Metagenome / Metatranscriptome Family F064532

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F064532
Family Type	Metagenome / Metatranscriptome
Number of Sequences	128
Average Sequence Length	66 residues
Representative Sequence	MSPAPQAVLEELRRSALETYGEERSAEARLQTALVAAATAVSRVMQEPLEPLGNEPLPTHG
Number of Associated Samples	95
Number of Associated Scaffolds	128

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	62.70 %
% of genes near scaffold ends (potentially truncated)	18.75 %
% of genes from short scaffolds (< 2000 bps)	86.72 %
Associated GOLD sequencing projects	88
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.64

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (73.438 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (26.562 % of family members)
Environment Ontology (ENVO)	Unclassified (31.250 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (46.094 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Fibrous	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 44.94% β-sheet: 0.00% Coil/Unstructured: 55.06%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.64
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.64
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 128 Family Scaffolds
PF01425	Amidase	50.78
PF09349	OHCU_decarbox	9.38
PF09995	MPAB_Lcp_cat	7.03
PF04545	Sigma70_r4	3.91
PF02146	SIR2	1.56
PF03734	YkuD	1.56
PF07730	HisKA_3	0.78
PF04932	Wzy_C	0.78

COG ID	Name	Functional Category	% Frequency in 128 Family Scaffolds
COG0154	Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit or related amidase	Translation, ribosomal structure and biogenesis [J]	50.78
COG0846	NAD-dependent protein deacetylase, SIR2 family	Posttranslational modification, protein turnover, chaperones [O]	1.56
COG1376	Lipoprotein-anchoring transpeptidase ErfK/SrfK	Cell wall/membrane/envelope biogenesis [M]	1.56
COG3034	Murein L,D-transpeptidase YafK	Cell wall/membrane/envelope biogenesis [M]	1.56
COG3307	O-antigen ligase	Cell wall/membrane/envelope biogenesis [M]	0.78
COG3850	Signal transduction histidine kinase NarQ, nitrate/nitrite-specific	Signal transduction mechanisms [T]	0.78
COG3851	Signal transduction histidine kinase UhpB, glucose-6-phosphate specific	Signal transduction mechanisms [T]	0.78
COG4564	Signal transduction histidine kinase	Signal transduction mechanisms [T]	0.78
COG4585	Signal transduction histidine kinase ComP	Signal transduction mechanisms [T]	0.78

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	76.56 %
Unclassified	root	N/A	23.44 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	76.56 %
Unclassified	root	N/A	23.44 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	73.44 %
Unclassified	root	N/A	23.44 %
Eukaryota	superkingdom	All Organisms → cellular organisms → Eukaryota	3.12 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	56.25 %
Unclassified	root	N/A	23.44 %
Opisthokonta	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta	3.12 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	2.34 %

Name	Rank	Taxonomy	Distribution
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	55.47 %
Unclassified	root	N/A	23.44 %
Fungi	kingdom	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi	3.12 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.78 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.78 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.78 %

Name	Rank	Taxonomy	Distribution
unclassified Chloroflexi	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi	53.91 %
Unclassified	root	N/A	23.44 %
Thermomicrobia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia	0.78 %
Fungi incertae sedis	no rank	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Fungi incertae sedis	0.78 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.78 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	0.78 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.78 %

Name	Rank	Taxonomy	Distribution
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	53.91 %
Unclassified	root	N/A	23.44 %
Olpidiomycota	phylum	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Fungi incertae sedis → Olpidiomycota	0.78 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.78 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.78 %
Sphaerobacteridae	subclass	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Sphaerobacteridae	0.78 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.78 %

Name	Rank	Taxonomy	Distribution
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	53.91 %
Unclassified	root	N/A	23.44 %
Olpidiomycotina	subphylum	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Fungi incertae sedis → Olpidiomycota → Olpidiomycotina	0.78 %
Sphaerobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Sphaerobacteridae → Sphaerobacterales	0.78 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.78 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.78 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.78 %

Name	Rank	Taxonomy	Distribution
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	53.91 %
Unclassified	root	N/A	23.44 %
Olpidiomycetes	class	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Fungi incertae sedis → Olpidiomycota → Olpidiomycotina → Olpidiomycetes	0.78 %
Sphaerobacterineae	suborder	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Sphaerobacteridae → Sphaerobacterales → Sphaerobacterineae	0.78 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.78 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.78 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.78 %

Name	Rank	Taxonomy	Distribution
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	53.91 %
Unclassified	root	N/A	23.44 %
Sphaerobacteraceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Sphaerobacteridae → Sphaerobacterales → Sphaerobacterineae → Sphaerobacteraceae	0.78 %
Olpidiales	order	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Fungi incertae sedis → Olpidiomycota → Olpidiomycotina → Olpidiomycetes → Olpidiales	0.78 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.78 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.78 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.78 %

Name	Rank	Taxonomy	Distribution
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	53.91 %
Unclassified	root	N/A	23.44 %
Sphaerobacter	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Sphaerobacteridae → Sphaerobacterales → Sphaerobacterineae → Sphaerobacteraceae → Sphaerobacter	0.78 %
Olpidiaceae	family	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Fungi incertae sedis → Olpidiomycota → Olpidiomycotina → Olpidiomycetes → Olpidiales → Olpidiaceae	0.78 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.78 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.78 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.78 %

Name	Rank	Taxonomy	Distribution
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	53.91 %
Unclassified	root	N/A	23.44 %
Sphaerobacter thermophilus	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Sphaerobacteridae → Sphaerobacterales → Sphaerobacterineae → Sphaerobacteraceae → Sphaerobacter → Sphaerobacter thermophilus	0.78 %
Olpidium	genus	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Fungi incertae sedis → Olpidiomycota → Olpidiomycotina → Olpidiomycetes → Olpidiales → Olpidiaceae → Olpidium	0.78 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.78 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.78 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.78 %

Name	Rank	Taxonomy	Distribution
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	53.91 %
Unclassified	root	N/A	23.44 %
Olpidium bornovanus	species	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Fungi incertae sedis → Olpidiomycota → Olpidiomycotina → Olpidiomycetes → Olpidiales → Olpidiaceae → Olpidium → Olpidium bornovanus	0.78 %
Sphaerobacter thermophilus	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Sphaerobacteridae → Sphaerobacterales → Sphaerobacterineae → Sphaerobacteraceae → Sphaerobacter → Sphaerobacter thermophilus	0.78 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.78 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.78 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.78 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001661\|JGI12053J15887_10580556	Not Available	533	Open in IMG/M
3300004463\|Ga0063356_101462609	All Organisms → cellular organisms → Bacteria	1009	Open in IMG/M
3300005167\|Ga0066672_10711421	All Organisms → cellular organisms → Bacteria	642	Open in IMG/M
3300005174\|Ga0066680_10091481	All Organisms → cellular organisms → Bacteria	1849	Open in IMG/M
3300005181\|Ga0066678_10037439	All Organisms → cellular organisms → Bacteria	2693	Open in IMG/M
3300005181\|Ga0066678_10477876	All Organisms → cellular organisms → Bacteria	829	Open in IMG/M
3300005332\|Ga0066388_100434856	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1955	Open in IMG/M
3300005445\|Ga0070708_101483463	Not Available	632	Open in IMG/M
3300005454\|Ga0066687_10065942	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1737	Open in IMG/M
3300005467\|Ga0070706_100012081	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	8014	Open in IMG/M
3300005467\|Ga0070706_100405229	All Organisms → cellular organisms → Bacteria	1270	Open in IMG/M
3300005471\|Ga0070698_100939674	All Organisms → cellular organisms → Bacteria	811	Open in IMG/M
3300005471\|Ga0070698_101614364	Not Available	600	Open in IMG/M
3300005471\|Ga0070698_102143242	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	512	Open in IMG/M
3300005536\|Ga0070697_100820264	All Organisms → cellular organisms → Bacteria	823	Open in IMG/M
3300005537\|Ga0070730_10013042	All Organisms → cellular organisms → Bacteria → Proteobacteria	6712	Open in IMG/M
3300005537\|Ga0070730_10045676	All Organisms → cellular organisms → Bacteria	3196	Open in IMG/M
3300005537\|Ga0070730_10696063	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Fungi incertae sedis → Olpidiomycota → Olpidiomycotina → Olpidiomycetes → Olpidiales → Olpidiaceae → Olpidium → Olpidium bornovanus	644	Open in IMG/M
3300005537\|Ga0070730_10894790	Not Available	556	Open in IMG/M
3300005542\|Ga0070732_10644061	All Organisms → cellular organisms → Bacteria	644	Open in IMG/M
3300005549\|Ga0070704_100932466	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	782	Open in IMG/M
3300005552\|Ga0066701_10496564	All Organisms → cellular organisms → Bacteria	756	Open in IMG/M
3300005555\|Ga0066692_10506921	All Organisms → cellular organisms → Bacteria	767	Open in IMG/M
3300005557\|Ga0066704_10327322	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1031	Open in IMG/M
3300005558\|Ga0066698_10549485	Not Available	784	Open in IMG/M
3300005558\|Ga0066698_10697434	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	670	Open in IMG/M
3300005559\|Ga0066700_10262567	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1210	Open in IMG/M
3300005559\|Ga0066700_10387235	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	986	Open in IMG/M
3300005559\|Ga0066700_10668416	All Organisms → cellular organisms → Bacteria	717	Open in IMG/M
3300005561\|Ga0066699_10200829	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1388	Open in IMG/M
3300005561\|Ga0066699_10225423	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Sphaerobacteridae → Sphaerobacterales → Sphaerobacterineae → Sphaerobacteraceae → Sphaerobacter → Sphaerobacter thermophilus	1315	Open in IMG/M
3300005564\|Ga0070664_102155437	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	529	Open in IMG/M
3300005575\|Ga0066702_10312784	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	957	Open in IMG/M
3300005577\|Ga0068857_101048267	Not Available	786	Open in IMG/M
3300006050\|Ga0075028_100889339	Not Available	548	Open in IMG/M
3300006800\|Ga0066660_10372408	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1168	Open in IMG/M
3300006854\|Ga0075425_102692967	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	548	Open in IMG/M
3300007255\|Ga0099791_10689112	Not Available	502	Open in IMG/M
3300007790\|Ga0105679_10183400	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi	1173	Open in IMG/M
3300009012\|Ga0066710_100238116	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	2624	Open in IMG/M
3300009012\|Ga0066710_100505876	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1821	Open in IMG/M
3300009012\|Ga0066710_100706673	Not Available	1538	Open in IMG/M
3300009090\|Ga0099827_10214517	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1606	Open in IMG/M
3300009090\|Ga0099827_10402982	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1169	Open in IMG/M
3300009090\|Ga0099827_11020941	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	718	Open in IMG/M
3300009094\|Ga0111539_13440695	Not Available	509	Open in IMG/M
3300009137\|Ga0066709_100221490	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	2506	Open in IMG/M
3300009137\|Ga0066709_104296555	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	519	Open in IMG/M
3300009147\|Ga0114129_10018940	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	9807	Open in IMG/M
3300009156\|Ga0111538_12746616	Not Available	617	Open in IMG/M
3300009162\|Ga0075423_12100901	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	613	Open in IMG/M
3300009400\|Ga0116854_1079617	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi	814	Open in IMG/M
3300010044\|Ga0126310_11722467	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	521	Open in IMG/M
3300010047\|Ga0126382_10097628	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1888	Open in IMG/M
3300010166\|Ga0126306_10024341	All Organisms → cellular organisms → Bacteria	4033	Open in IMG/M
3300010166\|Ga0126306_10688260	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	819	Open in IMG/M
3300010362\|Ga0126377_12083180	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi	643	Open in IMG/M
3300010376\|Ga0126381_102256560	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	782	Open in IMG/M
3300010396\|Ga0134126_13012701	Not Available	509	Open in IMG/M
3300011269\|Ga0137392_10576010	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	935	Open in IMG/M
3300011269\|Ga0137392_11498853	Not Available	533	Open in IMG/M
3300011270\|Ga0137391_10130032	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	2189	Open in IMG/M
3300011271\|Ga0137393_11799226	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	501	Open in IMG/M
3300012014\|Ga0120159_1206805	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	521	Open in IMG/M
3300012096\|Ga0137389_11427770	Not Available	587	Open in IMG/M
3300012201\|Ga0137365_11201352	Not Available	542	Open in IMG/M
3300012202\|Ga0137363_11755094	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	513	Open in IMG/M
3300012204\|Ga0137374_10184229	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1819	Open in IMG/M
3300012205\|Ga0137362_10667118	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	895	Open in IMG/M
3300012206\|Ga0137380_11118989	Not Available	671	Open in IMG/M
3300012210\|Ga0137378_10754836	Not Available	885	Open in IMG/M
3300012210\|Ga0137378_10887835	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	804	Open in IMG/M
3300012350\|Ga0137372_10539152	Not Available	863	Open in IMG/M
3300012351\|Ga0137386_11108465	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	558	Open in IMG/M
3300012356\|Ga0137371_10968734	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	646	Open in IMG/M
3300012359\|Ga0137385_10772160	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	799	Open in IMG/M
3300012362\|Ga0137361_10952572	Not Available	777	Open in IMG/M
3300012363\|Ga0137390_10305245	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1574	Open in IMG/M
3300012363\|Ga0137390_10687911	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	986	Open in IMG/M
3300012363\|Ga0137390_10962262	Not Available	807	Open in IMG/M
3300012363\|Ga0137390_11205033	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	704	Open in IMG/M
3300012363\|Ga0137390_11483122	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	620	Open in IMG/M
3300012532\|Ga0137373_10001464	All Organisms → cellular organisms → Bacteria	25719	Open in IMG/M
3300012917\|Ga0137395_10651061	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	762	Open in IMG/M
3300012944\|Ga0137410_11224156	Not Available	647	Open in IMG/M
3300012944\|Ga0137410_11633765	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	565	Open in IMG/M
3300012977\|Ga0134087_10208205	All Organisms → cellular organisms → Bacteria	879	Open in IMG/M
3300013296\|Ga0157374_12793072	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	516	Open in IMG/M
3300013764\|Ga0120111_1024312	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1674	Open in IMG/M
3300013772\|Ga0120158_10245477	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	899	Open in IMG/M
3300013832\|Ga0120132_1026714	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1043	Open in IMG/M
3300014052\|Ga0120109_1042530	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1024	Open in IMG/M
3300014052\|Ga0120109_1125062	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	599	Open in IMG/M
3300014325\|Ga0163163_11541782	Not Available	726	Open in IMG/M
3300015158\|Ga0167622_1049897	Not Available	756	Open in IMG/M
3300015241\|Ga0137418_10946029	Not Available	628	Open in IMG/M
3300015373\|Ga0132257_102072459	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	734	Open in IMG/M
3300015374\|Ga0132255_103302550	Not Available	687	Open in IMG/M
3300018468\|Ga0066662_10678566	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	979	Open in IMG/M
3300021358\|Ga0213873_10108978	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	803	Open in IMG/M
3300021362\|Ga0213882_10214940	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	794	Open in IMG/M
3300021384\|Ga0213876_10269171	All Organisms → cellular organisms → Bacteria	905	Open in IMG/M
3300021384\|Ga0213876_10372443	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	759	Open in IMG/M
3300021384\|Ga0213876_10465749	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	672	Open in IMG/M
3300021388\|Ga0213875_10562955	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	550	Open in IMG/M
3300021861\|Ga0213853_11362659	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	875	Open in IMG/M
3300021861\|Ga0213853_11552803	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	2324	Open in IMG/M
3300021861\|Ga0213853_11607759	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1197	Open in IMG/M
3300021953\|Ga0213880_10161515	Not Available	616	Open in IMG/M
3300025907\|Ga0207645_10794348	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	643	Open in IMG/M
3300025910\|Ga0207684_10121293	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	2241	Open in IMG/M
3300025910\|Ga0207684_10265357	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1482	Open in IMG/M
3300025922\|Ga0207646_11325064	Not Available	628	Open in IMG/M
3300025945\|Ga0207679_10888141	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	815	Open in IMG/M
3300026335\|Ga0209804_1317119	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	527	Open in IMG/M
3300026527\|Ga0209059_1175869	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	747	Open in IMG/M
3300027842\|Ga0209580_10450503	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	641	Open in IMG/M
3300027857\|Ga0209166_10031355	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	3227	Open in IMG/M
3300027857\|Ga0209166_10049999	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	2448	Open in IMG/M
3300027875\|Ga0209283_10887948	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	540	Open in IMG/M
3300027882\|Ga0209590_10491166	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	793	Open in IMG/M
3300027882\|Ga0209590_10835091	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	583	Open in IMG/M
3300031520\|Ga0272428_1002839	All Organisms → cellular organisms → Bacteria	33076	Open in IMG/M
3300034172\|Ga0334913_147202	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	504	Open in IMG/M
3300034384\|Ga0372946_0083004	All Organisms → cellular organisms → Bacteria	1485	Open in IMG/M
3300034384\|Ga0372946_0157970	Not Available	1085	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	85.16%
Host-Associated	Host-Associated	14.84%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	82.03%
Plants	Host-Associated → Plants	14.84%
Aquatic	Environmental → Aquatic	3.12%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	79.69%
Rhizosphere	Host-Associated → Plants → Rhizosphere	7.81%
Roots	Host-Associated → Plants → Roots	3.91%
Rhizoplane	Host-Associated → Plants → Rhizoplane	3.12%
Freshwater	Environmental → Aquatic → Freshwater	2.34%
Rock-Dwelling (Subaerial Biofilms)	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms)	1.56%
Sediment	Environmental → Aquatic → Sediment	0.78%
Rock-Dwelling (Endoliths)	Environmental → Terrestrial → Rock-Dwelling (Endoliths)	0.78%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	68.75%
Loam	Environmental → Terrestrial → Soil → Loam	10.16%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	5.47%
Unclassified	Host-Associated → Plants → Roots → Unclassified	3.12%
Sediment	Environmental → Aquatic → Freshwater → Sediment	2.34%
Soil	Host-Associated → Plants → Rhizosphere → Soil	2.34%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified	1.56%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.56%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	1.56%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.78%
Sand	Environmental → Terrestrial → Soil → Sand	0.78%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Endoliths) → Unclassified	0.78%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.78%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	42.19%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	19.53%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	8.59%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	5.47%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	4.69%
Unclassified	Host-Associated → Plants → Roots → Unclassified → Unclassified	3.12%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	2.34%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	2.34%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	1.56%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	1.56%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified → Unclassified	1.56%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.56%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	1.56%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.78%
Desert	Environmental → Terrestrial → Soil → Unclassified → Desert	0.78%
Desert	Environmental → Terrestrial → Soil → Sand → Desert	0.78%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Endoliths) → Unclassified → Unclassified	0.78%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.78%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	26.56%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	14.84%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	8.59%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	7.81%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost	4.69%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	4.69%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	3.91%
Plant Roots	Host-Associated → Plants → Roots → Unclassified → Unclassified → Plant Roots	3.12%
Watersheds	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Watersheds	2.34%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	2.34%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	2.34%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.56%
Exposed Rock	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified → Unclassified → Exposed Rock	1.56%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.56%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	1.56%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.78%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.78%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.78%
Glacier Forefield Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil	0.78%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.78%
Sub-Biocrust Soil	Environmental → Terrestrial → Soil → Unclassified → Desert → Sub-Biocrust Soil	0.78%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.78%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.78%
Soil	Environmental → Terrestrial → Soil → Sand → Desert → Soil	0.78%
Rock	Environmental → Terrestrial → Rock-Dwelling (Endoliths) → Unclassified → Unclassified → Rock	0.78%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.78%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	0.78%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	0.78%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.78%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.78%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.78%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001661	Mediterranean Blodgett CA OM1_O3 (Mediterranean Blodgett coassembly)	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300005167	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121	Environmental	Open in IMG/M
3300005174	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129	Environmental	Open in IMG/M
3300005181	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005454	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_136	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005534	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen07_05102014_R1	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005537	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1	Environmental	Open in IMG/M
3300005542	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1	Environmental	Open in IMG/M
3300005549	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG	Environmental	Open in IMG/M
3300005552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150	Environmental	Open in IMG/M
3300005555	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141	Environmental	Open in IMG/M
3300005557	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153	Environmental	Open in IMG/M
3300005558	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147	Environmental	Open in IMG/M
3300005559	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149	Environmental	Open in IMG/M
3300005561	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148	Environmental	Open in IMG/M
3300005564	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG	Host-Associated	Open in IMG/M
3300005575	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_151	Environmental	Open in IMG/M
3300005577	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2	Host-Associated	Open in IMG/M
3300006050	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2014	Environmental	Open in IMG/M
3300006800	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109	Environmental	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300007255	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1	Environmental	Open in IMG/M
3300007790	Microbial communities of desert soil contaminated with blood from dead anthrax infected zebra in Etosha National Park, Namibia. Combined Assembly of 14 sequencing projects	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009400	Soil microbial community of the Robinson Ridge, Antarctica. Combined Assembly of Gp0139162, Gp0138857, Gp0138858	Environmental	Open in IMG/M
3300010044	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot60	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010166	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot27	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300012014	Permafrost microbial communities from Nunavut, Canada - A10_80cm_6M	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012204	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012350	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_60_16 metaG	Environmental	Open in IMG/M
3300012351	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaG	Environmental	Open in IMG/M
3300012356	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG	Environmental	Open in IMG/M
3300012359	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300012532	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_80_16 metaG	Environmental	Open in IMG/M
3300012917	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG	Environmental	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012977	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300013296	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG	Host-Associated	Open in IMG/M
3300013764	Permafrost microbial communities from Nunavut, Canada - A28_35cm_6M	Environmental	Open in IMG/M
3300013772	Permafrost microbial communities from Nunavut, Canada - A10_80_0.25M	Environmental	Open in IMG/M
3300013832	Permafrost microbial communities from Nunavut, Canada - A3_5cm_0M	Environmental	Open in IMG/M
3300014052	Permafrost microbial communities from Nunavut, Canada - A23_35cm_12M	Environmental	Open in IMG/M
3300014325	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG	Host-Associated	Open in IMG/M
3300015158	Arctic soil microbial communities from a glacier forefield, Russell Glacier, Kangerlussuaq, Greenland (Sample G1A, Ice margin)	Environmental	Open in IMG/M
3300015241	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300021358	Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3	Host-Associated	Open in IMG/M
3300021362	Barbacenia macrantha exposed rock microbial communities from rupestrian grasslands, the National Park of Serra do Cipo, Brazil - ER_R09	Environmental	Open in IMG/M
3300021384	Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9	Host-Associated	Open in IMG/M
3300021388	Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8	Host-Associated	Open in IMG/M
3300021861	Metatranscriptome of freshwater sediment microbial communities from post-fracked creek in Pennsylvania, United States - ABR_2016 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300021953	Barbacenia macrantha exposed rock microbial communities from rupestrian grasslands, the National Park of Serra do Cipo, Brazil - ER_R07	Environmental	Open in IMG/M
3300025907	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025945	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026335	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139 (SPAdes)	Environmental	Open in IMG/M
3300026527	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_151 (SPAdes)	Environmental	Open in IMG/M
3300027842	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027857	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027875	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027882	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027986	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen07_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300031520	Rock endolithic microbial communities from Victoria Land, Antarctica - Finger Mt nord	Environmental	Open in IMG/M
3300034172	Sub-biocrust soil microbial communities from Mojave Desert, California, United States - 9HMS	Environmental	Open in IMG/M
3300034384	Forest soil microbial communities from Eldorado National Forest, California, USA - SNFC_MG_KNG_2.2	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12053J15887_105805562	3300001661	Forest Soil	MESRTMSPGPQAVLEELRRSALATYGEERSAEARLQTALVAAATALSRVMQEPLEPLGNEPL
Ga0063356_1014626093	3300004463	Arabidopsis Thaliana Rhizosphere	MTPVEDPSRQSVFDDLSRAALETYGEERRAEALLEMALTAAATAVWRVMQEPLDPSGLAPLPAHE*
Ga0066672_107114212	3300005167	Soil	MQHESDGDPARQTVLEELRRHAQETYGEERSAEATLQGALDAAATAVWRVSHEPLEPLGNEPLPTHA*
Ga0066680_100914811	3300005174	Soil	ARQTVLEELRRHAQETYGEERSAEATLTGALDAAATAVWRVSHEPLEPLGYEPLPTHA*
Ga0066678_100374391	3300005181	Soil	VLEELRRHAQETYGEERSAEATLQGALDAAATAVWRVSHEPLEPLGNEPLPTHA*
Ga0066678_104778762	3300005181	Soil	LTEARILSPGPQAVLEELSRAALEFYGEERSAEARLQAALKAAATAVSRVSQEPLDPLGNEPLPTHG*
Ga0066388_1004348562	3300005332	Tropical Forest Soil	MEDNDPARGAVLEQLEQAALETYGEERTAEATLRAALELAATAVWRVAQERLEPLGPEPLPTHD*
Ga0070708_1014834632	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MQPPHDNAARLAVLDELRRAALATYGEERSAEASLQTALNLAATAVWRVTEEPLEPLGNEPLPTDA*
Ga0066687_100659421	3300005454	Soil	MQHDSDDPARLAVLEELRRLALETYGEDRSADLTVQTALGAAATAVWRVSQEPLDPLGNEPLPTHG*
Ga0070706_1000120812	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MSPGPQAVLEELRRSALDTYGEERSAEARLQTALVAAATAVSRVIQEPLEPLGNEPLPTHG*
Ga0070706_1004052292	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MSPGPQAVLEELRRSVLETYGEERSAEARLQTALVSAATAVSRVIQEPLEPLGNEPLPTHG*
Ga0070698_1009396742	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	MQRMPQQSDNAAHLAVLEELRRSALDTYGEERTAEARLQTALVSAATAVWRVSQEPLEPLGNEPLPTHG*
Ga0070698_1016143641	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	MVGLMERESRTMSPGPQAVLEELRRSALDTYGEERSAEGRLQTALVAAATAVSRVIQEPLEPLGNEPLPTHG*
Ga0070698_1021432421	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	PMERESRTMSPGPQAVLEELRRSALDTYGEERSAEARLQTALVAAATAVSRVIQEPLEPLGNEPLPTHG*
Ga0070735_101758742	3300005534	Surface Soil	MATSVHADDPARLAVFDELRQLALQTYGEERAAEKRLQAALKAAANAIWRVSQEPIQPTGDEP*
Ga0070697_1008202642	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	MVGPMERESRTMSPGPQAVLEELRRSALDTYGEERSAEARLQTALVAAATAVSRVIQEPLEPLGNEPLPTHG*
Ga0070730_100130425	3300005537	Surface Soil	MQPRGDDAARLAVLDELRRSAVDTYGEERIADANLEAALNSAATAVWRVSQEPLEPLGNDPLPTHG*
Ga0070730_100456763	3300005537	Surface Soil	VLEELSRSALETYGEERSGEARLQIALGAAATAVWRVSQEPLDPLGNEPLPTHG*
Ga0070730_106960631	3300005537	Surface Soil	MQQQGENLACIGVLEELRTAALETYGEERTAEALLQRALEVAATAVWRVSQEPLEPLGNEPLPTHG*
Ga0070730_108947901	3300005537	Surface Soil	DCPSRPEACGSRSMTDVHEEEPAHQAVLDDLRRCALETYGEERAANATLQTALQLAATAVWRVIQEPLDPAGNEP*
Ga0070732_106440612	3300005542	Surface Soil	MTDVHEEQPAHQAVLDDLRRRALETYGEERAANATLETALQLAATAVWRVIQEPLDPTGNEP*
Ga0070704_1009324662	3300005549	Corn, Switchgrass And Miscanthus Rhizosphere	MATEGLRTGRKCLLMEPRTLAPGPQAVLEELRHAALETYGEERNAEAGLQTALEVAATAVWRVSQETLEPLGNEPLPTHG*
Ga0066701_104965642	3300005552	Soil	MQHESEGDPARQTVLEELRRHAQETYGEERSAEATLQGALDAAATAVWRVSHEPLEPLGYEPLPTHA*
Ga0066692_105069212	3300005555	Soil	MQHESEGDPARQTVLEELRRHAQETYGEERSAEATLTGALDAAATAVWRVSHEPLEPLGYEPLPTHA*
Ga0066704_103273221	3300005557	Soil	LEELRRLALETYGEDRSADLTVQTALGAAATAVWRVSQEPLDPLGNEPLPTHG*
Ga0066698_105494851	3300005558	Soil	MVRPMESRTMSPGPQAVLEELRRSALETYGEERSAESRLQTALVAAATAVSRVMQEPLEPLGNEPLPTHG*
Ga0066698_106974342	3300005558	Soil	MQQQGDNTARLAVLDELRRSALDTYGEERCADANVEAALSLTATAVWRVSQEPLEPLGNEPLPTHG*
Ga0066700_102625672	3300005559	Soil	MESRTMSPGPQAVLEELRRSALETYGEERSAESRLQTALVAAATAVSRVMQEPLEPLGNEPLPTHG*
Ga0066700_103872351	3300005559	Soil	MQHDSDDPARLAVLEELRRLALETYGEERSADLTVQTSLGAAATAVWRVSQEPLDPLGNEPLPTHG*
Ga0066700_106684162	3300005559	Soil	MQHESDGDPARQTVLEELRRHAQETYGEERSAETTLQGALDAAATAVWRVSHEPLEPLGYEPLPTHA*
Ga0066699_102008292	3300005561	Soil	LTEARVLSPGPLAVLEELSRAALEFYGEERSAQARLQAALKAAATAVSRVSQEPLDPLGNEPLPTHG*
Ga0066699_102254232	3300005561	Soil	MQHDSDDPARLAVLEELRRLALETYGEDRSADLTVQTSLGAAATAVWRVSQEPLDPLGNEPLPTHG*
Ga0070664_1021554371	3300005564	Corn Rhizosphere	PHMQDPPTNTSRQAVLDELRRAALETYGEERSAEATLQTALELAATAVWRVSQEVLEPLGPEPLPTHD*
Ga0066702_103127841	3300005575	Soil	MQHDSDDPARLAVLEELRRLALETYGEDRSADLTVQTALGAAATAVWRVSHEPLDPLGNEPLPTHG*
Ga0068857_1010482672	3300005577	Corn Rhizosphere	MNTSRQAVLDELRRAALETYGEERSAESTLQTALELAATAVWRVSQEVLEPLGPEPLPTHD*
Ga0075028_1008893391	3300006050	Watersheds	MEPRTLSIGPQAVLEELRRSALETYGEERSAETRLKFALEAAATAVSRVSQESLDPLGNEPLPTHD
Ga0066660_103724082	3300006800	Soil	MQHDSDDPARLAVLGELRRLALETYGEDRSADLTVQTSLGAAATAVWRVSQEPLDPLGNEPLPTHG*
Ga0075425_1026929672	3300006854	Populus Rhizosphere	MADASENPARGAILEELQRAALATYGEERSAEASVQTAVELAATALWRVGQEPLDLPGPEPLPTHG*
Ga0099791_106891121	3300007255	Vadose Zone Soil	MESRTLSPGPQAVFEELRRSALDTYGEERSAETRLQTALVAAATAVSRVIQEPLEPLGNEPLPTHG*
Ga0105679_101834002	3300007790	Soil	MAPQSDNAAHEAVLEELRRSALATYGEERSGEATLQTALSLAATAIWRVSQEPLEPMGPEPLPTHG*
Ga0066710_1002381162	3300009012	Grasslands Soil	MQPQNDNAARLAVLEELRRAALATYGEERSADASLRTALNLAATAVWRVSEEPLEPLGNEPLPTHG
Ga0066710_1005058761	3300009012	Grasslands Soil	MQGNDPARRAVLEQLEQAALETYGEERSAEATLRTALELAATAVWRVAQERLEPLGTEPLPTHD
Ga0066710_1007066732	3300009012	Grasslands Soil	MVRPMESRTMSPGPQAVLEELRRSALETYGEERSAETRLQTALVAAATAVSRVMQEPLEPLGNEPLPTHG
Ga0099827_102145172	3300009090	Vadose Zone Soil	MPSMQPQNDNAARLAVLEELRRAALATYGEERSAEASLQTVLNLAATAVWRVSEESLEPLGNEPLPTDA*
Ga0099827_104029822	3300009090	Vadose Zone Soil	MESRTMSPGPQAVLEELRRSALETYGEERSAETRLQTALEAAATAVSRVMQEPLEPLGNEPLPTHG*
Ga0099827_110209412	3300009090	Vadose Zone Soil	MPSMQPLNDNAARLAVLEELRRAALATYGEERSVEASLQTALNLAATAVWRVSEEPLEPLGNEPLPTDA*
Ga0111539_134406952	3300009094	Populus Rhizosphere	MPDPAENPARRAVLEELQRSALETYGEERGAEASLQTALEVAATAVWRVAQESLEPLGPEPLPTHG*
Ga0066709_1002214903	3300009137	Grasslands Soil	MPSMQPQNDNAARLAVLEELRRAALATYGEERSADASLRTALNLAATAVWRVSEEPLEPLGNEPLPTHG*
Ga0066709_1042965551	3300009137	Grasslands Soil	MQHDSDDPARLAVLEELRRLALETYGEERSAELRLQTALDAAATAVWRVRQEPLDPLGLEPLPTHG*
Ga0114129_100189402	3300009147	Populus Rhizosphere	MGVMQDPAVNPARQAVFDELERSALDTYGEERTAEVALQTVLGRAATAVWRISQESLEPMGPEPLPTHG*
Ga0111538_127466162	3300009156	Populus Rhizosphere	MHDQAENPARQALLEELRRSALDTYGEERSAEATVQTALELAATALWRLGQETLEPLGPEPLPTHG*
Ga0075423_121009012	3300009162	Populus Rhizosphere	MQQQADAGVGHHATSARLAVLDELRRSALATYGEERSTEARLQAALNAAATAVWRVTQEPLEPPGNEPLPTHG*
Ga0116854_10796172	3300009400	Soil	MQQHSDNTAHMAVLEELRRAALATYGEERSGEATLQAALSLAATAVWRVSQEALEPLGNEPLPTYA*
Ga0126310_117224672	3300010044	Serpentine Soil	DNTARLAVLDELRRSALDTYGEERCAEASLQAALGVAATAVWRVSQESLEPLGPEPLPTHA*
Ga0126382_100976282	3300010047	Tropical Forest Soil	MQDAADDPARRAVLEELQQAALAMYGEERSAESTLQAALEVAAAAIWRVGQERIQLLGPEPLPTHD*
Ga0126306_100243413	3300010166	Serpentine Soil	MHDPAVDPGRLALLDELRLAAVATYGEERVAEQPVQMALAAAATAVWRVSLEQLEPSGPEPLRTHA*
Ga0126306_106882601	3300010166	Serpentine Soil	MRSMQPQGENAAHLAALEELRRSALDTYGEERSAEATLQAALAATATAIWRVSEEPLEPFGLEPLPTHG*
Ga0126377_120831801	3300010362	Tropical Forest Soil	MQEHTDNAARLVFLEELRRSALETYGEDRGAEASLQTALEAAATAVWRVSQETLEPQGHEPLPTHG*
Ga0126381_1022565601	3300010376	Tropical Forest Soil	NDPARGAVLEQLEQAALETYGEERTAEATLRAALELAATAVWRVAQERLEPLGPEPLPTHD*
Ga0134126_130127011	3300010396	Terrestrial Soil	MQHQGDDAARLAVLEQLRRAALDTYGEDRVAEASVQAALGLAATAVWRVSQEPLELPGNDPLPTDA*
Ga0137392_105760102	3300011269	Vadose Zone Soil	MVASMESRTMSPGPQAVLEELRRSALATYGEERSAEARLQTALVAAATAVSRVMQEPLEPLGNEPLPTHG*
Ga0137392_114988532	3300011269	Vadose Zone Soil	MPSMQAQNDNAARLAVLEELRRAALATYGEERSAEARLQTALSAAATAVWRVSEESLDPLGNEPLPTHG*
Ga0137391_101300323	3300011270	Vadose Zone Soil	MVRSMESRAMSPGPQAVLEELRRSALETYGEERSAEARLQTALLAAATAVSRVIQEPLEPLGNEPLPTHG*
Ga0137393_117992262	3300011271	Vadose Zone Soil	MQQQGDNAARKAVLEELRRAALETFGEERSAEASLQTALGLAATAVWRVSQEPLEPLGHEPLPTHA*
Ga0120159_12068052	3300012014	Permafrost	PAADHDELRRSAIDTYGEERIADANVEAALNLAATAVWRVSEEPLEPLGNEPLPTHA*
Ga0137389_114277702	3300012096	Vadose Zone Soil	MSPAPQAVLEELRRSALETYGEERSAEARLQTALVAAATAVSRVMQEPLEPLGNEPLPTHG*
Ga0137365_112013522	3300012201	Vadose Zone Soil	MVRPMESRTMSPGPQAVLEELRRSVLETYGEERSAETRLQTALVAAATAVSRVMQEPLEPLGNEPLPTHG*
Ga0137363_117550942	3300012202	Vadose Zone Soil	MPSMQPQNDNAARLAVFEELRRAALATYGEERSAEASLQTMLNLAATAVWRVSEEPLEPLGNEPLPTDA*
Ga0137374_101842292	3300012204	Vadose Zone Soil	VTQNAADNPARSAVFDELERAALDTYGEERTAEAGLQMMLGRAATAVWRISQESLDLMGPEPLPTHG*
Ga0137362_106671182	3300012205	Vadose Zone Soil	MVRPMESRTMSPGPQAVLEELRRSALETYGEERSAETRLQTALEAAATAVSRVMQEPLEPLGNEPLPTHG*
Ga0137380_111189892	3300012206	Vadose Zone Soil	MESRTMSPGPQAVLEELRRSALETYGEERSAETRLQTALVAAATAVSRVMQEPLEPLGNEPLPTHG*
Ga0137378_107548362	3300012210	Vadose Zone Soil	VLDELHRAALATYGEERSAEARLQTALGAAATAVWRVSEESLEPLGNEPLPTHG*
Ga0137378_108878351	3300012210	Vadose Zone Soil	MVRPMESRTMSPGPQAVLDELRRSALETYGEERRPETRLQTALVAAATAVSRVMQEPLEPLGNEPLPTHG*
Ga0137372_105391522	3300012350	Vadose Zone Soil	VTQNAADNPARRAVFDELERAALDTYGEERTAEAGLQMMLGRAATAVWRISQESLDLMGPEPLPTHG*
Ga0137386_111084651	3300012351	Vadose Zone Soil	ARDVQEEVPRSAHETYGGEQSPETRLQTALVAAATAVSRVMQEPLEPLGNEPLPTHG*
Ga0137371_109687342	3300012356	Vadose Zone Soil	MAGLMEPRTLSTGPQAVLEELRRSALETYGEERSSEARLQTALGAAAMAVWRVSEETLDPLGNEPLPTHG*
Ga0137385_107721602	3300012359	Vadose Zone Soil	MVRPMESRTMSPGPQAVLEELRRSALETYGEERSAETRLQTALVAAATAVSRVMQEPLEPLGNEPLPTHG*
Ga0137361_109525721	3300012362	Vadose Zone Soil	MESRTMSPGPQAVLEELRRSALETYGEERSAETRLQTALEAAATAVSRVMQEPLEPLGNEPLPTH
Ga0137390_103052451	3300012363	Vadose Zone Soil	AMSPGPQAVLEELRRSALETYGEERSAEARLQTALLAAATAVSRVIQEPLEPLGNEPLPTHG*
Ga0137390_106879111	3300012363	Vadose Zone Soil	AARLAVLEELRRAALATYGEERSVEASLQTALNLAATAVWRVSEEPLEPLGNEPLPTDA*
Ga0137390_109622621	3300012363	Vadose Zone Soil	MVASMESRTMSPGPQAVLEELRRSALETYGEERSAETRLQTVLVAAATAVSRVIQEPLEPLGNEPLPTHG*
Ga0137390_112050332	3300012363	Vadose Zone Soil	WLMESRTMSPGPQAVLEELHRAALATYGEERSAEARLQTALSAAATAVWRVSEESLDPLGNEPLPTHG*
Ga0137390_114831222	3300012363	Vadose Zone Soil	MQVTVVQDEKDDPARLAVLEELRRRAVETYGEDRAAEATLTAALAGAATAVWRVSQESLDPTGSEPLPTHD*
Ga0137373_1000146431	3300012532	Vadose Zone Soil	VTQNAADNPARRAVFDELERAALDTYGEERTAEAGLQMMLGRAATAVWRISQESLDLMGPEPMPTHG*
Ga0137395_106510612	3300012917	Vadose Zone Soil	QQQGDNTARLAVLDELRRSALDTYGEERCADANVEAALSLTATAVWRVSQEPLEPLGNEPLPTHG*
Ga0137410_112241562	3300012944	Vadose Zone Soil	MVTSMESRAMSPGPQAVLEELRRSALETYGEERSAEARLQTALLAAATAVSRVIQEPLEPLGNEPLPTHG*
Ga0137410_116337652	3300012944	Vadose Zone Soil	MPSMQPQNDNAARLAVFEELRRAALATYGEERSAEASLQTVLNLAATAVWRVSEEPLEPLGNEPLPTDA*
Ga0134087_102082052	3300012977	Grasslands Soil	VLEELRRLALETYGEDRSADLTVQTALGAAATAVWRVSHEPLDPLGNEPLPTHG*
Ga0157374_127930721	3300013296	Miscanthus Rhizosphere	QPGDDAARVAVLDELRRSSIDTYGEERVADANLEAALNLAATAVWRVSQELLEPFGDDPLPTHG*
Ga0120111_10243122	3300013764	Permafrost	MQEQGDNAARLAVLDELRRSALETYGEERIADVNLEAALNLAATAVWRVSEEPLEPLGNEPLPTHA*
Ga0120158_102454772	3300013772	Permafrost	MQEQGDNAARLAVLDELRRSALETYGEERIADVNVEAALNLAATAVWRVSEEPLEPLGNEPLPTHA*
Ga0120132_10267142	3300013832	Permafrost	MQQLSDNAARLAVLDGLRRSALDTYGEERCADVNVEAALNLTATAVWRVSEEPLEPLGNEPLPTHG*
Ga0120109_10425302	3300014052	Permafrost	MQHQGDDAARLAVFDELRRSAIDTYGEERIADTNLQAALNLAATAVWRVSQEPLEPLGNEPLPTHG*
Ga0120109_11250622	3300014052	Permafrost	MQEQADNAARLAVLDELRRSALETYGEERIADVNVEAALDVAATAVWRVSEEPLEPLGNEPLPTHA*
Ga0163163_115417822	3300014325	Switchgrass Rhizosphere	MQDPPTNTSRQAVLDELRRAALDTYGEERSAEATVQTALELAATALWRLGQETLEPLGPEPLP
Ga0167622_10498971	3300015158	Glacier Forefield Soil	MQQQGDNAARLAVLDELRRSAQETYGEERCADAHVEAALSATATAVWRVNQEPLEPLGNEPLPTHA*
Ga0137418_109460292	3300015241	Vadose Zone Soil	MVWSMESRTMSPGPQAVLEELRRSALATYGEERSAEARLQTALVAAATAVSRVMQEPLEPLGNEPLPTHG*
Ga0132257_1020724591	3300015373	Arabidopsis Rhizosphere	LLEELRRSALDTYGEERCAEAHVQAALELAATALWRLGQETLEPLGPEPLPTHG*
Ga0132255_1033025502	3300015374	Arabidopsis Rhizosphere	MHDQAENPARQALLEELRRSALDTYGEERSAEATVQTALELAATALWRLGQETLEPLGPKPLPTHG*
Ga0066662_106785661	3300018468	Grasslands Soil	MQHDSDDPARLAVLEELRRLALETYGEDRSADLTVQTSLGAAATAVWRVSQEPLDPLGNEPLPTHG
Ga0213873_101089782	3300021358	Rhizosphere	VPDDDPARDAVLTELRRAAMETYGEDRAAEATLQAALQLAATALWRVTQESLDPAGNEP
Ga0213882_102149402	3300021362	Exposed Rock	VPDDDPARDAVLTELRRAAMETYGEDRAAEATLQAALQLAATAVWRVTQESLDPAGNEP
Ga0213876_102691712	3300021384	Plant Roots	VQPLDADPARAAVLDELRRAALEIYGEERAAEARLQIALEAAATAVWRVSQAALEPQGPEPLPTHD
Ga0213876_103724432	3300021384	Plant Roots	RLPQVSSSPIPQPAAPQDGDPARAAVLDELRRSALEVYGEERAAEATLASALEAAATAVWRVTQTALEPLGPEPLPTHD
Ga0213876_104657491	3300021384	Plant Roots	VSQSASPHDTDPARAAVLDELRRSALDVYGEERAAEATLATALEAAATAVWRVTQTALEPLGPEPLPTHD
Ga0213875_105629551	3300021388	Plant Roots	VQSPGDAIETDPARAAVLDELQRAALNVYGEERAAETRLKMALEAAATAIWRVSQAALEPQGPAPLPTHD
Ga0213853_113626592	3300021861	Watersheds	MQEQGEDAARLAVLDELRRSARDTYGEERCADANVEAALASTATAIWRVSQEPLELLGNEPFPTHG
Ga0213853_115528033	3300021861	Watersheds	MQQQGDDAARLAVLDELRRSAMDTFGEERIADADVEAALRLAATAVWRVSQEPLEPLGNEPLPTHG
Ga0213853_116077591	3300021861	Watersheds	MQHHGDDAARLAVLEELRRSALSVYGEERCAETSLQIALGLAATAIWRVSQEPLDPLGYDPLPTDA
Ga0213880_101615152	3300021953	Exposed Rock	VQIPDADPARAAVLDELRRAALDVYGEERAAEATLRVALEAAATAVWRVSQEVLEPHGPEPLPTHD
Ga0207645_107943482	3300025907	Miscanthus Rhizosphere	PCPGVACSGMQEQGDDAARLAVLDELRRAALDTYGEERCADVNLETALKLAATAVWRVSQERLEPFGNEPVPFHA
Ga0207684_101212932	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MSPGPQAVLEELRRSALDTYGEERSAEARLQTALVAAATAVSRVIQEPLEPLGNEPLPTH
Ga0207684_102653572	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MSPGPQAVLEELRRSVLETYGEERSAEARLQTALVSAATAVSRVIQEPLEPLGNEPLPTH
Ga0207646_113250642	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	MVGPMERESRTMSPGPQAVLEELRRSALDTYGEERSAEARLQTALVAAATAVSRVIQEPLEPLGNEPLPTHG
Ga0207679_108881411	3300025945	Corn Rhizosphere	RQAVLDELRRAALDTYGEDRSAEATLQTALGLAATAVWRVSQEVLEPLGPEPLPTHD
Ga0209804_13171192	3300026335	Soil	MQHESDGDPARQTVLEELRRHAQETYGEERSAEATLQGALDAAATAVWRVSHEPLEPLGNEPLPTHA
Ga0209059_11758691	3300026527	Soil	AVLEELRRLALETYGEDRSADLTVQTALGAAATAVWRVSHEPLDPLGNEPLPTHG
Ga0209580_104505032	3300027842	Surface Soil	MTDVHEEQPAHQAVLDDLRRRALETYGEERAANATLETALQLAATAVWRVIQEPLDPTGNEP
Ga0209166_100313553	3300027857	Surface Soil	VLEELSRSALETYGEERSGEARLQIALGAAATAVWRVSQEPLDPLGNEPLPTHG
Ga0209166_100499992	3300027857	Surface Soil	MQPRGDDAARLAVLDELRRSAVDTYGEERIADANLEAALNSAATAVWRVSQEPLEPLGNDPLPTHG
Ga0209283_108879482	3300027875	Vadose Zone Soil	PQAVLEELRRAALATYGEERSAEARLQTALSAAATAVWRVSEESLDPLGNEPLPTHG
Ga0209590_104911662	3300027882	Vadose Zone Soil	MPSMQPQNDSAARLAVLEELRRAALATYGEERSAEASLQTVLNLAATAVWRVSEESLEPLGNEPLPTDA
Ga0209590_108350912	3300027882	Vadose Zone Soil	MQHDSDDPARLAVLEELRRLALETYGEERSAELRLQTALDAAATAVWRVRQEPLDPLGFEPLPTHG
Ga0209168_101244631	3300027986	Surface Soil	MATSVHADDPARLAVFDELRQLALQTYGEERAAEKRLQAALKAAANAIWRVSQEPIQPTGDEP
Ga0272428_100283915	3300031520	Rock	MQQQGDNAARLAVLNELRRSALETYGDERSADANVETALHVTAAALWRVSQEPLEPLGDEPLPTHG
Ga0334913_147202_74_274	3300034172	Sub-Biocrust Soil	MQQEGNNAARVAVLDELRRSALETYGEERCADVNVEAALSLTATAVWRVTQEPLEPLGNEPLPTHG
Ga0372946_0083004_1039_1239	3300034384	Soil	MPPQSDNAARQAVLEELSRSALNTYGEERSGEATLRAALEVAATAIWRVGQEALEPLGPEPLPTHG
Ga0372946_0157970_638_847	3300034384	Soil	MRSMQPQNDSVARLAMLEELRRAALATYGEERSAEASLQTALNSAATALCRVNEELVEPLGNEPLPTHG

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F064532

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences