NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F064574

Metagenome / Metatranscriptome Family F064574

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F064574
Family Type Metagenome / Metatranscriptome
Number of Sequences 128
Average Sequence Length 51 residues
Representative Sequence FLMNRDQLLPALRALEEPLGQLERALEAGDAAALRSWLTRAADWRRRLDA
Number of Associated Samples 111
Number of Associated Scaffolds 128

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 9.57 %
% of genes near scaffold ends (potentially truncated) 81.25 %
% of genes from short scaffolds (< 2000 bps) 73.44 %
Associated GOLD sequencing projects 104
AlphaFold2 3D model prediction Yes
3D model pTM-score0.62

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Bacteria (89.062 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil
(27.344 % of family members)
Environment Ontology (ENVO) Unclassified
(42.969 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(52.344 % of family members)


 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      

 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 55.13%    β-sheet: 0.00%    Coil/Unstructured: 44.87%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.62
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 128 Family Scaffolds
PF00275EPSP_synthase 82.03
PF02224Cytidylate_kin 5.47
PF02153PDH_N 4.69
PF00069Pkinase 3.12
PF08241Methyltransf_11 0.78
PF00575S1 0.78
PF01039Carboxyl_trans 0.78
PF00572Ribosomal_L13 0.78

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 128 Family Scaffolds
COG0515Serine/threonine protein kinaseSignal transduction mechanisms [T] 12.50
COG0283Cytidylate kinaseNucleotide transport and metabolism [F] 5.47
COG0287Prephenate dehydrogenaseAmino acid transport and metabolism [E] 4.69
COG0102Ribosomal protein L13Translation, ribosomal structure and biogenesis [J] 0.78
COG0777Acetyl-CoA carboxylase beta subunitLipid transport and metabolism [I] 0.78
COG0825Acetyl-CoA carboxylase alpha subunitLipid transport and metabolism [I] 0.78
COG4799Acetyl-CoA carboxylase, carboxyltransferase componentLipid transport and metabolism [I] 0.78

 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms89.06 %
UnclassifiedrootN/A10.94 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300002561|JGI25384J37096_10049877All Organisms → cellular organisms → Bacteria1593Open in IMG/M
3300002908|JGI25382J43887_10031647All Organisms → cellular organisms → Bacteria2859Open in IMG/M
3300002912|JGI25386J43895_10018167All Organisms → cellular organisms → Bacteria2055Open in IMG/M
3300005166|Ga0066674_10322186All Organisms → cellular organisms → Bacteria726Open in IMG/M
3300005175|Ga0066673_10238229All Organisms → cellular organisms → Bacteria → Proteobacteria1050Open in IMG/M
3300005175|Ga0066673_10776907All Organisms → cellular organisms → Bacteria548Open in IMG/M
3300005176|Ga0066679_11051473All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium504Open in IMG/M
3300005179|Ga0066684_10006436All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis5357Open in IMG/M
3300005180|Ga0066685_10041899All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis2905Open in IMG/M
3300005187|Ga0066675_11327832All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales529Open in IMG/M
3300005440|Ga0070705_100742810All Organisms → cellular organisms → Bacteria775Open in IMG/M
3300005444|Ga0070694_100982572All Organisms → cellular organisms → Bacteria → Proteobacteria700Open in IMG/M
3300005536|Ga0070697_100735555All Organisms → cellular organisms → Bacteria871Open in IMG/M
3300005545|Ga0070695_100578055All Organisms → cellular organisms → Bacteria879Open in IMG/M
3300005555|Ga0066692_10537141All Organisms → cellular organisms → Bacteria741Open in IMG/M
3300005558|Ga0066698_10000736All Organisms → cellular organisms → Bacteria13051Open in IMG/M
3300005558|Ga0066698_10058372All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis2457Open in IMG/M
3300005559|Ga0066700_10371878All Organisms → cellular organisms → Bacteria1009Open in IMG/M
3300005561|Ga0066699_11090731All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium550Open in IMG/M
3300005575|Ga0066702_10549612All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes698Open in IMG/M
3300005586|Ga0066691_10201560All Organisms → cellular organisms → Bacteria1159Open in IMG/M
3300005598|Ga0066706_10355015All Organisms → cellular organisms → Bacteria1163Open in IMG/M
3300006031|Ga0066651_10583961All Organisms → cellular organisms → Bacteria → Proteobacteria593Open in IMG/M
3300006034|Ga0066656_10844281All Organisms → cellular organisms → Bacteria → Proteobacteria586Open in IMG/M
3300006794|Ga0066658_10123085All Organisms → cellular organisms → Bacteria1269Open in IMG/M
3300006797|Ga0066659_10623608All Organisms → cellular organisms → Bacteria877Open in IMG/M
3300006806|Ga0079220_10876001All Organisms → cellular organisms → Bacteria692Open in IMG/M
3300007076|Ga0075435_100315242All Organisms → cellular organisms → Bacteria → Proteobacteria1338Open in IMG/M
3300009012|Ga0066710_101699278All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium960Open in IMG/M
3300009038|Ga0099829_11235645All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium618Open in IMG/M
3300009090|Ga0099827_10732180All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium855Open in IMG/M
3300009090|Ga0099827_10917068All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium759Open in IMG/M
3300009094|Ga0111539_10221806All Organisms → cellular organisms → Bacteria2202Open in IMG/M
3300009100|Ga0075418_12349025All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium582Open in IMG/M
3300009610|Ga0105340_1151268All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes957Open in IMG/M
3300009804|Ga0105063_1011947All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes936Open in IMG/M
3300010301|Ga0134070_10352595All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes571Open in IMG/M
3300010303|Ga0134082_10120526All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium1048Open in IMG/M
3300010304|Ga0134088_10066330All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium1672Open in IMG/M
3300010326|Ga0134065_10007669All Organisms → cellular organisms → Bacteria2803Open in IMG/M
3300010329|Ga0134111_10148777All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium925Open in IMG/M
3300010329|Ga0134111_10263202All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes711Open in IMG/M
3300010329|Ga0134111_10464493All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium551Open in IMG/M
3300010333|Ga0134080_10382961All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium647Open in IMG/M
3300010337|Ga0134062_10229402All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium856Open in IMG/M
3300010403|Ga0134123_10203594All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes1687Open in IMG/M
3300011270|Ga0137391_10085917All Organisms → cellular organisms → Bacteria2718Open in IMG/M
3300012198|Ga0137364_10893608All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium672Open in IMG/M
3300012203|Ga0137399_10174938All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes1730Open in IMG/M
3300012207|Ga0137381_11490274All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium568Open in IMG/M
3300012210|Ga0137378_10699186All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium925Open in IMG/M
3300012210|Ga0137378_11507907All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium583Open in IMG/M
3300012211|Ga0137377_10564371All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium1076Open in IMG/M
3300012285|Ga0137370_10292711All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium971Open in IMG/M
3300012285|Ga0137370_10704414All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes627Open in IMG/M
3300012349|Ga0137387_10585709All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium809Open in IMG/M
3300012350|Ga0137372_10051536All Organisms → cellular organisms → Bacteria3634Open in IMG/M
3300012354|Ga0137366_10050375All Organisms → cellular organisms → Bacteria3197Open in IMG/M
3300012354|Ga0137366_10468015All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium912Open in IMG/M
3300012354|Ga0137366_10861082All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium641Open in IMG/M
3300012355|Ga0137369_10066587All Organisms → cellular organisms → Bacteria3068Open in IMG/M
3300012357|Ga0137384_10259354All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium1449Open in IMG/M
3300012357|Ga0137384_11571623All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium507Open in IMG/M
3300012359|Ga0137385_10483241All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium1049Open in IMG/M
3300012360|Ga0137375_10546924All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium975Open in IMG/M
3300012360|Ga0137375_10711655All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium819Open in IMG/M
3300012922|Ga0137394_10282570All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium1419Open in IMG/M
3300012924|Ga0137413_10272104All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium1172Open in IMG/M
3300012925|Ga0137419_10350075All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium1142Open in IMG/M
3300012930|Ga0137407_11840341All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium577Open in IMG/M
3300012972|Ga0134077_10444485All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium567Open in IMG/M
3300012976|Ga0134076_10043229All Organisms → cellular organisms → Bacteria1683Open in IMG/M
3300012977|Ga0134087_10466527All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium629Open in IMG/M
3300014154|Ga0134075_10512381All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium538Open in IMG/M
3300014154|Ga0134075_10567535All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes513Open in IMG/M
3300015051|Ga0137414_1218327All Organisms → cellular organisms → Bacteria4021Open in IMG/M
3300015241|Ga0137418_10404055All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium1114Open in IMG/M
3300015357|Ga0134072_10376079All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium553Open in IMG/M
3300017659|Ga0134083_10572315All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium513Open in IMG/M
3300018054|Ga0184621_10243039All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes643Open in IMG/M
3300018071|Ga0184618_10207338All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium821Open in IMG/M
3300018071|Ga0184618_10513029All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium502Open in IMG/M
3300018078|Ga0184612_10313880All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium801Open in IMG/M
3300018084|Ga0184629_10200228All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium1031Open in IMG/M
3300018468|Ga0066662_10044953All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes2765Open in IMG/M
3300019789|Ga0137408_1473920All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium1601Open in IMG/M
3300020004|Ga0193755_1043438All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium1473Open in IMG/M
3300022195|Ga0222625_1076525All Organisms → cellular organisms → Bacteria630Open in IMG/M
3300024290|Ga0247667_1052055All Organisms → cellular organisms → Bacteria761Open in IMG/M
3300025289|Ga0209002_10624463All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium576Open in IMG/M
3300025885|Ga0207653_10160955All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium831Open in IMG/M
3300025922|Ga0207646_10140068Not Available2178Open in IMG/M
3300026298|Ga0209236_1020367All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes3713Open in IMG/M
3300026315|Ga0209686_1179387All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium590Open in IMG/M
3300026316|Ga0209155_1110215All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium976Open in IMG/M
3300026320|Ga0209131_1157924All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes1135Open in IMG/M
3300026324|Ga0209470_1201759All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium841Open in IMG/M
3300026327|Ga0209266_1014129All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes4545Open in IMG/M
3300026331|Ga0209267_1100774All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium1229Open in IMG/M
3300026523|Ga0209808_1060380All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes1692Open in IMG/M
3300026524|Ga0209690_1015857All Organisms → cellular organisms → Bacteria3902Open in IMG/M
3300026524|Ga0209690_1092820All Organisms → cellular organisms → Bacteria1250Open in IMG/M
3300026528|Ga0209378_1287147All Organisms → cellular organisms → Bacteria525Open in IMG/M
3300026530|Ga0209807_1026187All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes2821Open in IMG/M
3300026542|Ga0209805_1001163All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae16173Open in IMG/M
3300026548|Ga0209161_10102128All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes1727Open in IMG/M
3300026548|Ga0209161_10505252All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium535Open in IMG/M
3300026555|Ga0179593_1049375All Organisms → cellular organisms → Bacteria2859Open in IMG/M
3300027383|Ga0209213_1078311All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium617Open in IMG/M
3300027725|Ga0209178_1063002All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium1201Open in IMG/M
3300028828|Ga0307312_10100768All Organisms → cellular organisms → Bacteria1790Open in IMG/M
3300028884|Ga0307308_10250132All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium849Open in IMG/M
3300030620|Ga0302046_11128876All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium619Open in IMG/M
3300031114|Ga0308187_10181723All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium724Open in IMG/M
3300032770|Ga0335085_10496196All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium1394Open in IMG/M


 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil27.34%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil24.22%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil13.28%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil5.47%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment4.69%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil4.69%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere4.69%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere3.91%
SoilEnvironmental → Terrestrial → Soil → Loam → Grasslands → Soil3.12%
Groundwater SedimentEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment1.56%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil1.56%
SoilEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Soil0.78%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil0.78%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil0.78%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil0.78%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Soil0.78%
Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil0.78%
Groundwater SandEnvironmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand0.78%

Visualization
Powered by ApexCharts



Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300002561Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_40cmEnvironmentalOpen in IMG/M
3300002908Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_40cmEnvironmentalOpen in IMG/M
3300002912Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_40cmEnvironmentalOpen in IMG/M
3300005166Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_123EnvironmentalOpen in IMG/M
3300005175Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122EnvironmentalOpen in IMG/M
3300005176Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128EnvironmentalOpen in IMG/M
3300005179Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133EnvironmentalOpen in IMG/M
3300005180Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134EnvironmentalOpen in IMG/M
3300005187Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124EnvironmentalOpen in IMG/M
3300005440Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaGEnvironmentalOpen in IMG/M
3300005444Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaGEnvironmentalOpen in IMG/M
3300005536Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaGEnvironmentalOpen in IMG/M
3300005545Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaGEnvironmentalOpen in IMG/M
3300005554Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110EnvironmentalOpen in IMG/M
3300005555Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141EnvironmentalOpen in IMG/M
3300005558Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147EnvironmentalOpen in IMG/M
3300005559Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149EnvironmentalOpen in IMG/M
3300005561Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148EnvironmentalOpen in IMG/M
3300005575Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_151EnvironmentalOpen in IMG/M
3300005586Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140EnvironmentalOpen in IMG/M
3300005598Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155EnvironmentalOpen in IMG/M
3300006031Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Angelo_100EnvironmentalOpen in IMG/M
3300006034Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_105EnvironmentalOpen in IMG/M
3300006794Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107EnvironmentalOpen in IMG/M
3300006797Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108EnvironmentalOpen in IMG/M
3300006800Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109EnvironmentalOpen in IMG/M
3300006806Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100EnvironmentalOpen in IMG/M
3300006845Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5Host-AssociatedOpen in IMG/M
3300006854Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4Host-AssociatedOpen in IMG/M
3300007076Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4Host-AssociatedOpen in IMG/M
3300009012Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159EnvironmentalOpen in IMG/M
3300009038Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaGEnvironmentalOpen in IMG/M
3300009090Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaGEnvironmentalOpen in IMG/M
3300009094Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)Host-AssociatedOpen in IMG/M
3300009100Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2Host-AssociatedOpen in IMG/M
3300009610Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT700EnvironmentalOpen in IMG/M
3300009804Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N3_30_40EnvironmentalOpen in IMG/M
3300010301Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09082015EnvironmentalOpen in IMG/M
3300010303Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09182015EnvironmentalOpen in IMG/M
3300010304Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09182015EnvironmentalOpen in IMG/M
3300010326Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_2_24_1 metaGEnvironmentalOpen in IMG/M
3300010329Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_11112015EnvironmentalOpen in IMG/M
3300010333Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_2_24_1 metaGEnvironmentalOpen in IMG/M
3300010337Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09082015EnvironmentalOpen in IMG/M
3300010403Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3EnvironmentalOpen in IMG/M
3300011270Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaGEnvironmentalOpen in IMG/M
3300012198Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaGEnvironmentalOpen in IMG/M
3300012203Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaGEnvironmentalOpen in IMG/M
3300012207Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaGEnvironmentalOpen in IMG/M
3300012210Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaGEnvironmentalOpen in IMG/M
3300012211Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaGEnvironmentalOpen in IMG/M
3300012285Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaGEnvironmentalOpen in IMG/M
3300012349Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaGEnvironmentalOpen in IMG/M
3300012350Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_60_16 metaGEnvironmentalOpen in IMG/M
3300012354Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_60_16 metaGEnvironmentalOpen in IMG/M
3300012355Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_113_16 metaGEnvironmentalOpen in IMG/M
3300012357Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaGEnvironmentalOpen in IMG/M
3300012359Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaGEnvironmentalOpen in IMG/M
3300012360Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_113_16 metaGEnvironmentalOpen in IMG/M
3300012363Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaGEnvironmentalOpen in IMG/M
3300012918Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaGEnvironmentalOpen in IMG/M
3300012922Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaGEnvironmentalOpen in IMG/M
3300012924Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012925Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012930Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012972Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_24_1 metaGEnvironmentalOpen in IMG/M
3300012975Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_11112015EnvironmentalOpen in IMG/M
3300012976Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_0_1 metaGEnvironmentalOpen in IMG/M
3300012977Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_5_24_1 metaGEnvironmentalOpen in IMG/M
3300014154Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09212015EnvironmentalOpen in IMG/M
3300015051Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (PacBio error correction)EnvironmentalOpen in IMG/M
3300015241Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300015357Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_5_0_1 metaGEnvironmentalOpen in IMG/M
3300017659Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_5_24_1 metaGEnvironmentalOpen in IMG/M
3300018054Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_b1EnvironmentalOpen in IMG/M
3300018071Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_b1EnvironmentalOpen in IMG/M
3300018072Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b2EnvironmentalOpen in IMG/M
3300018078Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_60_coexEnvironmentalOpen in IMG/M
3300018084Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_32_b1EnvironmentalOpen in IMG/M
3300018468Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111EnvironmentalOpen in IMG/M
3300019789Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (PacBio error correction)EnvironmentalOpen in IMG/M
3300019882Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H3a2EnvironmentalOpen in IMG/M
3300020004Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H1a2EnvironmentalOpen in IMG/M
3300021080Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_coex redoEnvironmentalOpen in IMG/M
3300022195Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300024290Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK08EnvironmentalOpen in IMG/M
3300025289Soil microbial communities from Rifle, Colorado, USA - sediment 16ft 2EnvironmentalOpen in IMG/M
3300025885Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025922Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300026298Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_40cm (SPAdes)EnvironmentalOpen in IMG/M
3300026315Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126 (SPAdes)EnvironmentalOpen in IMG/M
3300026316Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122 (SPAdes)EnvironmentalOpen in IMG/M
3300026320Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_40cm (SPAdes)EnvironmentalOpen in IMG/M
3300026324Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125 (SPAdes)EnvironmentalOpen in IMG/M
3300026327Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132 (SPAdes)EnvironmentalOpen in IMG/M
3300026331Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137 (SPAdes)EnvironmentalOpen in IMG/M
3300026523Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157 (SPAdes)EnvironmentalOpen in IMG/M
3300026524Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150 (SPAdes)EnvironmentalOpen in IMG/M
3300026528Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156 (SPAdes)EnvironmentalOpen in IMG/M
3300026530Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154 (SPAdes)EnvironmentalOpen in IMG/M
3300026542Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148 (SPAdes)EnvironmentalOpen in IMG/M
3300026548Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155 (SPAdes)EnvironmentalOpen in IMG/M
3300026552Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109 (SPAdes)EnvironmentalOpen in IMG/M
3300026555Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal (PacBio error correction)EnvironmentalOpen in IMG/M
3300027383Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM1_M2 (SPAdes)EnvironmentalOpen in IMG/M
3300027725Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200 (SPAdes)EnvironmentalOpen in IMG/M
3300028828Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_202EnvironmentalOpen in IMG/M
3300028884Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_195EnvironmentalOpen in IMG/M
3300030620Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT147D111EnvironmentalOpen in IMG/M
3300031114Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_182 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300032770Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5EnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap


 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
JGI25384J37096_1004987713300002561Grasslands SoilSEPVLWTEILLMNRDELLPALRSLXEPXGELQRALEXGDAAAVTAWLGRAAEWRGRLET*
JGI25382J43887_1003164733300002908Grasslands SoilMNRDELLPALRSLEEPLGELQRALEVGDAAAVTAWLGRAAEWRGRLEP*
JGI25386J43895_1001816733300002912Grasslands SoilILLMNRDELLPTLRSLEEPLGELQRALEVGDAVAVRAWLGRAAEWRGRLET*
Ga0066674_1032218623300005166SoilWTEILLMNRDEILPALRALEESLGTVERALEVGDATALTAWLTRAAEWRRRIGP*
Ga0066673_1023822913300005175SoilEIFLMNRDQLLPALRALEEPLGQLERALEAGDAAALRSWLTRAADWRRRLDA*
Ga0066673_1077690713300005175SoilEIFLMNRDQLLPALRALEEPLGQLERALEAGDAAALRSWLARAADWRRSLDP*
Ga0066679_1105147313300005176SoilLPALRALEEPLGQLERALEAGDAAALRSWLTRAADWRRRLDA*
Ga0066684_1000643613300005179SoilEIFLMNRDELLPALRSLEQPLGELERALETGNAQAVTAWLSCAAQWRRQADA*
Ga0066685_1004189943300005180SoilTEILLLNRDVLLPALRALEEPLGEVERALEAGDPIALRAWLTRAADWRRGLDA*
Ga0066675_1132783213300005187SoilALWTEIFLMNRDELLPALRSLEQPLGELEHALETGNAQAVTAWLSCAAQWRRQADA*
Ga0070705_10074281013300005440Corn, Switchgrass And Miscanthus RhizosphereQLWTEILLLNRDEVLPALRALEEPLGALERALEAGDAKRVAEWLAAAAAWRRALER*
Ga0070694_10098257213300005444Corn, Switchgrass And Miscanthus RhizosphereNRDEVLPALRALEEPLGAVERALEAGDGPALTAWLTQAADWRRRVDQ*
Ga0070697_10073555523300005536Corn, Switchgrass And Miscanthus RhizosphereLWTEILLLNRDEVLPALRALEEPLGALERALEAGDAKRVAEWLAAAAAWRRALER*
Ga0070695_10057805523300005545Corn, Switchgrass And Miscanthus RhizosphereLWTEILLMNRDEVLPALRALEEPLGAVERALEAGDGPALTAWLTQAADWRRRVDQ*
Ga0066661_1066847523300005554SoilRALEEPLGEVERALEAGDAVALRAWLTRAADWRRGLDA*
Ga0066692_1053714123300005555SoilLWTEILLMNRDEILPALRGLEESLGTVERALEVGDAAALTAWLTRAATWRRRIGGS*
Ga0066698_10000736143300005558SoilFLMNRDELLPALRSLEEPLGELERALEAGDAAGLTAWLRRGAEWRRRLDA*
Ga0066698_1005837243300005558SoilLNRDVLLPALRALEEPLGEVERALEAGDPIALRAWLTRAADWRRGLDA*
Ga0066700_1037187823300005559SoilMNRDQLLPALRALEEPLGQLERALEAGDAAALRSWLTRAADWRRRLDA*
Ga0066699_1109073113300005561SoilLLPALRALEEPLGQLERALEAGDAAALTTWLTRAADWRRRLDA*
Ga0066702_1054961213300005575SoilFLMNRDELLPALRSLEEPLGELERALETGNARAVTAWLRRAAQWRRQADA*
Ga0066691_1020156013300005586SoilRDELLPALRALEEPLGGLERALESGDATSLHALLARAGEWRRKLDG*
Ga0066706_1035501513300005598SoilEIFLMNRDQLLPALRALEEPLGQLERALEAGDAAALRGWLTRAADWRRRLDA*
Ga0066651_1058396123300006031SoilEIFLMNRDELLPALRSLEQPLGELEHALETGNAQAVTAWLSCAAQWRRQADA*
Ga0066656_1084428123300006034SoilIFLMNRDELLPALRSLEQPLGELERALETGNAQAVTAWLSCAAQWRRQADA*
Ga0066658_1012308523300006794SoilMNRDEILPALRGLEESLGTVERALEVGDAAALTAWLTRAATWRRRIGGT*
Ga0066659_1062360813300006797SoilASEPALWTEILLMNRDELLPALRSLEEPLGELQRALEVGDAAAVTAWLGRAAEWRARLDT
Ga0066660_1052438323300006800SoilALRALEEPLGQLERALEAGDAAALTSWLTQAADWRRRLDP*
Ga0079220_1087600123300006806Agricultural SoilEILLMNRDEILPVLRALEEPLGELERALETGNAPALTAWLSRAAHWRRQAEA*
Ga0075421_10117890323300006845Populus RhizosphereLRALEEPLGAVERALEAGDGAALAAWLTQAAEWRRAQS*
Ga0075425_10177878223300006854Populus RhizosphereLEEPLGAVERALESGDGPALTAWLTQAADWRRRVEP*
Ga0075435_10031524223300007076Populus RhizosphereQLWTEILLMNRDELLVALRALEESLGSVERALETGDARALLAWLTRAADWRRGVGQ*
Ga0066710_10169927813300009012Grasslands SoilILLMNRDEILPALRALEESLGTVERALEVGDATALTAWLTRAAEWRRRIGP
Ga0099829_1123564523300009038Vadose Zone SoilLLMNRDEILPVLRALEEPLGELERALETGNAPALTAWLSRAARWRRQAEA*
Ga0099827_1073218013300009090Vadose Zone SoilSEPTLWTEILLMNRDELLPALRSLEEPLGELQRALEAGDAVAVRAWLGRGAEWRARLET*
Ga0099827_1091706823300009090Vadose Zone SoilALWTEIFLMNRDELLPALRSLEEPLGELERALETGNARAVTAWLRRAAQWRRQADA*
Ga0111539_1022180633300009094Populus RhizosphereMNRDEILPALRALEESLGTVERALEVGDAAALTEWLTRAATWRQRLG*
Ga0075418_1234902513300009100Populus RhizosphereRDQVLPALRALEEPLGAVERALEAGDGPALTKWLTRAAEWRRRVEPEP*
Ga0105340_115126823300009610SoilWTEILLMNRDVLLPALRALEEPLGELAHALEQGDAPTVTAWLARGAEWRRTIGP*
Ga0105063_101194713300009804Groundwater SandMNRDEILPALRALEESLGTVERALEVGDAAALTAWLTRAASWRRRLGGQ*
Ga0134070_1035259513300010301Grasslands SoilALWTEILLMNRDEILPALRALEESLGTVERALEVGDASALSAWLARAAAWRRRIGGGGSGL*
Ga0134082_1012052613300010303Grasslands SoilTEIFLMNRDQLLPALRALEEPLGQLERALEAGDAAALRSWLTRAADWRRRLDA*
Ga0134088_1006633013300010304Grasslands SoilTRLAASEPGLWTEILLMNRDVLLPALRALEEPLGELEHALECGDAGAVAAWLGRGAAWRRRIDA*
Ga0134065_1000766943300010326Grasslands SoilWTEIFLMNRDQLLPALRALEEPLGQLERALEAGDAAALRSWLTRAADWRRRLDA*
Ga0134111_1014877713300010329Grasslands SoilMNRDEVLPALRALEEPLGAVERALEAGDGPALTAWLTRAADWRRRVEP*
Ga0134111_1026320213300010329Grasslands SoilILLMNRDEILPALRVLEESLGTVERALEVGDAAALTDWLSRAAAWRRRVAP*
Ga0134111_1046449313300010329Grasslands SoilALWTEVFLMNRDELLPALRSLEEPLGELERALEAGDAVGLTAWLRRGAEWRRRLDT*
Ga0134080_1038296113300010333Grasslands SoilASEPVLWTEILLMNRDELLPALRSLEEPLGELQRALELGDAAAVTAWLGRAAEWRGRLEP
Ga0134062_1022940223300010337Grasslands SoilMNRDELLPALRSLEEPLGELERALEAGDAVGLTAWLRRGAEWRRRLDT*
Ga0134123_1020359433300010403Terrestrial SoilWTEILLMNRDEILPALRALEESLGTVERALETGDAAVLTDWLTRAAAWRRRLG*
Ga0137391_1008591713300011270Vadose Zone SoilDELLPALRALEESLGTVEHALEVGDATALMAWLTRAATWRRRIGGS*
Ga0137364_1089360823300012198Vadose Zone SoilALWTEIFLMNRDELLPALRSLEEPLGELERALETGNAQAVTAWLSRAAQWRRQADA*
Ga0137399_1017493833300012203Vadose Zone SoilEPALWTEILLMNRDELLPALRSLEEPLGELQRALETGDAVAVRAWLGRAAEWRGRFET*
Ga0137381_1149027423300012207Vadose Zone SoilWAEIFLMNRDELLAALRSLEEPLGELERALESGDAVGLGGWLARGADWRRRLRT*
Ga0137378_1011189013300012210Vadose Zone SoilPALRALEEPLGALERALEAGDAKRVTEWLATAAAWRRRVEA*
Ga0137378_1069918623300012210Vadose Zone SoilWTEILLMNRDEILPALRALEESLGTVERALEVGDAATLTAWLTRAASWRRRIGSE*
Ga0137378_1150790723300012210Vadose Zone SoilLLMNRDELLVALRALEESLGSVERALETGDARALTAWLTRASDWRRGIGP*
Ga0137377_1056437123300012211Vadose Zone SoilFLMNRDQLLPALRALEEPLGQLERALEAGDAAALRSWLTRAADWRRRLDA*
Ga0137370_1029271113300012285Vadose Zone SoilLLMNRDMLLPALRELEEPLGELERALECGDAPGVAAWLGRAAAWRRRIDA*
Ga0137370_1070441413300012285Vadose Zone SoilLWTEIFLMNRDELLPALRSLEEPLGELERALEAGDAAGLTAWLRRGAEWRRRLDA*
Ga0137387_1058570923300012349Vadose Zone SoilMNRDEILPALRGLEESLGTVERALEVGDAAALTAWLTRAATWRRRIGGS*
Ga0137372_1005153643300012350Vadose Zone SoilEILLMNRDELLVALRALEESLGSVERALETGDARALTAWLTRASDWRRGVGP*
Ga0137372_1033107723300012350Vadose Zone SoilPALRALEEPLGQLERALEAGDAAALRSWLTRAADWRRRLDA*
Ga0137366_1005037543300012354Vadose Zone SoilMNRDEILPALRALEESLGTVEHALEVGDATALSAWLARAAAWRRRIGGSGL*
Ga0137366_1046801523300012354Vadose Zone SoilLWTEILLMNRDEILPALRALEESLGTVERALEVGDAAALTAWLTRAASWRRRIGNQ*
Ga0137366_1086108223300012354Vadose Zone SoilMNRDELLAALRSLEEPLGELERALESGDAVGLGGWLARGADWRRRLRT*
Ga0137369_1006658743300012355Vadose Zone SoilWAEIFLMNRDEVLTALRALEQPLGELERALETGDAPALIAWLARAAEWRRRLDA*
Ga0137384_1025935413300012357Vadose Zone SoilRDQVLPALRAFEEPLGEVERALEAGDAAALERWLASAAEWRRQAGP*
Ga0137384_1157162313300012357Vadose Zone SoilRDEILPALRALEESLGTVEHALEVGDATALSAWLTRAAVWRRRIGGSGL*
Ga0137385_1048324123300012359Vadose Zone SoilLWTEIFLMNRDELLPALRSLEEPLGELERALETGNARAVTAWLRRAAQWRRQADA*
Ga0137375_1054692423300012360Vadose Zone SoilGLWTEILLMNRDEILPAIRGFEESLGTVARALEVGDAAALTAWLTRVANWRRRIGGS*
Ga0137375_1071165523300012360Vadose Zone SoilRDEVLPALRALEEPLGELERTLETGDAGGLAAWLGRASAWRRKVDG*
Ga0137390_1037038823300012363Vadose Zone SoilALRALEEPLGALERALEAGDAAAVRGWLARPSEWRRRAEM*
Ga0137396_1030422923300012918Vadose Zone SoilLRALEEPLGEVERALEDGDPVALRAWLTRAADWRRGLDA*
Ga0137394_1028257023300012922Vadose Zone SoilWTEIFLMNRDELLPALRALEEPLGELERALETGNARAVTAWLSRAAQWRRQADA*
Ga0137413_1027210413300012924Vadose Zone SoilPGLWTEILLMNRDEILPALRGLEESLGTVERALEVGDAAALTAWLTRAANWRRRIGGS*
Ga0137419_1035007513300012925Vadose Zone SoilEILLMNRDEILPALRALEESLGTVQRALEVGDAAALTAWLTRAAIWRRRIGSP*
Ga0137407_1184034113300012930Vadose Zone SoilILLMNRDEILPALRGLEESLGTVERALEVGDAAALTAWLTRAAKWRRRIGGS*
Ga0134077_1044448523300012972Grasslands SoilLMNRDEILPALRALEESLGTVERALEVGDAAALTAWLTRASAWRRRLG*
Ga0134110_1015476323300012975Grasslands SoilLRALEEPLGQLERALEAGDAAALTTWLTRAGDWRRRLDA*
Ga0134076_1004322913300012976Grasslands SoilLWTEVFLMNRDELLPALRSLEEPLGELERALEAGDAVGLTAWLRRGAEWRRRLDT*
Ga0134087_1046652723300012977Grasslands SoilLWTEIFLMNRDELLPALSSLEEPLGELERALETGNARAVTAWLRRAAQWRRQADA*
Ga0134075_1051238123300014154Grasslands SoilEILLMNRDELLPALRGLEESLGSVERALEAGDAAALTAWLTRAATWRRRIGGA*
Ga0134075_1056753513300014154Grasslands SoilVLLPALRALEEPLGEIERALEAGDATALKAWLATASDWRRGLDA*
Ga0137414_121832783300015051Vadose Zone SoilMNRDEILPVLRALEEPLGELERALETGNAPALTAWLSRAARWRRQAEA*
Ga0137418_1040405513300015241Vadose Zone SoilVLVMNRREGAAGLGALEEPLGELERALETGNAPALTAWLSRAAQWRRQADA*
Ga0134072_1037607913300015357Grasslands SoilIFLMNRDQLLPALRALEEPLGQLERALEAGDAAALTTWLTRAGDWRRRLDA*
Ga0134083_1057231523300017659Grasslands SoilLLLNRDEVLPALRGLEEPLGELERALETGNATGVTAWLARAAEWRRRADA
Ga0184621_1024303913300018054Groundwater SedimentTEILLMNRDEVLPALRALEEPLGAVERALEAGDGPALTGWLTKAAEWRRRVEP
Ga0184618_1020733813300018071Groundwater SedimentGLWTEILLMNRDEVLPALRALEEPLGAVERALEAGDGPALTAWLARAADWRRRVEP
Ga0184618_1051302923300018071Groundwater SedimentLMNRDEVLPALRALEEPLGAVERALEAGDGPALTGWLTRAAEWRRRVGP
Ga0184635_1021955213300018072Groundwater SedimentALRALEEPLGAVERALEAGDGPALTGWLTKAAEWRRRVEP
Ga0184612_1031388023300018078Groundwater SedimentEVLPALRALEEPLGAVERALEAGDGPALTAWLTQAADWRRRIDP
Ga0184629_1020022823300018084Groundwater SedimentLWTEILLMNRDEVLPALRALEEPLGAVERALEAGDGPALTAWLTQAADWRRRVEP
Ga0066662_1004495343300018468Grasslands SoilFLMNRDELLPALRSLEEPLGELERALEAGDAAGLTAWLRRGAEWRRRLDA
Ga0137408_147392033300019789Vadose Zone SoilIFLMNRDELLPALRSLEEPLGELERALETGNARAVTAWLSRAAQWRRQADA
Ga0193713_109019113300019882SoilLEEPLGAVERALEAGDGPALTAWLTQAADWRRRVDQ
Ga0193755_104343813300020004SoilLWTEILLMNRDELLVALRALDESLGSVERAIETGDARALMAWLTRAADWRRGVGP
Ga0210382_1032650823300021080Groundwater SedimentRALEEPLGAVERALEAGDGPALTAWLARAADWRRRVEP
Ga0222625_107652523300022195Groundwater SedimentEILLMNRDEVLPALRALEEPLGAVERALEAGDGPALTAWLTVAADWRRRVDP
Ga0247667_105205523300024290SoilQLWTEILLLNRDEVLPALRALEEPLGALERALEAGDAKRVAEWLAAAAAWRRRVEV
Ga0209002_1062446313300025289SoilLLNRDEVLGALRALEEPLGELERALEAGDAGGVAVWLSRAAEWSCLPGCGTL
Ga0207653_1016095523300025885Corn, Switchgrass And Miscanthus RhizosphereASDPELWTEILLMNRDEILPALRKLEESLGTVERALEVGDAAAFTAWLTRAAEWRRRIAP
Ga0207646_1014006823300025922Corn, Switchgrass And Miscanthus RhizosphereLPALRALEEPLGALERALEAGDAKRVAEWLAAAAAWRRRVEA
Ga0209236_102036743300026298Grasslands SoilLNRDVLLPALRALEEPLGEVERALEAGDAVALRAWLTRAADWRRGLDA
Ga0209686_117938723300026315SoilTEIFLMNRDELLPALRSLEQPLGELEHALETGNAQAVTAWLSCAAQWRRQADA
Ga0209155_111021523300026316SoilLWTEIFLMNRDELLPALRSLEEPLGELERALETGNAPAVTAWLSRAAQWRRQADA
Ga0209131_115792413300026320Grasslands SoilMNRDELLVALRALEESLGSVEHALETGDARALLAWLTRAADWRRGVGP
Ga0209470_120175913300026324SoilLLMNRDVLLPALRALEEPLGELEHALECGDAGAVAAWLGRGAAWRRRIDA
Ga0209266_101412953300026327SoilWTEILLMNRDEVLPALRLLEESLGTVERALEAGDAKALTAWLTRAAAWRRRIGP
Ga0209267_110077413300026331SoilMNRDQLLPALRALEEPLGQLERALEAGDAAALRSWLTRAADWRRRLDA
Ga0209808_106038033300026523SoilWTEIFLMNRDELLPALRSLEQPLGELERALETGNAQAVTAWLSCAAQWRRQADA
Ga0209690_101585723300026524SoilMNRDELLPALRSLEEPLGELERALEAGDAAGLAAWLRRGAEWRRRLDA
Ga0209690_109282023300026524SoilMNRDEILPALRVLEESLGTVERALEVGDAGALSAWLERAAAWRRRIGGSEA
Ga0209378_128714723300026528SoilMNRDELLPALRSLEAPLGELERALELGDAPALSAWLGSAAAWRRRLDP
Ga0209807_102618743300026530SoilALWTEIFLMNRDELLPALRSLEEPLGELERALETGNAPAVTAWLSRAAQWRRQADA
Ga0209805_1001163183300026542SoilNRDQLLPALRALEEPLGQLERALEAGDATALTTWLTRAADWRRGLDA
Ga0209161_1010212813300026548SoilLMNRDELLPALRSLEEPLGELERALETGNAPAVTAWLSRAAQWRRQADA
Ga0209161_1050525223300026548SoilWSEILLLNRDEVLPALRGLEEPLGELERALETGNATGVTAWLTRAAEWRRRADA
Ga0209577_1000125613300026552SoilPALRALEEPLGQLERALEAGDAAALTSWLTQAADWRRRLDP
Ga0179593_104937563300026555Vadose Zone SoilMNRDEILPVLRALEEPLGELERASRRGTPGPDRVAQPRARWRRQAEA
Ga0209213_107831113300027383Forest SoilFLMNRDELLPALRSLEEPLGELERALETGNAPAVTAWLSRAAQWRRQAGA
Ga0209178_106300213300027725Agricultural SoilDEVLPALRALEEPLGQIERALETGDARSLTAWLGQGAEWRRRIDA
Ga0307312_1010076833300028828SoilNRDEILPALRGLGESLGTVERALEAGDAPALTAWLTRAATWRRRIGGS
Ga0307308_1025013213300028884SoilLWTEILLMNRDEILPVLRGLEESLGTVERALEVGDAAALNAWLTRAATWRRRLG
Ga0302046_1112887623300030620SoilPALWTEILLMNRDELLPALRALEESLGTAERAIEMGDAAALTAWLTRAAVWRRRLDGRGDGA
Ga0308187_1018172313300031114SoilVLPALRALEEPLGAVERALEAGDGPALTAWLTVAADWRRRVDP
Ga0335085_1049619613300032770SoilRLWTEILLMNRDEILPALRALEEPLGELERALEAGDAEAVREWLAAASRWRRGLA

 ⦗Top⦘


Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.