Metagenome / Metatranscriptome Family F064930

Basic Information
Family ID	F064930
Family Type	Metagenome / Metatranscriptome
Number of Sequences	128
Average Sequence Length	44 residues
Representative Sequence	MPAKRPAPKSTKGKKAASRTVVRKALPRKPDAARVRVVAAH
Number of Associated Samples	110
Number of Associated Scaffolds	128

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	100.00 %
% of genes near scaffold ends (potentially truncated)	89.84 %
% of genes from short scaffolds (< 2000 bps)	78.91 %
Associated GOLD sequencing projects	108
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.16

Most Common Taxonomy
Group	Bacteria (53.125 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (47.656 % of family members)
Environment Ontology (ENVO)	Unclassified (48.438 % of family members)
Earth Microbiome Project Ontology (EMPO)	Unclassified (54.688 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 4.35% β-sheet: 0.00% Coil/Unstructured: 95.65%
Feature Viewer

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Pfam ID	Name	% Frequency in 128 Family Scaffolds
PF14489	QueF	70.31
PF02463	SMC_N	23.44
PF06470	SMC_hinge	1.56
PF01642	MM_CoA_mutase	0.78
PF03120	DNA_ligase_OB	0.78

COG ID	Name	Functional Category	% Frequency in 128 Family Scaffolds
COG1196	Chromosome segregation ATPase Smc	Cell cycle control, cell division, chromosome partitioning [D]	1.56
COG0272	NAD-dependent DNA ligase	Replication, recombination and repair [L]	0.78
COG1884	Methylmalonyl-CoA mutase, N-terminal domain/subunit	Lipid transport and metabolism [I]	0.78

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	53.12 %
Unclassified	root	N/A	46.88 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	53.12 %
Unclassified	root	N/A	46.88 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	53.12 %
Unclassified	root	N/A	46.88 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	47.66 %
Unclassified	root	N/A	46.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	46.88 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	43.75 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1.56 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	46.88 %
Chromatiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales	1.56 %
unclassified Betaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria	1.56 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	46.88 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1.56 %
unclassified Chromatiales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → unclassified Chromatiales	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	46.88 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1.56 %
Chromatiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → unclassified Chromatiales → Chromatiales bacterium	0.78 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300005178\|Ga0066688_10162849	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1402	Open in IMG/M
3300005186\|Ga0066676_10153336	All Organisms → cellular organisms → Bacteria → Proteobacteria	1450	Open in IMG/M
3300005328\|Ga0070676_11430346	All Organisms → cellular organisms → Bacteria	531	Open in IMG/M
3300005436\|Ga0070713_100523337	All Organisms → cellular organisms → Bacteria	1121	Open in IMG/M
3300005447\|Ga0066689_10879564	All Organisms → cellular organisms → Bacteria → Proteobacteria	554	Open in IMG/M
3300005587\|Ga0066654_10216725	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1000	Open in IMG/M
3300005618\|Ga0068864_102589547	All Organisms → cellular organisms → Bacteria	513	Open in IMG/M
3300006028\|Ga0070717_10520378	All Organisms → cellular organisms → Bacteria	1076	Open in IMG/M
3300006031\|Ga0066651_10037994	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales	2196	Open in IMG/M
3300006176\|Ga0070765_100165566	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1984	Open in IMG/M
3300009012\|Ga0066710_100297516	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	2362	Open in IMG/M
3300010048\|Ga0126373_10428371	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1353	Open in IMG/M
3300010321\|Ga0134067_10035917	All Organisms → cellular organisms → Bacteria	1554	Open in IMG/M
3300010358\|Ga0126370_12610142	Not Available	505	Open in IMG/M
3300010359\|Ga0126376_12993558	Not Available	522	Open in IMG/M
3300010361\|Ga0126378_12224095	Not Available	626	Open in IMG/M
3300010362\|Ga0126377_11129534	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	853	Open in IMG/M
3300010376\|Ga0126381_101599369	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	942	Open in IMG/M
3300011120\|Ga0150983_14892333	Not Available	581	Open in IMG/M
3300012361\|Ga0137360_10103641	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	2182	Open in IMG/M
3300012971\|Ga0126369_13395032	Not Available	522	Open in IMG/M
3300015373\|Ga0132257_102890004	Not Available	626	Open in IMG/M
3300016371\|Ga0182034_11194504	Not Available	661	Open in IMG/M
3300017928\|Ga0187806_1185308	Not Available	700	Open in IMG/M
3300017930\|Ga0187825_10045016	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1493	Open in IMG/M
3300017959\|Ga0187779_10425897	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	869	Open in IMG/M
3300017970\|Ga0187783_10029171	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	4088	Open in IMG/M
3300017973\|Ga0187780_10670605	Not Available	747	Open in IMG/M
3300017974\|Ga0187777_10855794	Not Available	652	Open in IMG/M
3300018085\|Ga0187772_10068253	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	2228	Open in IMG/M
3300021088\|Ga0210404_10510154	Not Available	680	Open in IMG/M
3300021171\|Ga0210405_11210791	Not Available	559	Open in IMG/M
3300021180\|Ga0210396_10978076	Not Available	718	Open in IMG/M
3300021362\|Ga0213882_10460471	Not Available	541	Open in IMG/M
3300021407\|Ga0210383_10603803	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	946	Open in IMG/M
3300021560\|Ga0126371_11987019	Not Available	699	Open in IMG/M
3300024330\|Ga0137417_1101735	Not Available	616	Open in IMG/M
3300025905\|Ga0207685_10805086	Not Available	518	Open in IMG/M
3300025916\|Ga0207663_10490319	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	953	Open in IMG/M
3300025942\|Ga0207689_11371472	Not Available	593	Open in IMG/M
3300025961\|Ga0207712_11359436	Not Available	635	Open in IMG/M
3300026312\|Ga0209153_1311296	Not Available	505	Open in IMG/M
3300026333\|Ga0209158_1144437	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	875	Open in IMG/M
3300026551\|Ga0209648_10052997	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	3466	Open in IMG/M
3300027535\|Ga0209734_1005567	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	2226	Open in IMG/M
3300027643\|Ga0209076_1033417	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1437	Open in IMG/M
3300028906\|Ga0308309_11392374	Not Available	601	Open in IMG/M
3300029910\|Ga0311369_10329249	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1351	Open in IMG/M
3300031090\|Ga0265760_10075870	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1036	Open in IMG/M
3300031544\|Ga0318534_10055156	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	2231	Open in IMG/M
3300031544\|Ga0318534_10082226	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1831	Open in IMG/M
3300031544\|Ga0318534_10630633	Not Available	608	Open in IMG/M
3300031668\|Ga0318542_10048436	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1920	Open in IMG/M
3300031668\|Ga0318542_10050485	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1886	Open in IMG/M
3300031668\|Ga0318542_10097767	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1413	Open in IMG/M
3300031708\|Ga0310686_106990575	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	892	Open in IMG/M
3300031713\|Ga0318496_10603395	Not Available	606	Open in IMG/M
3300031720\|Ga0307469_10903563	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	818	Open in IMG/M
3300031736\|Ga0318501_10368877	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	773	Open in IMG/M
3300031747\|Ga0318502_10552832	Not Available	691	Open in IMG/M
3300031753\|Ga0307477_10550133	Not Available	781	Open in IMG/M
3300031763\|Ga0318537_10179976	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	787	Open in IMG/M
3300031764\|Ga0318535_10315198	Not Available	699	Open in IMG/M
3300031765\|Ga0318554_10123486	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1462	Open in IMG/M
3300031770\|Ga0318521_10046157	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	2226	Open in IMG/M
3300031770\|Ga0318521_10387857	Not Available	831	Open in IMG/M
3300031771\|Ga0318546_10120946	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1740	Open in IMG/M
3300031777\|Ga0318543_10185985	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	920	Open in IMG/M
3300031778\|Ga0318498_10198871	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	909	Open in IMG/M
3300031781\|Ga0318547_10132139	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1455	Open in IMG/M
3300031793\|Ga0318548_10285863	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	810	Open in IMG/M
3300031796\|Ga0318576_10610312	Not Available	514	Open in IMG/M
3300031797\|Ga0318550_10220935	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	918	Open in IMG/M
3300031797\|Ga0318550_10343396	Not Available	723	Open in IMG/M
3300031823\|Ga0307478_10084081	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	2435	Open in IMG/M
3300031823\|Ga0307478_10232325	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1493	Open in IMG/M
3300031831\|Ga0318564_10476771	Not Available	542	Open in IMG/M
3300031846\|Ga0318512_10243159	Not Available	887	Open in IMG/M
3300031860\|Ga0318495_10088237	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1391	Open in IMG/M
3300031860\|Ga0318495_10274265	Not Available	753	Open in IMG/M
3300031879\|Ga0306919_10974846	Not Available	649	Open in IMG/M
3300031879\|Ga0306919_11487711	Not Available	510	Open in IMG/M
3300031880\|Ga0318544_10156266	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	875	Open in IMG/M
3300031893\|Ga0318536_10267571	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	868	Open in IMG/M
3300031897\|Ga0318520_10539095	Not Available	723	Open in IMG/M
3300031910\|Ga0306923_11466894	Not Available	715	Open in IMG/M
3300031942\|Ga0310916_11510849	Not Available	547	Open in IMG/M
3300031945\|Ga0310913_10506232	Not Available	857	Open in IMG/M
3300031946\|Ga0310910_11079487	Not Available	625	Open in IMG/M
3300031947\|Ga0310909_11099136	Not Available	646	Open in IMG/M
3300031981\|Ga0318531_10189405	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	926	Open in IMG/M
3300032008\|Ga0318562_10162535	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1288	Open in IMG/M
3300032008\|Ga0318562_10852554	Not Available	520	Open in IMG/M
3300032025\|Ga0318507_10001127	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	6515	Open in IMG/M
3300032025\|Ga0318507_10212366	Not Available	836	Open in IMG/M
3300032039\|Ga0318559_10228102	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	859	Open in IMG/M
3300032043\|Ga0318556_10099516	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1470	Open in IMG/M
3300032052\|Ga0318506_10056756	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1595	Open in IMG/M
3300032055\|Ga0318575_10250758	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	893	Open in IMG/M
3300032065\|Ga0318513_10027476	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	2436	Open in IMG/M
3300032066\|Ga0318514_10361516	Not Available	769	Open in IMG/M
3300032076\|Ga0306924_10062416	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	4141	Open in IMG/M
3300032089\|Ga0318525_10340856	Not Available	769	Open in IMG/M
3300032091\|Ga0318577_10646514	Not Available	502	Open in IMG/M
3300032205\|Ga0307472_101549089	Not Available	649	Open in IMG/M
3300032770\|Ga0335085_10176195	All Organisms → cellular organisms → Bacteria → Proteobacteria	2647	Open in IMG/M
3300032805\|Ga0335078_10471982	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1621	Open in IMG/M
3300032829\|Ga0335070_10495297	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1159	Open in IMG/M
3300032892\|Ga0335081_10739179	All Organisms → cellular organisms → Bacteria	1186	Open in IMG/M
3300032897\|Ga0335071_10067050	All Organisms → cellular organisms → Bacteria	3525	Open in IMG/M
3300033289\|Ga0310914_10389951	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1260	Open in IMG/M
3300033289\|Ga0310914_10463289	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1147	Open in IMG/M
3300033289\|Ga0310914_11513631	Not Available	574	Open in IMG/M
3300033289\|Ga0310914_11784542	Not Available	519	Open in IMG/M
3300033290\|Ga0318519_10821025	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → unclassified Chromatiales → Chromatiales bacterium	572	Open in IMG/M
3300033805\|Ga0314864_0042112	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1022	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	96.09%
Host-Associated	Host-Associated	3.91%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	93.75%
Plants	Host-Associated → Plants	3.91%
Aquatic	Environmental → Aquatic	2.34%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	92.19%
Freshwater	Environmental → Aquatic → Freshwater	2.34%
Rhizoplane	Host-Associated → Plants → Rhizoplane	2.34%
Rhizosphere	Host-Associated → Plants → Rhizosphere	1.56%
Peat	Environmental → Terrestrial → Peat	0.78%
Rock-Dwelling (Subaerial Biofilms)	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms)	0.78%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	76.56%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	9.38%
Loam	Environmental → Terrestrial → Soil → Loam	6.25%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	2.34%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	1.56%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	0.78%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified	0.78%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.78%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	0.78%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.78%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	55.47%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	13.28%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	9.38%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	7.81%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	3.12%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	3.12%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	2.34%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	1.56%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	0.78%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified → Unclassified	0.78%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.78%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	0.78%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.78%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	47.66%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	6.25%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	6.25%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	4.69%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	3.91%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	3.91%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	3.91%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.12%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	2.34%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.34%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	2.34%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	1.56%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.56%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	1.56%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	1.56%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.78%
Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Peatland	0.78%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	0.78%
Exposed Rock	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified → Unclassified → Exposed Rock	0.78%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.78%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.78%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.78%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.78%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.78%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300005178	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137	Environmental	Open in IMG/M
3300005186	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125	Environmental	Open in IMG/M
3300005328	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG	Host-Associated	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005447	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138	Environmental	Open in IMG/M
3300005587	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_103	Environmental	Open in IMG/M
3300005618	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2	Host-Associated	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006031	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Angelo_100	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010303	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09182015	Environmental	Open in IMG/M
3300010321	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09212015	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300017928	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_1	Environmental	Open in IMG/M
3300017930	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_5	Environmental	Open in IMG/M
3300017932	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW-S_4	Environmental	Open in IMG/M
3300017959	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_10_MG	Environmental	Open in IMG/M
3300017970	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300017973	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_20_MG	Environmental	Open in IMG/M
3300017974	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_10_MG	Environmental	Open in IMG/M
3300018085	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300021088	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-M	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental	Open in IMG/M
3300021362	Barbacenia macrantha exposed rock microbial communities from rupestrian grasslands, the National Park of Serra do Cipo, Brazil - ER_R09	Environmental	Open in IMG/M
3300021407	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300024330	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300025905	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025942	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025961	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026312	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_120 (SPAdes)	Environmental	Open in IMG/M
3300026322	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_136 (SPAdes)	Environmental	Open in IMG/M
3300026333	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140 (SPAdes)	Environmental	Open in IMG/M
3300026551	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)	Environmental	Open in IMG/M
3300027535	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_M2 (SPAdes)	Environmental	Open in IMG/M
3300027643	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3 (SPAdes)	Environmental	Open in IMG/M
3300027842	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300029910	III_Palsa_E2 coassembly	Environmental	Open in IMG/M
3300031090	Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031544	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f26	Environmental	Open in IMG/M
3300031668	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f23	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031713	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f22	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031736	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f21	Environmental	Open in IMG/M
3300031747	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f22	Environmental	Open in IMG/M
3300031753	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515	Environmental	Open in IMG/M
3300031763	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f29	Environmental	Open in IMG/M
3300031764	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f27	Environmental	Open in IMG/M
3300031765	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f22	Environmental	Open in IMG/M
3300031770	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031777	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f24	Environmental	Open in IMG/M
3300031778	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f24	Environmental	Open in IMG/M
3300031781	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20	Environmental	Open in IMG/M
3300031793	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f21	Environmental	Open in IMG/M
3300031796	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f24	Environmental	Open in IMG/M
3300031797	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f23	Environmental	Open in IMG/M
3300031823	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05	Environmental	Open in IMG/M
3300031831	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f20	Environmental	Open in IMG/M
3300031846	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f19	Environmental	Open in IMG/M
3300031859	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f25	Environmental	Open in IMG/M
3300031860	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f25	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031880	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f25	Environmental	Open in IMG/M
3300031893	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f28	Environmental	Open in IMG/M
3300031897	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300031981	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f25	Environmental	Open in IMG/M
3300032008	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f18	Environmental	Open in IMG/M
3300032010	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f22	Environmental	Open in IMG/M
3300032025	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f20	Environmental	Open in IMG/M
3300032039	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f21	Environmental	Open in IMG/M
3300032043	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f24	Environmental	Open in IMG/M
3300032052	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f19	Environmental	Open in IMG/M
3300032055	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f23	Environmental	Open in IMG/M
3300032065	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f20	Environmental	Open in IMG/M
3300032066	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f18	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032089	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f23	Environmental	Open in IMG/M
3300032091	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f25	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300032770	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5	Environmental	Open in IMG/M
3300032805	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2	Environmental	Open in IMG/M
3300032829	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.3	Environmental	Open in IMG/M
3300032892	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5	Environmental	Open in IMG/M
3300032897	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.5	Environmental	Open in IMG/M
3300032955	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.5	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M
3300033290	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f15	Environmental	Open in IMG/M
3300033805	Tropical peat soil microbial communities from peatlands in Loreto, Peru - MAQ_50_10	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0066688_101628493	3300005178	Soil	MPAKRPAPRSAKGRKAASRPAVRKATAHKPEPLRVRAVAA
Ga0066676_101533363	3300005186	Soil	MPAKRPAPRSAKGKKATSRPAVRKATTHKPEPLRLRAVAAPPHKTAPPHKTA
Ga0070676_114303461	3300005328	Miscanthus Rhizosphere	MPAKRPAPKAAKGKKAVSRPPARKAAARKPEAPRARVVATQARKNA
Ga0070713_1005233371	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MPAKRPAPKSAKGKKAASRPPARKALARKPEPARARTAAA
Ga0066689_108795641	3300005447	Soil	MPAKRPAPRSAKGRKAASRPAVRKATAHKPEPLRVRAVAALPHK
Ga0066654_102167251	3300005587	Soil	MPAKRPAPKSAKGRKAASRPAVRKAVGRKPEPVRVRAAAG
Ga0068864_1025895471	3300005618	Switchgrass Rhizosphere	MPAKRPAPKAAKGKKAVSRPPARKAAARKPEAPRAR
Ga0070717_105203783	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MPAKRPAPKAAKGKKAVSRPPARKAVARKPEAPRARVVATQARKNAVLPKKP
Ga0066651_100379943	3300006031	Soil	MPAKRPAPRSAKGKKAASRPAVRKATAHKPEPLRVRA
Ga0070765_1001655663	3300006176	Soil	MPAKRPAPKSAKGKKTVGRSVVRKAVARKPEAPRTRTVVATHARKAVVPPRKP
Ga0066710_1002975161	3300009012	Grasslands Soil	MPAKRPAPRSAKGRKAASRPAVRKATAHKPEPLRVRAVAAAPHKT
Ga0126373_104283713	3300010048	Tropical Forest Soil	MPAKRPAPKAAKGKKAASRPAVRKAVVRKPEPVRARVA
Ga0134082_100426833	3300010303	Grasslands Soil	MPAKRPAPRSAKGKKAASRPAVRKATAHKPEPLRVRAVAAPPHKTAPPHKTAPPHK
Ga0134067_100359173	3300010321	Grasslands Soil	MPAKRPALRSAKGKKAASRPAVRKATAHKPEPLRVRAVAAPPHKTA
Ga0126370_126101422	3300010358	Tropical Forest Soil	MPAKRPAPKSTKGKKAASRPPARKALARKPDVVRARVVAVHARKS
Ga0126376_129935581	3300010359	Tropical Forest Soil	MPGKRPAAKSPKGKKTASRPAARKSAARKPDTARVRVVAAHVRKSPPIG
Ga0126378_122240952	3300010361	Tropical Forest Soil	MPAKRAAPKSAKGRKAPGRPAVRKATAARKTEAPRGRT
Ga0126377_111295341	3300010362	Tropical Forest Soil	MPGKRPAAKSPKGKKAASRPAARKPAVRKPDTARARVVAAHVRKGPPTAA
Ga0126381_1015993693	3300010376	Tropical Forest Soil	MPAKRPAPKSPKGKKAASRPAVRKALPREPDAARARVVAVHARKSTSATPP
Ga0150983_148923331	3300011120	Forest Soil	MPAKRPAPKSAKGKKAASRSPVRKVLPRKGDASRARAVATHARKSAA
Ga0137360_101036413	3300012361	Vadose Zone Soil	MPAKRPAPRSAKVKKAASRPAVRKATAHKAEPLRVRAVAALPH
Ga0126369_133950321	3300012971	Tropical Forest Soil	MPAKRPAPEYTKGKKAASRTAVRKALPRKPDTARARVVPVQV
Ga0164305_111738752	3300012989	Soil	MPGKRPAPKSPKGKKTASRPAVRKSAARKPDAARARVVAAHIRKSTPTAVPRKP
Ga0132257_1028900042	3300015373	Arabidopsis Rhizosphere	MPAKKPAPKSTKGKKAASRPATRKALGRKPDSARARVV
Ga0182034_111945042	3300016371	Soil	MPVKRPAAKSPKGKKAASRPAARKALGRKPDSARARVVVVGHARKS
Ga0187806_11853081	3300017928	Freshwater Sediment	MPAKRPAAKSPKGKKAASRTAVRKALPRKAEATRSRVVVAHG
Ga0187825_100450163	3300017930	Freshwater Sediment	MPAKKTAPKSAKGRKATGRPAVRKIAAARKTEAGRGRASAHARKTTP
Ga0187814_103895782	3300017932	Freshwater Sediment	MPAKKPAPKSTKGKKAASRATARKTLGRKPDTGRARVVAAHARKNTATAPRKAPSAH
Ga0187779_104258971	3300017959	Tropical Peatland	MPAKRPAPKSTKGKKAASRPPARKPLARKPDVARARVV
Ga0187783_100291713	3300017970	Tropical Peatland	MPAKRPAPKSAKGKKAASRPPVRKAAARKPEIARARVIGVHARKSLAAPQRKPGV
Ga0187780_106706052	3300017973	Tropical Peatland	MPAKRTAPKSAKGRKASSRPPVRKATAARKAEAPRGRTAA
Ga0187777_108557942	3300017974	Tropical Peatland	MPAKRTAPKSAKGRKASSRPPVRKATVARKAEAARGRAAAHARK
Ga0187772_100682533	3300018085	Tropical Peatland	MPAKRTAPKSAKGRKASSRPPVRKAAVPRKAEAPRGRAAAHARKSPAP
Ga0210404_105101541	3300021088	Soil	MPAKRPAPKSAKGKKAVSRPPARKAVVARKPEPTRPRP
Ga0210405_112107912	3300021171	Soil	MPAKRPAPKSAKGKKAASRSPVRKVVARKSEASRA
Ga0210396_109780761	3300021180	Soil	MPAKKTAPKSAKGRKATGRPAVRKIAAARKTETGRGRAAVH
Ga0213882_104604712	3300021362	Exposed Rock	MAAKRATPKAAKGKKSASRAPARKAQPRKPEPARSRVAA
Ga0210383_106038033	3300021407	Soil	MPAKRPAPKSAKGKKAASRPAARKPIARKPEVARVRPVSAQVRKGVAAAPKKALA
Ga0126371_119870192	3300021560	Tropical Forest Soil	MPAKRTAPKSTKGKKATSRPAVRKAVPRKSEAARPRVVSAHARKGPAAPLPRKPAANPGEPAVE
Ga0137417_11017351	3300024330	Vadose Zone Soil	MPAKRPAPKSAKGKKAARPAVRKGVGRKAEPVRRQGS
Ga0207685_108050862	3300025905	Corn, Switchgrass And Miscanthus Rhizosphere	MPAKRPAPKSTKGKKAASRPPARKPLARKPDVARARVVAAHARK
Ga0207663_104903191	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	MSGKRPAATKSPKGKKTASRPAARKSAPRKPDTARARVVAAH
Ga0207689_113714722	3300025942	Miscanthus Rhizosphere	MPAKRPAPKAAKGKKAVSRPPARKAAARKPEAPRARVVATQARKN
Ga0207712_113594361	3300025961	Switchgrass Rhizosphere	MPAKRPAPKAAKGKKAVSRPPARKAVARKPEAPRARVVATQARKNAVLP
Ga0209153_13112961	3300026312	Soil	MPAKRPAPRSAKGRKAASRPAVRKATAHKPEPLRVRAVAAAPHKTPP
Ga0209687_12508962	3300026322	Soil	MPGKRPAPKSAKGKKAPSRPAVRKAVGHKPEPVRVRAAPGHARKSAA
Ga0209158_11444373	3300026333	Soil	MPGKRPAPKSAKGKKAPSRPAVRKAVGHKPEPVRVR
Ga0209648_100529971	3300026551	Grasslands Soil	MPAKRPAPKSAKGKKAASRPAVRKAVGRKAEPVRARAAVAHVRK
Ga0209734_10055671	3300027535	Forest Soil	MPAKRPAPKSAKGKKAASRPAVRKAVGRKAEPVRV
Ga0209076_10334173	3300027643	Vadose Zone Soil	MPAKRPAPKSAKGKKAASRPVLRKAVGRKTEPVRARGAVAHARKTVA
Ga0209580_106729721	3300027842	Surface Soil	MPAKKTAPKSAKGRKATGRPAVRKIAAARKTETGRGRTAVHGRKSPSPPKKPLAHPP
Ga0308309_113923741	3300028906	Soil	MAAKKPAPKSAKGKKPVSRPPARKPLARKPEGARPRPVSAQVRKT
Ga0311369_103292493	3300029910	Palsa	MAAKKPAPKSAKGKKPVSRPPARKPLARKPEAARPRPVSAQ
Ga0265760_100758701	3300031090	Soil	MPAKRPAPKSAKGKKAASRSPVRKVVARKSEASRARAVATHARKGAA
Ga0318534_100551561	3300031544	Soil	MPAKRPAPKSPKGKKAASRPPVRKALTRKPDNARARVVAVHARKS
Ga0318534_100822261	3300031544	Soil	MPAKRPAPKSTKGKKAASRTVVRKALPRKPDAARVRVVAAHGRKTALAAPPRKAPV
Ga0318534_106306332	3300031544	Soil	MPAKRPAPKSTKGKKAASRPVVRKALPRKPDAVRARVVVAHGRK
Ga0318542_100484363	3300031668	Soil	MPAKRPAPKSTKGKKAASRTVVRKALPRKPDAARVRVVAAHGRKT
Ga0318542_100504853	3300031668	Soil	MPGKRPAAKSPKGKKAASRPAARKSAARKPDTARAR
Ga0318542_100977671	3300031668	Soil	MPAKRPAPKSTKGKKAASRTVVRKALPRKPETART
Ga0310686_1069905751	3300031708	Soil	MPAKRPAPKSAKGKKAVSRPAARKTVAARKPEPAR
Ga0318496_102045861	3300031713	Soil	MPAKKPAAKSTKGKKAASRTAVRKALPRKPDTTRARVVAVHARKSSVAAPRK
Ga0318496_106033951	3300031713	Soil	MPVKRPAAKSTKGKKAASRPAARKALGRKPDSARARVVV
Ga0307469_109035631	3300031720	Hardwood Forest Soil	MPAKRPAPKSAKGKKAASRPPARKALARKPEPARARTAAAVSHARKAVV
Ga0318501_101702443	3300031736	Soil	MPAKRPAPKSTKGKKAASRTVVRKALPRKPETARTRVVAAQVRKNAAAAPRQAAVAQSP
Ga0318501_103688773	3300031736	Soil	MVAKRPAPKSTKGKKAPSRTAVRKVLPRKPDAARAR
Ga0318502_105528321	3300031747	Soil	MPAKRPAQKSTKGKKAASRPAVRKALPRKPDGARARVVAAVHGRKTTIA
Ga0307477_105501331	3300031753	Hardwood Forest Soil	MPAKRPAPKSAKGKKAASRPTTVRKSAARKSEGVRARSPVP
Ga0318537_101799761	3300031763	Soil	MPAKRPAPKSTKGKKAASRTVVRKALPRKPDAARVRVVAAHGR
Ga0318535_103151982	3300031764	Soil	MPVKRPAAKSTKGKKAASRPAARKALGRKPDSARARV
Ga0318554_101234863	3300031765	Soil	MPVKRPAAKSTKGKKAASRPAARKALGRKPDSARARVVVVAHARKSTP
Ga0318521_100461573	3300031770	Soil	MPAKRPAPKSTKGKKAASRTVVRKALPRKPDAARVR
Ga0318521_103878571	3300031770	Soil	MPAKKPAAKSTKGKKAASRTAVRKALPRKAGTRRGGR
Ga0318546_101209461	3300031771	Soil	MPAKRPAPKSTKGKKAASRTVVRKALPRKPETARTRVVAAQVRKNAAAAPRQA
Ga0318543_101859853	3300031777	Soil	MPVKRPAAKSTKGKKAASRPAARKALGRKPDSARARVVVVAHARKS
Ga0318498_101988713	3300031778	Soil	MPAKRPAPKSTKGKKAASRTVVRKALPRKPDAARVRVVAAH
Ga0318547_101321391	3300031781	Soil	MPAKRPAPKSTKGKKAASRTVVRKALPRKPDAARVRV
Ga0318548_102858633	3300031793	Soil	MPGKRPAAKSPKGKKAASRPAARKSAARKPDTARARVV
Ga0318576_106103122	3300031796	Soil	MPAKKSTKGKKAASRPAVRKALPRKPDGARARVVAA
Ga0318550_102209353	3300031797	Soil	MPGKRPAAKSPKGKKAASRPAARKSAARKPDTARARVVAAHVRKST
Ga0318550_103433962	3300031797	Soil	MPAKRPAQKSTKGKKAASRPAVRKALPRKPDGARAR
Ga0307478_100840813	3300031823	Hardwood Forest Soil	MPAKRAVPKSEKGKKAASRPAVRKTLARKPDAARARAAAAHPRKT
Ga0307478_102323253	3300031823	Hardwood Forest Soil	MPAKKPAAKSPKGKKAASRTAVRKALPRKADTPRARVVAVHA
Ga0318564_104767711	3300031831	Soil	MPAKRPAPKSTKGKKAASRTVVRKALPRKPDAARVRVVAAHGRKTALA
Ga0318512_101819333	3300031846	Soil	MPAKRPAPKSTKGKKAASRTVVRKALPRKPETARTRVVAAQVRKNAAAAPRKAAVA
Ga0318512_102431593	3300031846	Soil	MVAKRPAPKSTKGKKAPSRTPVRKALPRKPDAARARVVAAHVRKSAALPPRKASLAE
Ga0318527_100591693	3300031859	Soil	MPAKRPAPKSTKGKKAASRTAVRKALPRKPDAARARVVTVQVRKNVAVAPRKAAVAPSP
Ga0318495_100882371	3300031860	Soil	MPAKRPAPKSTKGKKAASRTVVRKALPRKPETARTRVVAAQVRK
Ga0318495_102742652	3300031860	Soil	MPAKRPAQKSTKGKKAASRPAVRKALPRKPDGARARVVAAV
Ga0306919_109748462	3300031879	Soil	MPAKRPAPKSTKGKKAASRTAVRKALPRKPDTARARVVAVQVRKN
Ga0306919_114877111	3300031879	Soil	MPAKRPATKSTKGKKAASRTTVRKALPRKPDAARARVVAAHARKST
Ga0318544_101562661	3300031880	Soil	MVAKRPAPKSTKGKKAPSRTAVRKVLPRKPDAARARVVAAHVRKSAALPPRK
Ga0318536_102675713	3300031893	Soil	MVAKRPAPKSTKGKKAPSRTAVRKVLPRKPDAARARVVAAHVRKSAALPPRKAPLAEET
Ga0318520_105390952	3300031897	Soil	MVAKRPAPKSTKGKKAPSRTAVRKVLPRKPDAARARVVAAHVR
Ga0306923_114668942	3300031910	Soil	MPAKRPAPKSTKGKKAASRTAVRKALPRKPDAARARVVTV
Ga0310916_115108492	3300031942	Soil	MVAKRPAPKSTKGKKAPSRTAVRKVLPRKPDAARARV
Ga0310913_105062322	3300031945	Soil	MPAKRPAPKSTKGKKAASRTVVRKALPRKPDAARVRVVAAHGRKTALAAP
Ga0310910_110794871	3300031946	Soil	MPAKRPAQKSTKGKKAASRPAVRKALPRKPDGARARVVAAVH
Ga0310909_110991362	3300031947	Soil	MPGKRPAAKSPKGKKAASRPAARKSAARKPDTARARVVAA
Ga0318531_101894053	3300031981	Soil	MVAKRPAQKSTKGKKAPSRTAVRKALPRKPDAVRARVVAA
Ga0318562_101625353	3300032008	Soil	MPAKRPAQKSTKGKKAASRPAVRKALPRKPDGARARVVAAVHGRK
Ga0318562_108525542	3300032008	Soil	MVAKRPAPKSTKGKKAPSRTAVRKVLPRKPDAARARVVAAHVRKSA
Ga0318569_102948102	3300032010	Soil	MPAKRPAPKSTKGKKAASRTVVRKALPRKPETARTRVVAAQVRKNAAAAPRQAAVAQSPE
Ga0318507_100011271	3300032025	Soil	MPAKRPAPKSTKGKKAASRTVVRKALPRKPETARTRVVAAQVRKNAAAAPRQ
Ga0318507_102123662	3300032025	Soil	MPAKRPAPKSTKGKKAASRTVVRKALPRKPDAARVRVV
Ga0318559_102281021	3300032039	Soil	MPAKRPAPKSTKGKKAASRTVVRKALPRKPDAARVRVVA
Ga0318556_100698893	3300032043	Soil	MPAKRPAPKSTKGKKAASRTVVRKALPRKPETARTRVVAAQVRKNAAAAPRKAAVAQS
Ga0318556_100995161	3300032043	Soil	MPVKRPAAKSTKGKKAASRPAARKALGRKPDSARAR
Ga0318506_100567561	3300032052	Soil	MPAKRPAPKSTKGKKAASRTVVRKALPRKPDAARVRVVAAHGRKTALAAPPRKA
Ga0318575_102507583	3300032055	Soil	MPGKRPAAKSPKGKKAASRPAARKSAARKPDTARARVVAAHVRK
Ga0318513_100274761	3300032065	Soil	MVAKRPAPKSTKGKKAPSRTAVRKVLPRKPDAARARVVAAHVRK
Ga0318514_103615161	3300032066	Soil	MPAKRPAPKSTKGKKAASRTAVRKALPRKPDAARARVVTVQVRK
Ga0306924_100624163	3300032076	Soil	MPAKRPAPKSTKGKKAASRTVVRKALPRKPETARTRVVAAQVRKNAAAAPRQAA
Ga0318525_103408561	3300032089	Soil	MPAKRPAPKSPKGKKAASRPPVRKALTRKPDNARARVVAVHARKSTAA
Ga0318577_106465142	3300032091	Soil	MPAKRPAPKSTKGKKAASRPVVRKALPRKPDAVRARVVVAHGRKSTPAPHH
Ga0307472_1015490891	3300032205	Hardwood Forest Soil	MPAKRPAPKSAKGKKAASRPAVRKAVGRKAEPVRVRGAVA
Ga0335085_101761953	3300032770	Soil	MPAKRAAPKSAKGKKPPSRPAARKVAARRPEPARARTVAGRKPAAAVR
Ga0335078_104719821	3300032805	Soil	MPAKKPAPKSAKGKKATSRPTVRKVAARKGETARTR
Ga0335070_104952971	3300032829	Soil	MAAKKPAPKSAKGKKPARRPAARKSPARTAEAPRARVAAAP
Ga0335081_107391791	3300032892	Soil	MPAKRTAPKSAKGRKASSRPPARKAAVARKAEAPRGRTA
Ga0335071_100670503	3300032897	Soil	MPVKRTAPKSAKGRKATGRPAARKPAAARKSEAARG
Ga0335076_104216781	3300032955	Soil	MPAKKPVPKPSKPKKAVSRPTARKAAPRKSAERSE
Ga0310914_103899511	3300033289	Soil	MVAKRPAPKSTKGKKAPSRTAVRKVLPRKPDAARARVVAAHVRKSAALPP
Ga0310914_104632891	3300033289	Soil	MPAKRPAPKSTKGKKAASRTAVRKALPRKPDAARARVVTVQVRKNVAVA
Ga0310914_115136311	3300033289	Soil	MPAKRPAPKSPKGKKAASRPPVRKALTRKPDNARARV
Ga0310914_117845421	3300033289	Soil	MPAKRPAQKSTKGKKAASRPAVRKALPRKPDGARARGVAAV
Ga0318519_108210252	3300033290	Soil	MPAKRPAPKSTKGKKAASRTAVRKALPRKPDAARARVVTVQVRKNVA
Ga0314864_0042112_2_118	3300033805	Peatland	MPAKRPAPKSAKGKKAASRPTTRKSLARRPESARAKATT

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.16
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.16
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F064930

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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