil	MSTQTPAVRELHVVVGFDGSPPALRALDTAARLLSVRPPGR
Ga0126371_105780392	3300021560	Tropical Forest Soil	MSAETPRIRELHLIVGFDGSPPATRALETSARLLAVRPPGRITVVWVAHLTS
Ga0126371_124723681	3300021560	Tropical Forest Soil	MSAETPPIHELHLIVGFDGSPAALRALDTSARLLTVRPPGRITVVWVAHLSSTVRLSADA
Ga0208696_10065699	3300027696	Peatlands Soil	MSTDAPAVPGVHLVVGFDGSPPAARALDAAVRLLMVRPGQITVLWVAHLTS
Ga0209693_100473062	3300027855	Soil	MSTETPPPPEAHLVVGFDGSPAATRALDAAARLLSVRRPGRITVAWVAHLPSTVELSAA
Ga0209465_101987221	3300027874	Tropical Forest Soil	MSAETSPVHELHLIVGFDGSPAAKRALDTSARLLAVRPPGRITVVW
Ga0209169_105419281	3300027879	Soil	MSTETPPGRELHLIVGFDGSPPAERALDAAARLLSVRPPGQ
Ga0308309_103022251	3300028906	Soil	MSTETPSAPSPVRELDLIVGFDGSPPALRALDTAARLLAVRPPGRITVVWV
Ga0265460_128445052	3300030740	Soil	MSAETPSVSELHLIVGFDGSPPAIRALETAARMLSVRPPGRI
Ga0318516_107251202	3300031543	Soil	MSAETPSVRELHLVIGFDGSPAATRALDAAARLLSVRPPGRITVVWVAHLSPTV
Ga0318534_103534031	3300031544	Soil	MSAETPPIHELHLIVGFDGSPAAKRALDASARLLAVRPPGRITVVWVAHLTSTVRLSAD
Ga0318538_106259971	3300031546	Soil	MRELHLIVGFDGSPAATRALDTSARLLVVRPPGRMTVVWVAHL
Ga0318573_101498222	3300031564	Soil	MSAETPPFRELHLIVGFDGSPAATRAVDTSARLLAIRPPGRMTVV
Ga0318573_101907251	3300031564	Soil	MSAETPSVRELHLVIGFDGSPAATRALDAAARLLSVRPPGRITVVW
Ga0310915_110252652	3300031573	Soil	VWCAKGYSWRAMSAETPRIRELHLIVGFDGSPPATRALDTSARLLAVRPPGRITVVWVA
Ga0318574_101209481	3300031680	Soil	MRELHLIVGFDGSPAATRALDTSARLLVVRPPGRT
Ga0318560_101053161	3300031682	Soil	MSAETPTVRELHLIVGFDGSPPALRALDTSARLLAVRP
Ga0318496_102313302	3300031713	Soil	MSAETPPVRGLHLIVGFDGSPAAMRALDTSARLLAVRPPGRMTVVWVAHLTSTVRLSAD
Ga0318496_108158362	3300031713	Soil	MSAETPPISELHLVVGFDGSPPATRALDTAARLLSVRPPGRIT
Ga0318500_100474092	3300031724	Soil	VWCAKGYSWRAMSAETPRIRELHLIVGFDGSPPATRALDTSARLLAVRPPGRITVVWVAH
Ga0318500_103555772	3300031724	Soil	MSAETPPFRELHLIVGFDGSPAATRAVDTSARLLAI
Ga0306918_100375921	3300031744	Soil	MSAEARSVSELHLVVGFDDSAPATRALRTAARLLEVRPPGRITVLWVAH
Ga0318502_104176211	3300031747	Soil	MSAESRSFSELHLVVGFDDSAPATRALRTAARLLEVRPPGRITVLWVAHLIP
Ga0318494_100982083	3300031751	Soil	MRELHLIVGFDGSPAATRALDTSARLLVVRPPGRMTVVWVAHLASTVR
Ga0318554_103735863	3300031765	Soil	MSAETPPIHELHLIVGFDGSPAATRALDTSARLLAVRPPGRITVVWVAHLTS
Ga0318554_104617791	3300031765	Soil	MLLSMSAETPSVRELNLIVGYDGSPPAKRALQTSARWLSVRPPGRITVVW
Ga0318554_107359071	3300031765	Soil	MSAETPPIRELHLIVGFDGSPAATRAVDTSARLLAVRPPGRMTVVWVAHLTSTVRLSAD
Ga0318554_108300982	3300031765	Soil	MLLSMSAETPSVRELNLIVGYDGSPPAKRALQTSARWLSVRPPGRITVVWV
Ga0318526_102254331	3300031769	Soil	MSAETPPFHELHLIVGFDGSPAAMRALDTSARLLAVRPPGRITVVWVAHLTSTV
Ga0318521_101676231	3300031770	Soil	MSAESRSFSELHLVVGFDDSAPATRALRTAARLLEVRPPGRITVLWVAH
Ga0318546_103064271	3300031771	Soil	MRELHLIVGFDGSPAATRALDTSARLLAVRPPGRITVVWVAHLTSTVRM
Ga0318546_103812231	3300031771	Soil	MSAETPSVRELNLIVGYDGSPPAKRALQTSARWLSVRPPGRITVVWVA
Ga0318498_100531463	3300031778	Soil	MSAETPPIRELHLIVGFDGSPAAARALDTSARLLAVRPPGRITVV
Ga0318498_100742841	3300031778	Soil	MSAETPHGRELHLIVGFDGSPPAMRALDTSARLLAVRPPGRIMVV
Ga0318498_101363542	3300031778	Soil	MRELHLIVGFDGSPAATRALDTSARLLVVRPPGRMTVVWVAHLASTVRLS
Ga0318547_101285563	3300031781	Soil	MRELHLIVGFDGSPAATRALDTSARLLVVRPPGRMTVVWVAHLASTVRL
Ga0318552_102224202	3300031782	Soil	MSAETPPVRELHLIVGFDGSAAATRALDTSARLLAVRPPGRMTVVWVAHLSSTVNLSADA
Ga0318552_102895381	3300031782	Soil	MSAETPPVRGLHLIVGFDGSPAAMRALDTSARLLAVRPPGRMTVVWVAH
Ga0318529_100133411	3300031792	Soil	MSAETPTVRELHLIVGFDGSPPALRALDTSARLLAVRPPGRITVV
Ga0318557_102528871	3300031795	Soil	MSAETPPFRELHLIVGFDGSPAATRAVDTSARLLAIRPPGRMTVVWVAHLTSTVRLSAD
Ga0318550_101228162	3300031797	Soil	MSANTPPVRELHLIVGFDGSPAAQRVLDASARLLAVRPPGRIT
Ga0318523_102111392	3300031798	Soil	MSAETPPFHELHLIVGFDGSPAAMRALDTSARLLAVRPP
Ga0318523_105475262	3300031798	Soil	MSAETPHGRELHLIVGFDGSPPAMRALDTSARLLAVRPPGRIR
Ga0318497_100088161	3300031805	Soil	MSAESRSFSELHLVVGFDDSAPATRALRTAARLLEVRPPGRITVLWVAHLSPTVELSA
Ga0318497_101200741	3300031805	Soil	MRELHLIVGFDGSPAATRALDTSARLLVVRPPGRMTVVWVA
Ga0318497_104524413	3300031805	Soil	MSAETPPIHELHLIVGFDGSPAATRALDTSARLLVVRPPGRITVVWVA
Ga0318568_106944742	3300031819	Soil	MSAETPSVRELHLVIGFDGSPAATRALDAAARLLSVRP
Ga0318568_109985542	3300031819	Soil	MSAETPPIHELHLIVGFDGSPAAMRALDTSARLLAVRPPGRMSV
Ga0318517_102775463	3300031835	Soil	MSAETPPISELHLVVGFDGSPPATRALDTAARLLSVRPPGRITVVWVA
Ga0318511_104235892	3300031845	Soil	MRELHLIVGFDGSPAATRALDTSARLLVVRPPGRMTVVWVAH
Ga0318512_100943593	3300031846	Soil	MRELHLIVGFDGSPAATRALDTSARLLVVRPPGRMTVVWLA
Ga0318512_103710682	3300031846	Soil	MLLSMSAETPSVRELNLIVGYDGSPPAKRALQTSARWLSVRPPGRIT
Ga0318512_104409361	3300031846	Soil	MSAETPSVRELNLIVGYDGSPPAKRALDTSVRWLEVRPPGRITVVW
Ga0318527_103672971	3300031859	Soil	MRELHLIVGFDGSPAATRALDTSARLLVVRPPGRMTVVWVAHLAS
Ga0318527_104147711	3300031859	Soil	MSAETPPVRELNLVIGFDGSPPATRALDTAVRMLSVRPPGRITVVWVAHLSRTVELS
Ga0306925_103465041	3300031890	Soil	MRELHLIVGFDGSPAATRALDTSARLLVVRPPGRMTVVWVAHLASTVRLSADAVEIV
Ga0306923_116622083	3300031910	Soil	MSAETPPIHELHLIVGFDGSPAATRALDTSARLLVVRPPGRITVVW
Ga0306921_122663932	3300031912	Soil	MSAETPPVRGLHLIVGFDGSPAAMRALDTSARLLAVRPPGRMTVVWVAHLTSTVRLS
Ga0310913_103403261	3300031945	Soil	MSAETPPFHELHLIVGFDGSPAAMRALDTSARLLAVRPPGRITVVWVAHLTS
Ga0310913_113087372	3300031945	Soil	MSAETPPMRELHLIVGFDGSPAATRALDTSARLLVVRPP
Ga0306922_108256591	3300032001	Soil	MSAETPPFHELHLIVGFDGSPAAMRALDTSARLLAVRPPGRMTVVWVAHLTS
Ga0306922_118395121	3300032001	Soil	MSAETPPIHELHLIVGFDGSPAATRALDTSARLLAVRPPGRITVVWVAHL
Ga0318562_105807311	3300032008	Soil	MSAETPSVRELHLVIGFDGSPAATRALDAAARLLSVRPPGRITVVWVAHLSPTADS
Ga0318562_108696363	3300032008	Soil	MSAETPSVRELNLIVGYDGSPPAKRALQTSARWLSVRPPGRITVV
Ga0318563_102694052	3300032009	Soil	MSAETPPIRELHLIVGFDGSPAAARALDTSARLLAVRPPGRITVVW
Ga0318507_100478102	3300032025	Soil	MSAETPPIRELHLIVGFDGSPAATRAVDTSARLLAVRPPGRMTVVWVAH
Ga0318507_103532531	3300032025	Soil	MSAETPPVRGLHLIVGFDGSPAAMRALDTSARLLAVRPPGRMTVVWVAHLTSTV
Ga0318559_102705911	3300032039	Soil	MSAETPSVRELNLIVGYDGSPPAKRALQTSARWLSVRPPGRITVVWVAHLGPAV
Ga0318559_105427301	3300032039	Soil	MSAETPPIRELHLIVGFDGSPAAARALDTSARLLAVRPPGRITVVWVAHLTSSVRLS
Ga0318506_100247121	3300032052	Soil	MRELHLIVGFDGSPAATRALDTSARLLVVRPPGRMTVVWVAHLAST
Ga0318506_105103751	3300032052	Soil	MSAETPPFHELHLIVGFDGSPAAMRALDTSARLLAVR
Ga0318533_106551962	3300032059	Soil	MSAETPPIRELHLIVGFDGSPAATRAVDTSARLLAVRPPGRMTV
Ga0318533_108564662	3300032059	Soil	VWCAKGYSWRAMSAETPTVRELHLIVGFDGSPPALRALDTSARLLAVRPPGRITVV
Ga0318533_112192572	3300032059	Soil	MSAETPHGRELHLIVGFDGSPPAMRALDTSARLLAVRPPGRIMVVWV
Ga0318510_102527731	3300032064	Soil	MSAETPPVRGLHLIVGFDGSPAAMRALDTSARLLAVRPPGRMTVVWVAHLT
Ga0318510_102955211	3300032064	Soil	MSAETPPFRELHLIVGFDGSPAATRAVDTSARLLAIRPPGRMTVVWVAHLTS
Ga0318513_104901372	3300032065	Soil	MSPETPPVSEARLVVGYDDSPPAQRALDAAARLLSVRPGRITVVWVAHLTGAVE
Ga0318514_105436061	3300032066	Soil	MRELHLIVGFDGSPAATRALDTSARLLVVRPPGRMTVVW
Ga0318524_102054571	3300032067	Soil	MSAETPPIHELHLIVGFDGSPAAMRALDTSARLLAVRPPGRMTVVWVAHLTS
Ga0318553_105259282	3300032068	Soil	MSAETPPVRELHLIVGFDGSAAATRALDTSARLLAVRPPGRMT
Ga0306924_105335681	3300032076	Soil	MRELHLIVGFDGSPAATRALDTSARLLVVRPPGRMTVVWVAHLASTVRLSADA
Ga0318540_106296091	3300032094	Soil	MSAETPSVRELNLIVGYDGSPPAKRALQTSARWLSVRPPGRITVVWVAH
Ga0306920_1010702051	3300032261	Soil	MSAETPPVRGLHLIVGFDGSPAAMRALDTSARLLAVRPPGRM
Ga0306920_1014771482	3300032261	Soil	MRELHLIVGFDGSPAATRALDTSARLLVVRPPGRMTV
Ga0306920_1041751911	3300032261	Soil	MSAESRSFSELHLVVGFDDSAPATRALRTAARLLEVRPPGRITVLW
Ga0318519_101049161	3300033290	Soil	MSAETPPIHELHLIVGFDGSPAATRALDTSARLLVVRPPGRITVVWVAHLTSTVRL

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F064978

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences