Metagenome / Metatranscriptome Family F064954

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F064954
Family Type	Metagenome / Metatranscriptome
Number of Sequences	128
Average Sequence Length	109 residues
Representative Sequence	MITEAERRFPVRIRLAIPTGGLGERLNQMQTWLDQNAGADGWAMTPSGARGVVNDAIAIYLADATIASAFVARWCAGHRAEAADGLFRVREDEPAPRIGAKPHKTP
Number of Associated Samples	81
Number of Associated Scaffolds	128

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	48.44 %
% of genes near scaffold ends (potentially truncated)	41.41 %
% of genes from short scaffolds (< 2000 bps)	85.16 %
Associated GOLD sequencing projects	73
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.35

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (96.094 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (32.031 % of family members)
Environment Ontology (ENVO)	Unclassified (31.250 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (57.031 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 23.13% β-sheet: 11.94% Coil/Unstructured: 64.93%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.35
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.35
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 128 Family Scaffolds
PF07369	DUF1488	13.28
PF02586	SRAP	3.12
PF13561	adh_short_C2	2.34
PF07452	CHRD	2.34
PF01381	HTH_3	2.34
PF00072	Response_reg	1.56
PF02397	Bac_transf	1.56
PF13463	HTH_27	1.56
PF07769	PsiF_repeat	1.56
PF07883	Cupin_2	1.56
PF00106	adh_short	0.78
PF13519	VWA_2	0.78
PF13432	TPR_16	0.78
PF08281	Sigma70_r4_2	0.78
PF01471	PG_binding_1	0.78
PF00589	Phage_integrase	0.78
PF01862	PvlArgDC	0.78
PF00291	PALP	0.78
PF07508	Recombinase	0.78
PF00724	Oxidored_FMN	0.78
PF00565	SNase	0.78
PF04317	DUF463	0.78

COG ID	Name	Functional Category	% Frequency in 128 Family Scaffolds
COG2135	ssDNA abasic site-binding protein YedK/HMCES, SRAP family	Replication, recombination and repair [L]	3.12
COG2148	Sugar transferase involved in LPS biosynthesis (colanic, teichoic acid)	Cell wall/membrane/envelope biogenesis [M]	1.56
COG0042	tRNA-dihydrouridine synthase	Translation, ribosomal structure and biogenesis [J]	0.78
COG1902	2,4-dienoyl-CoA reductase or related NADH-dependent reductase, Old Yellow Enzyme (OYE) family	Energy production and conversion [C]	0.78
COG1945	Pyruvoyl-dependent arginine decarboxylase	Amino acid transport and metabolism [E]	0.78
COG1961	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	Replication, recombination and repair [L]	0.78
COG3106	Ras-like GTP-binding stress-induced protein YcjX, DUF463 family	Signal transduction mechanisms [T]	0.78

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	96.09 %
Unclassified	root	N/A	3.91 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	96.09 %
Unclassified	root	N/A	3.91 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	96.09 %
Unclassified	root	N/A	3.91 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	91.41 %
Unclassified	root	N/A	3.91 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	0.78 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	89.06 %
Unclassified	root	N/A	3.91 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	0.78 %

Name	Rank	Taxonomy	Distribution
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	69.53 %
Unclassified	root	N/A	3.91 %
Rhodobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales	2.34 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	1.56 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1.56 %
Planctomycetia	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	0.78 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	69.53 %
Unclassified	root	N/A	3.91 %
Roseobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae	2.34 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1.56 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	1.56 %
Isosphaerales	order	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Isosphaerales	0.78 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	69.53 %
Unclassified	root	N/A	3.91 %
Loktanella	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Loktanella	1.56 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1.56 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	1.56 %
Isosphaeraceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Isosphaerales → Isosphaeraceae	0.78 %
Jannaschia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Jannaschia	0.78 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	69.53 %
Unclassified	root	N/A	3.91 %
Loktanella fryxellensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Loktanella → Loktanella fryxellensis	1.56 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	1.56 %
unclassified Jannaschia	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Jannaschia → unclassified Jannaschia	0.78 %
Bradyrhizobium valentinum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium valentinum	0.78 %
Singulisphaera	genus	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Isosphaerales → Isosphaeraceae → Singulisphaera	0.78 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	69.53 %
Unclassified	root	N/A	3.91 %
Loktanella fryxellensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Loktanella → Loktanella fryxellensis	1.56 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	1.56 %
Jannaschia sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Jannaschia → unclassified Jannaschia → Jannaschia sp.	0.78 %
Singulisphaera acidiphila	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Isosphaerales → Isosphaeraceae → Singulisphaera → Singulisphaera acidiphila	0.78 %
Bradyrhizobium valentinum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium valentinum	0.78 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2170459019\|G14TP7Y02JIEDT	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	574	Open in IMG/M
3300001593\|JGI12635J15846_10169174	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1478	Open in IMG/M
3300001661\|JGI12053J15887_10118393	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1418	Open in IMG/M
3300001661\|JGI12053J15887_10250718	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	880	Open in IMG/M
3300001661\|JGI12053J15887_10289531	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	803	Open in IMG/M
3300001661\|JGI12053J15887_10398737	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	661	Open in IMG/M
3300001661\|JGI12053J15887_10618182	Not Available	515	Open in IMG/M
3300002245\|JGIcombinedJ26739_100126546	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2409	Open in IMG/M
3300002245\|JGIcombinedJ26739_100584645	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	994	Open in IMG/M
3300005176\|Ga0066679_10221037	Not Available	1213	Open in IMG/M
3300005176\|Ga0066679_10869356	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	570	Open in IMG/M
3300005179\|Ga0066684_10852439	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	598	Open in IMG/M
3300005435\|Ga0070714_100576599	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1079	Open in IMG/M
3300005435\|Ga0070714_102505221	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	501	Open in IMG/M
3300005436\|Ga0070713_100482213	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1168	Open in IMG/M
3300005436\|Ga0070713_102134358	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	543	Open in IMG/M
3300005445\|Ga0070708_101673497	All Organisms → cellular organisms → Bacteria	592	Open in IMG/M
3300005451\|Ga0066681_10383806	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	864	Open in IMG/M
3300005451\|Ga0066681_10451671	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	789	Open in IMG/M
3300005454\|Ga0066687_10899746	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Jannaschia → unclassified Jannaschia → Jannaschia sp.	527	Open in IMG/M
3300005467\|Ga0070706_100055970	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3640	Open in IMG/M
3300005467\|Ga0070706_100268110	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1593	Open in IMG/M
3300005467\|Ga0070706_100447815	All Organisms → cellular organisms → Bacteria	1202	Open in IMG/M
3300005467\|Ga0070706_100994049	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	774	Open in IMG/M
3300005467\|Ga0070706_101938626	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	534	Open in IMG/M
3300005468\|Ga0070707_100020701	All Organisms → cellular organisms → Bacteria → Proteobacteria	6208	Open in IMG/M
3300005471\|Ga0070698_100694008	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	960	Open in IMG/M
3300005471\|Ga0070698_100884520	All Organisms → cellular organisms → Bacteria → Proteobacteria	839	Open in IMG/M
3300005471\|Ga0070698_101100817	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	743	Open in IMG/M
3300005518\|Ga0070699_100136077	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2167	Open in IMG/M
3300005518\|Ga0070699_100385595	All Organisms → cellular organisms → Bacteria	1266	Open in IMG/M
3300005518\|Ga0070699_102176474	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	506	Open in IMG/M
3300005536\|Ga0070697_101055431	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	723	Open in IMG/M
3300005560\|Ga0066670_10696532	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	616	Open in IMG/M
3300005561\|Ga0066699_10187281	Not Available	1435	Open in IMG/M
3300005576\|Ga0066708_10234406	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1162	Open in IMG/M
3300006028\|Ga0070717_11810494	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	552	Open in IMG/M
3300006032\|Ga0066696_10678540	Not Available	663	Open in IMG/M
3300006046\|Ga0066652_101750529	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	564	Open in IMG/M
3300006175\|Ga0070712_101981688	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Loktanella → Loktanella fryxellensis	510	Open in IMG/M
3300006796\|Ga0066665_11447212	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	534	Open in IMG/M
3300006804\|Ga0079221_10171131	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1160	Open in IMG/M
3300006806\|Ga0079220_10694231	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	746	Open in IMG/M
3300006806\|Ga0079220_11530757	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	574	Open in IMG/M
3300006903\|Ga0075426_11338382	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	544	Open in IMG/M
3300006903\|Ga0075426_11461892	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Loktanella → Loktanella fryxellensis	519	Open in IMG/M
3300006904\|Ga0075424_101141241	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	830	Open in IMG/M
3300006914\|Ga0075436_100626382	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	794	Open in IMG/M
3300006914\|Ga0075436_101103137	All Organisms → cellular organisms → Bacteria → Proteobacteria	597	Open in IMG/M
3300007788\|Ga0099795_10421519	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	610	Open in IMG/M
3300007788\|Ga0099795_10456944	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	589	Open in IMG/M
3300009038\|Ga0099829_11252907	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	614	Open in IMG/M
3300009088\|Ga0099830_10477140	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1015	Open in IMG/M
3300009137\|Ga0066709_100213903	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium valentinum	2546	Open in IMG/M
3300009137\|Ga0066709_102107585	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	779	Open in IMG/M
3300009143\|Ga0099792_10079320	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1676	Open in IMG/M
3300009143\|Ga0099792_10303051	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	949	Open in IMG/M
3300010396\|Ga0134126_10556350	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1316	Open in IMG/M
3300010396\|Ga0134126_10684473	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1167	Open in IMG/M
3300011269\|Ga0137392_10193753	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1660	Open in IMG/M
3300011270\|Ga0137391_10033060	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	4349	Open in IMG/M
3300011270\|Ga0137391_10760395	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	801	Open in IMG/M
3300011271\|Ga0137393_10319394	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1324	Open in IMG/M
3300011271\|Ga0137393_10694795	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	871	Open in IMG/M
3300012096\|Ga0137389_11642744	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	539	Open in IMG/M
3300012189\|Ga0137388_10212991	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1746	Open in IMG/M
3300012189\|Ga0137388_10885302	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	826	Open in IMG/M
3300012198\|Ga0137364_11465000	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	503	Open in IMG/M
3300012200\|Ga0137382_10486630	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	876	Open in IMG/M
3300012202\|Ga0137363_10241640	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1465	Open in IMG/M
3300012204\|Ga0137374_10224654	All Organisms → cellular organisms → Bacteria	1596	Open in IMG/M
3300012208\|Ga0137376_10149528	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2008	Open in IMG/M
3300012361\|Ga0137360_10612434	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	932	Open in IMG/M
3300012363\|Ga0137390_10020880	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	6072	Open in IMG/M
3300012363\|Ga0137390_10084717	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	3119	Open in IMG/M
3300012363\|Ga0137390_10584649	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1085	Open in IMG/M
3300012363\|Ga0137390_10659842	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1010	Open in IMG/M
3300012582\|Ga0137358_10437450	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	883	Open in IMG/M
3300012582\|Ga0137358_10886205	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	586	Open in IMG/M
3300012683\|Ga0137398_10466153	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	866	Open in IMG/M
3300012917\|Ga0137395_10382494	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1006	Open in IMG/M
3300012917\|Ga0137395_11262984	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	513	Open in IMG/M
3300012918\|Ga0137396_10035153	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	3347	Open in IMG/M
3300012918\|Ga0137396_10252106	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1302	Open in IMG/M
3300012922\|Ga0137394_10329682	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1303	Open in IMG/M
3300012925\|Ga0137419_10432315	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1034	Open in IMG/M
3300012927\|Ga0137416_10537982	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1010	Open in IMG/M
3300014497\|Ga0182008_10428715	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	715	Open in IMG/M
3300015241\|Ga0137418_10045441	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	4045	Open in IMG/M
3300015241\|Ga0137418_10693428	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	782	Open in IMG/M
3300015242\|Ga0137412_10038992	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Isosphaerales → Isosphaeraceae → Singulisphaera → Singulisphaera acidiphila	3881	Open in IMG/M
3300018433\|Ga0066667_11729627	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	563	Open in IMG/M
3300018433\|Ga0066667_12281179	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	506	Open in IMG/M
3300018482\|Ga0066669_10441466	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1115	Open in IMG/M
3300018482\|Ga0066669_12381040	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	507	Open in IMG/M
3300019888\|Ga0193751_1150296	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	836	Open in IMG/M
3300020199\|Ga0179592_10147273	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1077	Open in IMG/M
3300021178\|Ga0210408_11232794	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	570	Open in IMG/M
3300021478\|Ga0210402_10844652	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	842	Open in IMG/M
3300025910\|Ga0207684_10075466	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2865	Open in IMG/M
3300025922\|Ga0207646_10106322	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2517	Open in IMG/M
3300025928\|Ga0207700_10372196	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1248	Open in IMG/M
3300025928\|Ga0207700_10926627	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	780	Open in IMG/M
3300025929\|Ga0207664_11808298	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	533	Open in IMG/M
3300025929\|Ga0207664_11873809	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	522	Open in IMG/M
3300027381\|Ga0208983_1011196	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1706	Open in IMG/M
3300027383\|Ga0209213_1012229	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1568	Open in IMG/M
3300027546\|Ga0208984_1019281	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1372	Open in IMG/M
3300027546\|Ga0208984_1066631	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	774	Open in IMG/M
3300027616\|Ga0209106_1037247	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1080	Open in IMG/M
3300027633\|Ga0208988_1032817	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1338	Open in IMG/M
3300027663\|Ga0208990_1050204	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1254	Open in IMG/M
3300027663\|Ga0208990_1051774	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1229	Open in IMG/M
3300027663\|Ga0208990_1052759	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1215	Open in IMG/M
3300027663\|Ga0208990_1055799	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1171	Open in IMG/M
3300027663\|Ga0208990_1075809	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	963	Open in IMG/M
3300027669\|Ga0208981_1008187	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2639	Open in IMG/M
3300027681\|Ga0208991_1005204	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	3869	Open in IMG/M
3300027681\|Ga0208991_1129748	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	749	Open in IMG/M
3300027889\|Ga0209380_10442629	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	760	Open in IMG/M
3300027903\|Ga0209488_10083013	All Organisms → cellular organisms → Bacteria	2386	Open in IMG/M
3300027903\|Ga0209488_10162297	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1687	Open in IMG/M
3300028047\|Ga0209526_10096031	Not Available	2086	Open in IMG/M
3300028047\|Ga0209526_10254710	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1200	Open in IMG/M
3300028047\|Ga0209526_10262602	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1178	Open in IMG/M
3300028536\|Ga0137415_10069589	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	3383	Open in IMG/M
3300030991\|Ga0073994_10025987	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	816	Open in IMG/M
3300032205\|Ga0307472_101401635	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	678	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	94.53%
Host-Associated	Host-Associated	4.69%
Engineered	Engineered	0.78%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	94.53%
Plants	Host-Associated → Plants	4.69%
Solid Waste	Engineered → Solid Waste	0.78%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	94.53%
Rhizosphere	Host-Associated → Plants → Rhizosphere	4.69%
Grass	Engineered → Solid Waste → Grass	0.78%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	53.91%
Loam	Environmental → Terrestrial → Soil → Loam	40.62%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	4.69%
Composting	Engineered → Solid Waste → Grass → Composting	0.78%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	34.38%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	20.31%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	20.31%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	14.06%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	4.69%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	3.12%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	2.34%
Unclassified	Engineered → Solid Waste → Grass → Composting → Unclassified	0.78%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	32.03%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	19.53%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	17.19%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	9.38%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	4.69%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	3.91%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	3.12%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	2.34%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	2.34%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.56%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.78%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.78%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	0.78%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.78%
Switchgrass, Maize And Mischanthus Litter	Engineered → Solid Waste → Grass → Composting → Unclassified → Switchgrass, Maize And Mischanthus Litter	0.78%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2170459019	Litter degradation MG4	Engineered	Open in IMG/M
3300001593	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2	Environmental	Open in IMG/M
3300001661	Mediterranean Blodgett CA OM1_O3 (Mediterranean Blodgett coassembly)	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300005176	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128	Environmental	Open in IMG/M
3300005179	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005451	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130	Environmental	Open in IMG/M
3300005454	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_136	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005560	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_119	Environmental	Open in IMG/M
3300005561	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148	Environmental	Open in IMG/M
3300005576	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006032	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145	Environmental	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300006804	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200	Environmental	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300006903	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300006914	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5	Host-Associated	Open in IMG/M
3300007788	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012204	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300012683	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaG	Environmental	Open in IMG/M
3300012917	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG	Environmental	Open in IMG/M
3300012918	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300014497	Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG	Host-Associated	Open in IMG/M
3300015241	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015242	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300019888	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1c2	Environmental	Open in IMG/M
3300020199	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025929	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300027381	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA Ref_M2 (SPAdes)	Environmental	Open in IMG/M
3300027383	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM1_M2 (SPAdes)	Environmental	Open in IMG/M
3300027546	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM3_M3 (SPAdes)	Environmental	Open in IMG/M
3300027616	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM1_M3 (SPAdes)	Environmental	Open in IMG/M
3300027633	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA Ref_M1 (SPAdes)	Environmental	Open in IMG/M
3300027663	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA Ref_M3 (SPAdes)	Environmental	Open in IMG/M
3300027669	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM1_M1 (SPAdes)	Environmental	Open in IMG/M
3300027681	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM3_M2 (SPAdes)	Environmental	Open in IMG/M
3300027889	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6 (SPAdes)	Environmental	Open in IMG/M
3300027903	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)	Environmental	Open in IMG/M
3300028047	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300028536	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300030991	Metatranscriptome of forest soil microbial communities from Montana, USA - Site 5 -Soil GP-1A (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
4MG_03059410	2170459019	Switchgrass, Maize And Mischanthus Litter	MIDDAERRFPVRIRVALPIGGLGERLNEIHHWLDQNGGADGWSTTPSGTRGIPNDAMAIYFADATIASAFVARWCAGHRAASLDGLFQMREGEPKKRVPLKDHKTP
JGI12635J15846_101691743	3300001593	Forest Soil	MAASSRLMIAEAERRFPVRIRIAVPMGGFGERLNQMQSWLDQNAGADGWAMTPSGVRGVVNDAVAIHFADVAIAGAFVARWCRAQRVEIADGLYRVREDEPARRIGAAHHKTP*
JGI12053J15887_101183932	3300001661	Forest Soil	MIIEAERRFPVRIRLAIPTGGLGERLNQMQTWLDQNAGADGWAMTPSGARGVVNDAIAIYLGDATIASAFVARWCAGHRAEAADGLFRVREDGPAPRIGASHHKTPP*
JGI12053J15887_102507181	3300001661	Forest Soil	MITEAERRFPVRIRLAIPTGGLGERLNQMQTWLDQNAGADGWAMTPSGARGVVNDAIAIYLADATIASAFVARWCAGHRAEAADGLFRVRE
JGI12053J15887_102895312	3300001661	Forest Soil	MAASSRLMITEADRRFPLRIRLAIPAGGFSERLNHMHAWLDQNAGADGWAMTPSGIRTVVNDAVAVYFADAAMASAFVARWCAGHKAEAADGLFRVREDEPAPRI
JGI12053J15887_103987372	3300001661	Forest Soil	MITEAERRFPVRIRLAIPTGGLGERLNQMYAWLDQSAGADGWAMTPSGMREIVNDSIAVYLADATIASAFVARWCAGHKAESMCGLFRVREDE
JGI12053J15887_106181822	3300001661	Forest Soil	MAASSRLMITEADRRFPLRIRLAIPAGGFGERLNHMHAWLDQNAGADGRAMTPSGIRTVVNDAVAVYFADAAMASAFVARWCAGHKAEAADGLFRVREDEPAPRI
JGIcombinedJ26739_1001265465	3300002245	Forest Soil	MAASSRLMIAEAERRFPVRIRIAVPMGGFGERLNQMQSWLDQNAGADGWAMTPSGVRGVVNDAVAIHFADVAITGAFVARWCQAQRVEIADGLYRVREDEPARRIGAAHHKTP*
JGIcombinedJ26739_1005846452	3300002245	Forest Soil	MAASSRLMITEAERRFPLRIRLAIPAGGFGERLDHMHAWLDQNAGADGWAMTPSGVRGVVNDAIAVYFSDATIASSFVARWCVGHKAKSMDGLFRVREDEPQRRMQLPAHKSPL*
Ga0066679_102210372	3300005176	Soil	KRNTMAASSRLMIAEAERRFPVRIRIAVPVGGFGERVNRMQSWLDQNAEADGWAITPSGIRGVVNDAVAVHFADVVIAGAFVARWCKVQRVEIADGLYRMRDDEPAPRIGAAHHKTL*
Ga0066679_108693561	3300005176	Soil	MRAAQRTARDAERRFPVRIRIAVPDLGLGERLNQMQEWLDQTAGADGWAMTPSGVRGVLNDAISVYLGDATIASAFVARWCIGHRAEATDGLFRIRDDEPTPRIGAA
Ga0066684_108524392	3300005179	Soil	MRAAESAARETERRFPVRIRIGVPNTGLGERLNQMQHWLDQNAGADGWAWTPSGDRGVLNDAISIHLMDATIASALVARWCIGHRAEAADGLFRIREDEPKARVRAADHKTP*
Ga0070714_1005765992	3300005435	Agricultural Soil	MRAAQIGARDTERRFPVRIRIAVPPAGLGKQLTQMPDWFDHNAGADAWAMTPSGERGVLNDALSIHLADAMMASAFVARWCIGHRAEASDGVYRLREDEPKRRVRAPDHKTP*
Ga0070714_1025052212	3300005435	Agricultural Soil	MPGRSRLIIDEADRRFPVRIRVALPIGGLGERLNEIHHWLDQNGGADGWSITPSGTRGIPNDAMAIYFADATIASAFVVRWCAGHRAASLNGLFQIREDEPKKRVPLKDHKTP*
Ga0070713_1004822132	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MRAAQIATRYNERRFPVRIRIGVPPTGLGKQLTQMQDWLDHNAGADGWAMTPSGERRVHDALSIHFADAIIASAFLVRWCIGYRAEAVDGLYRIREDEPKPRVRAPHHKTP*
Ga0070713_1021343581	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	RIAVPPAGLGKQLTQMQDWLEHNAGADGWAMTPSGEQGVLNDALSIHFADATIAIAFVVRWCIGHRAEAADGVYRIREDEPKPRVRAPDHKTP*
Ga0070708_1016734972	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MAASSQLMVTEADRRFPVRIRVAVPPEGFGVRLTAMHEWLDQNAGADGWAMTPRGTRGIVNDAVAVYFADATIASAFVARWCAGHRVESADGLFRIRDDGPALRKGAAHHKMPL*
Ga0066681_103838062	3300005451	Soil	RIRIGVPPTGLGKQLTQMQDWLDHNAGADGWGMTPSGERGVLNDALSIHFADATIASAFVARWCIGHRAEASGGVYRIRQDEPKPRVRAPDHKTP*
Ga0066681_104516712	3300005451	Soil	MRAAESAGREIERRFPVRIRIAVPVTGLGTRLTQMHEWLDQNAGADGWATTPSGERGVLNDALSIHLMDATIASAFVARWCIGHRAEAADGLFRIREDEPTRRVRAKDHKTP*
Ga0066687_108997461	3300005454	Soil	PVRVRIAVPATGLGTRLTQMHEWLDQNAGADGWATTPSGERGVLNDALSIHLADATIASAFVARWCIGYRPETADGLFRIREDEPKPRVKAPDHKTP*
Ga0070706_1000559707	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MAASSKLMVSEAERRFPVRIRIAVPTGGFGVCLTAIHEWLDQNAGADGWARTPSGARGVVNDAIAIYLADATIASAFVARWCAGHKAEAADGLFRVREDVPTPRIAIRPHKTP*
Ga0070706_1002681102	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MAASSKLMVAEAERRFPVRIRLALPTGGFGTRLTAIHEWLDPNAGADGWAMTPSGTRGVVNDAVAVYFADATIAAGFVARWCAGHRAETHNGLFEMRDDEPTLRRPARDHKSL*
Ga0070706_1004478153	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MAGSSRLMVAEAERRFPVRIRMVLPAGGFGTRLPAIHDWLDQNAGVDGWAMTPSGTRGPVNDAIAVYFADATIAAGFVARWCAGHRAEAADGLFRVREDEPTPRTGTADHSVPIRQPVGGRGVDGA*
Ga0070706_1009940491	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	IVADGDECRARIGWRESSDRDERMAASSKLMVAEAERRFPVRIRVAAPPEGFGVRLTAMHEWLDQNAGADGWAMTPSGTRGIVNDAVAVYFADATIANAFVARWCAGHRVESADGLFRVREDEPKHRTGTAAHSAPLGRPPGGRG*
Ga0070706_1019386262	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MAASSRLMIGEAERRFPVRIRVALPTGGFGVRLTAMHDWLDETAGADGWAMTPSGVRGPVNDAVAVYFADATVAAGFVARWCAGHRAETVDGVFRVREDEPT
Ga0070707_10002070110	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	MRAAQRAAREIERRFPVRIRIAVPGQGLGRRLTQMQDWLDQNAGADGWAWTPSGGRGIANDAVSIHLADATIASAFVARWCIGHRAEAADGVFLIREDEPKPRIRAADHKTP*
Ga0070698_1006940082	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	VAVPPEGFGVRLTAMHEWLDQNAGADGWAMTPSGARGVVNDAIAIYFADATIASAFVARWCAGHKAEAADGLFRVREDEPTPRIGASHHKAPL*
Ga0070698_1008845202	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	MIGEAERRFPVRIRLALPADGFGVRLTAIHEWLDQNAGADGWAMTPSGTRGVVNDAVAVYFADATIAAGFVARWCAGHRAEAQDGLFRVRDDEPAPRVTARSHKAPL*
Ga0070698_1011008172	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	MAASSRLMVTEAERRFPVRIRLALPARGFGTRLTAIHEWLDRNAGADGWVMTPSGVRGPVNDAVAVYFADATIAAGFVARWCAGHRAESRDGLFRVREDEPAPRVGVAHHKSPP*
Ga0070699_1001360772	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	VRIRVAVPPEGFGVRLTAMHEWLDQNAGADGWAMTPSGARGVVNDAIAIYFADATIASAFVARWCAGHKAEAADGLFRVREDEPTPRIGASHHKAPL*
Ga0070699_1003855954	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	MAASSKLMVAEAEWRFPVRIRVAAPPEGFGVRLTAMHEWLDQNAGADGWAMTPSGTRGIVNDAVAVYFADATIANAFVARWCAGHRVESADGLFRVRED
Ga0070699_1021764741	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	MAASSRLMISEAERRFPVRIRLALPADGFGVRLTAIHEWLDQNAGADGWAMTPSGTRGVVNDAVAVYFADATIAAGFVARWCAGHRAEAQDGLFRVRDD
Ga0070697_1010554312	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	MRAAQQAARDTERRFPVRIRLALPAGGFGTRLTAIYEWLDQNAGADGWAMTPSGVRGPVNDAVAVYFADATIAAGFVARWCAGHRAEAADGLFRAREDVPTPRIAIRPHKTP*
Ga0066670_106965322	3300005560	Soil	MVARTRMMIAEAERRFPVRIRIAADQGLGTRLNQMHHWLDQNAGADGLAMTPSGARGVVNDAAAIYFADATIASAFVARWCAGHRAEAADGLFRVREDQPTLRIPAAHHKSPPD*
Ga0066699_101872812	3300005561	Soil	MRVDIGFLADWTHGPVHENLARHERKRNTMAASSRLMIAEAERRFPVRIRIAVPVGGFGERVNRMQSWLDQNAEADGWAITPSGIRGVVNDAVAVHFADVVIAGAFVARWCKVQRVEIADGLYRMRDDEPAPRIGAAHHKTL*
Ga0066708_102344061	3300005576	Soil	VRIAVPPTGLGKQLTRMQDWLDHNAGADGWAMTPSGERGVLNDAISIHLADATIASAFVARWCIGYRAEAVDGLYRIREDEPKPRVRAPDHKTP*
Ga0070717_118104942	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	APVPVRIRIAVPAGGLGDRLNRIQEWLDQNAGTDGWAMTASGLRRVVNDAISMHLADATIASAFAARWCVGHRAESTDGLFRVREDEPTRRVGLSPH*
Ga0066696_106785402	3300006032	Soil	MAASSRLMIAEAERRFAVRIKIAVPVGGFGQRLTNIHEWLDQTAGADDWAIVPAGFRGVVNDAVAIYFADVTIAGAFVARWCRARRVEIVDGLFQVRDDEPTKRVGATAHSSPPPWR*
Ga0066652_1017505292	3300006046	Soil	MAARSRLMITEAERRFPVRIRIAADQGLGARLDQMHQWLDQNAGADGWAMTPSGTRGVVNDAAAIYFADAAIASAFVARWCAGHKPDIAGGAFMV
Ga0070712_1019816881	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	LPECRRLNSAGGQSVSCRAVKMPGRSRLIIDEAERRFPMRIRVAQPIGGLGARLNEIQHWLDQNGGADGWSTTPSGTRGIPNDAMAIYFADATIASAFVARWCAGHRAAPLDGFFQMREDEPKKRVPLKDHKTP*
Ga0066665_114472121	3300006796	Soil	VRLRVAVPVGGFGERLNQMQSWLDQNAGADGWAMTPSGIRGVVNDAVAVHFDDVAIASAFVARWCQAQRVEIVDGLYRVREDEPSPRIAAAHHKTP*
Ga0079221_101711311	3300006804	Agricultural Soil	RGRSRLMIDEAERRFPVRIRVALPIGGLGERLNEIHHWLDQNGGADGWSITPSGTRGIPNDAMAIYFADATIASAFVVRWCGGHRAASLDGLFQMREDEPKKRVPLTDHKTP*
Ga0079220_106942312	3300006806	Agricultural Soil	KMRGRSRLMIDEAERRFPVRIRLALPIGGLGERLNEIHHWLDQNGAADGWSITPSGTRGIPNDAMAIYFADTTIASAFSARWCAGHRAAPLDGLFQMREDEPKRRVPLKDHKTP*
Ga0079220_115307571	3300006806	Agricultural Soil	MIDEAELRFPVRLRVALPIGGLGERLNEIHHWLDQNGGADGWSITPSGTRGIPNDAMAIYFADATIASAFVARWCAGHRAASLDGLLQIREDEPKKRVPLKDHKTP*
Ga0075426_113383822	3300006903	Populus Rhizosphere	MIDEAERRFPVRIRVALPIGGLGERLNEIHHWLDQNGGADGWSIRPSGTRGIPNDAMAIYFADATIASAFVARWCAGHRAASLDGLFQIREDEPKKRVPLKAHKTP*
Ga0075426_114618921	3300006903	Populus Rhizosphere	RAAQIATRYNERRFPVRIRIGVPPTGLGKQLTQMQDWLDHNAGADGWAMTPSGERRVHDALSIHFADAIIASAFLVRWCIGYRAEAVDGLYRIREDEPKPRVRAPHHKTP*
Ga0075424_1011412412	3300006904	Populus Rhizosphere	MRAAQIATRYNERRFPVRIRIGVPPTGLGKQLTQMQDWHDHNAGADGWAMTPSGERRVHDALSIHFADAIIASAFLVRWCIGYRAEAVDGLYRIREDEPKP
Ga0075436_1006263821	3300006914	Populus Rhizosphere	ERHRKSEGSQFFRSGAVKMRGRSRLMIDEAERRFPVRIRVALPIGGLGERLNEIHHWLDQNGGADGWSIRPSGTRGIPNDAMAIYFADATIASAFVARWCAGHRAASLDGLFQIREDEPKKRVPLKAHKTP*
Ga0075436_1011031372	3300006914	Populus Rhizosphere	LLHRDAWAGRVMRAAQIATRYNERRFPVRIRIGVPPTGLGKQLTQMQDWLDHNAGADGWAMTPSGERRVHDALSIHFADAIIASAFLVRWCIGYRAEAVDGLYRIREDEPKPRVRAPHHKTP*
Ga0099795_104215191	3300007788	Vadose Zone Soil	MAASSRLMINEAERRFPVRIRLAVPAVGLGERLDHIYAWLDQNAGADGWAMTPWGIRTVVDDAIAVYFAEAPIASAFVARWCAGSKAETMNGLFRIRDDEPASRPPAAPPQVPTVKEPLRLNGERR*
Ga0099795_104569441	3300007788	Vadose Zone Soil	KFMITEAERRFPIRVRLAIPVGGLGERLNQMHAQNAGADGWAMSPSGARGVVNDAIAIYLADATTASAFVARWCAGHRAETADGLFRVREDEPAPRIGAKPHKTP*
Ga0099829_112529072	3300009038	Vadose Zone Soil	KRNTMAASSRLMIAEAERRFPVRIRIAVPAGGFGERLNQMQNWLDQNAGADGWAMTPSGIRGVVNDAVAVHFADVVIASAFVARWCRAQRVEIVDGSYRVRDDEPVPRIGAAHHKTP*
Ga0099830_104771403	3300009088	Vadose Zone Soil	MRAAQQAARDAERRFPVRIRIAVPDRGLGERLSHIQQWLDENAGADGWALAPSGIRGIANDALSIYLTDATVASAFVARWCVGHRAESADGLFLIRDDEPTPRIAAAHHKTP*
Ga0066709_1002139031	3300009137	Grasslands Soil	MAASSRLMIAEAERRFPVRIRIAVPASGLGERLNQMQEWLDQNAGANGWAMTPSGTRSIVNDATAVYLADATIASAFVARWCAGQRAEASDGLFRVREDDPAPRRVARHHKTPP*
Ga0066709_1021075851	3300009137	Grasslands Soil	VPAGGLGERLNRMQLWLDHNAGADGRAMAPSGNRGVVNDATAVYFADATIASAFVARWCAGYRAGSLDGLFRMRQDEPKQRVIAPDHKAPLPERR*
Ga0099792_100793202	3300009143	Vadose Zone Soil	MAASSRLMINEAERRFPVRIRLAVPAVGLGERLDHIYAWLDQNAGADGWAMTPCGIRTVVDDAIAVYFAEAPIASAFVARWCAGSKAETMNGLFRIRDDEPASRPPAAPPQVPTVKEPLRLNGERR*
Ga0099792_103030512	3300009143	Vadose Zone Soil	MITEAERRFPVRIRIAADQGLGARLNQMHDWLDQNAGADGWAMTPSGARGVVNDAIAIYLADATIASAFVARWCAGHRAEAADGLFRVREDQPTPRTVASHHKTPP*
Ga0134126_105563502	3300010396	Terrestrial Soil	MVDEAERRFPVRIRVALPIGGLGERLNEIHNWLDQNAGADGWSITPSGTRGIPNDAMAIYFADATIASAFVARWCAGHRAASLDGLFQIREDEPKKRVPLKDHKTP*
Ga0134126_106844732	3300010396	Terrestrial Soil	MIDEAERRFPVRIRVAPPTGGLGERLNEIHHWLDQNGGADGWSITPSGTRGIPNDAIAIYFADATIASAFVARWCAGHRAASLDGLFQIREDEPKKRVPLKDHKTP*
Ga0137392_101937531	3300011269	Vadose Zone Soil	MAASSRLIIAEAERRFPVRIRLALPVGGFGERVNQMQSWLDQNAGADGWAMTPSGVRGVVNDAVAIHFADVAIASAFVARWCRAQRVEIADGSYRVRDDEPVPRIGAAHHKTP*
Ga0137391_100330604	3300011270	Vadose Zone Soil	MRAAQQAARDAERRFPVRIRIAVPDRGLGDRLNQFQEWLDQNAGADGWAWTPSGIRGIANDALSIYLADATIASTFVARWCLGHNATSTDGVFCIREDAPTPRIGAAHHKTP*
Ga0137391_107603951	3300011270	Vadose Zone Soil	GANLSGWTRGPVRENLARHERKRNTMAASSRLMIAEAERRFPVRIRIAVPAGGFGERLNQMQNWLDQNAGADGWAMTPSGIRGVVNDAVAVHFADAAIASAFVARWCRAQRVEIVDGLYRVRDDEPMPRIGAAHHKTP*
Ga0137393_103193941	3300011271	Vadose Zone Soil	MAASSRLIIAEAERRFPVRIRLALPVGGFGERVNQMQSWLDQNAGADGWAMTPSGVRGVVNDAVAIHFADVAIASAFVARWCRAQRVEIADGSYRVRDDEPVPRIGAAHHKT
Ga0137393_106947951	3300011271	Vadose Zone Soil	RDAERRFPVRIRIAVPDRGLGERLSHIQQWLDENAGADGWALAPSGIRGIANDALSIYLTDATVASAFVARWCVGHRAESADGLFLIRDDEPTPRIAAAHHKTP*
Ga0137389_116427442	3300012096	Vadose Zone Soil	MAASSRLMIAEAERRFPVRIRIAVPAGGFGERLNQMQNWLDQNAGADGWAMTLSGIRGVVNDAVAVHFADAAIASAFVARWCRAQRVEIVDGLYRVRDDEPMPRIGAAHHKTP*
Ga0137388_102129915	3300012189	Vadose Zone Soil	MRAAQQAARDAERRFPVRIRIAVPDRGLGERLSHIQQWLDENAGADGWALAPSGIRGIANDALSIYLADATIASTFVARWCLGHNATSTDGVFCIREDAPTPRIGAAHHKTP*
Ga0137388_108853021	3300012189	Vadose Zone Soil	MAASSRLMIAEAERRFPVRIRIAVPAGGFGERLNQMQNWLDQNAGADGWAMTPSGIRGVVNDAVAVHFADAAIASAFVARWCRAQRVEIVDGLYRVRDDEPMPRIGAAHHKTP*
Ga0137364_114650002	3300012198	Vadose Zone Soil	MKAAQSAARETERRFPVRIRIAVPDRGLGERLNQMQLWFDQNAGADGWAWTPSGDRGVLNDAISIHLADATIASAFVARWCRAQRVEIVDGLFRVRDDEPTK
Ga0137382_104866301	3300012200	Vadose Zone Soil	MITEAERRFPVRIRIAADQGLGARLDQMHQWLDQNAGADGWAMTPSGARGVVNDAIAVYFADAAIASAFVARWCAGQKAEVAEGLLRIRDDEPTPRIGAAHHSSPPRSSG*
Ga0137363_102416403	3300012202	Vadose Zone Soil	MIIEAERRFPVRIRLALPTGGLGERLDQMQTWLDQNAGTDGWAMTPSGIRTVINDVVAVYFADATIASAFVARWCAGHRAEAADGLFRVRENQPTPRTVASHHKTPP*
Ga0137374_102246541	3300012204	Vadose Zone Soil	MRAARQAVRDAERRFPVRIRIAVPDRGLGDRLNQIHHWLDQNAGADGWTWTPSGAHGVLNDAISIHLADATIASAFVARWCQAQRVEIVDGLYRVRDDEPASRIGAAHHKTP*
Ga0137376_101495282	3300012208	Vadose Zone Soil	MKAAQSAARETERRFPVRIRIAVPDRGLGERLNQMQLWFDQNAGADGWAWTPSGDRGVLNDAISIHLADATIASAFVARWCRAQRVEIVDGLFRVRDDEPTKRVGATAHASPP*
Ga0137360_106124343	3300012361	Vadose Zone Soil	MIIEAERRFPVRIRLALPTGGLGERLDQMQTWLDQNAGTDGWAMTPSGIRTVINDVVAVYFADATIASAFVARWCAGHRAEAADGLFRVREDQPTPR
Ga0137390_100208801	3300012363	Vadose Zone Soil	MAASSRLMIAEAERRFPVRIRIAVPAGGFGERLNQMQNWLDQNAGADGWAMTPSGIRGVVNDAVAVHFADVVIASAFVARWCRAQRVEIVDGLYRVREDEPAPRIGAAHHKTP*
Ga0137390_100847171	3300012363	Vadose Zone Soil	ASSRLMIAEAERRFPVRIRIAVPAGGFGERLNQIQNWLDQNAGADGWAMTPSGIRGVVNDAVAVHFADAAIASAFVARWCRAQRVEIVDGLYRVRDDEPMPRIGAAHHKTP*
Ga0137390_105846491	3300012363	Vadose Zone Soil	MRAAQRAARDADRRFPVRIRIAVPDRGLGERINQIQDWLDQNAGADGWAWTPSGIRGIANDALPIYLADATIASAFVARCIGHRAEATDGLFRIRDDEPTPRMGAAHHKTP*
Ga0137390_106598421	3300012363	Vadose Zone Soil	RAAQQAARDAERRFPVRIRIAVPDRGLGERLSHIQQWLDENAGADGWALAPSGIRGIANDALSIYLTDATVASAFVARWCVGHRAESADGLFLIRDDEPTPRIAAAHHKTP*
Ga0137358_104374501	3300012582	Vadose Zone Soil	SSKFMIIEAERRFPVRIRLALPTGGLGERLDQMQTWLDQNAGTDGWAMTPSGIRTVIDDVVAVYFADATIASAFVARWCAGHRAEAADGLFRVREDQPTPRTVASHHKTPP*
Ga0137358_108862051	3300012582	Vadose Zone Soil	MIADADRRFPVRIRLAIPAGGLGVRLNQMQTWLDQNAGAAGWATTPSGIRTIINDVVAVYLADATIASAFVARWCAGHRAEAADGLFRVRDDEPTPRTV
Ga0137398_104661532	3300012683	Vadose Zone Soil	MIIEAERRFPVRIRLALPTGGLGERLNQMQTWLDQNAGTDGWAMTPSGARGVVNDAIAIYLADATIASAFVARWCAGRRAETIDGLFRVREDEPAPRIGAKPHKTP*
Ga0137395_103824942	3300012917	Vadose Zone Soil	MAASSKLMITEAERRFPVRIRLAIPTGGLGERLNQMYAWLDQSAGADGWAMTPSGMREIVNDSIAVYLADATIASAFVARWCAGHKAESMCGLFRVREDEPKPRIGAMPHKTP*
Ga0137395_112629841	3300012917	Vadose Zone Soil	MITEAERRFPVRIRIAADQGLGARLNQMHDWLDQNAGADGWAMTPSGARGVVNYAIAIYLADATIASAFVARWCAGHRAEAADGLFRVREDEPT
Ga0137396_100351536	3300012918	Vadose Zone Soil	MIIEAERRFPVRIRLALPTGGLGERLNQMQTWLDQNAGADGWAMTPSGARGVVNDAIAIYLADATIASAFVARWCAGHKAEAADGLFRVREDEPAPRIGAKPHKTP*
Ga0137396_102521062	3300012918	Vadose Zone Soil	MAASSRLMINEAERRFPVRIRLAVPAVGLGERLDHIYAWLDQNAGADGWAMTPWGIRTVVDDAIAVYFAEAPIASAFVARWCAGSKAETMNGLFRIRDDEPASRPPAAHH*
Ga0137394_103296824	3300012922	Vadose Zone Soil	MIIEAERRFPVRIRLALPTGGLGERLNQMQTWLDQNAGADGWAMTPSGARGVVNDAIAIYLADATIASAFVARWCAGHRAEAADGLFRVREDEPTPRTVASHHKTPP*
Ga0137419_104323154	3300012925	Vadose Zone Soil	MRAALQAARNAERRFPVRFRIAIPDRGLGDRLNQMHEWLDQNAGADGWAMTPSGVRGVLNDAISVCLGDATIASAFVARWCIGHRAEATDGLFRIRDDEPTPRIGAAHHKTP*
Ga0137416_105379822	3300012927	Vadose Zone Soil	MITEAERRFPVRIRLALPTGGLGERLDQMQTWLDQNAGTDGWAMTPSGARGVVNDAIAIYLADATIASAFVARWCAGHRAETVDGLFRVREDEPAPRIGASHHKTPP*
Ga0182008_104287152	3300014497	Rhizosphere	MRAAQIAARDTERRFPVRIRIAVPPAGLGKQLTQMQDWLEHNAGADGWAMTPSGEQGVLNDALSIHFADATIAIAFVVRWCIGHRAEAADGVYRIREDEPKPRVRAPDHKTP*
Ga0137418_100454417	3300015241	Vadose Zone Soil	MIIEAERRFPVRIRLALPTGGLGERLDQMQTWLDQNAGTDGWAMTPSGIRTVINDVVAVYFADATIASAFVARWCAGHRAEAADGLFRVREDQPTPRTVASHHKTPP*
Ga0137418_106934281	3300015241	Vadose Zone Soil	AERRFPVRFRIAIPDRGLGDRLNQMHEWLDQNAGADGWAMTPSGVRGVLNDAISVCLGDATIASAFVARWCIGHRAEATDGLFRIRDDEPTPRIGAAHHKTP*
Ga0137412_100389922	3300015242	Vadose Zone Soil	MITEAERRFPVRIRIAADQGLGARLNQMHDWLDQNAGADGWAMTPSGARGVVNDAIAIYLADATIASAFVARWCAGHRAETADGLFRVREDEPAPRVGAKPHKTP*
Ga0066667_117296271	3300018433	Grasslands Soil	MRAAQSAGRETERRFPVRIRIAVPNSGLGERLNQMQEWLDQNAGADGWAMTPSGERGLLNDALSIHFADATIASGFVARWCIGHRAEAVDGLYRIREDEPKPRVRAPDHKTP
Ga0066667_122811792	3300018433	Grasslands Soil	GLGERLNQMHEWLDQNAGSDGWAMTPSGVRGMLNDPTSIFFADATIASAFVARWCRGHKAGAVDGLLWIRDDEPVPRVGAVHHKTP
Ga0066669_104414661	3300018482	Grasslands Soil	MAARSRLMITEAEQRFPVRIRIAADHGLGARLDQMHRWLDQNAGADGWAMTPSGARGVVNDAIALYFADAAIASAFVARWCAGHKAEVAKGLLRIRDGEPTPRIGAAHHTSPPRAGGGEA
Ga0066669_123810401	3300018482	Grasslands Soil	MVARSRLMIAEAERRFPVRIRIAADRGLGARLDQMHQWLDQNAGADGWAMTPSGARGVVNDAAAIYFADATIASAFVARWCAGHSTEVAQGLFRVREDEPTLRDPAAHRK
Ga0193751_11502961	3300019888	Soil	MAASSRLMITEAERRFPLRIRLAIPAGGFGERLDHMHAWLDQNAGADGWAMTPSGVRGVVNDAIAVYFSDATIASSFVARWCVGHKAESMDGLFRVREDEPQRRMQLPAHKS
Ga0179592_101472732	3300020199	Vadose Zone Soil	MIIEAERRFPVRIRLALPTGGLGERLDQMQTWLDQNAGTDGWAMTPSGIRTVINDVVAVYFADATIASAFVARWCAGHRAEAADGLFRVREDQPTPRTVASHHKTPP
Ga0210408_112327941	3300021178	Soil	TEAERRFPVRIRPAIPAGGLGEWLNQMQVWLDQSAGADGWAMTPSGMRGVVNDAIAIYLADATIASAFVARWCAGHKAQSTDRLFRIREDEPTPRIGAKPHKTP
Ga0210402_108446522	3300021478	Soil	MIAEAERRFPVRIGIAVAPRGLGERFNQMHEWPDQNAGADGWAMTPSGARGVVNDAIAIYLADATIASAFVARWCAGHKAEAADGLFRVRDDEPAPRIGASHHKAPL
Ga0207684_100754665	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MAASSKLMVAEAERRFPVRIRLALPTGGFGTRLTAIHEWLDPNAGADGWAMTPSGTRGVVNDAVAVYFADATIAAGFVARWCAGHRAETHNGLFEMRDDEPTLRRPARDHKSL
Ga0207646_101063222	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	MRAAQRAAREIERRFPVRIRIAVPGQGLGRRLTQMQDWLDQNAGADGWAWTPSGGRGIANDAVSIHLADATIASAFVARWCIGHRAEAADGVFLIREDEPKPRIRAADHKTP
Ga0207700_103721962	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	MRAAQIGARDTERRFPVRIRIAVPPAGLGKQLTQMPDWFDHNAGADAWAMTPSGERGVLNDALSIHLADAMMASAFVARWCIGHRAEASDGVYRLREDEPKRRVRAPDHKTP
Ga0207700_109266272	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	MRAAQIATRYNERRFPVRIRIGVPPTGLGKQLTQMQDWLDHNAGADGWAMTPSGERRVHDALSIHFADATIAIAFVVRWCIGHRAEAADGVYRIREDEPKPRVRAPDHKTP
Ga0207664_118082981	3300025929	Agricultural Soil	MRGAQIAARDTERRFPVRIRIAVPPAGLGKQLTQIQDWLDHNAGADGWAMTPGGERGVLNDAISIHLADATIASAFVARWCIGYRAEASDGLYRM
Ga0207664_118738092	3300025929	Agricultural Soil	TQRRFPVRIRVALPTGGLGERLNEIHHWLDQNGGADGWSITPSGTRGIPNDAMAIYFADATIASAFVVRWCAGHRAASLNGLFQIREDEPKKRVPLKDHKTP
Ga0208983_10111964	3300027381	Forest Soil	MITEAERRFPVRIRLAIPTGGLGERLNQMQTWLDQNAGADGWAMTPSGARGVVNDAIAIYLADATIASAFVARWCAGHRAEAADGLFRVRED
Ga0209213_10122293	3300027383	Forest Soil	MIIEAERRFPVRIRLAIPTGGLGERLNQMQTWLDQNAGADGWAMTPSGARGVVNDAIAIYLGDATIASAFVARWCAGHRAEAADGLFRVREDGPAPRIGASHHKTPP
Ga0208984_10192811	3300027546	Forest Soil	MAASSRLMITEADRRFPLRIRLAIPAGGFGERLNHMHAWLDQNAGADGWAMTPSGIRTVVNDAVAVYFADAAMASAFVARWCAGHKAEAADGLFRVREDEPAPRTVASHHKTPP
Ga0208984_10666311	3300027546	Forest Soil	MAASSKFMIIEAERRFPVRIRLAIPTGGLGERLNQMHAWLDQNAGADGWAMTPSGARGVVNDAIAIYLADATIASAFVARWCAGHRAEAADGLFRVREDGPAPRIGASHHKTPP
Ga0209106_10372473	3300027616	Forest Soil	VAASSQLMIAEAERRFPVRIRLAVPAVGLGERLDHIYAWLDQNAGADGWAMTPCGIRTVVNDAIAVYFAEAPIASAFVARWCAGSKAETMNGLFRIRDDEPASRP
Ga0208988_10328172	3300027633	Forest Soil	MITEAERRFPVRIRLAIPTGGLGERLNQMQTWLDQNAGADGWAMTPSGARGVVNDAIAIYLGDATIASAFVARWCAGHRAEAADGLFRVREDEPAPRTVASHHKTPP
Ga0208990_10502043	3300027663	Forest Soil	MKEEPRMAASSRLMITEADRRFPLRIRLAIPAGGFGERLNHMHAWLDQNAGADGWAMTPSGIRTVVNDAVAVYFADAAMASAFVARWCAGHKAEAADGL
Ga0208990_10517742	3300027663	Forest Soil	MITEAERRFPVRIRLAIPTGGLGERLNQMQTWLDQNAGADGWAMTPSGARGVVNDAIAIYLADATIASAFVARWCAGHRAEAADGLFRVREDEPAPRIGAKPHKTP
Ga0208990_10527592	3300027663	Forest Soil	MAASSRLMINEAERRFPVRIRLAVPAVGLGERLDHIYAWLDQNAGADGWAMTPCGIRTVVNDAIAVYFAEAPIASAFVARWCAGSKAEAMNGLFRIRDDEPASRPPAAHHKSPP
Ga0208990_10557991	3300027663	Forest Soil	VRIRLALPTGGLGERLNQMQTWLDQNAGADGWAMTPSGIRTVINDAVAVYFADAEITSAFVARWCAGHKAEAANGLFRVREDEPAPRTVASHHKTPP
Ga0208990_10758091	3300027663	Forest Soil	MAASSRLMITEAERRFPVRIRIAADQGLGARLNQMHDWLDQNAGADGWAMTPSGIRTVINDVVAVYFADAAITSAFVARWCAGHRAEAADGLF
Ga0208981_10081874	3300027669	Forest Soil	MITEAERRFPVRIRLAIPTGGLGERLNQMQTWLDQNAGADGWAMTPSGARGVVNDAIAIYLADATIASAFVARWCAGHRAETADGLFRVREDEPAPRIGAKLHKTP
Ga0208991_10052046	3300027681	Forest Soil	MIIEAERRFPVRIRLAIPTGGLGERLNQMQTWLDQNAGADGWAMTPSGARGVVNDAIAIYLADATIASAFVARWCAGHKAEAANGLFRVREDEPAPRTVASHHKTPP
Ga0208991_11297481	3300027681	Forest Soil	MKEEPRMAASSRLMITEADRRFPLRIRLAIPAGGFGERLNHMHAWLDQSAGADGWAMTPSGMREIVNDSIAVYLADATIASAFVARWCAGHKTESMCGLFRVREDEPKPRIGATPHKTP
Ga0209380_104426291	3300027889	Soil	MAASSRLMIAEAERRFPVRVRIALPVGGFGERLNQMQGWLDQNAGADCWAMTPSGIRGVVNDAVAVHFADVVIASAFVTRWCRAQRVEIVDGLYRVREDEPAPRIGGAHHKTP
Ga0209488_100830132	3300027903	Vadose Zone Soil	MAASSRLMINEAERRFPVRIRLAVPAVGLGERLDHIYAWLDQNAGADGWAMTPCGIRTVVDDAIAVYFAEAPIASAFVARWCAGSKAETMNGLFRIRDDEPASRPPAAPPQVPTVKEPLRLNGERR
Ga0209488_101622975	3300027903	Vadose Zone Soil	MAASSRLMITEAERRFPVRIRIAADQGLGARLNQMHDWLDQNAGADGWAMTPSGARGVVNDAIAIYLADATIASAFVARWCAGHRAEAVDGLFRMREDEPTPRTVASHHKTPPPELWA
Ga0209526_100960311	3300028047	Forest Soil	MAASSRLMIAEAEQRFAVRVKIAVPEGGFGTRLIQMHVWLDENAGADAWAMTPAGFHGVVNDAVAVYFADVSMAAAFVARWCQAKRVEIVNGLFRVRDDEPPRRVGAAAHTSPVRNKE
Ga0209526_102547102	3300028047	Forest Soil	MAASSRLMITEAERRFPLRIRLAIPAGGFGERLDHMHAWLDQNAGADGWAMTPSGVRGVVNDAIAVYFSDATIASSFVARWCVGHKAKSMDGLFRVREDEPQRRMQLPAHKSPL
Ga0209526_102626021	3300028047	Forest Soil	MAASSRLMIAEAERRFPVRIRIAVPMGGFGERLNQMQSWLDQNAGADGWAMTPSGVRGVVNDAVAIHFADVAITGAFVARWCQAQRVEIADGLYRVREDEPARRIGAAHHKTP
Ga0137415_100695898	3300028536	Vadose Zone Soil	MAASSKFMIIEAERRFPVRIRLALPTGGLGERLDQMQTWLDQNAGTDGWAMTPSGARGVVNDAIAIYLADATIASAFVARWCAGHRAETADGLFRVREDEPAPRIGAKPHKTP
Ga0073994_100259871	3300030991	Soil	MAASSKLMITEAERRFPVRIRLAIPTGGLGERLNQMYAWLDQNAGADGWAMTPSGMREIVNDSIAVYLADATIASAFVARWCAGHKAESMCGLFRVREDEPKPRIGAMPHKTP
Ga0307472_1014016351	3300032205	Hardwood Forest Soil	FPVRIRIAVPGQGLGRRLTQMQDWLDQNAGADGWAWTPSGGRGIANDAVSIHLADATIASAFVARWCIGHRAEAADGVFLIREDEPKPRIRAADHKTP

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F064954

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences