Metagenome Family F064503

Basic Information
Family ID	F064503
Family Type	Metagenome
Number of Sequences	128
Average Sequence Length	64 residues
Representative Sequence	MNPAEADLVRHELASLTRRAEAAESSRDQYKRERDEARAILARVRTSLNEAHNDPADDGRPTGSEP
Number of Associated Samples	42
Number of Associated Scaffolds	128

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	48.44 %
% of genes near scaffold ends (potentially truncated)	39.84 %
% of genes from short scaffolds (< 2000 bps)	65.62 %
Associated GOLD sequencing projects	29
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.53

Most Common Taxonomy
Group	Bacteria (83.594 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere (37.500 % of family members)
Environment Ontology (ENVO)	Unclassified (72.656 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (96.875 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 54.26% β-sheet: 0.00% Coil/Unstructured: 45.74%
Feature Viewer

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Pfam ID	Name	% Frequency in 128 Family Scaffolds
PF12728	HTH_17	40.62
PF09250	Prim-Pol	7.03
PF05930	Phage_AlpA	4.69
PF00589	Phage_integrase	3.91
PF03869	Arc	1.56
PF13356	Arm-DNA-bind_3	0.78
PF01402	RHH_1	0.78

COG ID	Name	Functional Category	% Frequency in 128 Family Scaffolds
COG3311	DNA-binding transcriptional regulator AlpA	Transcription [K]	4.69

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	88.28 %
Unclassified	root	N/A	11.72 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	83.59 %
Unclassified	root	N/A	11.72 %
Viruses	superkingdom	All Organisms → Viruses	4.69 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	83.59 %
Unclassified	root	N/A	11.72 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	4.69 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	60.94 %
Unclassified	root	N/A	11.72 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	4.69 %

Name	Rank	Taxonomy	Distribution
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	32.81 %
Unclassified	root	N/A	11.72 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	4.69 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	2.34 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.78 %

Name	Rank	Taxonomy	Distribution
Xanthomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales	22.66 %
Unclassified	root	N/A	11.72 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	4.69 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	1.56 %
Sphingomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	11.72 %
Xanthomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae	7.03 %
Rhodanobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Rhodanobacteraceae	4.69 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	4.69 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	1.56 %
Sphingomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	11.72 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	4.69 %
Lysobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae → Lysobacter	3.91 %
Rhodanobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Rhodanobacteraceae → Rhodanobacter	1.56 %
Stenotrophomonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae → Stenotrophomonas	1.56 %
Burkholderia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Burkholderia	1.56 %
Xanthomonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae → Xanthomonas	0.78 %
unclassified Sphingomonadaceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → unclassified Sphingomonadaceae	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	11.72 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	4.69 %
Lysobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae → Lysobacter	3.91 %
unclassified Rhodanobacter	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Rhodanobacteraceae → Rhodanobacter → unclassified Rhodanobacter	1.56 %
Sphingomonadaceae bacterium PASS1	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → unclassified Sphingomonadaceae → Sphingomonadaceae bacterium PASS1	0.78 %
Stenotrophomonas maltophilia group	species group	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae → Stenotrophomonas → Stenotrophomonas maltophilia group	0.78 %
pseudomallei group	species group	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Burkholderia → pseudomallei group	0.78 %
Xanthomonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae → Xanthomonas	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	11.72 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	4.69 %
Lysobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae → Lysobacter	3.91 %
Rhodanobacter sp. C06	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Rhodanobacteraceae → Rhodanobacter → unclassified Rhodanobacter → Rhodanobacter sp. C06	1.56 %
Burkholderia pseudomallei	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Burkholderia → pseudomallei group → Burkholderia pseudomallei	0.78 %
Stenotrophomonas maltophilia	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae → Stenotrophomonas → Stenotrophomonas maltophilia group → Stenotrophomonas maltophilia	0.78 %
Sphingomonadaceae bacterium PASS1	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → unclassified Sphingomonadaceae → Sphingomonadaceae bacterium PASS1	0.78 %
Xanthomonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae → Xanthomonas	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	11.72 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	4.69 %
Lysobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae → Lysobacter	3.91 %
Rhodanobacter sp. C06	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Rhodanobacteraceae → Rhodanobacter → unclassified Rhodanobacter → Rhodanobacter sp. C06	1.56 %
Stenotrophomonas maltophilia Ab55555	strain	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae → Stenotrophomonas → Stenotrophomonas maltophilia group → Stenotrophomonas maltophilia → Stenotrophomonas maltophilia Ab55555	0.78 %
Burkholderia pseudomallei	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Burkholderia → pseudomallei group → Burkholderia pseudomallei	0.78 %
Sphingomonadaceae bacterium PASS1	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → unclassified Sphingomonadaceae → Sphingomonadaceae bacterium PASS1	0.78 %
Xanthomonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae → Xanthomonas	0.78 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001915\|JGI24741J21665_1031176	All Organisms → cellular organisms → Bacteria	798	Open in IMG/M
3300005327\|Ga0070658_10007332	All Organisms → cellular organisms → Bacteria → Proteobacteria	8909	Open in IMG/M
3300005327\|Ga0070658_10059717	All Organisms → cellular organisms → Bacteria	3105	Open in IMG/M
3300005327\|Ga0070658_10062892	All Organisms → cellular organisms → Bacteria → Proteobacteria	3025	Open in IMG/M
3300005327\|Ga0070658_10065308	All Organisms → cellular organisms → Bacteria → Proteobacteria	2969	Open in IMG/M
3300005327\|Ga0070658_10116713	All Organisms → cellular organisms → Bacteria → Proteobacteria	2215	Open in IMG/M
3300005327\|Ga0070658_10121609	All Organisms → cellular organisms → Bacteria → Proteobacteria	2169	Open in IMG/M
3300005327\|Ga0070658_10144652	All Organisms → cellular organisms → Bacteria	1987	Open in IMG/M
3300005327\|Ga0070658_10366039	All Organisms → cellular organisms → Bacteria	1235	Open in IMG/M
3300005327\|Ga0070658_10621434	All Organisms → cellular organisms → Bacteria	937	Open in IMG/M
3300005327\|Ga0070658_11569349	All Organisms → cellular organisms → Bacteria	570	Open in IMG/M
3300005329\|Ga0070683_100037306	All Organisms → cellular organisms → Bacteria → Proteobacteria	4448	Open in IMG/M
3300005329\|Ga0070683_100139585	All Organisms → cellular organisms → Bacteria → Proteobacteria	2296	Open in IMG/M
3300005329\|Ga0070683_102036576	Not Available	551	Open in IMG/M
3300005336\|Ga0070680_100049308	All Organisms → cellular organisms → Bacteria	3432	Open in IMG/M
3300005336\|Ga0070680_100111205	All Organisms → cellular organisms → Bacteria	2280	Open in IMG/M
3300005336\|Ga0070680_100136451	All Organisms → Viruses → Predicted Viral	2055	Open in IMG/M
3300005336\|Ga0070680_100364909	All Organisms → cellular organisms → Bacteria	1228	Open in IMG/M
3300005336\|Ga0070680_100469166	All Organisms → cellular organisms → Bacteria → Proteobacteria	1076	Open in IMG/M
3300005336\|Ga0070680_100983381	All Organisms → cellular organisms → Bacteria	728	Open in IMG/M
3300005336\|Ga0070680_101531999	All Organisms → cellular organisms → Bacteria	577	Open in IMG/M
3300005336\|Ga0070680_101732680	All Organisms → cellular organisms → Bacteria → Proteobacteria	541	Open in IMG/M
3300005337\|Ga0070682_101309542	All Organisms → cellular organisms → Bacteria	616	Open in IMG/M
3300005337\|Ga0070682_101988317	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae → Lysobacter	511	Open in IMG/M
3300005339\|Ga0070660_100060086	All Organisms → cellular organisms → Bacteria → Proteobacteria	2949	Open in IMG/M
3300005339\|Ga0070660_100204969	All Organisms → cellular organisms → Bacteria	1600	Open in IMG/M
3300005339\|Ga0070660_100209696	All Organisms → cellular organisms → Bacteria → Proteobacteria	1581	Open in IMG/M
3300005339\|Ga0070660_100340796	All Organisms → cellular organisms → Bacteria → Proteobacteria	1233	Open in IMG/M
3300005339\|Ga0070660_100432416	All Organisms → cellular organisms → Bacteria	1090	Open in IMG/M
3300005339\|Ga0070660_100764844	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae → Xanthomonas	811	Open in IMG/M
3300005344\|Ga0070661_100061769	All Organisms → Viruses → Predicted Viral	2750	Open in IMG/M
3300005344\|Ga0070661_100339526	All Organisms → cellular organisms → Bacteria → Proteobacteria	1176	Open in IMG/M
3300005344\|Ga0070661_100961282	All Organisms → cellular organisms → Bacteria → Proteobacteria	707	Open in IMG/M
3300005366\|Ga0070659_101447116	All Organisms → cellular organisms → Bacteria → Proteobacteria	611	Open in IMG/M
3300005366\|Ga0070659_101560977	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales	589	Open in IMG/M
3300005455\|Ga0070663_100065555	All Organisms → cellular organisms → Bacteria → Proteobacteria	2629	Open in IMG/M
3300005455\|Ga0070663_100447958	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1063	Open in IMG/M
3300005455\|Ga0070663_101908296	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae → Lysobacter	534	Open in IMG/M
3300005458\|Ga0070681_10035063	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales	5040	Open in IMG/M
3300005458\|Ga0070681_10448239	All Organisms → cellular organisms → Bacteria → Proteobacteria	1202	Open in IMG/M
3300005458\|Ga0070681_11882884	All Organisms → cellular organisms → Bacteria	525	Open in IMG/M
3300005530\|Ga0070679_101177635	All Organisms → cellular organisms → Bacteria	711	Open in IMG/M
3300005535\|Ga0070684_100980093	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae → Lysobacter	793	Open in IMG/M
3300005539\|Ga0068853_100314077	All Organisms → cellular organisms → Bacteria	1452	Open in IMG/M
3300005563\|Ga0068855_100453711	All Organisms → cellular organisms → Bacteria → Proteobacteria	1398	Open in IMG/M
3300005563\|Ga0068855_101224949	Not Available	779	Open in IMG/M
3300005577\|Ga0068857_100069834	All Organisms → cellular organisms → Bacteria → Proteobacteria	3128	Open in IMG/M
3300005577\|Ga0068857_100092656	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	2705	Open in IMG/M
3300005577\|Ga0068857_100250836	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae	1622	Open in IMG/M
3300005577\|Ga0068857_100389938	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1294	Open in IMG/M
3300005578\|Ga0068854_101032233	All Organisms → cellular organisms → Bacteria	729	Open in IMG/M
3300005578\|Ga0068854_102067918	All Organisms → cellular organisms → Bacteria	525	Open in IMG/M
3300005616\|Ga0068852_100204824	All Organisms → cellular organisms → Bacteria → Proteobacteria	1868	Open in IMG/M
3300005616\|Ga0068852_100517136	All Organisms → cellular organisms → Bacteria	1191	Open in IMG/M
3300005834\|Ga0068851_10870506	All Organisms → cellular organisms → Bacteria	563	Open in IMG/M
3300006804\|Ga0079221_10026983	All Organisms → cellular organisms → Bacteria	2397	Open in IMG/M
3300009093\|Ga0105240_10102068	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales	3487	Open in IMG/M
3300009093\|Ga0105240_10131544	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	3001	Open in IMG/M
3300009093\|Ga0105240_10492681	All Organisms → cellular organisms → Bacteria	1364	Open in IMG/M
3300009093\|Ga0105240_11246556	Not Available	786	Open in IMG/M
3300009093\|Ga0105240_12784100	Not Available	503	Open in IMG/M
3300010371\|Ga0134125_12270288	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	590	Open in IMG/M
3300010373\|Ga0134128_12779703	Not Available	539	Open in IMG/M
3300010396\|Ga0134126_10295736	Not Available	1902	Open in IMG/M
3300013100\|Ga0157373_10448793	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	928	Open in IMG/M
3300013102\|Ga0157371_10118710	Not Available	1880	Open in IMG/M
3300013102\|Ga0157371_10241102	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales	1301	Open in IMG/M
3300013102\|Ga0157371_10577101	All Organisms → cellular organisms → Bacteria → Proteobacteria	835	Open in IMG/M
3300013104\|Ga0157370_10049521	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales	4020	Open in IMG/M
3300013104\|Ga0157370_10073741	All Organisms → cellular organisms → Bacteria → Proteobacteria	3220	Open in IMG/M
3300013104\|Ga0157370_10239190	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Rhodanobacteraceae → Rhodanobacter → unclassified Rhodanobacter → Rhodanobacter sp. C06	1680	Open in IMG/M
3300013104\|Ga0157370_10826392	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	842	Open in IMG/M
3300013105\|Ga0157369_10128876	All Organisms → Viruses → Predicted Viral	2682	Open in IMG/M
3300013105\|Ga0157369_10385432	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1455	Open in IMG/M
3300013307\|Ga0157372_10790267	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales	1103	Open in IMG/M
3300013307\|Ga0157372_11462281	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales	787	Open in IMG/M
3300013307\|Ga0157372_11545231	All Organisms → cellular organisms → Bacteria → Proteobacteria	764	Open in IMG/M
3300013307\|Ga0157372_12513050	Not Available	591	Open in IMG/M
3300025909\|Ga0207705_10006833	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Burkholderia → pseudomallei group → Burkholderia pseudomallei	8431	Open in IMG/M
3300025909\|Ga0207705_10010116	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	6867	Open in IMG/M
3300025909\|Ga0207705_10018669	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales	4960	Open in IMG/M
3300025909\|Ga0207705_10047856	All Organisms → cellular organisms → Bacteria → Proteobacteria	3075	Open in IMG/M
3300025909\|Ga0207705_10050279	All Organisms → cellular organisms → Bacteria	3000	Open in IMG/M
3300025909\|Ga0207705_10050442	All Organisms → Viruses → Predicted Viral	2996	Open in IMG/M
3300025909\|Ga0207705_10050711	All Organisms → cellular organisms → Bacteria → Proteobacteria	2987	Open in IMG/M
3300025909\|Ga0207705_10092599	Not Available	2215	Open in IMG/M
3300025909\|Ga0207705_10215112	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae → Lysobacter	1458	Open in IMG/M
3300025909\|Ga0207705_10242857	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Rhodanobacteraceae	1372	Open in IMG/M
3300025909\|Ga0207705_10999751	Not Available	646	Open in IMG/M
3300025912\|Ga0207707_10017055	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales	6326	Open in IMG/M
3300025912\|Ga0207707_10020083	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales	5830	Open in IMG/M
3300025912\|Ga0207707_10049379	All Organisms → cellular organisms → Bacteria	3665	Open in IMG/M
3300025912\|Ga0207707_10054454	All Organisms → cellular organisms → Bacteria → Proteobacteria	3482	Open in IMG/M
3300025912\|Ga0207707_10102082	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Burkholderia	2507	Open in IMG/M
3300025912\|Ga0207707_10279640	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → unclassified Sphingomonadaceae → Sphingomonadaceae bacterium PASS1	1446	Open in IMG/M
3300025912\|Ga0207707_10332276	All Organisms → cellular organisms → Bacteria → Proteobacteria	1311	Open in IMG/M
3300025913\|Ga0207695_10168511	All Organisms → cellular organisms → Bacteria	2117	Open in IMG/M
3300025913\|Ga0207695_10244974	All Organisms → cellular organisms → Bacteria → Proteobacteria	1693	Open in IMG/M
3300025913\|Ga0207695_10542200	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Rhodanobacteraceae	1045	Open in IMG/M
3300025917\|Ga0207660_10200790	All Organisms → cellular organisms → Bacteria → Proteobacteria	1557	Open in IMG/M
3300025917\|Ga0207660_10502667	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Rhodanobacteraceae	984	Open in IMG/M
3300025919\|Ga0207657_10181687	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales	1700	Open in IMG/M
3300025919\|Ga0207657_10209650	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1564	Open in IMG/M
3300025919\|Ga0207657_10210932	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Rhodanobacteraceae → Rhodanobacter → unclassified Rhodanobacter → Rhodanobacter sp. C06	1559	Open in IMG/M
3300025920\|Ga0207649_10376110	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae → Stenotrophomonas	1058	Open in IMG/M
3300025920\|Ga0207649_10840572	All Organisms → cellular organisms → Bacteria	718	Open in IMG/M
3300025920\|Ga0207649_11137735	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Rhodanobacteraceae	616	Open in IMG/M
3300025921\|Ga0207652_10015240	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae → Lysobacter	6238	Open in IMG/M
3300025921\|Ga0207652_10070373	All Organisms → cellular organisms → Bacteria	3038	Open in IMG/M
3300025921\|Ga0207652_10619754	All Organisms → cellular organisms → Bacteria → Proteobacteria	969	Open in IMG/M
3300025932\|Ga0207690_10061963	All Organisms → Viruses → Predicted Viral	2544	Open in IMG/M
3300025932\|Ga0207690_11267472	Not Available	616	Open in IMG/M
3300025945\|Ga0207679_11691813	Not Available	579	Open in IMG/M
3300025949\|Ga0207667_10043389	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	4772	Open in IMG/M
3300025949\|Ga0207667_10071883	Not Available	3596	Open in IMG/M
3300025949\|Ga0207667_10275044	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales	1721	Open in IMG/M
3300025949\|Ga0207667_10275171	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales	1721	Open in IMG/M
3300025949\|Ga0207667_10328584	All Organisms → cellular organisms → Bacteria → Proteobacteria	1561	Open in IMG/M
3300025949\|Ga0207667_11683814	All Organisms → cellular organisms → Bacteria → Proteobacteria	601	Open in IMG/M
3300026041\|Ga0207639_10203571	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1699	Open in IMG/M
3300026067\|Ga0207678_10101137	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales	2462	Open in IMG/M
3300026067\|Ga0207678_10147332	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae → Stenotrophomonas → Stenotrophomonas maltophilia group → Stenotrophomonas maltophilia → Stenotrophomonas maltophilia Ab55555	2009	Open in IMG/M
3300026067\|Ga0207678_10393098	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1200	Open in IMG/M
3300026067\|Ga0207678_10427606	Not Available	1149	Open in IMG/M
3300026116\|Ga0207674_10393154	All Organisms → Viruses → Predicted Viral	1340	Open in IMG/M
3300026116\|Ga0207674_10440340	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1259	Open in IMG/M
3300026116\|Ga0207674_10487061	All Organisms → cellular organisms → Bacteria	1192	Open in IMG/M
3300026142\|Ga0207698_11734925	Not Available	640	Open in IMG/M

Habitat	Taxonomy	Distribution
Host-Associated	Host-Associated	73.44%
Environmental	Environmental	26.56%

Habitat	Taxonomy	Distribution
Plants	Host-Associated → Plants	73.44%
Terrestrial	Environmental → Terrestrial	26.56%

Habitat	Taxonomy	Distribution
Rhizosphere	Host-Associated → Plants → Rhizosphere	54.69%
Soil	Environmental → Terrestrial → Soil	26.56%
Rhizoplane	Host-Associated → Plants → Rhizoplane	18.75%

Habitat	Taxonomy	Distribution
Soil	Host-Associated → Plants → Rhizosphere → Soil	37.50%
Loam	Environmental → Terrestrial → Soil → Loam	23.44%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	18.75%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	17.19%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	3.12%

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	37.50%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	23.44%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	18.75%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	17.19%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	2.34%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.78%

Habitat	Taxonomy	Distribution
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	37.50%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	23.44%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	18.75%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	10.94%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	6.25%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	2.34%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.78%

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001915	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C7	Host-Associated	Open in IMG/M
3300005327	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG	Host-Associated	Open in IMG/M
3300005329	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG	Environmental	Open in IMG/M
3300005336	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG	Environmental	Open in IMG/M
3300005337	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG	Environmental	Open in IMG/M
3300005339	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG	Host-Associated	Open in IMG/M
3300005344	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG	Host-Associated	Open in IMG/M
3300005366	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG	Host-Associated	Open in IMG/M
3300005455	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG	Host-Associated	Open in IMG/M
3300005458	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG	Environmental	Open in IMG/M
3300005530	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG	Environmental	Open in IMG/M
3300005535	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG	Environmental	Open in IMG/M
3300005539	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2	Host-Associated	Open in IMG/M
3300005563	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2	Host-Associated	Open in IMG/M
3300005577	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2	Host-Associated	Open in IMG/M
3300005578	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2	Host-Associated	Open in IMG/M
3300005616	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2	Host-Associated	Open in IMG/M
3300005834	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2	Host-Associated	Open in IMG/M
3300006804	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200	Environmental	Open in IMG/M
3300009093	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG	Host-Associated	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300013100	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG	Host-Associated	Open in IMG/M
3300013102	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG	Host-Associated	Open in IMG/M
3300013104	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG	Host-Associated	Open in IMG/M
3300013105	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG	Host-Associated	Open in IMG/M
3300013307	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG	Host-Associated	Open in IMG/M
3300025909	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025912	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025913	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025917	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025919	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025920	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025921	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025932	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025945	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025949	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026041	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026067	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026116	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026142	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes)	Host-Associated	Open in IMG/M

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI24741J21665_10311761	3300001915	Corn Rhizosphere	MNPAEADLVRHELASLTRRAEAAESSRDQYKRERDEARAILARIKSSLAEGFND
Ga0070658_1000733216	3300005327	Corn Rhizosphere	MNADEAALVRHQIEAAEHRAEAAEAAQRRAEGERDALRALLARVRTSLNEAHNDPACDGVPTRSES*
Ga0070658_100597172	3300005327	Corn Rhizosphere	MNPAEADLVRHELASLTRRAEAAESSRDQYKRERDEARAILARIKSSLAEGFNDPGHDGQPRDAE*
Ga0070658_100628925	3300005327	Corn Rhizosphere	MNADEADLVRHELASLTRRAEAAESSRDQYKRERDQARAILARVRTSMNEAHNDPATDGRPEGVQS*
Ga0070658_100653087	3300005327	Corn Rhizosphere	GAGSMNADEAALVRHQIEAAEHRADAAEAAQRRAEGERDALRALLARVRTSLNEAVNDPVSDGRPVGSEP*
Ga0070658_101167132	3300005327	Corn Rhizosphere	MNPAEADLVRHELASLTRRAEQAESSRDQYKRERDEARAILARVRTSLNEAHNDPADDGRPTGSEP*
Ga0070658_101216092	3300005327	Corn Rhizosphere	MNAAEADLVRAEIESLTRRAEQAESSRDQYKRERDEARAILARVRTSLNEAHNDPASDGRPTGSES*
Ga0070658_101446523	3300005327	Corn Rhizosphere	MNADEAALVRHQIEAAEHRAKAAESLRDQYKRERDAARAILARVRTSLGEVHNDPADDGKPRGAE*
Ga0070658_103660391	3300005327	Corn Rhizosphere	MNPAEADLVRHELASLTRRAEAAESLRDQFKRERDEARAILARVRTSLGEVHNDPATDGRPVGALSNE*
Ga0070658_106214342	3300005327	Corn Rhizosphere	MNADEAALVRHQIEAAEHRAKAAEAAQRRAEGERDRLRALLARLRTSLAEAFNDPADSGRP*
Ga0070658_115693492	3300005327	Corn Rhizosphere	MNPAEADLVRHELASLTRRAEQAESARDQYKRERDQARAILARVRTSLGEVHNDPATDGRPVGALSNE*
Ga0070683_1000373066	3300005329	Corn Rhizosphere	MNAAEADLVRAEIESLTRRAEQAESSRDQYKRERDEARAILARIKSSLAEGFNDPGHDGQPRDAE*
Ga0070683_1001395853	3300005329	Corn Rhizosphere	MNPAEADLVRHELASLTRRAEAAESSRDQYKRERDEARAILARVRTSLGEVHNDPATDGRPVGALSNE*
Ga0070683_1020365762	3300005329	Corn Rhizosphere	MNADEAALVRHQIEAAEHRAEAAEAERDQYKRERDEARAILARIKSSLAEGFNDPGHDGQPRGIE*
Ga0070680_1000493082	3300005336	Corn Rhizosphere	MNADEAALVRHQIEAAEHRADAAEAAQRRAEGERDALRALLARVRTSLNEAVNDPADDGKPRGAE*
Ga0070680_1001112051	3300005336	Corn Rhizosphere	MNADEADLVRHELASLTRRAEAAESSRDQYKRERDEARAILARIKSSLAEGFNDPGHDGQPRDA
Ga0070680_1001364511	3300005336	Corn Rhizosphere	MNPAEADLVRHELASLTRRAEQAESSRDQYKRERDEARAILARIKSSLAEGFNDPGHDGQPRDAE*
Ga0070680_1003649092	3300005336	Corn Rhizosphere	MTNDEAELVRCQIEAAERRAQAAGRDRDQYKRERDEARAILARIKSSLAEGFNDPGHDGQPRGIE*
Ga0070680_1004691663	3300005336	Corn Rhizosphere	MNPAEADLVRHELASLTRRAEAAESLRDQYKRERDEARAILARVRTSLGEVHNDPASDGRPAGSEP*
Ga0070680_1009833811	3300005336	Corn Rhizosphere	MNPAEADLVRHELASLTRRAEQAESSRDQYKRERDEARAILARVRTSLGEVHNDPADDGKPRGAE*
Ga0070680_1015319991	3300005336	Corn Rhizosphere	MNPAEADLVRHELASLTRRAEAAESLRDQYKRERDEARAILARVRTSLNEAHNDPADDGRPTGSEP*
Ga0070680_1017326801	3300005336	Corn Rhizosphere	MNPAEADLVRHELASLTRRAEAAESARDQYKRERDEARAILARVRTSLNEAHNDPADDGRPTGSEP*AHHA
Ga0070682_1013095423	3300005337	Corn Rhizosphere	MNADEADLVRHELASLTRRAEAAESSRDQYKRERDEARAILARIKSSLAEGFNDPGHDGQPR
Ga0070682_1019883172	3300005337	Corn Rhizosphere	MNPAEADLVRHELASLTRRAEQAESSRDQYKRERDQARAILARVRTSLGEVHNDPATDGRPVGALSNE*
Ga0070660_1000600863	3300005339	Corn Rhizosphere	MNPAEADLVRHELASLTRRAEAAESSRDQYKRERDEARAILARVRTSLNEAHNDPADDGRPTGSEP*
Ga0070660_1002049692	3300005339	Corn Rhizosphere	MNADEADLVRHELASLTRRAEAAESSRDQYKRERDEARAILARIKSSLAEGFNDPGHDGQPRDAE*
Ga0070660_1002096963	3300005339	Corn Rhizosphere	ADEADLVRHELASLTRRAEAAESSRDQYKRERDQARAILARVRTSMNEAHNDPATDGRPEGVQS*
Ga0070660_1003407961	3300005339	Corn Rhizosphere	MNADEAALVRHQIEAAEHRAEAAEAERDQYKRERDEARAILARIKSSLAEGFNDPGHDGQPRG
Ga0070660_1004324162	3300005339	Corn Rhizosphere	VNPAEADLVRHELASLTRRAEAAESSRDQYKRERDEARAILARVRTSLGEVHNDPASDGRPVGSEP*
Ga0070660_1007648443	3300005339	Corn Rhizosphere	MNPAEADLVRHELASLTRRAEQAESSLREVARERDHLRALLTRLRTSLNEIQNDPVSDGRPVGALSNE*
Ga0070661_1000617694	3300005344	Corn Rhizosphere	GRRMNAAEADLVRAEIESLTRRAEQAESSRDQYKRERDEARAILARIKSSLAEGFNDPGHDGQPRDAE*
Ga0070661_1003395261	3300005344	Corn Rhizosphere	GRRMNAAEADLVRAEIESLTRRAEQAESSRDQYKRERDEARAILARVRTSLNEAHNDPASDGRPTGSES*
Ga0070661_1009612821	3300005344	Corn Rhizosphere	MNADEAALVRHQIEAAERRAQAAERDRDQYKRERDEARAILARVRTSLNEAHNDPADDGKPRGAE*
Ga0070659_1014471162	3300005366	Corn Rhizosphere	MNADEAALVRHQIEAAEHRAEAAEAERDQFKRERDQARAILARVRTSMNEAHNDPATDGRPEGVQS*
Ga0070659_1015609771	3300005366	Corn Rhizosphere	AALVRHQIEAAEHRADAAEAAQRRAEGERDALRALLARVRTSLNEAVNDPVSDGRPVGSEP*
Ga0070663_1000655558	3300005455	Corn Rhizosphere	MNADEADLVRHELASLTRRAEAAESSRDQYKRERDEARAILARIKSSLAEGFNDPGHDGQ
Ga0070663_1004479581	3300005455	Corn Rhizosphere	ADLVRAEIESLTRRAEQAESSRDQYKRERDEARAILARVRTSLNEAHNDPASDGRPTGSES*
Ga0070663_1019082961	3300005455	Corn Rhizosphere	LASLTRRAEQAESARDQYKRERDQARAILARVRTSLGEVHNDPATDGRPVGALSNE*
Ga0070681_100350632	3300005458	Corn Rhizosphere	MNAAEADLVRCELESLTRRAEAAESSLRAIARERDQLRAILTRIRTSLNENANDPGSDGVPDREEP*
Ga0070681_104482392	3300005458	Corn Rhizosphere	MTNDEAELVRCQIEAAERRAQAAGRDRDQYKRERDEARAILARIKSSLAEGFNDPGHDGQPR
Ga0070681_118828841	3300005458	Corn Rhizosphere	QIEAAERRAQAAERDRDQYKRERDEARAILARVRTSLGEVHNDPATDGRPTGSEP*
Ga0070679_1011776352	3300005530	Corn Rhizosphere	MNADEAALVRHQIEAAERRAQAAERDRDQYKRERDEARAILARVRTSLGEVHNDPATDGRPTGSEP*
Ga0070684_1009800931	3300005535	Corn Rhizosphere	NDTEANLVRAEIESLTRRAEAAESSRDQYKRERDQARAILARVRTSLGEVHNDPATDGRPVGALSNE*
Ga0068853_1003140772	3300005539	Corn Rhizosphere	MNPAEADLVRHELASLTRRAEAAESSRDQYKRERDEARAILARVRTSLGEVHNDPATDGRPTGSEP*
Ga0068855_1004537111	3300005563	Corn Rhizosphere	MTNDEAELVRCQIEAAERRAQAAGRDRDQYKRERDEARAILARIKSSLAEGFNDPGHD
Ga0068855_1012249492	3300005563	Corn Rhizosphere	MTNDEAELVRCQIEAAERRAQAAERDRDQYKRERDEARAILARVRTSLNEAHNDPADDGKPRGAE*
Ga0068857_1000698347	3300005577	Corn Rhizosphere	MNAAEADLVRAEIESLTRRAEQAESSRDQYKRERDEARAILARIKSSLAEGFNDPGHDGQPR
Ga0068857_1000926564	3300005577	Corn Rhizosphere	MNADEAALVRHQIEAAEHRADAAEAAQRRAEGERDALRALLARVRTSLNEAHNDPACDGVPTRSES*
Ga0068857_1002508364	3300005577	Corn Rhizosphere	VNPAEADLVRHELASLTRRAEQAESSLREVARERDHLRALLTRLRTSLNEIQNDPVSDGRPVGALSNE*
Ga0068857_1003899382	3300005577	Corn Rhizosphere	MNDTEASLVRAEIESLTRRAVAAESSRDQYKRERDEARAILARVRTSLNEAHNDPASDGRPTGSES*
Ga0068854_1010322333	3300005578	Corn Rhizosphere	AEADLVRHELASLTRRAEAAESSRDQYKRERDEARAILARVRTSLGEVHNDPATDGRPVGALSNE*
Ga0068854_1020679181	3300005578	Corn Rhizosphere	AEADLVRHELASLTRRAEAAESSRDQYKRERDEARAILARIKSSLAEGFNDPGHDGQPRDAE*
Ga0068852_1002048243	3300005616	Corn Rhizosphere	MNPAEADLVRHELASLTRRAEAAESSRDQYKRERDQARAILARVRTSMNEAHNDPASDGRPVGSEP*
Ga0068852_1005171362	3300005616	Corn Rhizosphere	MNADEAALVRHQIEAAEHRAKAAESLRDQYKRERDAARAILAHVRTSLGEVHNDPADDGKPRGAE*
Ga0068851_108705061	3300005834	Corn Rhizosphere	MNADEAALVRHQIEAAEHRAKAAESLRDQYKRERDAARAILARVRTSLGEVHNDPGSDGR
Ga0079221_100269834	3300006804	Agricultural Soil	MTNDEAELVRLQIGSVTRRAETAERERDQYKRERDEVRAILARVRTSMNEARNDPAEDGRPPGGVS*
Ga0105240_101020684	3300009093	Corn Rhizosphere	VNDTEANLVRAEIESLTRRAEQAESSRDRYKRERDEARAILARVRTSMNEAHNDPASDGRPVGSEP*
Ga0105240_101315443	3300009093	Corn Rhizosphere	MNPAEADLVRHELASLTRRAEAAESLRDQYKRERDAARAILARVRTSLNEAHNDPGSDGRPAGSES*
Ga0105240_104926813	3300009093	Corn Rhizosphere	MNAAEADLVRAEIESLTRRAEQAESSRDQYKRERDEARAILARVRTSLGEVHNDPATDGR
Ga0105240_112465562	3300009093	Corn Rhizosphere	ELASLTRRAEAAESSRDQYKRERDEARAILARVRTSLNEAHNDPADDGRPTGSEP*
Ga0105240_127841002	3300009093	Corn Rhizosphere	MNTDEAALVRHQIEAAEHRAKAAEAERDQCKRERDEARAILARIKSSLAEGFNDPGHDGQPRGSE*
Ga0134125_122702881	3300010371	Terrestrial Soil	IEAAEQRAKAAESLRDQYKRERDQARAILARVRTSLNEAHNDPASDGRPTGSES*
Ga0134128_127797032	3300010373	Terrestrial Soil	MNADEAALVRHQIEAAEQRAKAAESLRDQYKRERDQARAILARVRTSMNEAHNDPADDGKPRGAE*
Ga0134126_102957364	3300010396	Terrestrial Soil	MNATEAALVRHQIEAAEHRAEAAEAAQRRAEGERDALRALLARVRTSLNEAHNDPADDGRPTGSEP*
Ga0157373_104487932	3300013100	Corn Rhizosphere	RMNAAEADLVRAEIESLTRRAEQAESSRDQYKRERDEARAILARVRTSLNEAHNDPASDGRPTGSES*
Ga0157371_101187104	3300013102	Corn Rhizosphere	PAEADLVRHELASLTRRAEAAESSRDQYKRERDEARAILARVRTSLNEAHNDPADDGRPTGSEP*
Ga0157371_102411024	3300013102	Corn Rhizosphere	MNADEAALVRHQIEAAEHRADAAEAAQRRAEGERDALRALLARVRTSLNEAVNDPVSDGRPVGSEP*
Ga0157371_105771012	3300013102	Corn Rhizosphere	MNADEAALVRHQIEAAERRAQAAERDRDQYNRERDEARAILACVRTSLNEAHNDPADDGKPRGAE*
Ga0157370_100495214	3300013104	Corn Rhizosphere	MNPAEADLVRHELESLTRRAEAAESSRDQYKRERDEARAILARVRTSMNEAHNDPTSDGRPVGS*
Ga0157370_100737411	3300013104	Corn Rhizosphere	MTNDEAELVRCQIEAAERRAQAAECDRDQYKRERDEARAILARIKSSLAEGFNDPGHDGQPRDAE*
Ga0157370_102391903	3300013104	Corn Rhizosphere	MNPAEADLVRHELASLTRRAEAAESLRDQYKRERDAARAILARVRTSLNEAHNDPGSGGRPEGVQS*
Ga0157370_108263922	3300013104	Corn Rhizosphere	MNPAEADLVRHELASLTRRAEQAESSRDQYKRERDAARAILAHVRTSLGEVHNDPGSDGRPAGSES*
Ga0157369_101288761	3300013105	Corn Rhizosphere	GGRRMNAAEADLVRAEIESLTRRAEQAESSRDQYKRERDEARAILARIKSSLAEGFNDPGHDGQPRDAE*
Ga0157369_103854324	3300013105	Corn Rhizosphere	GGRRMNAAEADLVRAEIESLTRRAEQAESSRDQYKRERDEARAILARVRTSLNEAHNDPASDGRPTGSES*
Ga0157372_107902672	3300013307	Corn Rhizosphere	MNPAEADLVRHELASLTRRAEQAESSRDQYKRERDEARAILARVRTSLGEVHNDPASDGRPVGSEP*
Ga0157372_114622811	3300013307	Corn Rhizosphere	MNADEAALVRHQIEAAEHRAKAAEAAQGRAEGERDRLRALLARLRTSLAEA
Ga0157372_115452311	3300013307	Corn Rhizosphere	MNADEAALVRHQIEAAEHRAKAAEAERDQCKRERDEARAILARIKSSLAEGFNDPGHDGQPRGSE*
Ga0157372_125130502	3300013307	Corn Rhizosphere	YRWGRAMNADEAALVRHQIEAAERREQAAERERAQYKRERDEARAILACVRTSLNEAHNDPADDGKPRGAE*
Ga0207705_100068333	3300025909	Corn Rhizosphere	MNADEAALVRHQIEAAEHRAEAAEAAQRRAEGERDALRALLARVRTSLNEAHNDPACDGVPTRSES
Ga0207705_100101165	3300025909	Corn Rhizosphere	MNADEAALVRHQIEAAEHRAEAAEAERDQYKRERDEARAILARIKSSLAEGFNDPGHDGQPRGIE
Ga0207705_100186698	3300025909	Corn Rhizosphere	MNADEAALVRHQIEAAEHRADAAEAAQRRAEGERDALRALLARVRTSLNEAVNDPVSDGRPVGSEP
Ga0207705_100478563	3300025909	Corn Rhizosphere	MNADEAALVRHQIEAAEHRAKAAESLRDQYKRERDAARAILARVRTSLGEVHNDPADDGKPRGAE
Ga0207705_100502797	3300025909	Corn Rhizosphere	MNAAEADLVRAEIESLTRRAEQAESSRDQYKRERDEARAILARIKSSLAEGFNDPGHDG
Ga0207705_100504425	3300025909	Corn Rhizosphere	MNPAEADLVRHELASLTRRAEAAESSRDQYKRERDEARAILARIKSSLAEGFNDPGHDGQPRDAE
Ga0207705_100507116	3300025909	Corn Rhizosphere	MNADEADLVRHELASLTRRAEAAESSRDQYKRERDQARAILARVRTSMNEAHNDPATDGRPEGVQS
Ga0207705_100925992	3300025909	Corn Rhizosphere	MNPAEADLVRHELASLTRRAEAAESSRDQYKRERDEARAILARVRTSLNEAHNDPADDGRPTGSEP
Ga0207705_102151123	3300025909	Corn Rhizosphere	MNPAEADLVRHELASLTRRAEQAESSLREVARERDHLRALLTRLRTSLNEIQNDPVSDGRPVGALSNE
Ga0207705_102428572	3300025909	Corn Rhizosphere	MNPAEADLVRHELASLTRRAEAAESLRDQFKRERDEARAILARVRTSLGEVHNDPATDGRPVGALSNE
Ga0207705_109997512	3300025909	Corn Rhizosphere	MNADEAALVRHQIEAAEQRAKAAESLRDQYKRERDQARAILARVRTSLNEAHNDPASDGRPTGSES
Ga0207707_100170557	3300025912	Corn Rhizosphere	MNADEADLVRHELASLTRRAEAAESSRDQYKRERDEARAILARIKSSLAEGFNDPGHDGQPRDAE
Ga0207707_100200836	3300025912	Corn Rhizosphere	MNAAEADLVRAEIESLTRRAEQAESSRDQYKRERDEARAILARVRTSLNEAHNDPASDGRPTGSES
Ga0207707_100493797	3300025912	Corn Rhizosphere	MNADEAALVRHQIEAAEHRADAAEAAQRRAEGERDALRALLARVRTSLNEAVNDPADDGKPRGAE
Ga0207707_100544544	3300025912	Corn Rhizosphere	MTNDEAELVRCQIEAAERRAQAAGRDRDQYKRERDEARAILARIKSSLAEGFNDPGHDGQPRGIE
Ga0207707_101020827	3300025912	Corn Rhizosphere	MNADEAALVRHQIEAAEHRAEAAEAERDQYKRERDEARAILARIKSSLAEGFNDPGHDG
Ga0207707_102796402	3300025912	Corn Rhizosphere	MNAAEADLVRCELESLTRRAEAAESSLRAIARERDQLRAILTRIRTSLNENANDPGSDGVPDREEP
Ga0207707_103322762	3300025912	Corn Rhizosphere	MNPAEADLVRHELASLTRRAEQAESSRDQYKRERDEARAILARVRTSLGEVHNDPADDGKPRGAE
Ga0207695_101685113	3300025913	Corn Rhizosphere	MNAAEADLVRAEIESLTRRAEQAESSRDQYKRERDEARAILARVRTSLNEAHNDPADDGRPTGSEP
Ga0207695_102449744	3300025913	Corn Rhizosphere	VNDTEANLVRAEIESLTRRAEQAESSRDRYKRERDEARAILARVRTSMNEAHNDPASDGRPVGSEP
Ga0207695_105422002	3300025913	Corn Rhizosphere	MNPAEADLVRHELASLTRRAEAAESLRDQYKRERDAARAILARVRTSLNEAHNDPGSDGRPAGSES
Ga0207660_102007901	3300025917	Corn Rhizosphere	MNDTEANLVRAEIESLTRRAEAAESSRDQYKRERDQARAILARVRTSLGEVHNDPATDGRPVGALSNE
Ga0207660_105026673	3300025917	Corn Rhizosphere	MNPAEADLVRHELASLTRRAEAAESLRDQYKRERDEARAILARVRTSLGEVHNDPASDGRPAGSEP
Ga0207657_101816872	3300025919	Corn Rhizosphere	VNPAEADLVRHELASLTRRAEAAESSRDQYKRERDEARAILARVRTSLGEVHNDPASDGRPVGSEP
Ga0207657_102096504	3300025919	Corn Rhizosphere	MNDTEANLVRAEIESLTRRAEAAESLRDQYKRERDAARAILARVRTSLNEAHNDPASDGRPTGSES
Ga0207657_102109321	3300025919	Corn Rhizosphere	ADEADLVRHELASLTRRAEAAESSRDQYKRERDQARAILARVRTSMNEAHNDPATDGRPEGVQS
Ga0207649_103761104	3300025920	Corn Rhizosphere	MNADEAALVRHQIEAAERRAQAAERDRDQYKRERDEARAILARVRTSLNEAHNDPADDGKPRG
Ga0207649_108405721	3300025920	Corn Rhizosphere	MNAAEADLVRAEIESLTRRAEQAESSRDQYKRERDEARAILARIKSSLAEGFNDP
Ga0207649_111377353	3300025920	Corn Rhizosphere	MNPAEADLVRHELASLTRRAEAAESSRDQFKRERDQARAILARVRTSMNEAHNDPASD
Ga0207652_100152407	3300025921	Corn Rhizosphere	MNPAEADLVRHELASLTRRAEAAESSRDQYKRERDQARAILARVRTSLGEVHNDPATDGRPVGALSNE
Ga0207652_100703737	3300025921	Corn Rhizosphere	MNAAEADLVRAEIESLTRRAEQAESSRDQYKRERDEARAILARIKSSLAEGFNDPGHDGQ
Ga0207652_106197542	3300025921	Corn Rhizosphere	MNPAEADLVRHELASLTRRAEAAESLRDQYKRERDEARAILARVRTSLNEAHNDPADDGRPTGSEP
Ga0207690_100619631	3300025932	Corn Rhizosphere	MNAAEADLVRAEIESLTRRAEQAESSRDQYKRERDEARAILARIKSSLAEGFNDPGHDGQPRDAE
Ga0207690_112674722	3300025932	Corn Rhizosphere	DAADLMRHELASLTRRAEAAESSRDQYKRERDQARAILARVRTSMNEAHNDPATDGRPEGVQS
Ga0207679_116918132	3300025945	Corn Rhizosphere	EADLVRHELASLTRRAEAAESSRDQYKRERDEARAILARVRTSLNEAHNDPADDGKPRGA
Ga0207667_100433892	3300025949	Corn Rhizosphere	VNADEAALVRHQIEAAEHRAKAAEAAQRRAEGERDRLRALLARLRTSLAEAFNDPADSGR
Ga0207667_100718836	3300025949	Corn Rhizosphere	GRRMNAAEADLVRAEIESLTRRAEQAESSRDQYKRERDEARAILARIKSSLAEGFNDPGHDGQPRDAE
Ga0207667_102750442	3300025949	Corn Rhizosphere	VNADEAALVRRQIEAAERRAEAAEAAQKRAEGERDALRALLARVRTSLNEAHNDPASDGRPALINP
Ga0207667_102751714	3300025949	Corn Rhizosphere	MNADEAALVRHQIEAAEHRAEAAEAERDQFKRERDQARAILARVRTSMNEAHNDPASDGRPVGSEP
Ga0207667_103285843	3300025949	Corn Rhizosphere	ADLVRHELASLTRRAEQAESSRDQYKRERDEARAILARVRTSMNEAHNDPADDGKPRGAE
Ga0207667_116838143	3300025949	Corn Rhizosphere	MTNDEAELVRCQIEAAERRAQAAERDRDQYKRERDEARAILARIKSSLAEGFNDPGHD
Ga0207639_102035715	3300026041	Corn Rhizosphere	MNPAEADLVRHELASLTRRAEAAECSRDQFKRERDQARAILARVRTSLGEVHNDPATDGRPVGALSNE
Ga0207678_101011376	3300026067	Corn Rhizosphere	EAALVRHQIEAAEHRADAAEAAQRRAEGERDALRALLARVRTSLNEAVNDPVSDGRPVGSEP
Ga0207678_101473321	3300026067	Corn Rhizosphere	MNADEADLVRHELASLTRRAEAAESSRDQYKRERDEARAILARIKSSLAEGFNDPGHDG
Ga0207678_103930983	3300026067	Corn Rhizosphere	ADLVRAEIESLTRRAEQAESSRDQYKRERDEARAILARVRTSLNEAHNDPASDGRPTGSE
Ga0207678_104276063	3300026067	Corn Rhizosphere	EAALVRHQIEAAEHRADAAEAAQRRAEGERDALRALLARVRTSLNEAHNDPACDGVPTRSES
Ga0207674_103931544	3300026116	Corn Rhizosphere	MNADEAALVRHQIEAAEHRADAAEAAQRRAEGERDALRALLARVRTSLNEAHNDPACDGVPTRSES
Ga0207674_104403403	3300026116	Corn Rhizosphere	DLVRAEIESLTRRAEQAESSRDQYKRERDEARAILARVRTSLNEAHNDPASDGRPTGSES
Ga0207674_104870611	3300026116	Corn Rhizosphere	MTNDEAELVRCQIEAAERRAQAAGRDRDQYKRERDEARAILARIKSSLAEGFNDPGHDG
Ga0207698_117349251	3300026142	Corn Rhizosphere	MNPAEADLVRHELASLTRRAEQAESSRDQYKRERDEARAILARVRTSLNEAHNDPADDGRPTGSEP

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.53
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.53
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F064503

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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Geographical Distribution

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