Metagenome Family F064867

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F064867
Family Type	Metagenome
Number of Sequences	128
Average Sequence Length	60 residues
Representative Sequence	MGDEKPHVSAIELWGYTSGTANLTDDDFEHLLFCIECQSLVNQFIDVLDHIPPVNPSHAA
Number of Associated Samples	87
Number of Associated Scaffolds	128

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	51.56 %
% of genes near scaffold ends (potentially truncated)	31.25 %
% of genes from short scaffolds (< 2000 bps)	86.72 %
Associated GOLD sequencing projects	81
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.61

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (81.250 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil (25.000 % of family members)
Environment Ontology (ENVO)	Unclassified (40.625 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (60.156 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 40.91% β-sheet: 0.00% Coil/Unstructured: 59.09%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.61
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.61
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 128 Family Scaffolds
PF07040	DUF1326	21.09
PF09948	DUF2182	10.16
PF01035	DNA_binding_1	7.81
PF13529	Peptidase_C39_2	3.91
PF00581	Rhodanese	2.34
PF12833	HTH_18	2.34
PF03412	Peptidase_C39	0.78
PF02870	Methyltransf_1N	0.78
PF00420	Oxidored_q2	0.78
PF00571	CBS	0.78
PF14066	DUF4256	0.78

COG ID	Name	Functional Category	% Frequency in 128 Family Scaffolds
COG5588	Uncharacterized conserved protein, DUF1326 domain	Function unknown [S]	21.09
COG0350	DNA repair enzyme Ada (O6-methylguanine-DNA--protein-cysteine methyltransferase)	Replication, recombination and repair [L]	8.59
COG3695	Alkylated DNA nucleotide flippase Atl1, participates in nucleotide excision repair, Ada-like DNA-binding domain	Transcription [K]	7.81

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	81.25 %
Unclassified	root	N/A	18.75 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	81.25 %
Unclassified	root	N/A	18.75 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	81.25 %
Unclassified	root	N/A	18.75 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	64.06 %
Unclassified	root	N/A	18.75 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	3.12 %

Name	Rank	Taxonomy	Distribution
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	39.84 %
Unclassified	root	N/A	18.75 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	5.47 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1.56 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	39.84 %
Unclassified	root	N/A	18.75 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	5.47 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.78 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	39.84 %
Unclassified	root	N/A	18.75 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	4.69 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.78 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2065487018\|GPINP_F5MS3JC02IZ0V4	All Organisms → cellular organisms → Bacteria → Acidobacteria	513	Open in IMG/M
2170459017\|G14TP7Y01DIT4B	Not Available	727	Open in IMG/M
2228664022\|INPgaii200_c0674099	All Organisms → cellular organisms → Bacteria → Acidobacteria	563	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_105883002	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	10571	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_105894524	All Organisms → cellular organisms → Bacteria	4351	Open in IMG/M
3300000550\|F24TB_11788045	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	862	Open in IMG/M
3300000559\|F14TC_107707494	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	634	Open in IMG/M
3300000597\|AF_2010_repII_A1DRAFT_10022597	All Organisms → cellular organisms → Bacteria → Acidobacteria	1719	Open in IMG/M
3300000789\|JGI1027J11758_12799635	All Organisms → cellular organisms → Bacteria → Acidobacteria	1565	Open in IMG/M
3300001431\|F14TB_103381418	Not Available	757	Open in IMG/M
3300003319\|soilL2_10094978	Not Available	1081	Open in IMG/M
3300004463\|Ga0063356_100535253	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1561	Open in IMG/M
3300004633\|Ga0066395_10014794	All Organisms → cellular organisms → Bacteria	2981	Open in IMG/M
3300005295\|Ga0065707_10537953	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	730	Open in IMG/M
3300005332\|Ga0066388_100820338	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1520	Open in IMG/M
3300005332\|Ga0066388_101988961	Not Available	1041	Open in IMG/M
3300005332\|Ga0066388_106256724	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	601	Open in IMG/M
3300005332\|Ga0066388_107575177	All Organisms → cellular organisms → Bacteria → Acidobacteria	544	Open in IMG/M
3300005354\|Ga0070675_101170995	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	707	Open in IMG/M
3300005439\|Ga0070711_100303475	All Organisms → cellular organisms → Bacteria	1270	Open in IMG/M
3300005446\|Ga0066686_10262721	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1167	Open in IMG/M
3300005459\|Ga0068867_101429551	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	642	Open in IMG/M
3300005529\|Ga0070741_11670641	Not Available	519	Open in IMG/M
3300005530\|Ga0070679_100568156	Not Available	1078	Open in IMG/M
3300005535\|Ga0070684_100731761	All Organisms → cellular organisms → Bacteria → Proteobacteria	923	Open in IMG/M
3300005556\|Ga0066707_10908312	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	540	Open in IMG/M
3300005559\|Ga0066700_10676121	All Organisms → cellular organisms → Bacteria	711	Open in IMG/M
3300005713\|Ga0066905_100007058	All Organisms → cellular organisms → Bacteria	4976	Open in IMG/M
3300005713\|Ga0066905_100052924	All Organisms → cellular organisms → Bacteria → Acidobacteria	2499	Open in IMG/M
3300005764\|Ga0066903_100169490	All Organisms → cellular organisms → Bacteria → Acidobacteria	3189	Open in IMG/M
3300005764\|Ga0066903_101067843	All Organisms → cellular organisms → Bacteria	1485	Open in IMG/M
3300005764\|Ga0066903_102198984	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	1064	Open in IMG/M
3300005764\|Ga0066903_102294053	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1042	Open in IMG/M
3300005764\|Ga0066903_102336827	Not Available	1033	Open in IMG/M
3300005764\|Ga0066903_102718178	All Organisms → cellular organisms → Bacteria	960	Open in IMG/M
3300005764\|Ga0066903_103574841	All Organisms → cellular organisms → Bacteria	837	Open in IMG/M
3300005937\|Ga0081455_10430797	All Organisms → cellular organisms → Bacteria	907	Open in IMG/M
3300006194\|Ga0075427_10076234	All Organisms → cellular organisms → Bacteria → Acidobacteria	602	Open in IMG/M
3300006797\|Ga0066659_10525691	All Organisms → cellular organisms → Bacteria → Acidobacteria	952	Open in IMG/M
3300006797\|Ga0066659_10836796	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	764	Open in IMG/M
3300006806\|Ga0079220_12027503	All Organisms → cellular organisms → Bacteria → Acidobacteria	514	Open in IMG/M
3300006844\|Ga0075428_101663491	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	666	Open in IMG/M
3300006845\|Ga0075421_100624510	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1263	Open in IMG/M
3300006845\|Ga0075421_101211952	Not Available	841	Open in IMG/M
3300006846\|Ga0075430_100393925	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1143	Open in IMG/M
3300006847\|Ga0075431_101002532	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	802	Open in IMG/M
3300006854\|Ga0075425_100524133	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1364	Open in IMG/M
3300006871\|Ga0075434_100336793	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1529	Open in IMG/M
3300006871\|Ga0075434_101895677	All Organisms → cellular organisms → Bacteria → Acidobacteria	602	Open in IMG/M
3300006871\|Ga0075434_101933086	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	596	Open in IMG/M
3300006969\|Ga0075419_10199111	All Organisms → cellular organisms → Bacteria	1326	Open in IMG/M
3300009012\|Ga0066710_102360703	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	772	Open in IMG/M
3300009137\|Ga0066709_103582142	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	563	Open in IMG/M
3300009137\|Ga0066709_104544143	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	507	Open in IMG/M
3300009156\|Ga0111538_12609220	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	634	Open in IMG/M
3300009177\|Ga0105248_12694538	Not Available	567	Open in IMG/M
3300009609\|Ga0105347_1022810	All Organisms → cellular organisms → Bacteria → Acidobacteria	2158	Open in IMG/M
3300009792\|Ga0126374_10304449	Not Available	1070	Open in IMG/M
3300009792\|Ga0126374_10821492	All Organisms → cellular organisms → Bacteria → Acidobacteria	712	Open in IMG/M
3300010043\|Ga0126380_10214844	All Organisms → cellular organisms → Bacteria → Acidobacteria	1300	Open in IMG/M
3300010043\|Ga0126380_10782321	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	778	Open in IMG/M
3300010047\|Ga0126382_10034538	All Organisms → cellular organisms → Bacteria → Acidobacteria	2813	Open in IMG/M
3300010048\|Ga0126373_13134488	All Organisms → cellular organisms → Bacteria → Acidobacteria	515	Open in IMG/M
3300010358\|Ga0126370_11319277	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	677	Open in IMG/M
3300010358\|Ga0126370_12246787	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	539	Open in IMG/M
3300010358\|Ga0126370_12521476	All Organisms → cellular organisms → Bacteria → Acidobacteria	513	Open in IMG/M
3300010359\|Ga0126376_10051279	All Organisms → cellular organisms → Bacteria	2920	Open in IMG/M
3300010359\|Ga0126376_11462660	Not Available	710	Open in IMG/M
3300010359\|Ga0126376_11760203	All Organisms → cellular organisms → Bacteria → Acidobacteria	656	Open in IMG/M
3300010359\|Ga0126376_12085124	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	610	Open in IMG/M
3300010360\|Ga0126372_10767471	All Organisms → cellular organisms → Bacteria → Acidobacteria	951	Open in IMG/M
3300010361\|Ga0126378_11787140	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	699	Open in IMG/M
3300010362\|Ga0126377_10247524	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1734	Open in IMG/M
3300010362\|Ga0126377_11303771	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	798	Open in IMG/M
3300010366\|Ga0126379_11547519	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	769	Open in IMG/M
3300010366\|Ga0126379_11731966	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	729	Open in IMG/M
3300010366\|Ga0126379_11967408	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	687	Open in IMG/M
3300010366\|Ga0126379_13191417	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	549	Open in IMG/M
3300010366\|Ga0126379_13210805	Not Available	547	Open in IMG/M
3300010376\|Ga0126381_104447986	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	542	Open in IMG/M
3300010397\|Ga0134124_10131284	All Organisms → cellular organisms → Bacteria	2215	Open in IMG/M
3300010398\|Ga0126383_10088851	All Organisms → cellular organisms → Bacteria	2724	Open in IMG/M
3300010398\|Ga0126383_10899037	All Organisms → cellular organisms → Bacteria → Acidobacteria	972	Open in IMG/M
3300010401\|Ga0134121_10675637	All Organisms → cellular organisms → Bacteria → Acidobacteria	976	Open in IMG/M
3300010401\|Ga0134121_11900296	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	625	Open in IMG/M
3300011416\|Ga0137422_1007504	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2481	Open in IMG/M
3300011437\|Ga0137429_1201777	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	621	Open in IMG/M
3300011439\|Ga0137432_1132238	Not Available	796	Open in IMG/M
3300012362\|Ga0137361_11868834	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	518	Open in IMG/M
3300012469\|Ga0150984_104986429	Not Available	1009	Open in IMG/M
3300012469\|Ga0150984_107015881	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	638	Open in IMG/M
3300012922\|Ga0137394_11287300	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	594	Open in IMG/M
3300012923\|Ga0137359_11695376	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	519	Open in IMG/M
3300012948\|Ga0126375_10314332	All Organisms → cellular organisms → Bacteria	1094	Open in IMG/M
3300012948\|Ga0126375_10471325	Not Available	928	Open in IMG/M
3300012971\|Ga0126369_10526914	Not Available	1243	Open in IMG/M
3300012971\|Ga0126369_11849460	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	692	Open in IMG/M
3300012976\|Ga0134076_10592726	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	517	Open in IMG/M
3300013297\|Ga0157378_12709152	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	548	Open in IMG/M
3300014325\|Ga0163163_10455059	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1340	Open in IMG/M
3300014326\|Ga0157380_12521478	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	580	Open in IMG/M
3300015371\|Ga0132258_10021822	All Organisms → cellular organisms → Bacteria	13998	Open in IMG/M
3300015371\|Ga0132258_10894200	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2242	Open in IMG/M
3300015371\|Ga0132258_11311378	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1829	Open in IMG/M
3300015371\|Ga0132258_12135792	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1407	Open in IMG/M
3300015373\|Ga0132257_100778941	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1193	Open in IMG/M
3300015373\|Ga0132257_100866800	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1130	Open in IMG/M
3300016357\|Ga0182032_10672312	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	867	Open in IMG/M
3300018433\|Ga0066667_10858198	All Organisms → cellular organisms → Bacteria	778	Open in IMG/M
3300020580\|Ga0210403_11373649	Not Available	536	Open in IMG/M
3300021407\|Ga0210383_10355163	All Organisms → cellular organisms → Bacteria → Proteobacteria	1263	Open in IMG/M
3300021560\|Ga0126371_10218607	All Organisms → cellular organisms → Bacteria	2008	Open in IMG/M
3300021560\|Ga0126371_10847491	Not Available	1059	Open in IMG/M
3300021560\|Ga0126371_13140206	All Organisms → cellular organisms → Bacteria → Acidobacteria	559	Open in IMG/M
3300025917\|Ga0207660_11570232	Not Available	531	Open in IMG/M
3300025926\|Ga0207659_11808661	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	519	Open in IMG/M
3300026536\|Ga0209058_1359064	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	505	Open in IMG/M
3300027835\|Ga0209515_10595466	Not Available	555	Open in IMG/M
3300027880\|Ga0209481_10528942	Not Available	609	Open in IMG/M
3300027909\|Ga0209382_10080159	All Organisms → cellular organisms → Bacteria	3849	Open in IMG/M
3300027909\|Ga0209382_10151448	All Organisms → cellular organisms → Bacteria → Acidobacteria	2686	Open in IMG/M
3300027909\|Ga0209382_11321876	Not Available	729	Open in IMG/M
3300027965\|Ga0209062_1085087	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1372	Open in IMG/M
3300031231\|Ga0170824_113056941	Not Available	715	Open in IMG/M
3300031820\|Ga0307473_11358861	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	534	Open in IMG/M
3300032174\|Ga0307470_11589266	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	547	Open in IMG/M
3300032180\|Ga0307471_102989226	Not Available	600	Open in IMG/M
3300033412\|Ga0310810_11241634	All Organisms → cellular organisms → Bacteria → Acidobacteria	597	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	73.44%
Host-Associated	Host-Associated	25.78%
Engineered	Engineered	0.78%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	69.53%
Plants	Host-Associated → Plants	25.78%
Aquatic	Environmental → Aquatic	3.91%
Solid Waste	Engineered → Solid Waste	0.78%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	69.53%
Rhizosphere	Host-Associated → Plants → Rhizosphere	17.97%
Rhizoplane	Host-Associated → Plants → Rhizoplane	7.03%
Sediment	Environmental → Aquatic → Sediment	3.12%
Freshwater	Environmental → Aquatic → Freshwater	0.78%
Roots	Host-Associated → Plants → Roots	0.78%
Grass	Engineered → Solid Waste → Grass	0.78%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	53.12%
Loam	Environmental → Terrestrial → Soil → Loam	16.41%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	14.84%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	4.69%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	3.12%
Soil	Host-Associated → Plants → Rhizosphere → Soil	3.12%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	2.34%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	0.78%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.78%
Composting	Engineered → Solid Waste → Grass → Composting	0.78%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	33.59%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	14.84%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	11.72%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	10.94%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	6.25%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	4.69%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	3.12%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	3.12%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	3.12%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	2.34%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	2.34%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.56%
Contaminated	Environmental → Aquatic → Freshwater → Groundwater → Contaminated	0.78%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.78%
Unclassified	Engineered → Solid Waste → Grass → Composting → Unclassified	0.78%

Habitat	Taxonomy	Distribution
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	25.00%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	12.50%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	10.94%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	8.59%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	4.69%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	3.12%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	3.12%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	2.34%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	2.34%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	2.34%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	2.34%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	2.34%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	1.56%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.56%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	1.56%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	1.56%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	1.56%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater → Contaminated → Groundwater	0.78%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.78%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.78%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	0.78%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.78%
Sugarcane Root And Bulk Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Sugarcane Root And Bulk Soil	0.78%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.78%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	0.78%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	0.78%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	0.78%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.78%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	0.78%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.78%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.78%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.78%
Switchgrass, Maize And Mischanthus Litter	Engineered → Solid Waste → Grass → Composting → Unclassified → Switchgrass, Maize And Mischanthus Litter	0.78%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2065487018	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
2170459017	Litter degradation ZMR4	Engineered	Open in IMG/M
2228664022	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000550	Amended soil microbial communities from Kansas Great Prairies, USA - BrdU amended with acetate total DNA F2.4 TB clc assemly	Environmental	Open in IMG/M
3300000559	Amended soil microbial communities from Kansas Great Prairies, USA - control no BrdU total DNA F1.4 TC clc assemly	Environmental	Open in IMG/M
3300000597	Forest soil microbial communities from Amazon forest - 2010 replicate II A1	Environmental	Open in IMG/M
3300000789	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300001431	Amended soil microbial communities from Kansas Great Prairies, USA - BrdU F1.4TB clc assemly	Environmental	Open in IMG/M
3300003319	Sugarcane bulk soil Sample L2	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005295	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005354	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG	Host-Associated	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005446	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135	Environmental	Open in IMG/M
3300005459	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2	Host-Associated	Open in IMG/M
3300005529	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen16_06102014_R1	Environmental	Open in IMG/M
3300005530	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG	Environmental	Open in IMG/M
3300005535	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG	Environmental	Open in IMG/M
3300005556	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156	Environmental	Open in IMG/M
3300005559	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005937	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1	Host-Associated	Open in IMG/M
3300006194	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1	Host-Associated	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006846	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4	Host-Associated	Open in IMG/M
3300006847	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006969	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3	Host-Associated	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300009609	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT890	Environmental	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300011416	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT551_2	Environmental	Open in IMG/M
3300011437	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT736_2	Environmental	Open in IMG/M
3300011439	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT820_2	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300012976	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_0_1 metaG	Environmental	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300014325	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG	Host-Associated	Open in IMG/M
3300014326	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG	Host-Associated	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300021407	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300025917	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025926	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026536	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147 (SPAdes)	Environmental	Open in IMG/M
3300027835	Subsurface groundwater microbial communities from S. Glens Falls, New York, USA - GMW60B uncontaminated upgradient, 5.4 m (SPAdes)	Environmental	Open in IMG/M
3300027880	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3 (SPAdes)	Host-Associated	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300027965	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen12_06102014_R2 (SPAdes)	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300033412	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NC	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
GPINP_00528580	2065487018	Soil	MGEEKHHVSAIELWGYTSGAVNLADGDFEHLLFCIECQTLVNEFIDVLEHLPPVNPSHAA
4ZMR_03170060	2170459017	Switchgrass, Maize And Mischanthus Litter	HVPPIDLWGYTSGTVNLTDSDFEHLLFCIECQSLVSQFVEVLNQLPPVNPSQAA
INPgaii200_06740991	2228664022	Soil	MVMGEEKSHVPALELWNYTSGTGTLTDDNFVHLVCCIECQSLMNQFIDVLDGLPHVQSSYAA
INPhiseqgaiiFebDRAFT_1058830025	3300000364	Soil	MVMGEEKSHVPALELWNYTSGTGTLTDDNFVHLVCCIECQSLMNQFIDVLDGLPHVQSSYAA*
INPhiseqgaiiFebDRAFT_1058945244	3300000364	Soil	MGEEKHXVSAIELWGYTSGAVNLADGDFEHLLFCIECQTLVNEFIDVLEHLPPVNPSHAA
F24TB_117880452	3300000550	Soil	MGEEKQHVSAIELWGYTSGAVNLADGDFEHLLFCTECQTLVNEFMDVLEHLPPVNPSHAA
F14TC_1077074942	3300000559	Soil	MEAENTHVPALELWGYTSGTANLTEGHFEHLLFCLECQALVNQFIDVLDGLPPMKPSMDA
AF_2010_repII_A1DRAFT_100225973	3300000597	Forest Soil	MGDEKQHVSAIELWGYTSGAVNLADEDFEHLLFCIECQTLVNEFIDVLEHLPPVNPSHAA
JGI1027J11758_127996353	3300000789	Soil	MGEEKQHVSAIELWGYTSGAVNLADADFEHLLFCIECQTLMNEFLDVLEHLPPVNPSHAA
F14TB_1033814182	3300001431	Soil	MGEEKQHVSAIELWGYTSGAVNLADGDFEHLLFCTECQTLVNVFMDVLEHLPPVNPSHAA
soilL2_100949782	3300003319	Sugarcane Root And Bulk Soil	MGEEKPHVPVIELWGYTSGTANLTDEHFEHLLFCVDCQALVNQFIDVLDGLPPLNPSQAA
Ga0063356_1005352532	3300004463	Arabidopsis Thaliana Rhizosphere	MEAEKQHVPAIELWGYTSGTANLSEDHFEHLLLCVECQGLVDQFIDVLDGLPSVKPLPAA
Ga0066395_100147943	3300004633	Tropical Forest Soil	MGEEKQHVSAIELWGYTSGAVNLADEDFEHLLFCIECQTLVSEFIDVLEHLPPVNPSHAA
Ga0065707_105379532	3300005295	Switchgrass Rhizosphere	MGEEKQHVSAIELWGYTSGAVNLADGDFEHLLFCIECQTLVNEFIDVLEHLPPVNPSHAA
Ga0066388_1008203382	3300005332	Tropical Forest Soil	MPVKDVMGEEKLHVPAMELWGYTNGTVNLKDDDFEHLLFCIECQTLVSEFIEVLDRLPRASSSSQAA*
Ga0066388_1019889612	3300005332	Tropical Forest Soil	IDVGVQHFMGEEKQHVSAIELWGYTSGAVNLADEDFEHLLFCIECQTLVSEFIDVLEHLPPVNPSHAA*
Ga0066388_1062567242	3300005332	Tropical Forest Soil	MGEEKPHVSAIQLWGYTSGTVNLSEDDFEHLLFCIECQSLVNQFIDVLDQLPPANPTHAA
Ga0066388_1075751771	3300005332	Tropical Forest Soil	MGEEKQHVSAIELWGYTSGAVNLADEDFEHLLFCIECQTLVNEFIDVLEHLPPVNPSHAA
Ga0070675_1011709952	3300005354	Miscanthus Rhizosphere	MEAEKQHVPAVELWGYSSGTANLPEDHFAHLLFCVECQSLFDQFIDVLNTLPPAIPSQAA
Ga0070711_1003034752	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	MGEEKPHVSAIQLWGYTSGTVNLTEDDFEHLLFCTECQSLVNQFIDVLDQLPPVNPTHAA
Ga0066686_102627212	3300005446	Soil	MGTEKQHVPAIELWGYTSGTANLTDDHFEHLLFCIECQSLVDEFIDVLDRLPPINPGQAA
Ga0068867_1014295512	3300005459	Miscanthus Rhizosphere	YCMEAEKTHVPALELWGYTSGTANLTDVDFEHLLFCLECQALVNQFVDVLDGLPPVNPSLAA*
Ga0070741_116706411	3300005529	Surface Soil	MGEEKLHISAVALWGYTSGTVNLTDEDFEHLLFCIECQSLVNQFIEVLDKL
Ga0070679_1005681562	3300005530	Corn Rhizosphere	MSEKPHVPPIDLWGYTSGTVNLTDSDFEHLLFCIECQSLVSQFVEVLNQLPPVNPSQA
Ga0070684_1007317612	3300005535	Corn Rhizosphere	MSEKPHVPPIDLWGYTSGTVNLTDSDFEHLLFCIECQSLVSQFVEVLNQLPPVNPSQAA*
Ga0066707_109083122	3300005556	Soil	SFCVRVQDFMGTEKQHVPAIELWGYTSGTANLTDDHFEHLLFCIECQSLVDEFIDVLDRLPPINPGQAA*
Ga0066700_106761212	3300005559	Soil	MGEEKPHIPVIELWGYTSGTANLSDDHFEHLLFCAECQSLVNQFMDVIDGLPPMNPSQAA
Ga0066905_1000070584	3300005713	Tropical Forest Soil	MSEEKQHVSAIELWGYTSGAVNLTDEDFEHLLFCIECQTLVNEFIDVLDHLPPVNPSQAA
Ga0066905_1000529243	3300005713	Tropical Forest Soil	MGEEKQHVSAIELWGYTSGAVNLADEDFEHLLFCIECQTLVNEFIDVLDHLPPVNPSQAA
Ga0066903_1001694904	3300005764	Tropical Forest Soil	MVMGEEKSHVPALELWNYTSGTGTLTDDHFVHLVCCIECQSLMNQFIDVLDGLPHVQSSYAA*
Ga0066903_1010678432	3300005764	Tropical Forest Soil	MTEEKPHVPAMQLWEYTNGNVNLTDEDFEHLLFCIDCQTLMNEFLDVLAGLRPANPHQAA
Ga0066903_1021989843	3300005764	Tropical Forest Soil	EKQHVSAIELWGYTSGAVNLADEDFEHLLFCIECQTLVSEFIDVLEHLPPVNPSHAA*
Ga0066903_1022940531	3300005764	Tropical Forest Soil	MGEEKQHVSAIELWGYTSGAVNLEDEDFEHLLFCIECQTLVNEFIDVLEHLPPVNPSHAA
Ga0066903_1023368272	3300005764	Tropical Forest Soil	MDEEKTHVPAIELWGYTSGTANLTDEYFEHLLFCLECQSLVNQFIDVLNGLPPVNPSHAA
Ga0066903_1027181782	3300005764	Tropical Forest Soil	MGDEKPHVSAIELWGYTSGTANLTDDDFEHLLFCIECQSLVNQFIDVLDHIPPVNPSHAA
Ga0066903_1035748412	3300005764	Tropical Forest Soil	MGEEKPHVSAIQLWGYTSGTVNLSEDDFEHLLFCIECQSLVNQFIDVLDQLPPANPTRAA
Ga0081455_104307972	3300005937	Tabebuia Heterophylla Rhizosphere	MDDNPHVPPLELWGYASATSNLTEDHFTHLLFCTECQALVNQFIDVLDGLPPMKPNQAA*
Ga0075427_100762342	3300006194	Populus Rhizosphere	MGEEKQHVSAIELWGYTSGAVNLADEDFEHLLFCIECQTLVNEFLDVLEHLPPVNPSHAA
Ga0066659_105256911	3300006797	Soil	QIYMGEEKPHIPVIELWGYTSGTANLSDDHFEHLLFCAECQSLVNQFMDVIDGLPPMNPSQAA*
Ga0066659_108367962	3300006797	Soil	MREEKAHVPALELWGYTSGTANLTDDHFEHLLFCIECQSLVNQFVDVLDGLPPVNPSQAA
Ga0079220_120275031	3300006806	Agricultural Soil	HVAAIQLWGYTSGTANLTDDDFEHLLLCVECQSLVSQFIDVLDHIPPVNPSHAA*
Ga0075428_1016634912	3300006844	Populus Rhizosphere	MEAEKTHVPALELWGYTSGTANLTDVDFEHLLFCLECQALVNQFVDVLDGLPPVNPSLAA
Ga0075421_1006245102	3300006845	Populus Rhizosphere	MELWGYASGTANLVEDHFEHLLFCVDCQALVNQFVEVLDGLSQADPDSPSQAA*
Ga0075421_1012119522	3300006845	Populus Rhizosphere	MEEKQHIPAMELWGYANGAVNLKDHDLEHLLFCIECQVLVSEFIEVLGRLPRANSSQAA*
Ga0075430_1003939252	3300006846	Populus Rhizosphere	MEGESPHVPLMELWGYASGTANLVDDHFEHLLFCVDCQALVNQFVEVLDGLSQADPDSPSQAA*
Ga0075431_1010025322	3300006847	Populus Rhizosphere	MALWGYASGTANLVDDHFEHLLFCIDCQALVNQFIEVLDGLPQMNPNSPSQAA*
Ga0075425_1005241332	3300006854	Populus Rhizosphere	MDEENLHIPLAELWSYTTGTALLADAHFEHLLFCVECQSLVNQFMDVLEKLPQTNPRLAA
Ga0075434_1003367932	3300006871	Populus Rhizosphere	MGEERLHVPAMELWGYTNGTVNLTDDDFEHLLFCIECQTLVSEFIDVLDRLPRADSSPAA
Ga0075434_1018956771	3300006871	Populus Rhizosphere	MAEEKPHVPAMQLWEYTNGNVNLTDDDFEHLLFCIDCQTLMNEFLDVVAGLRPANPHQAA
Ga0075434_1019330861	3300006871	Populus Rhizosphere	MEAEKTHIPALELWGYTSGTAILTDGHFEHLLLCLECQALVNQFVDVLDGLPPMKPSMVA
Ga0075419_101991113	3300006969	Populus Rhizosphere	FMGEEKQHVSAIELWGYTSGAVNLADEDFEHLLFCIECQTLMNEFLDVLEHLPPVNPSHAA*
Ga0066710_1023607031	3300009012	Grasslands Soil	MGEEKPHVPAIELWGYTSGTATLTDDHFEHLLFCIECQSLVNQFIDVLDGLPP
Ga0066709_1035821421	3300009137	Grasslands Soil	MGTEKQHVPAIELWGYTSGTANLSDAHFEHLLCCTECLWLLDEFIHVVDALLPAPPSAVA
Ga0066709_1045441431	3300009137	Grasslands Soil	QLYVGTEKTHIPAIEWWGYTSGTSNLSADHLEHLLFCVECQCLASQFMEVIDSLPPVNPSQAA*
Ga0111538_126092202	3300009156	Populus Rhizosphere	MEAEKQHVPAIALWGYTSGTANLSEDHFEHLLLCVECQSLVDQFIDVLDGLPPV
Ga0105248_126945381	3300009177	Switchgrass Rhizosphere	MVEEKPHVPAMQLWEYTNGNLNLTDDDFEHLLFCIDCQTLMNQFLDVVAGLHPANPHQAA
Ga0105347_10228103	3300009609	Soil	MREDKDHVPPMSLWGYSSGTENLSDENLEHLLFCIECQTLVNQFMDVINGLPPMNPSQAA
Ga0126374_103044492	3300009792	Tropical Forest Soil	MGEEKQHVSAIELWGYTSGAVNLTDEDFEHLLFCIECQTLVNEFIDVLEHLPPVNPSHAA
Ga0126374_108214922	3300009792	Tropical Forest Soil	MGDEKPHVSAIELWGYTSGTVNLTDDDFQHLLFCIECQSLVNQFIDVLNHIPPVNPSHAA
Ga0126380_102148442	3300010043	Tropical Forest Soil	MSEEKQHVSALELWGYTSGAVNLTDEDFEHLLFCIECQTLVNEFIDVLDHLPPVNPSQAA
Ga0126380_107823212	3300010043	Tropical Forest Soil	MGPEKEHVPAIELWGYSSGTANLTEGHFEHLLFCIECQSLVDEFIDVLDRLTPMNRGQAA
Ga0126382_100345381	3300010047	Tropical Forest Soil	SLHSIDVGVQHFMGEEKQHVSAIELWGYTSGAVNLANEDFEHLLFCIECQTLVNEFIDVLEHLPPVNPSHAA*
Ga0126373_131344881	3300010048	Tropical Forest Soil	MEDKKPHIPAIELWSYTSGTSNLNDEHFEHLLFCVECQSLVNQFVEILDGLPPMN
Ga0126370_113192772	3300010358	Tropical Forest Soil	MGEEKQHVSAIELWGYTSGAVNLADEDFEHLLFCIECQTLVNEFIDVLDHLPPVNPSHAA
Ga0126370_122467872	3300010358	Tropical Forest Soil	MDEEKTHVPAMELWGYTSGTANLTEDSFEHLLLCVECQTLVDELIDALNGLPATKPTLAA
Ga0126370_125214762	3300010358	Tropical Forest Soil	MGEERLHVPAMELWGYTNGTVNLKDDDFEHLLFCIECQTLVSEFIEVLDRLPRASSSSQAA*
Ga0126376_100512791	3300010359	Tropical Forest Soil	LHSIDDGVQHFMGEEKQHVSAIELWGYTSGAVNLTDEDFEHLLFCIECQTLVNEFIDVLDHLSPVNPSQAA*
Ga0126376_114626601	3300010359	Tropical Forest Soil	MGEEKPHVSAIQLWGYTSGTVNLSEDDFEHLLFCIECQSLVNQFIDVLDQLPHVNPTHAA
Ga0126376_117602032	3300010359	Tropical Forest Soil	MGEEKPHVSAIELWGFTSGTANLTDDDFEHLLFCIECQSLVNQFIEVLNDIPPVNPSHAA
Ga0126376_120851242	3300010359	Tropical Forest Soil	MGEEKQHVAAIQLWGYTSGTANLTDDDFEHLLFCIECQTLLREFVEVLEGLPQTHPSPSQAA*
Ga0126372_107674711	3300010360	Tropical Forest Soil	MGEEKPHVFAIELWGYTSGTANLTDDDFEHLLFCMECQSLVNQFIDVLNHIPPVNPSHAA
Ga0126378_117871401	3300010361	Tropical Forest Soil	MGEEKPHVSAIQLWGYTSGTVNLSEDDFEHLLFCIECQSLVNQFIDVLDQLPHANPTHAA
Ga0126377_102475243	3300010362	Tropical Forest Soil	DDGVQHFMSEEKQHVSAIELWGYTSGAVNLTDEDFEHLLFCIECQTLVNEFIDVLDHLPPVNPSQAA*
Ga0126377_113037711	3300010362	Tropical Forest Soil	MGEEKPHVSAIQLWGYTSGTVNLTEDDFEHLLFCTECQSLVNQFIDVLDQLPHVNPTHAA
Ga0126379_115475191	3300010366	Tropical Forest Soil	MGEQLPHVSAMELWGYTSGTANLTDNDFEHLLFCIECQSLVNQFIEVLDGLPPANPSLAA
Ga0126379_117319661	3300010366	Tropical Forest Soil	NSMGEEKPHVSAIQLWGYTSGTVNLSEDDFEHLLFCVECQSLVNQFIDVLDQLPHANPTHAA*
Ga0126379_119674082	3300010366	Tropical Forest Soil	MGDEKPHVSAIELWGYTSGTANLTDDDFEHLLFCIECQSLVNQFIDVLNHIPPVNPSHAA
Ga0126379_131914172	3300010366	Tropical Forest Soil	MAEEKPHVPAMQLWEYTNGNVNLTDEDFEHLLFCIDCQTLMNEFLDVLAGLRPANPHQAA
Ga0126379_132108052	3300010366	Tropical Forest Soil	MGDKKSHIPVIELWSYTSGTSNLNDEHFEHLLFCVECQSLVNQFVEILDGLPPMNSSYAA
Ga0126381_1044479861	3300010376	Tropical Forest Soil	MGEEKPHVSAIELWGYTSGTANLTDDAFEHLLFCIECQSLVNQFIDVLDHI
Ga0134124_101312843	3300010397	Terrestrial Soil	MVEEKPHVPAMQLWEYTNGNLNLTDEDFEHLLFCIDCQTLMNQFLDVLAGLHPANPHQAA
Ga0126383_100888514	3300010398	Tropical Forest Soil	MGEEKPHVSAIQLWGYTSGTVNLTEDDFEHLLFCTECQSLVNQFIDVLDQLPHANPTHAA
Ga0126383_108990372	3300010398	Tropical Forest Soil	MGEEKPHVSAIELWGYTSGTANLTDDDFEHLLFCIECQSLVNQFIEVLNDIPPVNPSHAA
Ga0134121_106756372	3300010401	Terrestrial Soil	MREEKPHVPALELWGYTSGTADLGDDHFEHLLFCIECQSLMNQFIDVLNELPPVNPSQAA
Ga0134121_119002962	3300010401	Terrestrial Soil	AIGAVQDHMGDENPHIPAMDLWGYTNGTANLTDGHFEHLLFCIECQSLVNQFVEVLAGLPPVIPSQAA*
Ga0137422_10075042	3300011416	Soil	MREDKDHVPAMSLWGYSSGTENLSDENLEHLLFCIECQTLVNQFMDVINGLPPMNPSQAA
Ga0137429_12017772	3300011437	Soil	STSVRVQVYMGTEKQHVPALELWSYTSGTANLMDDHFEHLLVCIECQTLVDEFMAVLDSLRPANPSAAA*
Ga0137432_11322381	3300011439	Soil	PTARQSNICMREDKDHVPPMSLWGYSSGTENLSDENLEHLLFCIECQTLVNQFMDVINGLPPMNPSQAA*
Ga0137361_118688341	3300012362	Vadose Zone Soil	MGDENPHIPALDLWGYAGGTANLTEDHFFHLLFCIDCQALVKQFIEVLDGLPSANPSQAA
Ga0150984_1049864293	3300012469	Avena Fatua Rhizosphere	DNSHIPAMELWGYTNGNVNLTDSHFEHLLFCIECQTLVNQFMDVLDGLPPVNPTQAA*
Ga0150984_1070158811	3300012469	Avena Fatua Rhizosphere	MHVPAMELWRYTSGAANLGNDDFEHLLSCLDCQSLLNQFIEVINGLRPANPSHAA*
Ga0137394_112873002	3300012922	Vadose Zone Soil	MGDENPHIPALDLWGYAGGTANLTEDHFFHLLFCIDCQTLVNQFIEVLNGLPSANPSQAA
Ga0137359_116953761	3300012923	Vadose Zone Soil	MGDENPHIPALDLWGYAGGTANLTEDHFFHLLFCIDCQALVKQFIEVLDGLPSAN
Ga0126375_103143321	3300012948	Tropical Forest Soil	PHIFQSKYCMEEGKSHVPVSELWGYTNGTTNLTDQDFEHLLVCVECQALVNQFIEVLDGLPSMNPNQAA*
Ga0126375_104713251	3300012948	Tropical Forest Soil	MSEEKQHVSAIELWGYTSGAVNLTDEDFEHLLFCIECQTLVNEFIEVLDHLPPVNPSQAA
Ga0126369_105269141	3300012971	Tropical Forest Soil	MGEEKPHVSAIQLWGYTSGTVNLTEDDFEHLLFCTECQSLVNQFIDVLDQLP
Ga0126369_118494601	3300012971	Tropical Forest Soil	MGDQPHVSAMELWGYTSGTANLTDNDFEHLLFCIECQSLVNQFIEVLDGLPPVNPSLAA*
Ga0134076_105927261	3300012976	Grasslands Soil	MGTEKQHVPAIELWGYTSGTANLTDDHFEHLLFCIECQSPVDEFIDVLDRLPPINPGQAA
Ga0157378_127091522	3300013297	Miscanthus Rhizosphere	MEAEKPHVPAIELWGYTSGTANLTEDHFEHLLLCVECQSLVDQFIDVLDGLPCAKPSSAA
Ga0163163_104550592	3300014325	Switchgrass Rhizosphere	MEAEKQHVPAIELWGYTSGTANLSEDHFEHLLLCLECQSLVDQFIDVLDGLAPAKPSPAA
Ga0157380_125214782	3300014326	Switchgrass Rhizosphere	MEAEKPHVPAIELWGYTSGTANLTEDHFEHLLLCVECQGLVDQFIDVLDGLPSVKPLPAA
Ga0132258_100218228	3300015371	Arabidopsis Rhizosphere	MKEMAHVPAAELWGYTSGTANLTEDYFAHLLFCRECQTLMDQFIEVLNGLPPVVPSHAA*
Ga0132258_108942002	3300015371	Arabidopsis Rhizosphere	MEAEKQHVPAVELWGYSSGTANLTEDHFAHLLFCVECQSLFDQFIDVLNTLPPAIPSQAA
Ga0132258_113113783	3300015371	Arabidopsis Rhizosphere	MDEEKAHVPAIELWGYTSGTANLTDDYFEHLLFCLECQSLVNQFIDVLDGLPPVNPSHAA
Ga0132258_121357921	3300015371	Arabidopsis Rhizosphere	MEAEKQHVPAIALWGYTSGTANLSEDHFEHLLLCVECQSLVDQFIDVLDGLPPVKPSPAA
Ga0132257_1007789412	3300015373	Arabidopsis Rhizosphere	MGEEKQHVSAIELWGYTSGAVNLADADFEHLLFCIECQTLVNEFIDVLEHLPPVNPSHAA
Ga0132257_1008668002	3300015373	Arabidopsis Rhizosphere	MKEMEHVPATELWGYTSGTANLTEDYFAHLLFCRECQTLMDQFIEVLNGLPPVVPSHAA*
Ga0182032_106723122	3300016357	Soil	MAEEKPHVPAMQLWEYTNGNLNLTDDDFEHLLFCIDCQTLMNEFLDVLAGLRPANPHQAA
Ga0066667_108581982	3300018433	Grasslands Soil	MAEQRTHVPAIQLWGYTSGTVNLTDDDFEHLLVCLECQSLVNQFVDVLDRLPPVNPSHAA
Ga0210403_113736491	3300020580	Soil	MGEEAKPHVAVTDLWRYTCGTVNLPEAEFEHLVICIECQSLVSQFIDVLEQLPISKS
Ga0210383_103551633	3300021407	Soil	EKPHVSAIQLWGYTSGTVNLTEDDFEHLLFCIECQSLVNQFIDVLDQLPPANPTHAA
Ga0126371_102186071	3300021560	Tropical Forest Soil	MGEEKPHVSAIQLWGYTSGTVNLSEVDFEHLLFCIECQSLVNQFIDVLDQLPPANPTHAA
Ga0126371_108474911	3300021560	Tropical Forest Soil	FMGEEKQHVSAIELWGYTSGAVNLADEDFEHLLFCIECQTLVNEFIDVLEHLPPVNPSHA
Ga0126371_131402062	3300021560	Tropical Forest Soil	MGEEKPHVSAIELWGYTSGTANLTDDAFEHLLFCIECQSLVNQFIDVLDHIPPVNPSHAA
Ga0207660_115702322	3300025917	Corn Rhizosphere	MSEKPHVPPIDLWGYTSGTVNLTDSDFEHLLFCIECQSLVSQFVEVLNQLPPVNPS
Ga0207659_118086612	3300025926	Miscanthus Rhizosphere	KTHVPALELWGYTSGTANLTDVDFEHLLFCLECQALVNQFVDVLDGLPPVNPSLAA
Ga0209058_13590642	3300026536	Soil	VRVQDFMGTEKQHVPAIELWGYTSGTANLTDDHFEHLLFCIECQSLVDEFIDVLDRLPPINPGQAA
Ga0209515_105954662	3300027835	Groundwater	VEKSHNSGVPVQDYMGEEKPHVPATALWGYTSGTENLADEHFEHLLFCVECQFLVNQFIEVLDGLPPMKPSQAA
Ga0209481_105289422	3300027880	Populus Rhizosphere	MGEEKQHVSAIELWGYTSGAVNLADEDFEHLLFCIECQTLMNEFLDVLEHLPPVNPSHAA
Ga0209382_100801594	3300027909	Populus Rhizosphere	MEGESPHVPLMELWGYASGTANLVEDHFEHLLFCVDCQALVNQFVEVLDGLSQADPDSPSQAA
Ga0209382_101514481	3300027909	Populus Rhizosphere	MGEEKQHVSAIELWGYTSGAVNLADEDFEHLLFCIECQTLMNEFLDVLEHLPPV
Ga0209382_113218762	3300027909	Populus Rhizosphere	SIDVGVQHFMGEEKQHVSAIELWGYTSGAVNLADEDFEHLLFCIECQTLVNEFIDVLEHLPPVNPSHAA
Ga0209062_10850872	3300027965	Surface Soil	MGEEKVHIAAVALWGYTSGTVNLTDEDFEHLLFCIECQSLVNQFIEVLDKLPPANPSHAA
Ga0170824_1130569412	3300031231	Forest Soil	MGEEKPHVSAIELWGYTSGTANLKDEDFDHLLVCVECQSLVNQFIEVLDQIRPVNPSHAA
Ga0307473_113588612	3300031820	Hardwood Forest Soil	VKDVMGEEKLHVPAMELWGYTNGTVNLKDDDFEHLLFCIECQTLVSEFIEVLDRLPRTNSPSQAA
Ga0307470_115892661	3300032174	Hardwood Forest Soil	MEAEKQHVPAIELWGYTSGTANLSEDHFEHLLLCLECQSLVDQFIDVLDGLAPA
Ga0307471_1029892262	3300032180	Hardwood Forest Soil	MEEKQHIPAMELWGYTNGTVNLKDHDLEHLLFCIECQTLVSQFIEVLDRLPRANSSQAA
Ga0310810_112416341	3300033412	Soil	MAEEKPHVPAMQLWEYTNGNVNLTDDDFEHLLFCIDCQTLMNEFLDVLAGLRPANPHQAA

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F064867

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences