NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome Family F064863

Metagenome Family F064863

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F064863
Family Type Metagenome
Number of Sequences 128
Average Sequence Length 71 residues
Representative Sequence MAAILTTMLYVPAAVLLAALGLLAGVALSSFVSFGGALHPVAGLFVWWAIFYLPAAVYSGFIVPWGGRDG
Number of Associated Samples 85
Number of Associated Scaffolds 128

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 51.59 %
% of genes near scaffold ends (potentially truncated) 35.16 %
% of genes from short scaffolds (< 2000 bps) 78.91 %
Associated GOLD sequencing projects 74
AlphaFold2 3D model prediction Yes
3D model pTM-score0.41

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Bacteria (71.094 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil
(13.281 % of family members)
Environment Ontology (ENVO) Unclassified
(31.250 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(53.906 % of family members)


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Multiple Sequence Alignments

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Transmembrane (alpha-helical) Signal Peptide: No Secondary Structure distribution: α-helix: 55.10%    β-sheet: 0.00%    Coil/Unstructured: 44.90%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.41
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 128 Family Scaffolds
PF04909Amidohydro_2 19.53
PF00903Glyoxalase 9.38
PF08448PAS_4 5.47
PF12681Glyoxalase_2 4.69
PF06532NrsF 2.34
PF10604Polyketide_cyc2 2.34
PF12848ABC_tran_Xtn 1.56
PF00005ABC_tran 1.56
PF00528BPD_transp_1 1.56
PF03401TctC 0.78
PF12833HTH_18 0.78
PF09351DUF1993 0.78
PF14000Packaging_FI 0.78
PF00462Glutaredoxin 0.78

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 128 Family Scaffolds
COG4944Uncharacterized conserved proteinFunction unknown [S] 2.34
COG3181Tripartite-type tricarboxylate transporter, extracytoplasmic receptor component TctCEnergy production and conversion [C] 0.78

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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms77.34 %
UnclassifiedrootN/A22.66 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300000956|JGI10216J12902_114755054Not Available1357Open in IMG/M
3300003999|Ga0055469_10151182All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium703Open in IMG/M
3300004114|Ga0062593_101406008Not Available746Open in IMG/M
3300004114|Ga0062593_101564469All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium714Open in IMG/M
3300004463|Ga0063356_100405286All Organisms → cellular organisms → Bacteria → Proteobacteria1756Open in IMG/M
3300004463|Ga0063356_102694485All Organisms → cellular organisms → Bacteria764Open in IMG/M
3300004463|Ga0063356_106263823All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Variovorax → unclassified Variovorax → Variovorax sp. CF079510Open in IMG/M
3300004463|Ga0063356_106336916All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Variovorax → unclassified Variovorax → Variovorax sp. CF079507Open in IMG/M
3300004480|Ga0062592_100378433All Organisms → cellular organisms → Bacteria → Proteobacteria1115Open in IMG/M
3300004780|Ga0062378_10010275Not Available1604Open in IMG/M
3300005328|Ga0070676_10363000All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria998Open in IMG/M
3300005333|Ga0070677_10028868All Organisms → cellular organisms → Bacteria → Proteobacteria2099Open in IMG/M
3300005334|Ga0068869_100111887All Organisms → cellular organisms → Bacteria → Proteobacteria2078Open in IMG/M
3300005336|Ga0070680_100038522All Organisms → cellular organisms → Bacteria → Proteobacteria3866Open in IMG/M
3300005336|Ga0070680_101853751All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Variovorax → unclassified Variovorax → Variovorax sp. CF079523Open in IMG/M
3300005338|Ga0068868_101137130All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium720Open in IMG/M
3300005340|Ga0070689_100076249All Organisms → cellular organisms → Bacteria → Proteobacteria2626Open in IMG/M
3300005341|Ga0070691_10852212All Organisms → cellular organisms → Bacteria → Proteobacteria559Open in IMG/M
3300005438|Ga0070701_10946053All Organisms → cellular organisms → Bacteria → Proteobacteria598Open in IMG/M
3300005438|Ga0070701_11406822All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium502Open in IMG/M
3300005441|Ga0070700_100083563All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria2067Open in IMG/M
3300005459|Ga0068867_100398744All Organisms → cellular organisms → Bacteria1160Open in IMG/M
3300005459|Ga0068867_100560982All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium990Open in IMG/M
3300005459|Ga0068867_100674323All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria909Open in IMG/M
3300005615|Ga0070702_101190545All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium614Open in IMG/M
3300005617|Ga0068859_102062615All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium630Open in IMG/M
3300005844|Ga0068862_100111138All Organisms → cellular organisms → Bacteria → Proteobacteria2405Open in IMG/M
3300006196|Ga0075422_10065109All Organisms → cellular organisms → Bacteria → Proteobacteria1347Open in IMG/M
3300006844|Ga0075428_100523334All Organisms → cellular organisms → Bacteria → Proteobacteria1268Open in IMG/M
3300006844|Ga0075428_101128508All Organisms → cellular organisms → Bacteria → Proteobacteria827Open in IMG/M
3300006845|Ga0075421_101239329All Organisms → cellular organisms → Bacteria → Proteobacteria829Open in IMG/M
3300006845|Ga0075421_102015405All Organisms → cellular organisms → Bacteria → Proteobacteria614Open in IMG/M
3300006847|Ga0075431_102115973All Organisms → cellular organisms → Bacteria → Proteobacteria517Open in IMG/M
3300006876|Ga0079217_10056594All Organisms → cellular organisms → Bacteria → Proteobacteria1599Open in IMG/M
3300006876|Ga0079217_10294865All Organisms → cellular organisms → Bacteria → Proteobacteria895Open in IMG/M
3300006894|Ga0079215_10259629Not Available928Open in IMG/M
3300006894|Ga0079215_10410948All Organisms → cellular organisms → Bacteria → Proteobacteria804Open in IMG/M
3300006918|Ga0079216_10142287All Organisms → cellular organisms → Bacteria → Proteobacteria1236Open in IMG/M
3300006918|Ga0079216_11335005All Organisms → cellular organisms → Bacteria → Proteobacteria588Open in IMG/M
3300006918|Ga0079216_11918149Not Available512Open in IMG/M
3300007004|Ga0079218_10179499All Organisms → cellular organisms → Bacteria → Proteobacteria1587Open in IMG/M
3300007004|Ga0079218_13127500All Organisms → cellular organisms → Bacteria559Open in IMG/M
3300009087|Ga0105107_10668581All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium722Open in IMG/M
3300009094|Ga0111539_10170532All Organisms → cellular organisms → Bacteria → Proteobacteria2543Open in IMG/M
3300009094|Ga0111539_10543580Not Available1353Open in IMG/M
3300009156|Ga0111538_10130003All Organisms → cellular organisms → Bacteria → Proteobacteria3198Open in IMG/M
3300009156|Ga0111538_10695849All Organisms → cellular organisms → Bacteria → Proteobacteria1288Open in IMG/M
3300009553|Ga0105249_10713291Not Available1063Open in IMG/M
3300010040|Ga0126308_11194949All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium538Open in IMG/M
3300010045|Ga0126311_10636999All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria847Open in IMG/M
3300010399|Ga0134127_10011120All Organisms → cellular organisms → Bacteria6704Open in IMG/M
3300010399|Ga0134127_12455579All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium601Open in IMG/M
3300010400|Ga0134122_11895388All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Variovorax → unclassified Variovorax → Variovorax sp. CF079631Open in IMG/M
3300010403|Ga0134123_10258373All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium1520Open in IMG/M
3300011119|Ga0105246_11027400All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria748Open in IMG/M
3300013306|Ga0163162_10496105All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales → Symbiodiniaceae → Symbiodinium → Symbiodinium microadriaticum1352Open in IMG/M
3300013308|Ga0157375_12277096All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium646Open in IMG/M
3300014326|Ga0157380_10039203All Organisms → cellular organisms → Bacteria → Proteobacteria3683Open in IMG/M
3300014326|Ga0157380_13238102All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Variovorax → unclassified Variovorax → Variovorax sp. CF079520Open in IMG/M
3300015374|Ga0132255_102118970All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium857Open in IMG/M
3300017792|Ga0163161_10449949All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria1041Open in IMG/M
3300018422|Ga0190265_10015533All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales5902Open in IMG/M
3300018422|Ga0190265_10261761All Organisms → cellular organisms → Bacteria → Proteobacteria1782Open in IMG/M
3300018422|Ga0190265_10362934Not Available1538Open in IMG/M
3300018432|Ga0190275_10040007All Organisms → cellular organisms → Bacteria → Proteobacteria3844Open in IMG/M
3300018432|Ga0190275_11704352Not Available708Open in IMG/M
3300018465|Ga0190269_11749636All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Variovorax → unclassified Variovorax → Variovorax sp. CF079527Open in IMG/M
3300018469|Ga0190270_10684296All Organisms → cellular organisms → Bacteria1014Open in IMG/M
3300018469|Ga0190270_10707278Not Available1000Open in IMG/M
3300018469|Ga0190270_10836642All Organisms → cellular organisms → Bacteria → Proteobacteria931Open in IMG/M
3300019377|Ga0190264_10013280All Organisms → cellular organisms → Bacteria → Proteobacteria2539Open in IMG/M
3300019377|Ga0190264_11345390Not Available607Open in IMG/M
3300025167|Ga0209642_10111800All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales → Symbiodiniaceae → Symbiodinium → Symbiodinium microadriaticum1581Open in IMG/M
3300025893|Ga0207682_10018738All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria2707Open in IMG/M
3300025899|Ga0207642_10016493All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria2784Open in IMG/M
3300025901|Ga0207688_10239999Not Available1096Open in IMG/M
3300025907|Ga0207645_10052189All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria2613Open in IMG/M
3300025908|Ga0207643_10058500All Organisms → cellular organisms → Bacteria → Proteobacteria2197Open in IMG/M
3300025908|Ga0207643_10108327All Organisms → cellular organisms → Bacteria1634Open in IMG/M
3300025908|Ga0207643_10163053All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria1342Open in IMG/M
3300025917|Ga0207660_10041689All Organisms → cellular organisms → Bacteria → Proteobacteria3218Open in IMG/M
3300025917|Ga0207660_11116393All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales → Symbiodiniaceae → Symbiodinium → Symbiodinium microadriaticum642Open in IMG/M
3300025926|Ga0207659_10079417All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria2421Open in IMG/M
3300025934|Ga0207686_10715317All Organisms → cellular organisms → Bacteria797Open in IMG/M
3300025936|Ga0207670_10133029Not Available1825Open in IMG/M
3300025936|Ga0207670_11443150All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium585Open in IMG/M
3300025940|Ga0207691_10258982All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria1500Open in IMG/M
3300027360|Ga0209969_1085504All Organisms → cellular organisms → Bacteria → Proteobacteria505Open in IMG/M
3300027691|Ga0209485_1082273Not Available881Open in IMG/M
3300027735|Ga0209261_10031002Not Available1324Open in IMG/M
3300027886|Ga0209486_10221577Not Available1080Open in IMG/M
3300027886|Ga0209486_10678408Not Available662Open in IMG/M
3300027907|Ga0207428_10113529All Organisms → cellular organisms → Bacteria → Proteobacteria2082Open in IMG/M
3300027909|Ga0209382_11299744All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Nitrosomonadaceae → Nitrosospira737Open in IMG/M
3300028380|Ga0268265_10779801All Organisms → cellular organisms → Bacteria → Proteobacteria930Open in IMG/M
3300028380|Ga0268265_11774732All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium623Open in IMG/M
3300028590|Ga0247823_11027630All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Variovorax → unclassified Variovorax → Variovorax sp. CF079618Open in IMG/M
3300028592|Ga0247822_11686982All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales → Symbiodiniaceae → Symbiodinium → Symbiodinium microadriaticum539Open in IMG/M
3300028812|Ga0247825_10045095All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria2926Open in IMG/M
3300028812|Ga0247825_10049899All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales → Symbiodiniaceae → Symbiodinium → Symbiodinium microadriaticum2778Open in IMG/M
3300028812|Ga0247825_10119496All Organisms → cellular organisms → Bacteria1794Open in IMG/M
3300028812|Ga0247825_10294934Not Available1132Open in IMG/M
3300028812|Ga0247825_11016961All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Variovorax → unclassified Variovorax → Variovorax sp. CF079602Open in IMG/M
3300031548|Ga0307408_100020290All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria4484Open in IMG/M
3300031548|Ga0307408_100500055Not Available1064Open in IMG/M
3300031548|Ga0307408_101304045Not Available681Open in IMG/M
3300031548|Ga0307408_102175821Not Available536Open in IMG/M
3300031731|Ga0307405_11514966All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Variovorax → unclassified Variovorax → Variovorax sp. CF079590Open in IMG/M
3300031740|Ga0307468_100138396All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales → Symbiodiniaceae → Symbiodinium → Symbiodinium microadriaticum1538Open in IMG/M
3300031824|Ga0307413_11756215All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales → Symbiodiniaceae → Symbiodinium → Symbiodinium microadriaticum554Open in IMG/M
3300031847|Ga0310907_10775027Not Available535Open in IMG/M
3300031911|Ga0307412_10399536Not Available1118Open in IMG/M
3300031911|Ga0307412_11128893Not Available699Open in IMG/M
3300031911|Ga0307412_11577924All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Variovorax → unclassified Variovorax → Variovorax sp. CF079599Open in IMG/M
3300032000|Ga0310903_10329440All Organisms → cellular organisms → Bacteria759Open in IMG/M
3300032000|Ga0310903_10472969All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium650Open in IMG/M
3300032003|Ga0310897_10003322All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales4300Open in IMG/M
3300032005|Ga0307411_10910475Not Available782Open in IMG/M
3300032012|Ga0310902_10034574All Organisms → cellular organisms → Bacteria → Proteobacteria2358Open in IMG/M
3300032075|Ga0310890_10495862Not Available927Open in IMG/M
3300032075|Ga0310890_11615138Not Available536Open in IMG/M
3300032122|Ga0310895_10607445All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium561Open in IMG/M
3300032126|Ga0307415_100186189All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales → Symbiodiniaceae → Symbiodinium → Symbiodinium microadriaticum1634Open in IMG/M
3300032144|Ga0315910_10685252All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Nitrosomonadaceae → Nitrosospira795Open in IMG/M
3300032144|Ga0315910_11395458All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Variovorax → unclassified Variovorax → Variovorax sp. CF079546Open in IMG/M
3300033550|Ga0247829_10613871All Organisms → cellular organisms → Bacteria904Open in IMG/M


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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil13.28%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil10.94%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil9.38%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere9.38%
RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere8.59%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere7.03%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere4.69%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere3.91%
Arabidopsis Thaliana RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere3.91%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil3.12%
Corn RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere3.12%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere3.12%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil2.34%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere2.34%
Wetland SedimentEnvironmental → Aquatic → Freshwater → Wetlands → Unclassified → Wetland Sediment1.56%
Serpentine SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil1.56%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere1.56%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere1.56%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere1.56%
Freshwater SedimentEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment0.78%
Natural And Restored WetlandsEnvironmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands0.78%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil0.78%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil0.78%
SoilEnvironmental → Terrestrial → Soil → Loam → Unclassified → Soil0.78%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere0.78%
Corn, Switchgrass And Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere0.78%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere0.78%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere0.78%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300000956Soil microbial communities from Great Prairies - Kansas, Native Prairie soilEnvironmentalOpen in IMG/M
3300003999Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_TuleA_D2EnvironmentalOpen in IMG/M
3300004114Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5EnvironmentalOpen in IMG/M
3300004463Combined assembly of Arabidopsis thaliana microbial communitiesHost-AssociatedOpen in IMG/M
3300004480Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4EnvironmentalOpen in IMG/M
3300004780Wetland sediment microbial communities from St. Louis River estuary, USA, under dissolved organic matter induced mercury methylation - T0Bare1FreshEnvironmentalOpen in IMG/M
3300005328Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaGHost-AssociatedOpen in IMG/M
3300005333Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaGHost-AssociatedOpen in IMG/M
3300005334Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2Host-AssociatedOpen in IMG/M
3300005336Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaGEnvironmentalOpen in IMG/M
3300005338Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2Host-AssociatedOpen in IMG/M
3300005340Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaGEnvironmentalOpen in IMG/M
3300005341Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaGEnvironmentalOpen in IMG/M
3300005438Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaGEnvironmentalOpen in IMG/M
3300005441Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaGEnvironmentalOpen in IMG/M
3300005459Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2Host-AssociatedOpen in IMG/M
3300005615Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaGEnvironmentalOpen in IMG/M
3300005617Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2Host-AssociatedOpen in IMG/M
3300005844Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2Host-AssociatedOpen in IMG/M
3300006196Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1Host-AssociatedOpen in IMG/M
3300006844Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2Host-AssociatedOpen in IMG/M
3300006845Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5Host-AssociatedOpen in IMG/M
3300006847Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5Host-AssociatedOpen in IMG/M
3300006876Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS200EnvironmentalOpen in IMG/M
3300006894Agricultural soil microbial communities from Utah to study Nitrogen management - NC ControlEnvironmentalOpen in IMG/M
3300006918Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS100EnvironmentalOpen in IMG/M
3300007004Agricultural soil microbial communities from Utah to study Nitrogen management - NC CompostEnvironmentalOpen in IMG/M
3300009087Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 19-21cm September2015EnvironmentalOpen in IMG/M
3300009094Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)Host-AssociatedOpen in IMG/M
3300009156Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)Host-AssociatedOpen in IMG/M
3300009553Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaGHost-AssociatedOpen in IMG/M
3300010040Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot55EnvironmentalOpen in IMG/M
3300010045Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot61EnvironmentalOpen in IMG/M
3300010399Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3EnvironmentalOpen in IMG/M
3300010400Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2EnvironmentalOpen in IMG/M
3300010403Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3EnvironmentalOpen in IMG/M
3300011119Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaGHost-AssociatedOpen in IMG/M
3300012905Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S013-104B-2EnvironmentalOpen in IMG/M
3300013306Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaGHost-AssociatedOpen in IMG/M
3300013308Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaGHost-AssociatedOpen in IMG/M
3300014326Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaGHost-AssociatedOpen in IMG/M
3300015374Col-0 rhizosphere combined assemblyHost-AssociatedOpen in IMG/M
3300017792Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaGHost-AssociatedOpen in IMG/M
3300018422Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 124 TEnvironmentalOpen in IMG/M
3300018432Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 550 TEnvironmentalOpen in IMG/M
3300018465Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 ISEnvironmentalOpen in IMG/M
3300018469Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 TEnvironmentalOpen in IMG/M
3300019377Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 112 TEnvironmentalOpen in IMG/M
3300025167Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 19_2 (SPAdes)EnvironmentalOpen in IMG/M
3300025893Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025899Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300025901Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes)Host-AssociatedOpen in IMG/M
3300025907Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025908Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300025917Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025926Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025934Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025936Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025940Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300027360Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 PM (SPAdes)Host-AssociatedOpen in IMG/M
3300027691Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS100 (SPAdes)EnvironmentalOpen in IMG/M
3300027735Wetland sediment microbial communities from St. Louis River estuary, USA, under dissolved organic matter induced mercury methylation - T0Bare1Fresh (SPAdes)EnvironmentalOpen in IMG/M
3300027886Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost (SPAdes)EnvironmentalOpen in IMG/M
3300027907Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes)Host-AssociatedOpen in IMG/M
3300027909Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)Host-AssociatedOpen in IMG/M
3300028380Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300028590Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_PalmiticAcid_Day30EnvironmentalOpen in IMG/M
3300028592Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Cellulose_Day30EnvironmentalOpen in IMG/M
3300028812Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Vanillin_Day48EnvironmentalOpen in IMG/M
3300031548Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3Host-AssociatedOpen in IMG/M
3300031731Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1Host-AssociatedOpen in IMG/M
3300031740Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05EnvironmentalOpen in IMG/M
3300031824Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2Host-AssociatedOpen in IMG/M
3300031847Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D4EnvironmentalOpen in IMG/M
3300031911Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1Host-AssociatedOpen in IMG/M
3300032000Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D3EnvironmentalOpen in IMG/M
3300032003Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D1EnvironmentalOpen in IMG/M
3300032005Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1Host-AssociatedOpen in IMG/M
3300032012Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D3EnvironmentalOpen in IMG/M
3300032075Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D3EnvironmentalOpen in IMG/M
3300032122Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D4EnvironmentalOpen in IMG/M
3300032126Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2Host-AssociatedOpen in IMG/M
3300032144Garden soil microbial communities collected in Santa Monica, California, United States - Edamame soilEnvironmentalOpen in IMG/M
3300033550Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day4EnvironmentalOpen in IMG/M
3300033551Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day5EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
JGI10216J12902_11475505423300000956SoilMATIVTTMLYAPAAGLLALACFAVGIAPWSLATFGGALHPVVGLFAWWAIFWIPTAVYTAFMVPWDGRDLRPSAGPGTRAGSSARK*
Ga0055469_1015118223300003999Natural And Restored WetlandsMAAIVTTMLYVPAAALLAGLCLLAGVSIAAFFTFGGAVHPVAGLFAWWAIFFLPVAVYSGFIVHAGGRDA*
Ga0062593_10140600813300004114SoilLGIKAELRAYLLEVLGMATIVTTMLYVPAAALLAALFLFAGVPIASLVSFGHALHPVAGLAAWWTIFFVPAVVYCSFT
Ga0062593_10156446923300004114SoilMAAILTTMLYVPAAALLALLGLLAGVALSSFVSFGGALHPVAGLFVWWAIFYLPAAIYSGFIVPWGGRDVQ*
Ga0063356_10040528633300004463Arabidopsis Thaliana RhizosphereMGMATIVTTMLYVPAAALLAGVCLLAGVSLSAFFTFGGALHPVAGLFAWWAIFYLPVAVYSTFLVWGGRDA*
Ga0063356_10269448513300004463Arabidopsis Thaliana RhizosphereMATIVTTMLYVPAAGLLAALCLLVGVPVWSFASFGGALHPVAGLVVWWTIFYLPSAVYSGFIVPWGGRDG*
Ga0063356_10626382323300004463Arabidopsis Thaliana RhizosphereGMATIVTTMLYVPAAALLAGLFVVAGVPIASLVSFGHALHPVAGLAAWWAIFFVPALVYCSFTVPWDGREPRT*
Ga0063356_10633691613300004463Arabidopsis Thaliana RhizosphereIVTTMLYVPAALLLAAVCLIAGVSIYAFVTLGGSLHPVAGLFAWWAIFFVPVAVYSAFLVPWEGRGA*
Ga0062592_10037843323300004480SoilMATIVTTMLYVPAALLLAAVCLLAGVSIYAFVTLGGALHPVAGLFAWWAIFFVPIAVYSAFLVPWEGRGA*
Ga0062378_1001027533300004780Wetland SedimentMATIVTTMLYVPAAVLLAAGCLIAGASIYAFVTLGGSLHPVAGLFAWWAIFFVPVVVYSAFLVPWGGRG*
Ga0070676_1036300013300005328Miscanthus RhizosphereMAAILTTMLYVPAAALLAALCFLVGVPIASFASFGGAVHPVAGLALWWAIFYLPSAVYSGFLVPWGGRDA*
Ga0070677_1002886813300005333Miscanthus RhizosphereMATIVTTMLYVPAAGLLAALCLLVGVPVWSFASFGGALHPVAGLVVWWTIFYLPSAV
Ga0068869_10011188743300005334Miscanthus RhizosphereMAAILTTMLYVPAAALLAALCFLVGVPVASFASFGGAVHPVAGLALWWAIFYLPSAVYSGFLVPWGGRDA*
Ga0070680_10003852243300005336Corn RhizosphereMATIVTTMLYVPAAGLLAALCLLVGVPVWSFASFGGALHPVAGLVVWWAIFYLPSAVYSGFIVPWGGRDG*
Ga0070680_10185375113300005336Corn RhizosphereTIVTTMLYVPAAALLAALFLFAGVPIASLVSFGHALHPVAGLAAWWTIFFVPAVVYCSFTVPWDGRDPRT*
Ga0068868_10113713023300005338Miscanthus RhizosphereMAAILTTMLYVPAATLLAALCFLVGVPIASFASFGGAVHPVAGLALWWAIFYLPSAVYSGFLVPWGGRDA*
Ga0070689_10007624933300005340Switchgrass RhizosphereMAAILTTMLYVPAATLLAALCFLVGVPVASFASFGGAVHPVAGLALWWAIFYLPSAVYSGFLVPWGGRDA*
Ga0070691_1085221213300005341Corn, Switchgrass And Miscanthus RhizosphereKALRAYLLEVLGMATIVTTMLYVPAAGLLAALCLLVGVPVWSFASFGGALHPVAGLVVWWTIFYLPSAVYSGFIVPWGGRDG*
Ga0070701_1094605323300005438Corn, Switchgrass And Miscanthus RhizosphereLAIRKALRAYLLEVLGMAAILTTLLYVPAAVLLAVVGLLAGVALSSFVSFGGAMHPVAGLFLWWAIFYLPAAVYSGFIVPWGGRDA*
Ga0070701_1140682223300005438Corn, Switchgrass And Miscanthus RhizosphereAYLLEVLGMAAILTTMLYVPAAALLALLGLLAGVALSSFVSFGGALHPVAGLFVWWAIFYLPAAIYSGFIVPWGGRDVQ*
Ga0070700_10008356313300005441Corn, Switchgrass And Miscanthus RhizosphereTTMLYVPAAALLALLGLLAGVALSSFVSFGGALHPVAGLFVWWAIFYLPAAIYSGFIVPWGGRDVQ*
Ga0068867_10039874413300005459Miscanthus RhizosphereLGIKAELRAYLLEVLGMATIVTTMLYVPAAALLAALFLFAGVPIASLVSFGHALHPVAGLAAWWTIFFVPAVVYCSFTVPWDGRDPRT*
Ga0068867_10056098213300005459Miscanthus RhizosphereALRAYLLEVLGMAAILTTMLYVPAAVLLAALGLLAGVALSSFVSFGGALHPVAGLFVWWAIFYLPAAVYSGFIVPWDGREA*
Ga0068867_10067432313300005459Miscanthus RhizosphereKALRAYLLEVLGMAAILTTMLYVPAAALLAALCFLVGVPVASFASFGGAVHPVAGLALWWAIFYLPSAVYSGFLVPWGGRDA*
Ga0070702_10119054513300005615Corn, Switchgrass And Miscanthus RhizosphereALRAYLLEVLGMAAILTTMLYVPAAVLLAALGLLAGVALSSFVSFGGALHPVAGLFAWWAIFYLPAAVYSGFIVPWDGREA*
Ga0068859_10206261523300005617Switchgrass RhizosphereMAAILTTMLYVPAAALLALLGLLAGVALSSFVSFGGALHPVAGLFVWWAIFYLPAAVYSGFIVPWDGREA*
Ga0068862_10011113853300005844Switchgrass RhizosphereMATIVTTMLYVPAALLLAAVCLIAGVSIYAFVTLGGSLHPVAGLFAWWAIFFVPVAVYSAFLVPWEGRGA*
Ga0075422_1006510913300006196Populus RhizosphereMAAILTTMLYVPAATLLAALCFLVGVPIASFASFGGAVHPVAGLALWWAIFYLPSAVYSGFLVPW
Ga0075428_10052333423300006844Populus RhizosphereIRNALRAYLLEVLGMAAILTTMLYVPAAGLLAALGLLAGVSLASFASFGGAFHPVAGLALWWAIFYLPVAVYSGFLVPWGGRDA*
Ga0075428_10112850823300006844Populus RhizosphereMAAILTTMLYVPAAGLLAALGLLAGVSLSSFASFGGAFHPVAGLALWWAIFYLPVAVYSGFIVPWGGRDA*
Ga0075421_10123932923300006845Populus RhizosphereMAAIVTTMLYVPVAGLLAALGLLAGVSLSSFASFGGAFHPVAGLALWWAIFYLPVAVYSGFIVPWGGRDA*
Ga0075421_10201540523300006845Populus RhizosphereMAAILTTMLYVPAAGLLAALGLLAGVSLSSFASFGGAFHPVAGLALWWAIFYLPVAVYSGFLVPWGGRDA*
Ga0075431_10211597313300006847Populus RhizosphereTTMLYVPAAGLLAALGLLAGVSLSSFASFGGAFHPVAGLALWWAIFYLPVAVYSGFLVPWGGRDA*
Ga0079217_1005659423300006876Agricultural SoilMGMATIVTTMLYVPAAALLAGVCLLAGVSLSAFFTFGGALHPVAGLFAWWAIFYLPVAVYSTFLVWGSRDA*
Ga0079217_1029486523300006876Agricultural SoilLEAMGMATIVTTMLYVPAAALLAGVCLLAGISLSAFFTFGGALHPVAGLFAWWAIFYLPIAVYSVLLVWGGRDV*
Ga0079215_1025962923300006894Agricultural SoilMGMATIVTTMLYVPAAVLLAGVSLSAFFTFGVALHPVAGLFAWWVIFYLPVAVYSTFLVWGSRDA*
Ga0079215_1041094823300006894Agricultural SoilVPAAALLAGVCLLAGVAISGFFTLGGALHPVAGLFGWWAIFYVPVAAYSGFIVWGSRDL*
Ga0079216_1014228723300006918Agricultural SoilMGMATIVTTMLYVPAAVLLAGVCLLAGVSLSAFFTFGGALHPVAGLFAWWVIFYLPVAVYSTFLVWGSRDA*
Ga0079216_1133500523300006918Agricultural SoilMAAIVTTMLYVPAAALLAGVCLLAGVTLSAFFTFGGALHPVAGLLAWWGIFYVPVAVYSGFIVWGSRDV*
Ga0079216_1191814913300006918Agricultural SoilMGMATIVTTMLYVPAAALLAGVCLLAGISLSAFFTFGGALHPVAGLFAWWAIFYLPIAVYSVLLVWGGRD
Ga0079218_1017949943300007004Agricultural SoilMAAIVTTMLYVPAAALLAGVCLLAGVTLSGFFTFGGALHPVAGLFGWWAIFYVPVAVYSGFIVWGSRDL*
Ga0079218_1312750023300007004Agricultural SoilMAAIVTTMLYVPAAALLAGVCLLAGISLSAFFTFGGALHPVAGLFAWWAIFYLPIVIYSVLLVWGGRDV*
Ga0105107_1066858113300009087Freshwater SedimentTIVTTMLYFPTAALLAGVCLLAGVSISAFFTFGGALHPVAGMFAWWAIFYLPVAVYSSFIVWGGRDA*
Ga0111539_1017053213300009094Populus RhizosphereVIRNTLRAYLLEVLGMATIVTTMLYVPAALLLAAVCLLAGVSIYAFVTLGGALHPVAGLFAWWAIFFVPIAVYSAFLVPWEGRGA*
Ga0111539_1054358043300009094Populus RhizosphereMAAILTTMLYVPAAVLLAVLGLLAGVALSSFVSFGGALHPVAGLFVWWAIFYLPAAVYSGFIVPWGGR*
Ga0111538_1013000333300009156Populus RhizosphereMAAILTTMLYVPAAVLLAVLGLLAGVALSSFVSFGGAMHPVAGLFVWWAIFYLPAAVYSGFIVPWGGR*
Ga0111538_1069584923300009156Populus RhizosphereMAAILTTLLYVPVAGLLAAACFVVGVPPSSFASFGGAFHPVAGLALWWAIFYLPSAVYSGFLVPWGGRDA*
Ga0105249_1071329113300009553Switchgrass RhizosphereMAAILTTMLYVPVALLLAVLGLLAGVALSSFVSFGGALHPVAGLFAWWAIFYLPAAVYSGFIVPW
Ga0126308_1119494923300010040Serpentine SoilAAILTTMLYVPAAALLAVLCLLAGVPLASFVSFGGHFHPVAGLALWWTIFYLPTAVYSGFLVPWGGRDA*
Ga0126311_1063699933300010045Serpentine SoilMAAILTTMLYVPAAALLAVLCLLAGVPLASFVSFGGHFHPVAGLALWWMIFYLPTAVYSGFLVPWGGRDA*
Ga0134127_1001112043300010399Terrestrial SoilMAAILTTMLYVPAATLLAALGFLVGVPIASFASFGGAVHPVAGLALWWAIFYLPSAVYSGFLVPWGGRDA*
Ga0134127_1245557913300010399Terrestrial SoilGMAAILTTMLYVPAAVLLAALGLLAGVALSSFVSFGGALHPVAGLFAWWAIFYLPAAVYSGFIVPWDGRDA*
Ga0134122_1189538813300010400Terrestrial SoilLAIRKALRAYLLEVLGMAAILTTLLYVPAAVLLAALGLLAGVALSSFVSFGGAMHPVAGLFLWWAIFYLPAAVYSGFIVPWGGRDA*
Ga0134123_1025837343300010403Terrestrial SoilLLEVLGMAAILTTMLYVPAAALLAALCFLVGVPIASFASFGGAVHPVAGLALWWAIFYLPAAIYSGFIVPWGGRDVQ*
Ga0105246_1102740013300011119Miscanthus RhizosphereVPAAALLAALCFLVGVPIASFASFGGAVHPVAGLALWWAIFYLPSAVYSGFLVPWGGRDA
Ga0157296_1040682313300012905SoilAALLALLGLLAGVALSSFVSFGGALHPVAGLFVWWAIFYLPAAIYSGFIVPWGGRDVQ*
Ga0163162_1049610513300013306Switchgrass RhizosphereMAPIVTTMLYVPAAGLLAALCLLVGVPVWSFASFGGALHPVAGLVVWWTIFYLPSAVYSGFIVPWGGRDG*
Ga0157375_1227709613300013308Miscanthus RhizosphereVLGMAAILTTMLYVPAAVLLAVLGLLAGVALSSFVSFGGALHPVAGLFAWWAIFYLPAAVYSGFIVPWDGREA*
Ga0157380_1003920323300014326Switchgrass RhizosphereMAAILTTMLYVPAAALLAALCFLVGVPIPSFASFGGAVHPVAGLALWWAIFYLPSAVYSGFLVPWGGRDA*
Ga0157380_1323810213300014326Switchgrass RhizosphereLGIKAELSAYLLEVLGMATIVTTMLYVPAAALLAALFLFAGVPIASLVSFGHALHPVAGLAAWWTIFFVPAVVYCSFTVPWDGRDPRT*
Ga0132255_10211897023300015374Arabidopsis RhizosphereMAAILTTMLYVPAAVLLAVLGLLAGVALSSFVSFGGALHPVAGLFAWWAIFYLPAAVYSGFIVPWGGR*
Ga0163161_1044994923300017792Switchgrass RhizosphereMAAILTTMLYVPAAVLLAALGLLAGVALSSFVSFGGALHPVAGLFVWWAIFYLPAAVYSGFIVPWGGRDG
Ga0190265_1001553343300018422SoilMATIVTTMLYAPAAGLLAAGFVVAGVSVWSLATFAGALHPVAGLFAWWAIFFIPVAAYSSFMVPWGGREPRT
Ga0190265_1026176123300018422SoilMGMATIVTTMLYVPAAALLAGVCLLAGISVSAFFSFGGALHPVVGLFAWWAIFYLPVAAYSTFLVWGSRDA
Ga0190265_1036293433300018422SoilMGMATIVTTMLYVPAAALLAGVCLLAGVSLSAFFTFGGAVHPVLGLFAWWAIFYLPVAVYSTFLVWGGRDA
Ga0190275_1004000723300018432SoilMAAIVTTMLYVPIAALLAGACLLAGVTLSAFFTFGGALHPVAGLFAWWAIFYVPVAVYSGFIVWGSRDL
Ga0190275_1170435223300018432SoilVTTMLYVPAAALLAGVCLLAGVSISAFFTFGGAVHPVVGLFAWWAIFYLPVAVYSTFLVWGSRDA
Ga0190269_1174963623300018465SoilMAAIVTTMLYVPAAALLAGACLLAGVTLSAFFTFGGALHPVAGLFGWWAIFYVPVAVYSGFIVWGSRDL
Ga0190270_1068429613300018469SoilMATIVTTMLYAPAAVLLGGVCLIAGVSIWSLATFGGALHPVAGLFVWWAIFYVPIVVYTAVHVPWGRDPSGRAG
Ga0190270_1070727813300018469SoilMAAIVTTMLYVPAAALLAGVCLLAGVTLSGFFTFGGALHPVAGLFAWWAIFYVPVAVYSG
Ga0190270_1083664223300018469SoilMAAIVTTMLYVPAAGLLALAGLAVGIPIASLASFGGALHPVVGLVAWWAIFWIPVAIYTGFMVPWDGRDPRPDAKPVAGSGTRGGS
Ga0190264_1001328053300019377SoilMGMATIVTTMLYVPAAALLAGVCLLAGVSVSAFFSFGGALHPVVGLFAWWAIFYLPVAAYSTFLVWGSRDA
Ga0190264_1134539023300019377SoilMGMATIVTTMLYVPAAALLAGVCLLAGVSLSAFFTFGGAVHPVLGLFAWWAIFYLPIAVYSTFLVWGGRDA
Ga0209642_1011180033300025167SoilMGMATIVTTMLYVPAAALLAGVCLLAGISLSAFFTFGGALHPVAGLLAWWAIFYLPVAVYSTFLVWGSRDA
Ga0207682_1001873823300025893Miscanthus RhizosphereMATIVTTMLYVPAAGLLAALCLLVGVPVWSFASFGGALHPVAGLVVWWTIFYLPSAVYSGFIVPWGGRDVQ
Ga0207642_1001649323300025899Miscanthus RhizosphereMATIVTTMLYVPAAGLLAALCLLVGVPVWSFASFGGALHPVAGLVVWWTIFYLPSAVYSGFIVPWGGRDG
Ga0207688_1023999933300025901Corn, Switchgrass And Miscanthus RhizosphereMAAILTTMLYVPAAALLAALCFLVGVPIASFASFGGAVHPVAGLALWWAIFYLPSAVYSGFLVP
Ga0207645_1005218943300025907Miscanthus RhizosphereMAAILTTMLYVPAAALLAALCFLVGVPIASFASFGGAVHPVAGLALWWAIFYLPSAVYSGFLVPWGGRDA
Ga0207643_1005850013300025908Miscanthus RhizosphereMATIVTTMLYVPAAGLLAALCLLVGVPVWSFASFGGALHPVAGLVVWWTIFYLPSAVY
Ga0207643_1010832713300025908Miscanthus RhizosphereMAAILTTMLYVPAAALLAALCFLVGVPIASFASFGGAVHPVAGLALWWAIFYLPSAVY
Ga0207643_1016305333300025908Miscanthus RhizosphereMAAILTTMLYVPAAALLALLGLLAGVALSSFVSFGGALHPVAGLFVWWAIFYLPAAIYSGFIVPWGGRDVQ
Ga0207660_1004168923300025917Corn RhizosphereMATIVTTMLYVPAAGLLAALCLLVGVPVWSFASFGGALHPVAGLVVWWAIFYLPSAVYSGFIVPWGGRDG
Ga0207660_1111639323300025917Corn RhizosphereTIVTTMLYVPAAALLAALFLFAGVPIASLVSFGHALHPVAGLAAWWTIFFVPAVVYCSFTVPWDGRDPRT
Ga0207659_1007941743300025926Miscanthus RhizosphereMAAILTTMLYVPAAALLAALCFLVGVPVASFASFGGAVHPVAGLALWWAIFYLPSAVYSGFLVPWGGRDA
Ga0207686_1071531723300025934Miscanthus RhizosphereMATIVTTMLYVPAAGLLAALCLLVGVPVWSFASFGGALHPVAGLVVWWAIFYLPSAVYSGFIVPWGGR
Ga0207670_1013302923300025936Switchgrass RhizosphereMAAILTTMLYVPAATLLAALCFLVGVPIASFASFGGAVHPVAGLALWWAIFYLPSAVYSGFLVPWGGRDA
Ga0207670_1144315023300025936Switchgrass RhizosphereLAIRKALRAYLLEVLGMAAILTTLLYVPAAVLLAVVGLLAGVALSSFVSFGGALHPVAGLFAWWAIFYLPAAVYSGFIVPWDGREA
Ga0207691_1025898233300025940Miscanthus RhizosphereMAAILTTMLYVPAAVLLAALGLLAGVALSSFVSFGGALHPVAGLFVWWAIFYLPAAVYSGFIVPWDGREA
Ga0209969_108550423300027360Arabidopsis Thaliana RhizosphereMGMATIVTTMLYVPAAALLAGVCLLAGVSLSAFFTFGGALHPVAGLFAWWAIFYLPVAVYSTFLVWGGRDA
Ga0209485_108227313300027691Agricultural SoilMGMATIVTTMLYVPAAVLLAGVCLLAGVSLSAFFTFGGALHPVAGLFAWWVIFYLPVAVYSTFLVWGSRDA
Ga0209261_1003100223300027735Wetland SedimentMATIVTTMLYVPAAVLLAAGCLIAGASIYAFVTLGGSLHPVAGLFAWWAIFFVPVVVYSAFLVPWGGRG
Ga0209486_1022157723300027886Agricultural SoilMAAIVTTMLYVPAAALLAGVCLLAGVTLSGFFTFGGALHPVAGLFGWWAIFYVPVAVYSGFIVWGSRDL
Ga0209486_1067840813300027886Agricultural SoilMGMATIVTTMLYVPAAALLAGVCLLAGVSLSAFFTFGGALHPVAGLFAWWAIFYLPVAVYSTFLVWGSRDA
Ga0207428_1011352953300027907Populus RhizosphereVIRNTLRAYLLEVLGMATIVTTMLYVPAALLLAAVCLIAGVSIYAFVTLGGSLHPVAGLFAWWAIFFVPVAVYSAFLVPWEGRGA
Ga0209382_1129974423300027909Populus RhizosphereMAAILTTMLYVPAAGLLAALGLLAGVSLSSFASFGGAFHPVAGLALWWAIFYLPVAVYSGFLVPWGGRDA
Ga0268265_1077980123300028380Switchgrass RhizosphereMATIVTTMLYVPAALLLAAVCLIAGVSIYAFVTLGGSLHPVAGLFAWWAIFFVPVAVYSAFLVPWEGRGA
Ga0268265_1177473223300028380Switchgrass RhizosphereCAICKALRAYLLEVLGMAAILTTMLYVPAAALLALLGLLAGVALSSFVSFGGALHPVAGLFVWWAIFYLPAAIYSGFIVPWGGRDVQ
Ga0247823_1102763023300028590SoilMAAIVTTMLYVPVAGLLAALGLLAGVSLASFASFGGAFHPVAGLALWWAIFYLPVAVYSGFIVPWGGRDA
Ga0247822_1168698213300028592SoilVTTMLYVPAAALIAGACLLAGVTLSAFFTFGGALHPVAGLFAWWAIFYVPVAVYSGFIVWGSRDL
Ga0247825_1004509513300028812SoilYVPAAGLLALLCLLVGVPVWSFASFGGALHPVAGLVVWWAIFYLPSAVYSGFIVPWGGRD
Ga0247825_1004989933300028812SoilMATIVTIMLYVPAALLLALVCVAVGIPIASLASFGGALHPVAGLFAWWAIFWMPVAVYTGFLVPWGGRDPRG
Ga0247825_1011949633300028812SoilMATIVTTMLYVPAALLLAAVCHIAGVSIYAFVTLGGSLHPVAGLFAWWAIFFVPVAVYSAFLVPWEGRGA
Ga0247825_1029493423300028812SoilMAAILTTMLYVPAAGLLAALGLLAGVSLASFASFGGAFHPVAGLALWWAIFYLPAAVYSGFIVPWGGRDA
Ga0247825_1101696123300028812SoilMATIVTIMLYVPAALVLALVCVAVGIPIASLASFGGALHPVAGLFAWWAIFWMPVAVYTGFLVPWGGRDPRV
Ga0307408_10002029043300031548RhizosphereMATIVTTMLYVPAAALLAGLFVVAGVPIASLVSFGHALHPVAGLAAWWAIFFIPAAVYCGFTVPWDGREPRT
Ga0307408_10050005523300031548RhizosphereMGMATIVTTMLYVPAAALLAGLCLLAGISISAFFTFGGTLHPVAGLFAWWAIFYLPVAVYSTLLVWGGRDA
Ga0307408_10130404523300031548RhizosphereMAAIVTTMLYVPAAALLAGACLLAGVTLSAFFTFGGALHPVAGLFAWWAIFYVPIAVYSGFIVWGSRDV
Ga0307408_10217582113300031548RhizosphereIVTTMLYVPAAALLAGACLLAGVTLSAFFTFGGALHPVAGLLAWWAIFYVPVAVYSGVIVWGSRDL
Ga0307405_1151496613300031731RhizosphereMGMATIVTTMLYVPAAALLAAVCLLAGGSLSAFFTFGGALHPVAGLFAWWAIFYVPVAVYSGFIVWGSRDL
Ga0307468_10013839623300031740Hardwood Forest SoilMATIVTTLLYVPAAVLLAAMCLIAGTSIYSFVSLGGSLHPVAGLFVWWAIFYLPSAVYSGFIVPWSRHDA
Ga0307413_1175621513300031824RhizosphereYVPAAALLAGLFVVAGVPIASLVTFGHALHPVAGLAAWWAIFFIPAAVYCGFTVPWDGREPRT
Ga0310907_1077502713300031847SoilTIVTTMLYVPAAGLLAALCLLVGVPVWSFASFGGALHPVAGLVVWWTIFYLPSAVYSGFIVPWGGRDG
Ga0307412_1039953613300031911RhizosphereMATIVTTMLYVPAAALLAGLFVVAGVPIASLVSFGHALHPVAGLAAWWAIFFIPAAVYCG
Ga0307412_1112889323300031911RhizosphereMGMATIVTTMLYVPAAALLAGVCLLAGVSLSAFFTFGGALHPVAGLFAWWAIFYLPVAVYSTLLVWGGRDA
Ga0307412_1157792423300031911RhizosphereMAAIVTTMLYVPAAALLAGAGLLAGVTLSAFFTFGGALHPVAGLFAWWAIFYVPIAVYSGFIVWGSRDV
Ga0310903_1032944023300032000SoilMATIVTTMLYVPAAALLAGLFVVAGVPIESLVTFRHAVHPVAGLAAWWAIFFVPAVIYCGFTVPWDG
Ga0310903_1047296933300032000SoilLGMAAILTTMLYVPAAALLAALCFLVGVPIASFASFGGAVHPVAGLALWWAIFYLPSAVYSGFLVPWGGRDA
Ga0310897_1000332273300032003SoilMATIVTTMLYVPAALLLAAVCLIAGVSIYAFVTLGGSLHPVAGLFAWWAIFFVPVAVYSA
Ga0307411_1091047523300032005RhizosphereMGMATIVTTMLYVPAAALLAGLCLLAGVSLSAFFSFGGALHPVAGLFAWWAIFYLPVAVYSTFVVWGSRDA
Ga0310902_1003457423300032012SoilMATIVTTMLYVPAALLLAAVCLLAGVSIYAFVTLGGALHPVAGLFAWWSIFFVPIAVYSAFLVPWEGRGA
Ga0310890_1049586223300032075SoilHGAIRNTLRAYFLEVLGMATIVTTMLYVPAALLLAAVCLIAGVSIYAFVTLGGSLHPVAGLFAWWAIFFVPVAVYSAFLVPWEGRGA
Ga0310890_1161513813300032075SoilTTMLYVPAAALLAALFLFAGVPIASLVSFGHALHPVAGLAAWWTIFFVPAVVYCSFTVPWDGRDPRT
Ga0310895_1060744513300032122SoilTTMLYVPAAALLAALCFLVGVPIASFASFGGAVHPVAGLALWWAIFYLPSAVYSGFLVPWGGRDA
Ga0307415_10018618923300032126RhizosphereMGMATIVTTMLYVPAAALLAGLFVVAGVPIASLVTFGHALHPVAGLAAWWAIFFIPAAVYCGFTVPWDGREPRT
Ga0315910_1068525223300032144SoilMAAIVTTMLYVPAAALLAGVCLLAGVTLSGFFTFGGALHPVAGLFAWWAIFYVPVAVYSAFIVWGSRDL
Ga0315910_1139545823300032144SoilLPEALRMAAIVTTMLYVPAAALLAGVCLLAGVTLSGFFTFGGALHPVAGLFAWWAIFYVPVAVYSAFIVWGSRDL
Ga0247829_1061387123300033550SoilMAAIVTTMLYVPAAALIAGACLLAGVTLSAFFTFGGALHPVAGLFAWWAIFYVPVAVYSGFIVWGSRDL
Ga0247830_1089558013300033551SoilVTWAIGSALRAYLPEVLRMAAIVTTMLYVPAAALIAGACLLAGVTLSAFFTFGGALHPVAGLFAWWAIFYVPVAVYSGFIVWGSRDL

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Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
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