Metagenome / Metatranscriptome Family F064971

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F064971
Family Type	Metagenome / Metatranscriptome
Number of Sequences	128
Average Sequence Length	49 residues
Representative Sequence	ITLVKKLARKNQQCEDIEYTVRSGGTPVYTEHYHFISCLQPDGTWKIA
Number of Associated Samples	93
Number of Associated Scaffolds	128

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	0.79 %
% of genes near scaffold ends (potentially truncated)	95.31 %
% of genes from short scaffolds (< 2000 bps)	89.06 %
Associated GOLD sequencing projects	88
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.62

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Bacteria (89.844 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (48.438 % of family members)
Environment Ontology (ENVO)	Unclassified (60.938 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (46.875 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 0.00% β-sheet: 42.11% Coil/Unstructured: 57.89%
Feature Viewer

Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.62
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.62
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 128 Family Scaffolds
PF01243	Putative_PNPOx	60.94
PF13533	Biotin_lipoyl_2	7.81
PF00005	ABC_tran	3.12
PF07722	Peptidase_C26	2.34
PF00582	Usp	1.56
PF12706	Lactamase_B_2	1.56
PF01155	HypA	0.78
PF13549	ATP-grasp_5	0.78
PF12698	ABC2_membrane_3	0.78
PF00296	Bac_luciferase	0.78
PF13437	HlyD_3	0.78
PF02737	3HCDH_N	0.78
PF04185	Phosphoesterase	0.78
PF00378	ECH_1	0.78
PF16576	HlyD_D23	0.78

COG ID	Name	Functional Category	% Frequency in 128 Family Scaffolds
COG0240	Glycerol-3-phosphate dehydrogenase	Energy production and conversion [C]	0.78
COG0287	Prephenate dehydrogenase	Amino acid transport and metabolism [E]	0.78
COG0375	Hydrogenase maturation factor HypA/HybF, metallochaperone involved in Ni insertion	Posttranslational modification, protein turnover, chaperones [O]	0.78
COG0677	UDP-N-acetyl-D-mannosaminuronate dehydrogenase	Cell wall/membrane/envelope biogenesis [M]	0.78
COG1004	UDP-glucose 6-dehydrogenase	Cell wall/membrane/envelope biogenesis [M]	0.78
COG1250	3-hydroxyacyl-CoA dehydrogenase	Lipid transport and metabolism [I]	0.78
COG1748	Saccharopine dehydrogenase, NADP-dependent	Amino acid transport and metabolism [E]	0.78
COG2084	3-hydroxyisobutyrate dehydrogenase or related beta-hydroxyacid dehydrogenase	Lipid transport and metabolism [I]	0.78
COG2141	Flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase SsuD and methylene tetrahydromethanopterin reductase)	Coenzyme transport and metabolism [H]	0.78
COG3511	Phospholipase C	Cell wall/membrane/envelope biogenesis [M]	0.78

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	89.84 %
Unclassified	root	N/A	10.16 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	89.84 %
Unclassified	root	N/A	10.16 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	89.84 %
Unclassified	root	N/A	10.16 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	83.59 %
Unclassified	root	N/A	10.16 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.78 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	33.59 %
Unclassified	root	N/A	10.16 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.78 %

Name	Rank	Taxonomy	Distribution
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	17.19 %
Unclassified	root	N/A	10.16 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	2.34 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	10.16 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	2.34 %
Methylobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae	0.78 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	0.78 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	10.16 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	2.34 %
Microvirga	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga	0.78 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.78 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	10.16 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	2.34 %
Bradyrhizobium canariense	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium canariense	0.78 %
Microvirga	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga	0.78 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.78 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2070309004\|prs_FIHLEPW02RJ4FY	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	521	Open in IMG/M
3300003368\|JGI26340J50214_10188588	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	510	Open in IMG/M
3300004082\|Ga0062384_100244495	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1085	Open in IMG/M
3300004082\|Ga0062384_100886552	All Organisms → cellular organisms → Bacteria → Proteobacteria	630	Open in IMG/M
3300005332\|Ga0066388_106360812	All Organisms → cellular organisms → Bacteria → Proteobacteria	596	Open in IMG/M
3300005434\|Ga0070709_10028630	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	3324	Open in IMG/M
3300005435\|Ga0070714_100051145	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	3522	Open in IMG/M
3300005437\|Ga0070710_10540897	All Organisms → cellular organisms → Bacteria → Proteobacteria	803	Open in IMG/M
3300005439\|Ga0070711_100639797	All Organisms → cellular organisms → Bacteria → Proteobacteria	891	Open in IMG/M
3300005518\|Ga0070699_101876028	Not Available	548	Open in IMG/M
3300005598\|Ga0066706_10084891	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2257	Open in IMG/M
3300005764\|Ga0066903_108303007	All Organisms → cellular organisms → Bacteria → Proteobacteria	531	Open in IMG/M
3300006175\|Ga0070712_101028561	All Organisms → cellular organisms → Bacteria	713	Open in IMG/M
3300009090\|Ga0099827_10676877	All Organisms → cellular organisms → Bacteria → Proteobacteria	891	Open in IMG/M
3300010343\|Ga0074044_10442926	Not Available	850	Open in IMG/M
3300010343\|Ga0074044_10495077	All Organisms → cellular organisms → Bacteria → Proteobacteria	799	Open in IMG/M
3300010359\|Ga0126376_10186825	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1703	Open in IMG/M
3300010359\|Ga0126376_10397474	All Organisms → cellular organisms → Bacteria → Acidobacteria	1240	Open in IMG/M
3300010360\|Ga0126372_12236393	All Organisms → cellular organisms → Bacteria → Proteobacteria	596	Open in IMG/M
3300010361\|Ga0126378_10900473	All Organisms → cellular organisms → Bacteria	991	Open in IMG/M
3300010361\|Ga0126378_11173834	All Organisms → cellular organisms → Bacteria → Proteobacteria	866	Open in IMG/M
3300010361\|Ga0126378_13325911	All Organisms → cellular organisms → Bacteria → Proteobacteria	511	Open in IMG/M
3300010366\|Ga0126379_11907812	All Organisms → cellular organisms → Bacteria → Proteobacteria	697	Open in IMG/M
3300010366\|Ga0126379_13632409	Not Available	517	Open in IMG/M
3300010376\|Ga0126381_100688886	All Organisms → cellular organisms → Bacteria → Proteobacteria	1461	Open in IMG/M
3300010398\|Ga0126383_12646551	All Organisms → cellular organisms → Bacteria → Proteobacteria	585	Open in IMG/M
3300012202\|Ga0137363_11025061	All Organisms → cellular organisms → Bacteria → Proteobacteria	701	Open in IMG/M
3300012205\|Ga0137362_10037347	All Organisms → cellular organisms → Bacteria → Proteobacteria	3889	Open in IMG/M
3300012205\|Ga0137362_11323715	Not Available	606	Open in IMG/M
3300012208\|Ga0137376_10829537	All Organisms → cellular organisms → Bacteria → Proteobacteria	795	Open in IMG/M
3300012361\|Ga0137360_11666881	All Organisms → cellular organisms → Bacteria → Proteobacteria	543	Open in IMG/M
3300012971\|Ga0126369_10477177	All Organisms → cellular organisms → Bacteria	1301	Open in IMG/M
3300012971\|Ga0126369_11927923	All Organisms → cellular organisms → Bacteria → Proteobacteria	679	Open in IMG/M
3300016270\|Ga0182036_10002909	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	8255	Open in IMG/M
3300016270\|Ga0182036_10487198	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	975	Open in IMG/M
3300016294\|Ga0182041_10562742	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	997	Open in IMG/M
3300016319\|Ga0182033_11370985	All Organisms → cellular organisms → Bacteria → Proteobacteria	636	Open in IMG/M
3300016357\|Ga0182032_10560467	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	946	Open in IMG/M
3300016357\|Ga0182032_11256047	All Organisms → cellular organisms → Bacteria → Proteobacteria	638	Open in IMG/M
3300016357\|Ga0182032_11357534	All Organisms → cellular organisms → Bacteria → Proteobacteria	615	Open in IMG/M
3300016371\|Ga0182034_10527886	All Organisms → cellular organisms → Bacteria → Proteobacteria	988	Open in IMG/M
3300016371\|Ga0182034_10775676	All Organisms → cellular organisms → Bacteria → Proteobacteria	819	Open in IMG/M
3300016371\|Ga0182034_11459897	Not Available	599	Open in IMG/M
3300016404\|Ga0182037_10431680	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1092	Open in IMG/M
3300016404\|Ga0182037_11879080	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	536	Open in IMG/M
3300016445\|Ga0182038_12124876	All Organisms → cellular organisms → Bacteria → Proteobacteria	509	Open in IMG/M
3300020579\|Ga0210407_10787882	All Organisms → cellular organisms → Bacteria → Proteobacteria	734	Open in IMG/M
3300020581\|Ga0210399_11379280	Not Available	552	Open in IMG/M
3300020583\|Ga0210401_11459437	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	541	Open in IMG/M
3300021178\|Ga0210408_10199486	Not Available	1591	Open in IMG/M
3300021178\|Ga0210408_10364574	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1152	Open in IMG/M
3300021178\|Ga0210408_10793954	All Organisms → cellular organisms → Bacteria	742	Open in IMG/M
3300021406\|Ga0210386_10799824	Not Available	810	Open in IMG/M
3300021444\|Ga0213878_10381951	Not Available	612	Open in IMG/M
3300021444\|Ga0213878_10486489	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	542	Open in IMG/M
3300021560\|Ga0126371_10618308	All Organisms → cellular organisms → Bacteria	1232	Open in IMG/M
3300025928\|Ga0207700_11997436	All Organisms → cellular organisms → Bacteria → Proteobacteria	507	Open in IMG/M
3300027583\|Ga0209527_1002204	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3919	Open in IMG/M
3300027812\|Ga0209656_10089411	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1638	Open in IMG/M
3300029636\|Ga0222749_10361482	All Organisms → cellular organisms → Bacteria → Proteobacteria	762	Open in IMG/M
3300031446\|Ga0170820_12272599	All Organisms → cellular organisms → Bacteria → Proteobacteria	530	Open in IMG/M
3300031545\|Ga0318541_10034039	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2543	Open in IMG/M
3300031545\|Ga0318541_10433130	All Organisms → cellular organisms → Bacteria → Proteobacteria	735	Open in IMG/M
3300031564\|Ga0318573_10580639	All Organisms → cellular organisms → Bacteria → Proteobacteria	604	Open in IMG/M
3300031679\|Ga0318561_10169535	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1177	Open in IMG/M
3300031679\|Ga0318561_10789284	All Organisms → cellular organisms → Bacteria → Proteobacteria	522	Open in IMG/M
3300031680\|Ga0318574_10007867	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	4681	Open in IMG/M
3300031681\|Ga0318572_10069967	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1930	Open in IMG/M
3300031719\|Ga0306917_10567417	All Organisms → cellular organisms → Bacteria	892	Open in IMG/M
3300031723\|Ga0318493_10554503	All Organisms → cellular organisms → Bacteria → Proteobacteria	638	Open in IMG/M
3300031724\|Ga0318500_10032806	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2097	Open in IMG/M
3300031747\|Ga0318502_10200338	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1154	Open in IMG/M
3300031768\|Ga0318509_10636331	All Organisms → cellular organisms → Bacteria → Proteobacteria	593	Open in IMG/M
3300031771\|Ga0318546_10699120	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	713	Open in IMG/M
3300031778\|Ga0318498_10551772	All Organisms → cellular organisms → Bacteria → Proteobacteria	505	Open in IMG/M
3300031781\|Ga0318547_10671817	All Organisms → cellular organisms → Bacteria → Proteobacteria	643	Open in IMG/M
3300031781\|Ga0318547_10789910	All Organisms → cellular organisms → Bacteria → Proteobacteria	591	Open in IMG/M
3300031793\|Ga0318548_10408314	All Organisms → cellular organisms → Bacteria → Proteobacteria	666	Open in IMG/M
3300031794\|Ga0318503_10150589	All Organisms → cellular organisms → Bacteria → Proteobacteria	750	Open in IMG/M
3300031796\|Ga0318576_10403073	All Organisms → cellular organisms → Bacteria → Proteobacteria	646	Open in IMG/M
3300031798\|Ga0318523_10081847	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1565	Open in IMG/M
3300031799\|Ga0318565_10608687	All Organisms → cellular organisms → Bacteria → Proteobacteria	525	Open in IMG/M
3300031819\|Ga0318568_10115909	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium canariense	1617	Open in IMG/M
3300031831\|Ga0318564_10464584	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	551	Open in IMG/M
3300031833\|Ga0310917_10508449	All Organisms → cellular organisms → Bacteria → Proteobacteria	819	Open in IMG/M
3300031845\|Ga0318511_10131513	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1084	Open in IMG/M
3300031846\|Ga0318512_10497177	All Organisms → cellular organisms → Bacteria → Proteobacteria	618	Open in IMG/M
3300031879\|Ga0306919_10010651	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	5164	Open in IMG/M
3300031880\|Ga0318544_10226644	All Organisms → cellular organisms → Bacteria → Proteobacteria	722	Open in IMG/M
3300031880\|Ga0318544_10391286	All Organisms → cellular organisms → Bacteria → Proteobacteria	540	Open in IMG/M
3300031890\|Ga0306925_10743501	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1023	Open in IMG/M
3300031893\|Ga0318536_10354401	All Organisms → cellular organisms → Bacteria → Proteobacteria	743	Open in IMG/M
3300031896\|Ga0318551_10290267	All Organisms → cellular organisms → Bacteria → Proteobacteria	919	Open in IMG/M
3300031897\|Ga0318520_10789649	All Organisms → cellular organisms → Bacteria → Proteobacteria	595	Open in IMG/M
3300031941\|Ga0310912_10221324	Not Available	1451	Open in IMG/M
3300031941\|Ga0310912_10990540	All Organisms → cellular organisms → Bacteria → Proteobacteria	645	Open in IMG/M
3300031941\|Ga0310912_11063335	All Organisms → cellular organisms → Bacteria	619	Open in IMG/M
3300031945\|Ga0310913_10499023	All Organisms → cellular organisms → Bacteria → Proteobacteria	864	Open in IMG/M
3300031946\|Ga0310910_10338806	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1187	Open in IMG/M
3300031947\|Ga0310909_11223673	All Organisms → cellular organisms → Bacteria → Proteobacteria	606	Open in IMG/M
3300031947\|Ga0310909_11240894	All Organisms → cellular organisms → Bacteria → Proteobacteria	601	Open in IMG/M
3300031954\|Ga0306926_11749605	All Organisms → cellular organisms → Bacteria → Proteobacteria	707	Open in IMG/M
3300031954\|Ga0306926_12616164	All Organisms → cellular organisms → Bacteria → Proteobacteria	550	Open in IMG/M
3300032001\|Ga0306922_10528032	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1256	Open in IMG/M
3300032001\|Ga0306922_11328407	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	726	Open in IMG/M
3300032025\|Ga0318507_10001308	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	6160	Open in IMG/M
3300032035\|Ga0310911_10164187	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1254	Open in IMG/M
3300032035\|Ga0310911_10616781	All Organisms → cellular organisms → Bacteria → Proteobacteria	629	Open in IMG/M
3300032042\|Ga0318545_10155204	All Organisms → cellular organisms → Bacteria → Proteobacteria	814	Open in IMG/M
3300032042\|Ga0318545_10301125	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	576	Open in IMG/M
3300032044\|Ga0318558_10388110	All Organisms → cellular organisms → Bacteria → Proteobacteria	694	Open in IMG/M
3300032044\|Ga0318558_10513781	Not Available	598	Open in IMG/M
3300032054\|Ga0318570_10312211	All Organisms → cellular organisms → Bacteria → Proteobacteria	715	Open in IMG/M
3300032059\|Ga0318533_10624891	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	790	Open in IMG/M
3300032059\|Ga0318533_10887152	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga	654	Open in IMG/M
3300032060\|Ga0318505_10569730	All Organisms → cellular organisms → Bacteria → Proteobacteria	533	Open in IMG/M
3300032065\|Ga0318513_10635705	All Organisms → cellular organisms → Bacteria → Proteobacteria	523	Open in IMG/M
3300032068\|Ga0318553_10026881	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2727	Open in IMG/M
3300032076\|Ga0306924_11632184	All Organisms → cellular organisms → Bacteria → Proteobacteria	678	Open in IMG/M
3300032090\|Ga0318518_10364171	All Organisms → cellular organisms → Bacteria → Proteobacteria	742	Open in IMG/M
3300032261\|Ga0306920_100861009	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1327	Open in IMG/M
3300032261\|Ga0306920_101033402	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1195	Open in IMG/M
3300032261\|Ga0306920_102391684	All Organisms → cellular organisms → Bacteria → Proteobacteria	729	Open in IMG/M
3300032261\|Ga0306920_102923515	All Organisms → cellular organisms → Bacteria → Proteobacteria	647	Open in IMG/M
3300032261\|Ga0306920_103540613	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	576	Open in IMG/M
3300033289\|Ga0310914_11796931	All Organisms → cellular organisms → Bacteria → Proteobacteria	517	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	96.88%
Aquatic	Environmental → Aquatic	3.12%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	96.88%
Freshwater	Environmental → Aquatic → Freshwater	3.12%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	87.50%
Loam	Environmental → Terrestrial → Soil → Loam	7.81%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	3.12%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	1.56%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	69.53%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	16.41%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	5.47%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	3.12%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	2.34%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	1.56%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	0.78%
Tropical Rainforest	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest	0.78%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	48.44%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	20.31%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	10.16%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	4.69%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	4.69%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	3.12%
Bulk Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Bulk Soil	1.56%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	1.56%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	1.56%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.78%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.78%
Green-Waste Compost	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest → Green-Waste Compost	0.78%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.78%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.78%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2070309004	Green-waste compost microbial communities at University of California, Davis, USA, from solid state bioreactor - Luquillo Rain Forest, Puerto Rico	Environmental	Open in IMG/M
3300003368	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM2	Environmental	Open in IMG/M
3300004082	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005598	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300010343	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM1	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021406	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O	Environmental	Open in IMG/M
3300021444	Vellozia epidendroides bulk soil microbial communities from rupestrian grasslands, the National Park of Serra do Cipo, Brazil - BS_R02	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300027583	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M2 (SPAdes)	Environmental	Open in IMG/M
3300027812	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM2 (SPAdes)	Environmental	Open in IMG/M
3300029636	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031446	Fir Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031564	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f21	Environmental	Open in IMG/M
3300031679	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f23	Environmental	Open in IMG/M
3300031680	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f22	Environmental	Open in IMG/M
3300031681	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f20	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031723	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f23	Environmental	Open in IMG/M
3300031724	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f20	Environmental	Open in IMG/M
3300031747	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f22	Environmental	Open in IMG/M
3300031768	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f22	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031778	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f24	Environmental	Open in IMG/M
3300031781	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20	Environmental	Open in IMG/M
3300031793	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f21	Environmental	Open in IMG/M
3300031794	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f23	Environmental	Open in IMG/M
3300031796	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f24	Environmental	Open in IMG/M
3300031798	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f19	Environmental	Open in IMG/M
3300031799	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f21	Environmental	Open in IMG/M
3300031819	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f21	Environmental	Open in IMG/M
3300031831	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f20	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031845	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f18	Environmental	Open in IMG/M
3300031846	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f19	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031880	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f25	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031893	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f28	Environmental	Open in IMG/M
3300031896	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f19	Environmental	Open in IMG/M
3300031897	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032025	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f20	Environmental	Open in IMG/M
3300032035	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF170	Environmental	Open in IMG/M
3300032042	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f26	Environmental	Open in IMG/M
3300032044	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f20	Environmental	Open in IMG/M
3300032054	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f23	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032060	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f18	Environmental	Open in IMG/M
3300032065	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f20	Environmental	Open in IMG/M
3300032068	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f21	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032090	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f22	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
prs_07191250	2070309004	Green-Waste Compost	GTTASWSNPASGNSGFIKLGKKLHSKNQQCEEIEYTVRSGGPPVYTEHYHFTSCLQPDGAWKIA
JGI26340J50214_101885881	3300003368	Bog Forest Soil	SGNSGSIKLVKKLARKGQHANIVHTARSGGPPGYTEHYRFISCLQPDGT*
Ga0062384_1002444953	3300004082	Bog Forest Soil	SIKLVKKLTRNNQRCEDIEYTVRSGGTPVYTEHYHFVSCLQPDGTWKIA*
Ga0062384_1008865521	3300004082	Bog Forest Soil	NNQRCEDIEYTLRSGGTPVYTEHYHFISCLQPDGTWKIV*
Ga0066388_1063608121	3300005332	Tropical Forest Soil	GSIRLVKKLGRKHQECEEIEYTVRSKGPPVYTEHYHFTSCLQPDGTWKIA*
Ga0070709_100286301	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	LRPSSRNSGSVKLVKKLARKRQQCEDLEYTVRLGGPPVYTEHYRFISCLQPDGTRKIA*
Ga0070714_1000511455	3300005435	Agricultural Soil	LVKKLARKRQQCEDLEYTVRLGGPPVYTEHYRFISCLQPDGTRKIA*
Ga0070710_105408972	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	LNRKNQQCEEIEYTVRSGGPSVYTEHYHFTSCLQPDGAWKIA*
Ga0070711_1006397971	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	NSGSIRLVKKLARKGQQCEDIDYTVRSGAPVYTEHYHLTSCLQPDGTWKLA*
Ga0070699_1018760281	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	SNPASGNSGSIKLIKKLARKNQQCEELEYTVRSGGTPVYTEHYHFISCLQPDGTWKIA*
Ga0066706_100848914	3300005598	Soil	TASWSNPTSGNSGFIKLGKKLARKNQQCEEIEYTVRSGGTPVYTEHYHFTSCLQPDGTWKIA*
Ga0066903_1083030071	3300005764	Tropical Forest Soil	NPASGNSGAIKLVKKLTRKSQQCEDIEYTVRSAGPPVYTEHYHFTSCLQPDGSWKIA*
Ga0070712_1010285611	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	SIELVKKLVRNKQQCQEIAYTVRSGGPLVYTGHYHFTSCLQPDGTWKIA*
Ga0099827_106768771	3300009090	Vadose Zone Soil	TAASWSNPASGNSGFIKLGKKLARKNQQCEEIEYTVRSGGPSVYTEHYHLTSCLQPDGTWKIA*
Ga0074044_104429262	3300010343	Bog Forest Soil	GNSGSIKLVKKLTWNNQRCEDLAYTVRSGGTPIYTEHYHFTSCLQPDGTWKIA*
Ga0074044_104950773	3300010343	Bog Forest Soil	ARNNQRCEDIEYTLRSGGTPVYTEHYHFISCLQPDGTWKIV*
Ga0126376_101868251	3300010359	Tropical Forest Soil	KLVRKLIRNSQQCERIKYTMRSGGTPVYTEQYHFTSCLQPDGTWKIA*
Ga0126376_103974741	3300010359	Tropical Forest Soil	KKLALKGQKCEEIEYTARTKGPPVYTEHYHFTSCLQPDGTWKIA*
Ga0126372_122363932	3300010360	Tropical Forest Soil	WSNPASGNSGYVKLNKKVVKNGQRCEGIGYTVRSKGPPVYTEHYHFISCLQPDGAWKIA*
Ga0126378_109004731	3300010361	Tropical Forest Soil	SQNSGSIKLVKKLVRKGQQCEDIDYTVRSGAPVYTEHYHLTSCLQPDGTWKLA*
Ga0126378_111738341	3300010361	Tropical Forest Soil	IKLVRKLIRSSQQCERIKYTVRSGGTPVYIEQYHFTSCLQPDGTWKIA*
Ga0126378_133259112	3300010361	Tropical Forest Soil	KLVRKLIRNSQQCERIKYTVRSGGTPVYTEQYHFTSCLQPDGTWKIA*
Ga0126379_119078122	3300010366	Tropical Forest Soil	SGNSGSIKLVRKLIRNSQQCERIKYTVRSGGTPVYTEQYHFTSCLQSDGTWKIA*
Ga0126379_136324091	3300010366	Tropical Forest Soil	KKLALNQQQCEDIEYTARTKGPPIYTEHYQFTSCLQPDGTWKIA*
Ga0126381_1006888864	3300010376	Tropical Forest Soil	GSGNSESMTLVKKLIRRKQQCEDIQYIVRWGRTPMYTKHYDFISCLQPDGAWKLA*
Ga0126383_126465511	3300010398	Tropical Forest Soil	NPASGNSGSIKLVRKLIRNSQQCERIKYTVRSGGMPVYTEQYHFTSCLQADGTWKIA*
Ga0137363_110250611	3300012202	Vadose Zone Soil	SRLRAAGLASGSIKLVKKLARKNQQCEDIEYALRSSGTPVYTEHYHFTSCLQSDGTWKIA
Ga0137362_100373471	3300012205	Vadose Zone Soil	AGLASGSIKLVKKLARKNQQCEDIEYALRSSGTPVYTEHYHFTSCLQSDGTWKIA*
Ga0137362_113237152	3300012205	Vadose Zone Soil	LVKKLARKGQQCEDIGYTVRSGGTPAYTEHYHFISCLQPDGTWKIA*
Ga0137376_108295373	3300012208	Vadose Zone Soil	GNSGFIKLGKKLARKNQQCEEVEYTVRSGGTPVYTEHYHFTSCLQSDGTWKIA*
Ga0137360_116668811	3300012361	Vadose Zone Soil	NPASGNSGSIRLIKKLVRKTQQCEELEYIVRSGGPPIYEEHYHFTSCLQPDGIWKIA*
Ga0126369_104771771	3300012971	Tropical Forest Soil	PIATFGIKKLTRQNQQCEEIEYIANSKGPPVYTEHYHFTSCLQPDGTWRIA*
Ga0126369_119279232	3300012971	Tropical Forest Soil	NSQQCERIKYTVRSGGTPVYTEQYHFTSCLQSDGTWKIA*
Ga0182036_1000290913	3300016270	Soil	WSNPASGNSGAIKLVKKLTWKNQQCEDIEYTVRSGGTPVYTEHYHFTSCLQPDGSWKIA
Ga0182036_104871981	3300016270	Soil	IKLGKKLARKNQQCEEIEYTVRSGGTPVYTEHYHFTSCRQPDGTWKIA
Ga0182041_105627421	3300016294	Soil	RLVKKLARKNQQCEDIEYTVRSGGTPVYTEHYHFTSCLQPDGTCKIA
Ga0182033_113709852	3300016319	Soil	GNSGAIKLVKKLTWKNQQCEDIEYTVRSGGMPVYTEHYHFTSCLQPDGSWKIA
Ga0182032_105604671	3300016357	Soil	LVKKLTWKNQQCEDIEYTVRSGGTPVYTEHYHFTSCLQPDGSWKIA
Ga0182032_112560472	3300016357	Soil	GFIKLGKKLTRKNQQCEEIEYTVRSGGPSVYTEHYHFTSCLQPDGVWKIA
Ga0182032_113575342	3300016357	Soil	QCENIEYTIRSGGSPVYTEHYHFTSCLQPDGTWKIA
Ga0182034_105278863	3300016371	Soil	GNSGSIGLVKKLVRQKQQCDDIEYTVRSKGPPFYTEHYHFTSCLQPDGTWKIA
Ga0182034_107756761	3300016371	Soil	VRKLIRNSQQCERIKYTVRSGGTPVYTEQYHFTSCLQPDRSWKIA
Ga0182034_114598971	3300016371	Soil	NRQQCEEIEYTARTKGPPIYTEHYHFTSCLQPDGTWKIA
Ga0182037_104316803	3300016404	Soil	ASGNSGAIKLVKKLTWKNQQCEDIEYTVRSGGTPVYTEHYHFTSCLQPDGSWKIA
Ga0182037_118790802	3300016404	Soil	GSIKLVRKLARKNLRCEDIEYMVRSGGTPIYSEHYHFTSCLQPDGTWKIA
Ga0182038_121248761	3300016445	Soil	KKLTWKNQQCEDIEYTVRSGGTPIYTEHYHFTSCLQPDGSWKIA
Ga0210407_107878821	3300020579	Soil	QCEELEYTMRTARPEIYSEQYHFTSCLQPDGTWKIA
Ga0210399_113792801	3300020581	Soil	ALRDQQCEELEYTMRTARPEIYSEQYHFTSCLQPDGTWKIA
Ga0210401_114594372	3300020583	Soil	AGVQETRGPSKVKKLARKRQQCEDLEYTVRSGGPPVYTEHYRFISCLQPDGTRKIA
Ga0210408_101994861	3300021178	Soil	QQCEELEYTMRTARPEIYSEHYHFTSCLQPDGTWKIA
Ga0210408_103645743	3300021178	Soil	RLVKKLARKGQQCEDIDYTVRSGAPVYTEHYHLTSCLQPDGTWKLA
Ga0210408_107939542	3300021178	Soil	NQQCEELEYTVHSAGPENYPEHYHFTSCLQLDGTWKIA
Ga0210408_114341001	3300021178	Soil	YNWGSIRLVKKLALRDQQCEELEYTMRTARPEIYSEHYHFTSCLQPDGTWKIA
Ga0210386_107998241	3300021406	Soil	VRFAAACGRGRFLLRRSSRNSGSVKLVKKLARKRQQCEDLEYTVRSGGPPVYTEHYRFISCLQPDGTRKIA
Ga0213878_103819512	3300021444	Bulk Soil	CEDIGYTIRSKGPPVYTEHYYFTSCLQPDGTWKIA
Ga0213878_104864892	3300021444	Bulk Soil	KNGQQCEGIGYTVRSKGPPVYTEHYYFTSCLQPDGTWKFA
Ga0210410_105151032	3300021479	Soil	SIRLVKKLALRDQQCEELEYTMRTARPEIYSEHYHFTSCLQPDGTWKIA
Ga0126371_106183081	3300021560	Tropical Forest Soil	NSGTIKLLRKLVLNGQQCEEIRYLARTKGPPIYTEHYHFTSCLQPDGTWKIA
Ga0207700_119974362	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	HNSGSIRLVKKLVHKGQQCEDIDYTVRSGAPVYTEHYHLTSCLQPDRTWKLA
Ga0209527_10022041	3300027583	Forest Soil	LVKKLALRDQQCEELEYTVHSVGPENYPEHYHFTSCLQLDGTWKIA
Ga0209656_100894111	3300027812	Bog Forest Soil	CEDIGYTVRSSGPPGYTEHYHFISCLQPDGTWKIA
Ga0222749_103614821	3300029636	Soil	ASWSNPASGNSGSIKLGTKLVRKTRQCEGIEYTVRSGGTPVYTEHYHLTSCLQPDGTWKI
Ga0170820_122725992	3300031446	Forest Soil	LVKKLTRKNQKCEEIEYTVRSGGPPVYTEHYHFTSCLQPDGAWKIA
Ga0318541_100340394	3300031545	Soil	KNQQCEEIEYTVRSGGPPVYTEHYHFTSCLQPDGAWKIA
Ga0318541_104331302	3300031545	Soil	RIKNQQCEKIEYTAQSKGPPVYTEHYHFTSCLQPHGTWRIA
Ga0318573_105806392	3300031564	Soil	GSIRLVKKLARKNQQCEDIEYTVRSGGTPVYTEHYHFISCLQPDGTWKIA
Ga0318561_101695351	3300031679	Soil	GSVKLVKKLRRKNQQCEDIEYMVRSGGSPVYSEHYHFISCLQPDGTWKIA
Ga0318561_107892842	3300031679	Soil	IKLIKKLARSNQRCEDIAYTVRSGGTPVYTEHYHFISCLQPDGTWKIA
Ga0318574_100078671	3300031680	Soil	QQCEEIEYTVRSGGPPAYTEHYHFTSCLQPDGAWKIA
Ga0318572_100699671	3300031681	Soil	NSGSLKLVKKLVLKNQRCEEVEYTVRSGGSPPYSEHYHLTSCLQPDGTWKIA
Ga0306917_105674173	3300031719	Soil	IRLVKKLVRKGQQCEDIGYTVRSGAPVYTEHYHLTSCLQPDGTWKLA
Ga0318493_105545032	3300031723	Soil	KKLTRKNTQCEDILYTVRSGGPPVYTEHYHFISCLQPDGTWKIA
Ga0318500_100328061	3300031724	Soil	CEEIEYTVRSGGPPVYTEHYHFTSCLQPDGAWKIA
Ga0318502_102003381	3300031747	Soil	GKKLTRKNQQCEKIEYTVRSGGPPVYTEHYHFTSCLQPDGAWKIA
Ga0318509_106363311	3300031768	Soil	SENSGFIKLGKKLTRKNQQCEEIEYTVRSGGPPVYTEHYHFTSCLQPDGAWKIA
Ga0318546_106991201	3300031771	Soil	NPASGNSGSVKLVKKLRRKNQQCEDIEYMVRSGGSPVYSEHYHFISCLQPDGTWKIA
Ga0318498_105517722	3300031778	Soil	CERIKYTVRSGGTPVYTEQYHFTSCLQPDRSWKIA
Ga0318547_106718172	3300031781	Soil	ASWSNPASGNSGFIKLGKKLTRKNQQCEEIEYTVRSGGPPVYTEHYHFTSCLQPDGAWKI
Ga0318547_107899102	3300031781	Soil	RNSQQCERIKYTVRSGGTPVYTEQYHFTSCLQPDRSWKIA
Ga0318548_104083142	3300031793	Soil	SWINPASQNSGSIGLVKKLVRKGRQCEDIDYTLRSGAPVYTEHYHLTSCPQPDGTPKLA
Ga0318503_101505892	3300031794	Soil	NQQCEEIEYLVRSGGTPVYTEHYHFTSCLQLDGTWKIA
Ga0318576_104030731	3300031796	Soil	NQQCEEIEYTVRSGGPSVYTEHYHFTSCLQPDGVWKIA
Ga0318523_100818471	3300031798	Soil	GTTASWSNPASGNSGFIKLGKKLTRKNQQCEEIEYTVRSGGPPVYTEHYHFTSCLQPDGAWKIA
Ga0318565_106086872	3300031799	Soil	QCEKIEYTVRSGGPPVYTEHYHFTSCLQPDGAWKIA
Ga0318568_101159093	3300031819	Soil	VKLVKRLRRKNQQCEDIEYMVRSGGSPVYSEHYHFISCLQPDGTWKIA
Ga0318564_104645841	3300031831	Soil	RKNQQCEDIEYMVRSGGSPVYSEHYHFISCLQPDGTWKIA
Ga0310917_105084493	3300031833	Soil	QQCERIKYTVRSGGTPVYTEQYHFTSCLQPDRSWKIA
Ga0318511_101315133	3300031845	Soil	NPASGNSGFIKLGKKLTRKNQQCEEIEYTVRSGGPPVYTEHYHFTSCLQPDGAWKIA
Ga0318512_104971772	3300031846	Soil	SGNSGFIKLGKKLTRKNQQCEEIEYTVRSGGPSVYTEHYHFTSCLQPDGVWKIA
Ga0306919_100106516	3300031879	Soil	TTASWSNPASGNSGLIKLGKKLARQNQQCEEIEYLVRSGGTPVYTEHYHFTSCLQLDGTWKIA
Ga0318544_102266442	3300031880	Soil	LGKKLARQNQQCEEIEYLVRSGGTPVYTEHYHFTSCLQLDGTWKIA
Ga0318544_103912861	3300031880	Soil	NKKLLKNGQRCEGIGYTVRSKGPPVYTQHYHFISCLQPDGAWKIA
Ga0306925_107435013	3300031890	Soil	NSGSIRLVKKLVRKGQQCEDIGYTVRSGAPVYTEHYHLTSCLQPDGTWKLA
Ga0318536_103544011	3300031893	Soil	NSQQCEQIKYTVRSGGTPVYTEQYHFTSCLQPDRSWKIA
Ga0318551_102902671	3300031896	Soil	VGTTVDWSNPASKNSGSIKLVKKLTRKNTQCEDILYTVRSGGPPVYTEHYHFISCLQPDGTWKIA
Ga0318520_107896491	3300031897	Soil	SGNSGFIKLGKKLTRKNQQCEEIEYTVRSGGPPAYTEHYHFTSCLQPDGAWKIA
Ga0310912_102213243	3300031941	Soil	VLNRQQCEEIEYTARTKGPPIYTEHYHFTSCLQPDGTWKIA
Ga0310912_109905402	3300031941	Soil	NVHGKPLGTMAFWSNPASGNSGFVKLDKRLSRKNQQCENIEYTIRSGGSPVYTEHYHFTSCLQPDGTWKIA
Ga0310912_110633351	3300031941	Soil	PHCEDIEYLVRSGGTPVYTEHYHFISCLQPDGAWKIA
Ga0310913_104990231	3300031945	Soil	TNSASQNSGSIRLAKKLVRDGQQCEDIDYTVRSGPPVYTEHYHLTSCLQPTGLGSSPKRG
Ga0310910_103388061	3300031946	Soil	KNQQCEDIEYTVRSGGTPVYTEHYHFTSCLQPDGTCKIA
Ga0310909_112236732	3300031947	Soil	FIKLGKKLTRKNQQCEEIEYTVRSGGPPAYTEHYHFTSCLQPDGAWKIA
Ga0310909_112408942	3300031947	Soil	KLGKKLTRKNQQCEKIEYTVRSGGPPVYTEHYHFTSCLQPDGAWKIA
Ga0306926_117496051	3300031954	Soil	WSNPASGNSGSIGLVKKLVRQKQQCDDIEYTVRSKGPPFYTEHYHFTSCLQPDGTWKIA
Ga0306926_126161641	3300031954	Soil	GNSGYVKLNKKVVKNGQRCEGIGYTVRSKGPPVYTEHYHFISCLQSDGAWKIA
Ga0306922_105280321	3300032001	Soil	PASGNSGAIKLVKKLTWKNQQCEDIEYTVRSGGTPVYTEHYHFTSCLQPDGSWKIA
Ga0306922_113284071	3300032001	Soil	RKNQQCEDIEYTVRSGGTPVYTEHYHFTSCLQPDGTCKIA
Ga0318507_100013086	3300032025	Soil	IKLGKKLTRKNQQCEKIEYTVRSGGPPVYTEHYHFTSCLQPDGAWKIA
Ga0310911_101641873	3300032035	Soil	KLARKNQQCEEIEYTVRSGGTPVYTEHYHFTSCRQPDGTWKIA
Ga0310911_106167811	3300032035	Soil	TNPASGNSGSIKLVRKLIRNSQQCERIKYTVRSGGTPVYTEQYHFTSCLQPDRSWKIA
Ga0318545_101552042	3300032042	Soil	NPASGNSGFIKLGKKLTRKNQQCEEIEYTVRSGGPSVYTEHYHFTSCLQPDGVWKIA
Ga0318545_103011251	3300032042	Soil	GTTASWSNPASGNSGFIKLGKKLTRKNQQCEEIEYTVRSGGPPAYTEHYHFTSCLQPDGAWKIA
Ga0318558_103881102	3300032044	Soil	LARQNQQCEEIEYLVRSGGTPVYTEHYHFTSCLQLDGTWKIA
Ga0318558_105137811	3300032044	Soil	SWSNPASGNSGSIKLVKKLVLNRQQCEEIEYTARTKGPPIYTEHYHFTSCLQPDGTWKIA
Ga0318570_103122111	3300032054	Soil	KKLARQNQQCEEIEYLVRSGGTPVYTEHYHFTSCLQLDGTWKIA
Ga0318533_106248913	3300032059	Soil	IRLVKKLARKNQQCEDIEYTVRSGGTPVYTEHYHFTSCLQPDGTCKIA
Ga0318533_108871521	3300032059	Soil	VKLNKKVVQNGQRCEGIGYTVRSKGPPVYTEHYHFISCLQSDGAWKIA
Ga0318505_105697302	3300032060	Soil	SWTNPASGNSGSIRLVKKLARKNQQCEDIEYTVRSGGTPVYTEHYHFISCLQPDGTWKIA
Ga0318513_106357052	3300032065	Soil	GKPVGTTVDWSNPASKNSGSIKLVKKLTRKNTQCEDILYTVRSGGPPVYTGHYHFISCPQPDGTWKIA
Ga0318553_100268816	3300032068	Soil	TKATWTNSVSGNSGSIKLVRKLIRNSQQCERIKYTVRSGGTPVYIEQYYFISCLQPDGTWKIA
Ga0306924_116321842	3300032076	Soil	IKNQQCEKIEYTAQSKGPPVYTEHYHFTSCLQPHGTWRIA
Ga0318518_103641712	3300032090	Soil	ITLVKKLARKNQQCEDIEYTVRSGGTPVYTEHYHFISCLQPDGTWKIA
Ga0306920_1008610091	3300032261	Soil	LTWKNQQCEDIEYTVRSGGTPVYTEHYHFTSCLQPDGSWKIA
Ga0306920_1010334023	3300032261	Soil	VKLNKQVVKNGQRCEGIGYTVRSKGPPVYTEHYHFISCLQPDGTWKIA
Ga0306920_1023916842	3300032261	Soil	RKNQQCEEIEYTVRSGGPPVYTEHYHFTSCLQPDGAWKIA
Ga0306920_1029235152	3300032261	Soil	ASGNSGSIKLVRKLIRNSQQCERIKYTVRSGGTPVYTEQYHFMSCLQADGTWKIA
Ga0306920_1035406132	3300032261	Soil	KPVETRVTWSNAASGNSGYVKLNKKLVKNGQQCESIGYTVRSKGPPVYTEHYHFTSCLQPDGSWKIA
Ga0310914_117969312	3300033289	Soil	GNSGSIKLIKRIGQKSQQCEDIEYTVRSGGTPAYTEHYHFTSCLQPDGTWKIA

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F064971

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences