Metagenome / Metatranscriptome Family F064752

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F064752
Family Type	Metagenome / Metatranscriptome
Number of Sequences	128
Average Sequence Length	74 residues
Representative Sequence	VDPVQRDESEFLEHEAEPGADIIALPQLERLPPDPDGAELGGSSFTADNRSARLEALELVRAAVELADRIEKD
Number of Associated Samples	116
Number of Associated Scaffolds	128

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	100.00 %
% of genes near scaffold ends (potentially truncated)	100.00 %
% of genes from short scaffolds (< 2000 bps)	92.97 %
Associated GOLD sequencing projects	110
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.35

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Bacteria (98.438 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil (15.625 % of family members)
Environment Ontology (ENVO)	Unclassified (22.656 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (58.594 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 35.64% β-sheet: 0.00% Coil/Unstructured: 64.36%
Feature Viewer

Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.35
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.35
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 128 Family Scaffolds
PF13633	Obsolete Pfam Family	4.69
PF07963	N_methyl	4.69
PF00437	T2SSE	3.12
PF13544	Obsolete Pfam Family	2.34
PF00162	PGK	0.78
PF01066	CDP-OH_P_transf	0.78

COG ID	Name	Functional Category	% Frequency in 128 Family Scaffolds
COG0126	3-phosphoglycerate kinase	Carbohydrate transport and metabolism [G]	0.78
COG0558	Phosphatidylglycerophosphate synthase	Lipid transport and metabolism [I]	0.78
COG1183	Phosphatidylserine synthase	Lipid transport and metabolism [I]	0.78
COG5050	sn-1,2-diacylglycerol ethanolamine- and cholinephosphotranferases	Lipid transport and metabolism [I]	0.78

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	98.44 %
Unclassified	root	N/A	1.56 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	98.44 %
Unclassified	root	N/A	1.56 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	98.44 %
Unclassified	root	N/A	1.56 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	96.88 %
Unclassified	root	N/A	1.56 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	0.78 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	96.88 %
Unclassified	root	N/A	1.56 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	0.78 %

Name	Rank	Taxonomy	Distribution
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	91.41 %
Unclassified	root	N/A	1.56 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	0.78 %

Name	Rank	Taxonomy	Distribution
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	91.41 %
Unclassified	root	N/A	1.56 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	0.78 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	91.41 %
Unclassified	root	N/A	1.56 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	0.78 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000364\|INPhiseqgaiiFebDRAFT_105830317	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1239	Open in IMG/M
3300000651\|AP72_2010_repI_A10DRAFT_1036951	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	633	Open in IMG/M
3300000953\|JGI11615J12901_10274234	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	994	Open in IMG/M
3300000956\|JGI10216J12902_118591707	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	562	Open in IMG/M
3300000956\|JGI10216J12902_124348860	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	623	Open in IMG/M
3300004114\|Ga0062593_101179483	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	802	Open in IMG/M
3300005171\|Ga0066677_10478489	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	715	Open in IMG/M
3300005171\|Ga0066677_10513547	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	688	Open in IMG/M
3300005174\|Ga0066680_10366337	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	918	Open in IMG/M
3300005175\|Ga0066673_10777925	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	548	Open in IMG/M
3300005176\|Ga0066679_10109971	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1686	Open in IMG/M
3300005177\|Ga0066690_10481182	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	838	Open in IMG/M
3300005178\|Ga0066688_10094372	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1818	Open in IMG/M
3300005184\|Ga0066671_10404576	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	874	Open in IMG/M
3300005330\|Ga0070690_101046309	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	645	Open in IMG/M
3300005332\|Ga0066388_108116537	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	524	Open in IMG/M
3300005336\|Ga0070680_100100016	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2407	Open in IMG/M
3300005338\|Ga0068868_100346799	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1271	Open in IMG/M
3300005366\|Ga0070659_101859364	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	540	Open in IMG/M
3300005435\|Ga0070714_100661150	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1006	Open in IMG/M
3300005435\|Ga0070714_101945356	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	574	Open in IMG/M
3300005436\|Ga0070713_100537470	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1106	Open in IMG/M
3300005439\|Ga0070711_100305892	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1266	Open in IMG/M
3300005444\|Ga0070694_100742708	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	801	Open in IMG/M
3300005456\|Ga0070678_101683723	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	597	Open in IMG/M
3300005457\|Ga0070662_101693864	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	546	Open in IMG/M
3300005458\|Ga0070681_10818591	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	848	Open in IMG/M
3300005458\|Ga0070681_12032610	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	503	Open in IMG/M
3300005468\|Ga0070707_101535509	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	633	Open in IMG/M
3300005530\|Ga0070679_100361605	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1399	Open in IMG/M
3300005532\|Ga0070739_10126571	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1393	Open in IMG/M
3300005538\|Ga0070731_10769967	Not Available	639	Open in IMG/M
3300005542\|Ga0070732_10648801	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	642	Open in IMG/M
3300005544\|Ga0070686_100557757	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	897	Open in IMG/M
3300005552\|Ga0066701_10528035	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	728	Open in IMG/M
3300005555\|Ga0066692_10832120	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	567	Open in IMG/M
3300005557\|Ga0066704_10399024	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	914	Open in IMG/M
3300005576\|Ga0066708_10394661	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	888	Open in IMG/M
3300005614\|Ga0068856_100503947	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1232	Open in IMG/M
3300005764\|Ga0066903_101255135	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1380	Open in IMG/M
3300005764\|Ga0066903_101761126	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1182	Open in IMG/M
3300005764\|Ga0066903_102120894	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1082	Open in IMG/M
3300006032\|Ga0066696_10373308	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	930	Open in IMG/M
3300006046\|Ga0066652_100313553	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1398	Open in IMG/M
3300006046\|Ga0066652_101142623	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	738	Open in IMG/M
3300006358\|Ga0068871_101975625	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	555	Open in IMG/M
3300006578\|Ga0074059_12172786	All Organisms → cellular organisms → Bacteria	939	Open in IMG/M
3300006794\|Ga0066658_10786833	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	535	Open in IMG/M
3300006804\|Ga0079221_11646757	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	521	Open in IMG/M
3300006806\|Ga0079220_10066036	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1765	Open in IMG/M
3300007076\|Ga0075435_101843989	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	531	Open in IMG/M
3300009093\|Ga0105240_10363684	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1638	Open in IMG/M
3300009545\|Ga0105237_12669212	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	510	Open in IMG/M
3300009553\|Ga0105249_13305500	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	519	Open in IMG/M
3300010048\|Ga0126373_11028882	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	889	Open in IMG/M
3300010048\|Ga0126373_12313144	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	598	Open in IMG/M
3300010152\|Ga0126318_10645511	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	635	Open in IMG/M
3300010159\|Ga0099796_10435083	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	581	Open in IMG/M
3300010303\|Ga0134082_10293292	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	680	Open in IMG/M
3300010333\|Ga0134080_10218962	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	830	Open in IMG/M
3300010337\|Ga0134062_10758806	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	515	Open in IMG/M
3300010358\|Ga0126370_12104961	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	554	Open in IMG/M
3300010360\|Ga0126372_11788412	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	657	Open in IMG/M
3300010371\|Ga0134125_11877801	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	651	Open in IMG/M
3300010376\|Ga0126381_100284628	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2257	Open in IMG/M
3300010376\|Ga0126381_104101299	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	566	Open in IMG/M
3300010396\|Ga0134126_11590412	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	719	Open in IMG/M
3300010398\|Ga0126383_10834017	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1006	Open in IMG/M
3300010401\|Ga0134121_11266722	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	741	Open in IMG/M
3300012001\|Ga0120167_1051981	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	898	Open in IMG/M
3300012198\|Ga0137364_10195454	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1481	Open in IMG/M
3300012201\|Ga0137365_10200327	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1492	Open in IMG/M
3300012212\|Ga0150985_104126105	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	613	Open in IMG/M
3300012924\|Ga0137413_10590357	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	830	Open in IMG/M
3300012958\|Ga0164299_10117946	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1412	Open in IMG/M
3300012971\|Ga0126369_10228449	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1816	Open in IMG/M
3300012971\|Ga0126369_11143681	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	868	Open in IMG/M
3300012985\|Ga0164308_10205236	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1505	Open in IMG/M
3300012987\|Ga0164307_10018647	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3544	Open in IMG/M
3300012989\|Ga0164305_10190812	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1431	Open in IMG/M
3300012989\|Ga0164305_10960545	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	723	Open in IMG/M
3300013294\|Ga0120150_1060813	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	724	Open in IMG/M
3300013306\|Ga0163162_10196118	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2148	Open in IMG/M
3300013307\|Ga0157372_10248130	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2066	Open in IMG/M
3300013307\|Ga0157372_12603230	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	581	Open in IMG/M
3300013308\|Ga0157375_11065280	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	945	Open in IMG/M
3300014325\|Ga0163163_10968892	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	914	Open in IMG/M
3300015200\|Ga0173480_10747375	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	619	Open in IMG/M
3300015357\|Ga0134072_10062544	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1063	Open in IMG/M
3300015372\|Ga0132256_100195478	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2066	Open in IMG/M
3300016319\|Ga0182033_11069158	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	720	Open in IMG/M
3300016422\|Ga0182039_11352900	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	646	Open in IMG/M
3300017993\|Ga0187823_10327153	Not Available	540	Open in IMG/M
3300018060\|Ga0187765_10027262	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2784	Open in IMG/M
3300018431\|Ga0066655_11077859	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	560	Open in IMG/M
3300018468\|Ga0066662_11491561	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	703	Open in IMG/M
3300018482\|Ga0066669_11905919	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	553	Open in IMG/M
3300020070\|Ga0206356_10338780	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2005	Open in IMG/M
3300021560\|Ga0126371_10260494	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1851	Open in IMG/M
3300024187\|Ga0247672_1059565	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	641	Open in IMG/M
3300024249\|Ga0247676_1052947	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	662	Open in IMG/M
3300025898\|Ga0207692_10645617	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	683	Open in IMG/M
3300025929\|Ga0207664_11470644	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	603	Open in IMG/M
3300025932\|Ga0207690_11826740	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	507	Open in IMG/M
3300025939\|Ga0207665_11485589	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	539	Open in IMG/M
3300025949\|Ga0207667_11638139	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	611	Open in IMG/M
3300026023\|Ga0207677_10637471	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	939	Open in IMG/M
3300026041\|Ga0207639_12090157	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	527	Open in IMG/M
3300026300\|Ga0209027_1102769	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1021	Open in IMG/M
3300026325\|Ga0209152_10473091	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	510	Open in IMG/M
3300026527\|Ga0209059_1205561	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	665	Open in IMG/M
3300026552\|Ga0209577_10196695	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1551	Open in IMG/M
3300027725\|Ga0209178_1349956	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	553	Open in IMG/M
3300027821\|Ga0209811_10343616	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	577	Open in IMG/M
3300028812\|Ga0247825_10781337	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	689	Open in IMG/M
3300031543\|Ga0318516_10839638	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	518	Open in IMG/M
3300031682\|Ga0318560_10124331	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1352	Open in IMG/M
3300031740\|Ga0307468_100314868	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1145	Open in IMG/M
3300031744\|Ga0306918_10605546	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	859	Open in IMG/M
3300031778\|Ga0318498_10259351	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	783	Open in IMG/M
3300031779\|Ga0318566_10111080	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1349	Open in IMG/M
3300031890\|Ga0306925_11192950	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	763	Open in IMG/M
3300032044\|Ga0318558_10015148	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	3006	Open in IMG/M
3300032068\|Ga0318553_10579640	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	588	Open in IMG/M
3300032180\|Ga0307471_101930431	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	739	Open in IMG/M
3300032897\|Ga0335071_10444623	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1249	Open in IMG/M
3300033158\|Ga0335077_10929036	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	874	Open in IMG/M
3300033290\|Ga0318519_10082984	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1691	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	83.59%
Host-Associated	Host-Associated	16.41%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	82.03%
Plants	Host-Associated → Plants	16.41%
Aquatic	Environmental → Aquatic	1.56%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	82.03%
Rhizosphere	Host-Associated → Plants → Rhizosphere	8.59%
Rhizoplane	Host-Associated → Plants → Rhizoplane	6.25%
Freshwater	Environmental → Aquatic → Freshwater	1.56%
Roots	Host-Associated → Plants → Roots	1.56%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	62.50%
Loam	Environmental → Terrestrial → Soil → Loam	17.19%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	5.47%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	4.69%
Soil	Host-Associated → Plants → Rhizosphere → Soil	3.12%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	2.34%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	1.56%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	0.78%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	0.78%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.78%
Soil	Host-Associated → Plants → Rhizoplane → Soil	0.78%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	25.78%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	18.75%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	12.50%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	11.72%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	5.47%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	4.69%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	3.12%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	3.12%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	3.12%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	2.34%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	2.34%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	1.56%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	1.56%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	0.78%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	0.78%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	0.78%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.78%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	0.78%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	15.62%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	7.81%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	7.03%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	4.69%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	4.69%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	3.12%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	3.12%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	3.12%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	3.12%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	3.12%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	3.12%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	3.12%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	2.34%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	2.34%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	2.34%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	2.34%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	2.34%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	2.34%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost	1.56%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.56%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	1.56%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	1.56%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	1.56%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.56%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.56%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	0.78%
Soil	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil	0.78%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.78%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.78%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.78%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.78%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	0.78%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.78%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	0.78%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.78%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	0.78%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	0.78%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	0.78%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.78%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.78%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.78%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.78%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000651	Forest soil microbial communities from Amazon forest - Pasture72 2010 replicate I A10	Environmental	Open in IMG/M
3300000953	Soil microbial communities from Great Prairies - Kansas Corn soil	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300005171	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126	Environmental	Open in IMG/M
3300005174	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129	Environmental	Open in IMG/M
3300005175	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122	Environmental	Open in IMG/M
3300005176	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128	Environmental	Open in IMG/M
3300005177	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139	Environmental	Open in IMG/M
3300005178	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137	Environmental	Open in IMG/M
3300005184	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_120	Environmental	Open in IMG/M
3300005330	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005336	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG	Environmental	Open in IMG/M
3300005338	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2	Host-Associated	Open in IMG/M
3300005366	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG	Host-Associated	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005444	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG	Environmental	Open in IMG/M
3300005456	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG	Host-Associated	Open in IMG/M
3300005457	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG	Host-Associated	Open in IMG/M
3300005458	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005530	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG	Environmental	Open in IMG/M
3300005532	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen14_06102014_R1	Environmental	Open in IMG/M
3300005538	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1	Environmental	Open in IMG/M
3300005542	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1	Environmental	Open in IMG/M
3300005544	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG	Environmental	Open in IMG/M
3300005552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150	Environmental	Open in IMG/M
3300005555	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141	Environmental	Open in IMG/M
3300005557	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153	Environmental	Open in IMG/M
3300005576	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157	Environmental	Open in IMG/M
3300005614	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2	Host-Associated	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006032	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145	Environmental	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006358	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2	Host-Associated	Open in IMG/M
3300006578	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLMA (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006794	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107	Environmental	Open in IMG/M
3300006804	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200	Environmental	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300009093	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG	Host-Associated	Open in IMG/M
3300009545	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG	Host-Associated	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010152	Soil microbial communities from Oklahoma, USA to study soil gas exchange rates - GP-OK-ARM metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010159	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3	Environmental	Open in IMG/M
3300010303	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09182015	Environmental	Open in IMG/M
3300010333	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010337	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09082015	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300012001	Permafrost microbial communities from Nunavut, Canada - A24_80cm_12M	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012924	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300012985	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MG	Environmental	Open in IMG/M
3300012987	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MG	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300013294	Permafrost microbial communities from Nunavut, Canada - A3_65cm_0M	Environmental	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300013307	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG	Host-Associated	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300014325	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG	Host-Associated	Open in IMG/M
3300015200	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S209-509C-1 (version 2)	Environmental	Open in IMG/M
3300015357	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_5_0_1 metaG	Environmental	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300017993	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_3	Environmental	Open in IMG/M
3300018060	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_10_MG	Environmental	Open in IMG/M
3300018431	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300020070	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-1 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300024187	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK13	Environmental	Open in IMG/M
3300024249	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK17	Environmental	Open in IMG/M
3300025898	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025929	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025932	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025939	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025949	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026023	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026041	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026300	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_20cm (SPAdes)	Environmental	Open in IMG/M
3300026325	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107 (SPAdes)	Environmental	Open in IMG/M
3300026527	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_151 (SPAdes)	Environmental	Open in IMG/M
3300026552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109 (SPAdes)	Environmental	Open in IMG/M
3300027725	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200 (SPAdes)	Environmental	Open in IMG/M
3300027821	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300028812	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Vanillin_Day48	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031682	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f22	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031778	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f24	Environmental	Open in IMG/M
3300031779	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f22	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300032044	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f20	Environmental	Open in IMG/M
3300032068	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f21	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032897	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.5	Environmental	Open in IMG/M
3300033158	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.1	Environmental	Open in IMG/M
3300033290	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f15	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
INPhiseqgaiiFebDRAFT_1058303171	3300000364	Soil	VDPVQRDDSEFLEHEAEPGADIIALPQLERLPPDPDGAELGGSSFTADNRSARLEALELVRAAVELADRIERDAQETAKDRLSRTEEEVRLRRLAL
AP72_2010_repI_A10DRAFT_10369511	3300000651	Forest Soil	VDPAQRDEEQLGGHEAEPGADVIALPQLERLPPNPDFADAGAPSFTADNRSARLE
JGI11615J12901_102742341	3300000953	Soil	VDPQRDESEFLEHDAEPGADIIALPQLERLPPDPDGADPGVGPSFTSDNRSARLEALELVRAAVELADRIEKDAQETAKDRLS
JGI10216J12902_1185917072	3300000956	Soil	MDPVQRDEAEFAGHDPEPGADIIALPQLERLPPDPDGLDAGSGAAGFTADNRSARLEALELVRAAVELADRIEK
JGI10216J12902_1243488603	3300000956	Soil	VDPVQREDDFSGHEAEPGADVIALPQLERLPPNPDLLDPGAPSFTADNRSARLEALELVRAAVELADRIERDAQETAKDRLGRVE
Ga0062593_1011794831	3300004114	Soil	VDPQRDESEFLEHDSELGADIIALPQLERLPPDPDGADPGAGTSFTADNRSARLEALELVRAAVELADRIEKDAQETAKDRLSRTEEEVRLR
Ga0066677_104784893	3300005171	Soil	VESVHRDESESHGDSEPGADIIALPQLERLPPNPDVPDSGASSFTSDNRSARLEALELVR
Ga0066677_105135473	3300005171	Soil	VEPVQRDESEFQEYESEPGADIIALPQLERLPPNPDVPDAGSSSFTADNRSARLEALELVRAAV
Ga0066680_103663371	3300005174	Soil	VEPVQRDENEFQDYESEPGADIIALPQLERLPPDPDAFDAGPGSASFTADNRSARLEALELVRAAVELADRIEKDAQ
Ga0066673_107779251	3300005175	Soil	VDPVQREDGEFLANEDSEPGADIIALPQLERLPPDPDFADAAGGAASFTSDNRSARLEALELVRAAVEL
Ga0066679_101099714	3300005176	Soil	VESVHRDESESHGDSEPGADIIALPQLERLPPNPDVPDSGASSFTSDNRSARLEALELVRAAVEIADRIEKDAQETARD
Ga0066690_104811821	3300005177	Soil	VDPVQRDGGEFLEHEAELGADIIALPQLERLPPDPDAFDAGPGSASFTADNRSARLEALELVRAAVELADRIEKD
Ga0066688_100943721	3300005178	Soil	MDPVQREEDEFESVADVIALPQLERLPPNPDLPDGPGFTQDNRSARLEALELVRSAVELADRIERDAQETAKDRLTRT
Ga0066671_104045763	3300005184	Soil	VESVHRDESESHGDSEPGADIIALPQLERLPPNPDVPDSGASSFTSDNRSARLEALELVRAAVEIADRIEKDA
Ga0070690_1010463092	3300005330	Switchgrass Rhizosphere	VDPQRNESEFLEHDPEPGADIIALPQLERLPPDPDGADAGVGSSFTADNRSARLEALELVRAAVELADRIEKDAQETAKDRLSRTEE
Ga0066388_1081165372	3300005332	Tropical Forest Soil	VDPVHEGEFVEHDAEPGADIIALPQLERLPPDPDTGEAAHGATSFTSDNRSARLEALELVRAAVELA
Ga0070680_1001000165	3300005336	Corn Rhizosphere	VDPQRNESEFLEHDPEPGADIIALPQLERLPPDPDGADAGVGSSFTADNRSARLEALELVRAAVELA
Ga0068868_1003467991	3300005338	Miscanthus Rhizosphere	VDPVQRDDSEFLEHEAEPGADIIALPQLERLPPDPDGAELGGSSFTADNRSARLEALELVRAAVELADRIERDAQETAKD
Ga0070659_1018593641	3300005366	Corn Rhizosphere	VDPVQRDDSEFLEHEAEPGADIIALPQLERLPPDPDGAELGGSSFTADNRSARLEALELVRAAVELADRIERDAQETAKDRLSRTEEEVR
Ga0070714_1006611501	3300005435	Agricultural Soil	VDPVERDEAFPEHDPEPGADIIALPQLERLPPDPDIPDVGSGSSFTSDNRSARLEALELVRAAVELADRIEKDAQETARDRITRTEEEVRLRRL
Ga0070714_1019453561	3300005435	Agricultural Soil	VEPVQRDESEFQDYESEPGADIIALPQLERLPPNPDVPDAGSSSFTADNRSARLEALELVRAAVELADRIEKDAQETAKDRLARTEEEV
Ga0070713_1005374701	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	VEPVQRDESEFQDYESEPGADIIALPQLERLPPNPDVPDAGSSSFTADNRSARLEALELVRA
Ga0070711_1003058921	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	VDPVERDEAFPEHDPEPGADIIALPQLERLPPDPDIPDVGSGSSFTSDNRSARLEALELVRA
Ga0070694_1007427081	3300005444	Corn, Switchgrass And Miscanthus Rhizosphere	VDPVQRDDSEFLEHEAEPGADIIALPQLERLPPDPDGAELGGSSFTADNRSARLEALELV
Ga0070678_1016837232	3300005456	Miscanthus Rhizosphere	VDPVERDEAFPEHDPEPGADIIALPQLERLPPDPDIPDVGSGSSFTSDNRSARLEALELVRAAVELADRIEKDAQETAKDRITRTEEE
Ga0070662_1016938641	3300005457	Corn Rhizosphere	VDPAQRDESEFPGHDAEPGADIIALPQLERLPPDPDGADPGVGSSFTADNRSARLEALELVRAAVELADRIEKDAQETAKDRLSRTEEEVRL
Ga0070681_108185913	3300005458	Corn Rhizosphere	VDPQRNESEFLEHDPEPGADIIALPQLERLPPDPDGPDAGVGSSFTADNRSARLEALELVRAAVELADR
Ga0070681_120326101	3300005458	Corn Rhizosphere	VESVHRDESEVHGDSEPGADIIALPQLERLPPNPDVPDSGASSFTSDNRSARLEALELVRAAVEIADRIEKDAQETARDRLTRTEEEVRL
Ga0070707_1015355093	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	VHPVAREEGELRHEADPVADVIALPQLERLPPNPDAPDGGSGFTSDNRSARLEALELVRAAVELADRIERDAQ
Ga0070679_1003616051	3300005530	Corn Rhizosphere	VESVHRDESEFHGDSEPGADIIALPQLERLPPNPDVPDSGASSFTSDNRSARLEALELVRAAVEIADRIEKDA
Ga0070739_101265711	3300005532	Surface Soil	VEPVQRDEDELRGHEPQPVADVIALPQLERLPPNPDVPEPSGPSFTVDSRSARLEALELVRA
Ga0070731_107699673	3300005538	Surface Soil	VDPVHSDEGEVLGHQPDSVADVIPLPQWERLPPNPDVPDSGAGSSSFTSDSRSARLEALELVRAAVELADRIERDAQETAKD
Ga0070732_106488011	3300005542	Surface Soil	VEPVHRNEEELGGHDAESVADVIALPQLERLPANPDGFDLGSGAVLAADNRSARLEALELMRTAVELADRIERDAHETAKDRLARTEEEIRLRRLSIDEREIALDHSR
Ga0070686_1005577571	3300005544	Switchgrass Rhizosphere	VDPVQRDDSEFLEHEAEPGADIIALPQLERLPPDPDGAELGGSSFTADNRSARLEALELVRAAVELADRIERDAQETAKDRLSRTEEEVRLR
Ga0066701_105280353	3300005552	Soil	VDPVQRDESEFLGQDAEPGADIIALPQLERLPPDPDGADSGGGSSFTADTRSARLEALELVRAAVELADRIEKDAQETAKDRLSRTEEEVRLRRLALD
Ga0066692_108321201	3300005555	Soil	VEPVQRDESEFQEYESEPGADIIALPQLERLPPNPDVPDAGSSSFTADNRSARLEALELVRAAVELADRIEKDAQ
Ga0066704_103990243	3300005557	Soil	VAREEGELRHEHESVADVIALPQLERLPPNPDGPDPGTSFTADNRSARLEALELVRAAVELADRIERDAQETAKDRLTRTEEEVRLRR
Ga0066708_103946613	3300005576	Soil	VESVHRDESESHGDSEPGADIIALPQLERLPPNPDVPDSGASSFTSDNRSARLEALELVRAAVEIADRIEKDAQ
Ga0068856_1005039471	3300005614	Corn Rhizosphere	VDPVQRDDSEFLEHEAEPGADIIALPQLERLPPDPDGAELGGSSFTADNRSARLEALELVRAAVEL
Ga0066903_1012551354	3300005764	Tropical Forest Soil	VDPVHEGEFVEHDAEPGADIIALPQLERLPPDPDVGDAATGATSFTADNRSARLEALELVRAA
Ga0066903_1017611263	3300005764	Tropical Forest Soil	VDPAQRDEEQFGSHEAEPGADVIALPQLERLPPNPDFTDAGAPSFTADNRSARLEALELVRAAVE
Ga0066903_1021208941	3300005764	Tropical Forest Soil	VDPVQSEEEFREHEAEPGADIIALPQLERLPPNPDVAEAAATAGFTADNRSARLEALELVRAAVELADRIER
Ga0066696_103733083	3300006032	Soil	VDPVHEGEYLEPASEPGADIIALPQLERLPPNPDGDAGAASFTADNRSARLEALELVRAAVELADRIEKDAQETSKDRL
Ga0066652_1003135534	3300006046	Soil	VDPVQRDESEFLEHEAEPGADIIALPQLERLPPDPDGADLGGGSSFTADNRSARLEALELVRAAVELADRIERDAQETAKDRL
Ga0066652_1011426231	3300006046	Soil	VEPVQREEEELSGHEAQPGADVIALPQLERLPPNPDFPDAGAPSFTSDNRSARLEALELVRAAVELADRIERDAQETAKDRLARVEEEIRLRKLASDEREVAL
Ga0068871_1019756252	3300006358	Miscanthus Rhizosphere	MDPVQRDEAEFQHDPEPGADIIALPQLERLPADPDGLDSGSGSVGFTTDNRSARLEALELVRAAVELADRIEKDSQETAKDRLT
Ga0074059_121727863	3300006578	Soil	VDPAQREGEFRENEEPIADVIALPQLERLPPNPDGLDPGASFTADNRSARLEALELVRAAVELADRIERDAQETAKDRITRTEEEVR
Ga0066658_107868332	3300006794	Soil	VDPVQRDESEFLGQDAEPGADIIALPQLERLPPDPDGADLGGGSSFTADTRSARLEALELVRAAVELADRIEKDAQ
Ga0079221_116467572	3300006804	Agricultural Soil	VEPVQREESEFQGHESEPGADIIALPQLERLPPNPDVPDSGSSSFTADNRSARLEALELVRAAVELADRIERDAQE
Ga0079220_100660364	3300006806	Agricultural Soil	VDPVQRDDGEFLANEDSEPGADIIALPQLERLPPDPDFADAAAGAASFTSDNRSARLEALELVRAAVELADRIEKDAQE
Ga0075435_1018439891	3300007076	Populus Rhizosphere	VQRDEAEFLGHESEPEPGADIIALPQLERLPADPDLLDAGAGSASFTSDNRSARLEALELVRAAVELADRIEKDAQE
Ga0105240_103636844	3300009093	Corn Rhizosphere	VDPVAREEGELRHEADPVADVIALPQLERLPPNPDAPDGGSGFTSDNRSARLEALELVRAAVELADRIERDAQETAKD
Ga0105237_126692121	3300009545	Corn Rhizosphere	VDPVAREEGELRHEADPVADVIALPQLERLPPNPDAPDGGSGFTSDNRSARLEALEL
Ga0105249_133055001	3300009553	Switchgrass Rhizosphere	VDPVQRDDSEFLEHEAEPGADIIALPQLERLPPDPDGAELGGSSFTADNRSARLEALELVRAAVELADRIERDAQETAKDRLS
Ga0126373_110288823	3300010048	Tropical Forest Soil	LRGVSGGEVDPVAREEDELRSDELGADVIALPQLERLPPNPDGDPGPGFTADNRSARLEALELVRAAVELADRIERDA
Ga0126373_123131441	3300010048	Tropical Forest Soil	VDPVQREEGEFLGEEELAPGADVIALPQLERLPPNPDVPDSGGAAGFTADSRSARLEALELVRAAVELADRIERDAQET
Ga0126318_106455113	3300010152	Soil	VEPVHRNEEERRGHDSEPGADVIALPQLEQLPANPDGLDVGTGAASIAGDNRSARLEALELIRNAVELADRIE
Ga0099796_104350833	3300010159	Vadose Zone Soil	VDPVQRDESEFLEHEAGPGADIIALPQLERLPPDPDGADPGAGSSFTADTRSARLEAL
Ga0134082_102932921	3300010303	Grasslands Soil	VEPVQRDESEFQEYESEPGADIIALPQLERLPPNPDVPDAGSSSFTADNRSARLEALELVRAAVELADRIEKDAQETAKD
Ga0134080_102189623	3300010333	Grasslands Soil	VDPVQRDESEFLGQDAEPGADIIALPQLERLPPDPDGADLGGGSSFTADTRSARLEALELVRAAV
Ga0134062_107588062	3300010337	Grasslands Soil	MDPVQRDEAEFQHDPEPGADIIALPQLERLPPDPDGLDAGSGSAGFTTDNRSARLEALELVRAAVELADRIEKD
Ga0126370_121049611	3300010358	Tropical Forest Soil	MQSDEGQPLGNEAEPGADVIALPQLERLPPNPDAPDGGTGFTSDNRSARLEALELVRAAVELADRIERDAQ
Ga0126372_117884123	3300010360	Tropical Forest Soil	VDPVQNDDEIREHEAEPGADIIALPQLERLPPNPDVSEAGGAAGFTADSRSARLEALELVRAAVELADRIERDAQETA
Ga0134125_118778013	3300010371	Terrestrial Soil	VESAHRDEREFHGDSEPGADIIALPQLERLPPNPDVPDAGGPGFTSDNRSARLEA
Ga0126381_1002846281	3300010376	Tropical Forest Soil	VDPVQSEEEFREHEAEPGADIIALPQLERLPPNPDVAEAAGAAGFTADSRSARLEALELVRAAVELADRI
Ga0126381_1041012991	3300010376	Tropical Forest Soil	VDPVQSEDEFREHEAEPGADIIALPQLERLPPNPDVAEAGGNAAGFTADNRSARLEALELVRAAVEL
Ga0134126_115904123	3300010396	Terrestrial Soil	VESAHRDESEFHGDSEPGADIIALPQLERLPPNPDVPDSGASSFTSDNRSAR
Ga0126383_108340173	3300010398	Tropical Forest Soil	VSGSEVDPVAREEDELRSDELGADVIALPQLERLPPNPDGDPGTGFTADNRSARLEALELVRAAVELADRIE
Ga0134121_112667221	3300010401	Terrestrial Soil	VDPVERDEAFPEHDPEPGADIIALPQLERLPPDPDIPDVGSGSSFTSDNRSARLEALELVRAAVELADRIEKDAQETAKDRITRTEEEVRLRRLA
Ga0120167_10519811	3300012001	Permafrost	VDPVQKDEAEFLGHEAEPGADIIALPQLERLPPNPDIADAGAGSSSFTADNRSARLEALELVRAAVELADRLG
Ga0137364_101954545	3300012198	Vadose Zone Soil	VDPVQRDESEFLEHEAEPGADIIALPQLERLPPDPDGAELGGSSFTADNRSARLEALELV
Ga0137365_102003274	3300012201	Vadose Zone Soil	MEPVQRDEAGFQHDPEPGADIIALPQLERLPPDPDGLDAGSGSAGFTTDNRSARLEALELVRAAVELAD
Ga0150985_1041261053	3300012212	Avena Fatua Rhizosphere	VDPVQRDEREFPEHDAELGADIIALPQLERLPPDPDGAELGGSSFTADNRSARLEALELVRAAVELADRIEKDAQETAK
Ga0137413_105903574	3300012924	Vadose Zone Soil	VDPAQRDESEFLEHEAGPGADIIALPQLERLPPDPDGADPGAGSSFTADNRSARLEALEL
Ga0164299_101179464	3300012958	Soil	MDPAQRDEGAFLGHDPEPGADIIALPQLERLPPDPDSLDTSSVGAGFTSDNRSARLEALELVRAAVEIADRIEKDAQE
Ga0126369_102284495	3300012971	Tropical Forest Soil	VHEGEFAGQDPEPGADIIALPQLERLPPNPDVDAGAASFTADNRSARLEALELVRAAVELADRIEKD
Ga0126369_111436811	3300012971	Tropical Forest Soil	VDPVQSEEEFREHEAEPGADIIALPQLERLPPNPDVAEAAATAGFTADNRSARLEA
Ga0164308_102052361	3300012985	Soil	MDPVQRDEAEFQHDPEPGADIIALPQLERLPADPDGLDSGSGSVGFTTDNRSARLEALELVRA
Ga0164307_100186476	3300012987	Soil	VDPAQRDEGEFLGHDPEPGADIIALPQLERLPPDPDSLDTSSGAAGFTSDNRSARLEALELVRAAVEIADRIEKDAQETAKDRL
Ga0164305_101908124	3300012989	Soil	MDPAQRDEGAFLGHDPEPGADIIALPQLERLPPDPDSLDASSGGAGFTSDNRSARLEALELVRAAVEIADRIEKDAQETAKDRLTRTEE
Ga0164305_109605451	3300012989	Soil	VESVHRDESEFHGDSEPGADIIALPQLERLPPNPDVPDSGASSFTSDNRSARLEALELVRAAVEIADRIEKDAHETAKDRLARTEEEVR
Ga0120150_10608131	3300013294	Permafrost	VDPVQKDEAEFLGHEAEPGADIIALPQLERLPPNPDIADAGAGSSSFTADNRSARLEALELVRAAVE
Ga0163162_101961185	3300013306	Switchgrass Rhizosphere	VDPVQRDDSEFLEHEAEPGADIIALPQLERLPPDPDGAELGGSSFTADNRSARLEALELVRAAVELV
Ga0157372_102481301	3300013307	Corn Rhizosphere	VDPVAREEGELRHEADPVADVIALPQLERLPPNPDAPDGGSGFTSDNRSARLEALELVRAAVELADRIERDAQETAKDRLTRTEEEVRL
Ga0157372_126032303	3300013307	Corn Rhizosphere	VDPVQRDEGEFLEHDSELGADIIALPQLERLPPNPDAPDAGTGSGSFTADNRSARLEALELVRAAVELADRIE
Ga0157375_110652801	3300013308	Miscanthus Rhizosphere	VDPVQRDDSEFLEHEAEPGADIIALPQLERLPPDPDGAELGGSSFTADNRSARLEALELVRAAVELADRIERDAQETAKDR
Ga0163163_109688921	3300014325	Switchgrass Rhizosphere	VDPVAREEGELRHEADPVADVIALPQLERLPPNPDALDGGPGFTSDNRSARLEALELVRAAVELADRIERD
Ga0173480_107473753	3300015200	Soil	VDPVQRDDSEFLEHEAEPGADIIALPQLERLPPDPDGAELGGSSFTADNRSARLEALELVRAAVELADR
Ga0134072_100625443	3300015357	Grasslands Soil	VDPVQRDGGEFLEHEVELGADIIALPQLERLPPDPDAFDAGPGSASFTADNRSARLEALELARAAVELADRIEK
Ga0132256_1001954785	3300015372	Arabidopsis Rhizosphere	VDPVQRDDSEFLEHEAEPGADIIALPQLERLPPDPDGAELGGSSFTADNRSARLEALELVRAAVELADRIERDAQETAKDRLSRTE
Ga0182033_110691583	3300016319	Soil	VAREEGELRSEELGADVIALPQLERLPPNPDGDAGGSFTADNRSARLEALELVRAAVELADRIERDAQET
Ga0182039_113529001	3300016422	Soil	VDPVASEEGELRSEELGADVIALPQLERLPPNPDGDAGNSFTSDNRSARLEALELVRAAVELAD
Ga0187823_103271531	3300017993	Freshwater Sediment	VDPVHSEEGEVLGHQPDPVADVIPLPQWERLPPNPDGPDSSAGSSSFTSDSRSARLEALELVRAAVELADRIERDAQ
Ga0187765_100272625	3300018060	Tropical Peatland	VDPVHRDEEEFQGHEPDPVADVIPLPQLERLPPDPDGSPDLGPGFTADNRSARLEALELVRAA
Ga0066655_110778592	3300018431	Grasslands Soil	VESVHRDESEFHGDSEPGADIIALPQLERLPPNPDVPDSGASSFTSDNRSARLDALELVRAAVEIAD
Ga0066662_114915611	3300018468	Grasslands Soil	VDPVQRDDGQFLEQEQEPGADIIALPQLERLPPNPDVPDGGAPGFTSDNRSARLEALELVRAAVELADRIERDAQETSKDRLARTEEEVRLRRL
Ga0066669_119059192	3300018482	Grasslands Soil	VESVHRDESEFHGDSEPGADIIALPQLERLPPNPDVPDSGASSFTSDNRSARLEALELVRAAVEIADRIEKDAQETARDRLT
Ga0206356_103387801	3300020070	Corn, Switchgrass And Miscanthus Rhizosphere	VDPVQRDESEFLEHEAEPGADIIALPQLERLPPDPDGAELGGSSFTADNRSARLEALELVRAAVELADRIEKD
Ga0126371_102604944	3300021560	Tropical Forest Soil	VDPVQSEEEFREHEAEPGADIIALPQLERLPPNPDVAEAAATAGFTADNRSARLEALELVRAAVELADRIERDAQET
Ga0247672_10595651	3300024187	Soil	VDPQRNESEFLEHDPEPGADIIALPQLERLPPDPDGADAGVGSSFTADNRSARLEALELVRAAVELADRIEKDA
Ga0247676_10529471	3300024249	Soil	VHPVAREEGELRHEADPVADVIALPQLERLPPNPDAPDGGSGFTSDNRSARLEALELVRAAVELADR
Ga0207692_106456171	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	VDPVQHEGEWHDAELGADIIALPQLERLPPNPDVDAGAGAASFTQDNRSARLEALELVRAAVELADRIERDAQ
Ga0207664_114706442	3300025929	Agricultural Soil	MDPVQREDNEFEPVADVIALPQLERLPPNPDLPDSPGFTQDNRSARLEALELVRAAVELADRIERDAQETAKDRLTRTEEEVRLRRL
Ga0207690_118267401	3300025932	Corn Rhizosphere	VDPVQRDDSEFLEHEAEPGADIIALPQLERLPPDPDGAELGGSSFTADNRSARLEALELVRAAVELADRIERDAQETAKDRLSRT
Ga0207665_114855891	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	VDPVQREEEEFSGHQVEPGADVIALPQLERLPPNPDFPDAGAPSFTSDNRSARLEALE
Ga0207667_116381391	3300025949	Corn Rhizosphere	VDPVQRDDSEFLEHEAEPGADIIALPQLERLPPDPDGAELGGSSFTADNRSARLEALELVRAAVELADRIERDAQETA
Ga0207677_106374711	3300026023	Miscanthus Rhizosphere	VDPVQRDDSEFLEHEAEPGADIIALPQLERLPPDPDGAELGGSSFTADNRSARLEALELVRAAVELADRIERDAQETAKDRLSRTEEE
Ga0207639_120901572	3300026041	Corn Rhizosphere	VESVHRDESEVHGDSEPGADIIALPQLERLPPNPDVPDSGASSFTSDNRSARLEALELVRAAVEIADRIEKDA
Ga0209027_11027691	3300026300	Grasslands Soil	VESVHRDESEFHGDSEPGADIIALPQLERLPPNPDVPDSGASSFTSDNRSARLEALELVRAAVEIADRIEKDAQETAR
Ga0209152_104730911	3300026325	Soil	VESVHRDESESHGDSEPGADIVALPQLERLPPNPDVPDSGASSFTSDNRSARLEALELVRAAVEIADRIEKDAQETARD
Ga0209059_12055611	3300026527	Soil	VDPVQRDEGEFLEHEAEPGADIIALPQLERLPPDPDAFDAGPGSASFTADNRSARLEALELVRAAVELADRIE
Ga0209577_101966954	3300026552	Soil	VESVHRDESEPHGDSEPGADIIALPQLERLPPNPDVPDSGASSFTSDNRSARLEALE
Ga0209178_13499561	3300027725	Agricultural Soil	VAREEGELRHEAEPVADVIALPQLERLPPNPDLPDSGSSFTADNRSARLEALELVRAAVELADRIERD
Ga0209811_103436162	3300027821	Surface Soil	VDPVQRDDSEFLEHEAEPGADIIALPQLERLPPDPDGAELGGSSFTADNRSARLEALELVRAAVELADRIERD
Ga0247825_107813371	3300028812	Soil	VDPVQRDDSEFLEHEAEPGADIIALPQLERLPPDPDGAELGGSSFTADNRSARLEALELVRAAVELADRIERDAQE
Ga0318516_108396382	3300031543	Soil	VDPVHEGEFVEHDPEPGADIIALPQLERLPPNPDVDAGAASFTADNRSARLEALELV
Ga0318560_101243314	3300031682	Soil	VAREEGELRSEELGADVIALPQLERLPPNPDGDAGGSFTADNRSARLEALELVRAAVEL
Ga0307468_1003148683	3300031740	Hardwood Forest Soil	VDAVRDEGELRHEAEPGADVIALPQLERLPPDPDGADAGPASFTADNRSARLEALELVRSAVELADRIERDAQETAKDRITRTEE
Ga0306918_106055461	3300031744	Soil	VDPVASEEGELRSEELGADVIALPQLERLPPNPDGDAGGSFTADNRSARLEALELVRAAVELADRIERDAQET
Ga0318498_102593513	3300031778	Soil	VAREEGELRSEELGADVIALPQLERLPPNPDGDAGGSFTADNRSARLEALELVRAAVELADRIER
Ga0318566_101110804	3300031779	Soil	VAREEGELRSEELGADVIALPQLERLPPNPDGDAGGSFTADNRSARLEALELVRAAVELADRIERDAQE
Ga0306925_111929503	3300031890	Soil	VDPVHEGEFVEHDPEPGADIIALPQLERLPPNPDVDAGAASFTADNRSARLEALELVR
Ga0318558_100151486	3300032044	Soil	VAREEGELRSEELGADVIALPQLERLPPNPDGDAGNSFTSDNRSARLEALELVRAAVELADRIERDAQE
Ga0318553_105796403	3300032068	Soil	VDPVHEGEFVEHDPEPGADIIALPQLERLPPNPDVDAGAASFTADNRSARLEA
Ga0307471_1019304313	3300032180	Hardwood Forest Soil	VDPAQREDGEFPEQDQEPGADIIALPQLERLPPNPDVPDVGGPGFTSDNRSARLE
Ga0335071_104446233	3300032897	Soil	VQRDEGELRHDELGADVIALPQLERLPPNPDAPDGPSSFTADNRSARLEALELVRAAVELADRIERDAQETARDRLSRTEEEV
Ga0335077_109290361	3300033158	Soil	VDPVHSDEEEFRGHEPEPVADVIALPQLERLPPDPDGGPDLGPGFTADNRSARLEALELVRAAVELADRIERDAQETAKDRLARTEEEVRLRRI
Ga0318519_100829841	3300033290	Soil	VAREEGELRSEELGADVIALPQLERLPPNPDGDAGGSFTADNRSARLEALELVRAAVELADRIERDAQETAKDRLTRTEEGVRLRR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F064752

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences