Metagenome / Metatranscriptome Family F064396

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F064396
Family Type	Metagenome / Metatranscriptome
Number of Sequences	128
Average Sequence Length	59 residues
Representative Sequence	MEKTMENQWAGFDDFELACLCHGYGIEEECVFEGILPVKLANRAQIEALLTEFEFELAFGE
Number of Associated Samples	99
Number of Associated Scaffolds	128

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Viruses
% of genes with valid RBS motifs	35.16 %
% of genes near scaffold ends (potentially truncated)	18.75 %
% of genes from short scaffolds (< 2000 bps)	60.16 %
Associated GOLD sequencing projects	86
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.74

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Predicted Viral (46.875 % of family members)
NCBI Taxonomy ID	10239 (predicted)
Taxonomy	All Organisms → Viruses → Predicted Viral

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake (22.656 % of family members)
Environment Ontology (ENVO)	Unclassified (64.844 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Water (non-saline) (75.000 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 33.71% β-sheet: 7.87% Coil/Unstructured: 58.43%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.74
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.74
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SCOP family	SCOP domain	Representative PDB	TM-score
a.24.9.1: alpha-catenin/vinculin	d1st6a5	1st6	0.66134
a.140.1.1: LEM domain	d7ndyg_	7ndy	0.65003
a.140.3.2: YqbF C-terminal domain-like	d2hjqa1	2hjq	0.62142
a.140.5.1: DNA-binding domain of EIN3-like	d4zdsa1	4zds	0.61888
a.262.1.1: PriB N-terminal domain-like	d1zt2b1	1zt2	0.61599

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 128 Family Scaffolds
PF13759	2OG-FeII_Oxy_5	7.03
PF02463	SMC_N	6.25
PF13640	2OG-FeII_Oxy_3	5.47
PF00004	AAA	3.12
PF08406	CbbQ_C	3.12
PF00149	Metallophos	2.34
PF07728	AAA_5	2.34
PF14090	HTH_39	0.78
PF11649	T4_neck-protein	0.78
PF04851	ResIII	0.78
PF00210	Ferritin	0.78
PF13555	AAA_29	0.78
PF11056	UvsY	0.78
PF04542	Sigma70_r2	0.78
PF04423	Rad50_zn_hook	0.78

COG ID	Name	Functional Category	% Frequency in 128 Family Scaffolds
COG0714	MoxR-like ATPase	General function prediction only [R]	3.12
COG0419	DNA repair exonuclease SbcCD ATPase subunit	Replication, recombination and repair [L]	0.78
COG0568	DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32)	Transcription [K]	0.78
COG1191	DNA-directed RNA polymerase specialized sigma subunit	Transcription [K]	0.78
COG1595	DNA-directed RNA polymerase specialized sigma subunit, sigma24 family	Transcription [K]	0.78
COG4941	Predicted RNA polymerase sigma factor, contains C-terminal TPR domain	Transcription [K]	0.78

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	88.28 %
Unclassified	root	N/A	11.72 %

Name	Rank	Taxonomy	Distribution
Viruses	superkingdom	All Organisms → Viruses	88.28 %
Unclassified	root	N/A	11.72 %

Name	Rank	Taxonomy	Distribution
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	46.88 %
Duplodnaviria	clade	All Organisms → Viruses → Duplodnaviria	35.94 %
Unclassified	root	N/A	11.72 %

Name	Rank	Taxonomy	Distribution
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	46.88 %
Heunggongvirae	kingdom	All Organisms → Viruses → Duplodnaviria → Heunggongvirae	35.94 %
Unclassified	root	N/A	11.72 %

Name	Rank	Taxonomy	Distribution
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	46.88 %
Uroviricota	phylum	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota	35.94 %
Unclassified	root	N/A	11.72 %

Name	Rank	Taxonomy	Distribution
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	46.88 %
Caudoviricetes	class	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	35.94 %
Unclassified	root	N/A	11.72 %

Name	Rank	Taxonomy	Distribution
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	46.88 %
environmental samples	no rank	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples	21.88 %
Caudovirales	order	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales	13.28 %
Unclassified	root	N/A	11.72 %

Name	Rank	Taxonomy	Distribution
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	46.88 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	21.88 %
Myoviridae	family	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae	13.28 %
Unclassified	root	N/A	11.72 %

Name	Rank	Taxonomy	Distribution
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	46.88 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	21.88 %
Unclassified	root	N/A	11.72 %
unclassified Myoviridae	no rank	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae → unclassified Myoviridae	0.78 %

Name	Rank	Taxonomy	Distribution
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	46.88 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	21.88 %
Unclassified	root	N/A	11.72 %
Pelagibacter phage HTVC008M	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae → unclassified Myoviridae → Pelagibacter phage HTVC008M	0.78 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001847\|RCM41_1016686	All Organisms → Viruses → Predicted Viral	1584	Open in IMG/M
3300002161\|JGI24766J26685_10068694	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae	774	Open in IMG/M
3300002408\|B570J29032_109238201	Not Available	649	Open in IMG/M
3300002408\|B570J29032_109916803	All Organisms → Viruses → Predicted Viral	2556	Open in IMG/M
3300002835\|B570J40625_100174882	All Organisms → Viruses → Predicted Viral	2385	Open in IMG/M
3300003277\|JGI25908J49247_10135979	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	577	Open in IMG/M
3300003388\|JGI25910J50241_10026037	All Organisms → Viruses → Predicted Viral	2016	Open in IMG/M
3300003388\|JGI25910J50241_10038103	All Organisms → Viruses → Predicted Viral	1575	Open in IMG/M
3300003388\|JGI25910J50241_10071372	All Organisms → Viruses → Predicted Viral	1014	Open in IMG/M
3300003393\|JGI25909J50240_1006234	All Organisms → Viruses → Predicted Viral	2994	Open in IMG/M
3300003394\|JGI25907J50239_1035092	All Organisms → Viruses → Predicted Viral	1060	Open in IMG/M
3300003411\|JGI25911J50253_10057699	All Organisms → Viruses → Predicted Viral	1300	Open in IMG/M
3300003430\|JGI25921J50272_10010928	All Organisms → Viruses → Predicted Viral	2672	Open in IMG/M
3300004763\|Ga0007746_1068939	All Organisms → Viruses → Predicted Viral	4325	Open in IMG/M
3300004788\|Ga0007742_11052793	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	808	Open in IMG/M
3300004795\|Ga0007756_10160343	All Organisms → Viruses → Predicted Viral	3988	Open in IMG/M
3300005527\|Ga0068876_10172282	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1265	Open in IMG/M
3300005527\|Ga0068876_10476859	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	688	Open in IMG/M
3300005580\|Ga0049083_10213414	Not Available	654	Open in IMG/M
3300005581\|Ga0049081_10007396	All Organisms → Viruses → Predicted Viral	4148	Open in IMG/M
3300005582\|Ga0049080_10092066	All Organisms → Viruses → Predicted Viral	1033	Open in IMG/M
3300005582\|Ga0049080_10302601	Not Available	515	Open in IMG/M
3300005662\|Ga0078894_10101238	All Organisms → Viruses → Predicted Viral	2544	Open in IMG/M
3300005662\|Ga0078894_10974313	Not Available	731	Open in IMG/M
3300007973\|Ga0105746_1058246	All Organisms → Viruses → Predicted Viral	1223	Open in IMG/M
3300008055\|Ga0108970_11543081	All Organisms → Viruses → Predicted Viral	2911	Open in IMG/M
3300008107\|Ga0114340_1002132	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	16900	Open in IMG/M
3300008107\|Ga0114340_1013003	All Organisms → Viruses → Predicted Viral	4064	Open in IMG/M
3300008113\|Ga0114346_1010115	All Organisms → Viruses	5423	Open in IMG/M
3300008113\|Ga0114346_1223659	All Organisms → Viruses → Predicted Viral	1187	Open in IMG/M
3300008113\|Ga0114346_1277752	Not Available	597	Open in IMG/M
3300008119\|Ga0114354_1016748	All Organisms → Viruses → Predicted Viral	3337	Open in IMG/M
3300008258\|Ga0114840_1030988	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae	874	Open in IMG/M
3300008996\|Ga0102831_1215753	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	634	Open in IMG/M
3300009068\|Ga0114973_10001682	All Organisms → Viruses	16295	Open in IMG/M
3300009151\|Ga0114962_10011112	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae	6625	Open in IMG/M
3300009151\|Ga0114962_10021814	All Organisms → Viruses → Predicted Viral	4513	Open in IMG/M
3300009154\|Ga0114963_10011940	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae	5875	Open in IMG/M
3300009155\|Ga0114968_10119335	All Organisms → Viruses → Predicted Viral	1593	Open in IMG/M
3300009155\|Ga0114968_10236803	All Organisms → Viruses → Predicted Viral	1043	Open in IMG/M
3300009159\|Ga0114978_10103244	All Organisms → Viruses → Predicted Viral	1881	Open in IMG/M
3300009164\|Ga0114975_10081845	All Organisms → Viruses → Predicted Viral	1878	Open in IMG/M
3300009183\|Ga0114974_10199833	All Organisms → Viruses → Predicted Viral	1221	Open in IMG/M
3300009183\|Ga0114974_10291027	Not Available	964	Open in IMG/M
3300009183\|Ga0114974_10562366	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	633	Open in IMG/M
3300009218\|Ga0103848_1000771	All Organisms → Viruses → Predicted Viral	4551	Open in IMG/M
3300009223\|Ga0103850_1037472	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	582	Open in IMG/M
3300009243\|Ga0103860_10066096	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	740	Open in IMG/M
3300009419\|Ga0114982_1078661	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae	1025	Open in IMG/M
3300010334\|Ga0136644_10773447	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	518	Open in IMG/M
3300010965\|Ga0138308_127786	All Organisms → Viruses → Predicted Viral	2644	Open in IMG/M
3300011010\|Ga0139557_1032719	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	916	Open in IMG/M
3300011268\|Ga0151620_1001210	All Organisms → Viruses	9933	Open in IMG/M
3300011995\|Ga0153800_1025467	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	614	Open in IMG/M
3300012012\|Ga0153799_1003318	All Organisms → Viruses → Predicted Viral	4187	Open in IMG/M
3300012352\|Ga0157138_1002665	All Organisms → Viruses → Predicted Viral	3073	Open in IMG/M
3300012781\|Ga0138286_1294476	All Organisms → Viruses → Predicted Viral	1490	Open in IMG/M
3300013004\|Ga0164293_10104545	All Organisms → Viruses → Predicted Viral	2168	Open in IMG/M
3300013372\|Ga0177922_10801677	Not Available	776	Open in IMG/M
3300017766\|Ga0181343_1014065	All Organisms → Viruses → Predicted Viral	2532	Open in IMG/M
3300019784\|Ga0181359_1013753	All Organisms → Viruses → Predicted Viral	2954	Open in IMG/M
3300020048\|Ga0207193_1124570	All Organisms → Viruses → Predicted Viral	2249	Open in IMG/M
3300020151\|Ga0211736_10745817	All Organisms → Viruses	805	Open in IMG/M
3300020159\|Ga0211734_10354232	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae	824	Open in IMG/M
3300020159\|Ga0211734_11129740	All Organisms → Viruses → Predicted Viral	1565	Open in IMG/M
3300020161\|Ga0211726_10700722	All Organisms → Viruses → Predicted Viral	1038	Open in IMG/M
3300020162\|Ga0211735_10591845	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	665	Open in IMG/M
3300020172\|Ga0211729_11482821	All Organisms → Viruses → Predicted Viral	1812	Open in IMG/M
3300020205\|Ga0211731_11163567	All Organisms → Viruses → Predicted Viral	2346	Open in IMG/M
3300020527\|Ga0208232_1039987	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	616	Open in IMG/M
3300020550\|Ga0208600_1050207	All Organisms → Viruses	625	Open in IMG/M
3300021962\|Ga0222713_10709985	Not Available	572	Open in IMG/M
3300021963\|Ga0222712_10465715	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	755	Open in IMG/M
3300022407\|Ga0181351_1135201	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	906	Open in IMG/M
3300022591\|Ga0236341_1002104	Not Available	10488	Open in IMG/M
3300022591\|Ga0236341_1052263	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1044	Open in IMG/M
3300023184\|Ga0214919_10079205	All Organisms → Viruses → Predicted Viral	2913	Open in IMG/M
3300024348\|Ga0244776_10358468	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	979	Open in IMG/M
3300027468\|Ga0209247_1007868	All Organisms → Viruses → Predicted Viral	1395	Open in IMG/M
3300027468\|Ga0209247_1013026	All Organisms → Viruses → Predicted Viral	1102	Open in IMG/M
3300027499\|Ga0208788_1119405	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	606	Open in IMG/M
3300027586\|Ga0208966_1012936	All Organisms → Viruses → Predicted Viral	2480	Open in IMG/M
3300027621\|Ga0208951_1143271	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	627	Open in IMG/M
3300027659\|Ga0208975_1173190	Not Available	590	Open in IMG/M
3300027708\|Ga0209188_1000056	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae	130972	Open in IMG/M
3300027712\|Ga0209499_1000774	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae	23299	Open in IMG/M
3300027732\|Ga0209442_1098287	All Organisms → Viruses → Predicted Viral	1182	Open in IMG/M
3300027732\|Ga0209442_1115873	All Organisms → Viruses → Predicted Viral	1063	Open in IMG/M
3300027734\|Ga0209087_1039442	All Organisms → Viruses → Predicted Viral	2214	Open in IMG/M
3300027734\|Ga0209087_1153789	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae	922	Open in IMG/M
3300027736\|Ga0209190_1016763	All Organisms → Viruses → Predicted Viral	4185	Open in IMG/M
3300027741\|Ga0209085_1007344	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae	5661	Open in IMG/M
3300027744\|Ga0209355_1025295	All Organisms → Viruses → Predicted Viral	3020	Open in IMG/M
3300027746\|Ga0209597_1149335	All Organisms → Viruses → Predicted Viral	1000	Open in IMG/M
3300027759\|Ga0209296_1043074	All Organisms → Viruses → Predicted Viral	2401	Open in IMG/M
3300027759\|Ga0209296_1187494	Not Available	897	Open in IMG/M
3300027760\|Ga0209598_10060509	All Organisms → Viruses → Predicted Viral	1906	Open in IMG/M
3300027772\|Ga0209768_10016524	All Organisms → Viruses → Predicted Viral	4173	Open in IMG/M
3300027777\|Ga0209829_10156740	All Organisms → Viruses → Predicted Viral	1035	Open in IMG/M
3300027782\|Ga0209500_10005896	All Organisms → Viruses	7923	Open in IMG/M
3300027782\|Ga0209500_10055846	All Organisms → Viruses → Predicted Viral	2087	Open in IMG/M
3300027798\|Ga0209353_10162013	Not Available	993	Open in IMG/M
3300027805\|Ga0209229_10245848	All Organisms → Viruses	796	Open in IMG/M
3300027805\|Ga0209229_10401697	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	595	Open in IMG/M
3300027808\|Ga0209354_10071505	All Organisms → Viruses → Predicted Viral	1406	Open in IMG/M
3300027816\|Ga0209990_10142231	All Organisms → Viruses → Predicted Viral	1142	Open in IMG/M
3300027892\|Ga0209550_10716388	Not Available	573	Open in IMG/M
3300027969\|Ga0209191_1005656	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae	7053	Open in IMG/M
3300027969\|Ga0209191_1179786	Not Available	845	Open in IMG/M
3300028025\|Ga0247723_1001775	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae	12218	Open in IMG/M
3300028025\|Ga0247723_1002043	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae	11147	Open in IMG/M
3300028025\|Ga0247723_1005539	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	5670	Open in IMG/M
3300028025\|Ga0247723_1005783	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae	5507	Open in IMG/M
3300028025\|Ga0247723_1030011	All Organisms → Viruses → Predicted Viral	1724	Open in IMG/M
3300028392\|Ga0304729_1005241	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae	6832	Open in IMG/M
3300031786\|Ga0315908_10204828	All Organisms → Viruses → Predicted Viral	1637	Open in IMG/M
3300031857\|Ga0315909_10345451	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1090	Open in IMG/M
3300031857\|Ga0315909_10501404	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	838	Open in IMG/M
3300031857\|Ga0315909_10927385	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	534	Open in IMG/M
3300031951\|Ga0315904_10021712	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae → unclassified Myoviridae → Pelagibacter phage HTVC008M	7679	Open in IMG/M
3300031951\|Ga0315904_10350573	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1359	Open in IMG/M
3300031963\|Ga0315901_10021950	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae	6716	Open in IMG/M
3300032050\|Ga0315906_11044287	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	610	Open in IMG/M
3300032092\|Ga0315905_10036498	All Organisms → Viruses → Predicted Viral	4994	Open in IMG/M
3300032116\|Ga0315903_10050867	All Organisms → Viruses → Predicted Viral	4221	Open in IMG/M
3300033992\|Ga0334992_0246635	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	863	Open in IMG/M
3300033994\|Ga0334996_0446649	Not Available	594	Open in IMG/M
3300033996\|Ga0334979_0751486	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	505	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	99.22%
Host-Associated	Host-Associated	0.78%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	93.75%
Terrestrial	Environmental → Terrestrial	5.47%
Plants	Host-Associated → Plants	0.78%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	89.84%
Deep Subsurface	Environmental → Terrestrial → Deep Subsurface	5.47%
Marine	Environmental → Aquatic → Marine	3.91%
Leaf	Host-Associated → Plants → Leaf	0.78%

Habitat	Taxonomy	Distribution
Lake	Environmental → Aquatic → Freshwater → Lake	42.97%
Lentic	Environmental → Aquatic → Freshwater → Lentic	33.59%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified	10.16%
Unclassified	Environmental → Terrestrial → Deep Subsurface → Unclassified	5.47%
Lotic	Environmental → Aquatic → Freshwater → Lotic	2.34%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	1.56%
Unclassified	Environmental → Aquatic → Marine → Unclassified	1.56%
Ice	Environmental → Aquatic → Freshwater → Ice	0.78%
Coastal	Environmental → Aquatic → Marine → Coastal	0.78%
Unclassified	Host-Associated → Plants → Leaf → Unclassified	0.78%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	42.19%
Unclassified	Environmental → Aquatic → Freshwater → Lentic → Unclassified	31.25%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified → Unclassified	10.16%
Unclassified	Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified	5.47%
Epilimnion	Environmental → Aquatic → Freshwater → Lentic → Epilimnion	2.34%
Unclassified	Environmental → Aquatic → Freshwater → Lotic → Unclassified	2.34%
Estuary	Environmental → Aquatic → Marine → Intertidal Zone → Estuary	1.56%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	1.56%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	0.78%
Unclassified	Environmental → Aquatic → Freshwater → Ice → Unclassified	0.78%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	0.78%
Unclassified	Host-Associated → Plants → Leaf → Unclassified → Unclassified	0.78%

Habitat	Taxonomy	Distribution
Freshwater Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake	22.66%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake	21.88%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	9.38%
Freshwater	Environmental → Aquatic → Freshwater → Unclassified → Unclassified → Freshwater	7.81%
Freshwater Lentic	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lentic	5.47%
Freshwater, Plankton	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater, Plankton	5.47%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	3.91%
Deep Subsurface Sediment	Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified → Deep Subsurface Sediment	3.91%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Epilimnion → Freshwater	2.34%
Freshwater And Sediment	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater And Sediment	2.34%
River Water	Environmental → Aquatic → Freshwater → Unclassified → Unclassified → River Water	2.34%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater	1.56%
Estuarine	Environmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine	1.56%
Estuarine Water	Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water	1.56%
Deep Subsurface	Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified → Deep Subsurface	1.56%
Lake Chemocline	Environmental → Aquatic → Freshwater → Lake → Unclassified → Lake Chemocline	0.78%
Freshwater Lake Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Freshwater Lake Sediment	0.78%
Marine Plankton	Environmental → Aquatic → Freshwater → Lotic → Unclassified → Marine Plankton	0.78%
Freshwater	Environmental → Aquatic → Freshwater → Lotic → Unclassified → Freshwater	0.78%
Freshwater	Environmental → Aquatic → Freshwater → Lotic → Unclassified → Freshwater	0.78%
Freshwater	Environmental → Aquatic → Freshwater → Ice → Unclassified → Freshwater	0.78%
Estuary Water	Environmental → Aquatic → Marine → Coastal → Unclassified → Estuary Water	0.78%
Estuary	Host-Associated → Plants → Leaf → Unclassified → Unclassified → Estuary	0.78%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001847	Marine plankton microbial communities from the Amazon River plume, Atlantic Ocean - RCM41. ROCA_DNA251_0.2um_TAP-D_2a	Environmental	Open in IMG/M
3300002161	Freshwater and sediment microbial communities from dead zone in Sandusky Bay, Ohio, USA	Environmental	Open in IMG/M
3300002408	Freshwater microbial communities from Lake Mendota, WI, sample - 15JUL2010 deep hole epilimnion (Lake Mendota Combined assembly, ASSEMBLY_DATE=20140123)	Environmental	Open in IMG/M
3300002835	Freshwater microbial communities from Lake Mendota, WI - (Lake Mendota Combined Ray assembly, ASSEMBLY_DATE=20140605)	Environmental	Open in IMG/M
3300003277	Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM15.SD	Environmental	Open in IMG/M
3300003388	Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM110.SN	Environmental	Open in IMG/M
3300003393	Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM15.DD	Environmental	Open in IMG/M
3300003394	Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM15.SN	Environmental	Open in IMG/M
3300003411	Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM110.SD	Environmental	Open in IMG/M
3300003430	Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MLB.SD	Environmental	Open in IMG/M
3300004763	Metatranscriptome of freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM110.DD (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004788	Metatranscriptome of freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM15.SD (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004795	Metatranscriptome of freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MLB.DD (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005527	Freshwater lake microbial communities from Lake Erie, under a cyanobacterial bloom - NOAA_Erie_Diel5S_2200h metaG	Environmental	Open in IMG/M
3300005580	Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG MI27MSRF	Environmental	Open in IMG/M
3300005581	Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG ER78MSRF	Environmental	Open in IMG/M
3300005582	Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG ER15MSRF	Environmental	Open in IMG/M
3300005662	Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MLB.SD (version 4)	Environmental	Open in IMG/M
3300007973	Coastal water column microbial communities from Columbia River Estuary, Oregon, USA - CMOP_DNA_1460A_0.2um	Environmental	Open in IMG/M
3300008055	Metatranscriptomes of the Eelgrass leaves and roots. Combined Assembly of Gp0128390, Gp0128391, Gp0128392, and Gp0128393	Host-Associated	Open in IMG/M
3300008107	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE2, Sample E2014-0046-3-NA	Environmental	Open in IMG/M
3300008113	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE4, Sample E2014-0050-3-NA	Environmental	Open in IMG/M
3300008119	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE4, Sample E2014-0110-C-NA	Environmental	Open in IMG/M
3300008258	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE4, Sample HABS-E2014-0110-3-NA	Environmental	Open in IMG/M
3300008996	Estuarine microbial communities from the Columbia River estuary - Freshwater metaG S.747	Environmental	Open in IMG/M
3300009068	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_140807_MF_MetaG	Environmental	Open in IMG/M
3300009151	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_130820_MF_MetaG	Environmental	Open in IMG/M
3300009154	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_131016_EF_MetaG	Environmental	Open in IMG/M
3300009155	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_130807_EF_MetaG	Environmental	Open in IMG/M
3300009159	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140212_EF_MetaG	Environmental	Open in IMG/M
3300009164	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130626_EF_MetaG	Environmental	Open in IMG/M
3300009183	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130206_EF_MetaG	Environmental	Open in IMG/M
3300009218	Microbial communities of water from Amazon river, Brazil - RCM1	Environmental	Open in IMG/M
3300009223	Microbial communities of water from Amazon river, Brazil - RCM3	Environmental	Open in IMG/M
3300009243	Microbial communities of water from Amazon river, Brazil - RCM13	Environmental	Open in IMG/M
3300009419	Subsurface microbial communities from deep shales in Ohio, USA - Utica-3 well 1 S input2 FT	Environmental	Open in IMG/M
3300010334	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_130820_EF_MetaG (v2)	Environmental	Open in IMG/M
3300010965	Microbial communities from Lake Cadagno chemocline, Switzerland. Combined Assembly of Gp0156211, Gp0156621	Environmental	Open in IMG/M
3300011010	Freshwater microbial communities from Western Basin Lake Erie, Ontario, Canada - Station 970 - Surface Ice	Environmental	Open in IMG/M
3300011268	Sub-surface freshwater microbial communities from San Francisco Estuary Delta, California, USA . Combined Assembly of Gp0173482, Gp0175554, Gp0175555	Environmental	Open in IMG/M
3300011995	Freshwater microbial communities from Central Basin Lake Erie, Ontario, Canada - Station 880 - Top - Depth 1m	Environmental	Open in IMG/M
3300012012	Freshwater microbial communities from Eastern Basin Lake Erie, Ontario, Canada - Station 879 - Top - Depth 1m	Environmental	Open in IMG/M
3300012352	Freshwater microbial communities from Baxter Creek, Ontario, Canada - S37	Environmental	Open in IMG/M
3300012781	Freshwater microbial communities from Lake Simoncouche, Canada - S_130712_E_mt (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300013004	Eutrophic lake water microbial communities from Lake Mendota, Wisconsin, USA - GEODES118 metaG	Environmental	Open in IMG/M
3300013372	Freshwater microbial communities from Lake Erie, Ontario, Canada. Combined Assembly of 10 SPs	Environmental	Open in IMG/M
3300017766	Freshwater viral communities from Lake Michigan, USA - Su13.VD.MLB.S.D	Environmental	Open in IMG/M
3300019784	Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM15.S.D	Environmental	Open in IMG/M
3300020048	Microbial communities from Manganika and McQuade lakes, Minnesota, USA Combined Assembly of Gp0225457, Gp0225456, Gp0225455, Gp0225454, Gp0225453, Gp0224915	Environmental	Open in IMG/M
3300020151	Freshwater lake microbial communities from Lake Erken, Sweden - P4710_202 megahit1	Environmental	Open in IMG/M
3300020159	Freshwater lake microbial communities from Lake Erken, Sweden - P4710_108 megahit1	Environmental	Open in IMG/M
3300020161	Freshwater lake microbial communities from Lake Erken, Sweden - P4710_101 megahit1	Environmental	Open in IMG/M
3300020162	Freshwater lake microbial communities from Lake Erken, Sweden - P4710_201 megahit1	Environmental	Open in IMG/M
3300020172	Freshwater lake microbial communities from Lake Erken, Sweden - P4710_102 megahit1	Environmental	Open in IMG/M
3300020205	Freshwater lake microbial communities from Lake Erken, Sweden - P4710_103 megahit1	Environmental	Open in IMG/M
3300020527	Freshwater microbial communities from Lake Mendota, WI - 24AUG2012 deep hole epilimnion (SPAdes)	Environmental	Open in IMG/M
3300020550	Freshwater microbial communities from Lake Mendota, WI - 08OCT2012 deep hole epilimnion (SPAdes)	Environmental	Open in IMG/M
3300021962	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_649D	Environmental	Open in IMG/M
3300021963	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_657D	Environmental	Open in IMG/M
3300022407	Freshwater viral communities from Lake Michigan, USA - Su13.VD.MM15.S.D	Environmental	Open in IMG/M
3300022591	Freshwater microbial communities from thermokarst lake SAS2a, Kuujjuarapick, Canada - Sample Summer S2	Environmental	Open in IMG/M
3300023184	Freshwater microbial communities from Lake Lanier, Atlanta, Georgia, United States - LL-1503	Environmental	Open in IMG/M
3300024348	0.2um to 3um size fraction coassembly	Environmental	Open in IMG/M
3300027468	Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MM110.DN (SPAdes)	Environmental	Open in IMG/M
3300027499	Deep subsurface shale carbon reservoir microbial communities from Ohio, USA - Utica-2 Time Series FC 2014_7_11 (SPAdes)	Environmental	Open in IMG/M
3300027586	Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG HU45MSRF (SPAdes)	Environmental	Open in IMG/M
3300027621	Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG MI27MSRF (SPAdes)	Environmental	Open in IMG/M
3300027659	Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG ER78MSRF (SPAdes)	Environmental	Open in IMG/M
3300027708	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_130625_EF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027712	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_130208_EF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027732	Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM110.DD (SPAdes)	Environmental	Open in IMG/M
3300027734	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130805_EF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027736	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_140205_XF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027741	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_131016_EF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027744	Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM110.SN (SPAdes)	Environmental	Open in IMG/M
3300027746	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_140625_MF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027759	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130206_EF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027760	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_140807_EF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027772	Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM110.SD (SPAdes)	Environmental	Open in IMG/M
3300027777	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_140205_EF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027782	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140212_EF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027798	Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM15.SD (SPAdes)	Environmental	Open in IMG/M
3300027805	Freshwater and sediment microbial communities from dead zone in Sandusky Bay, Ohio, USA (SPAdes)	Environmental	Open in IMG/M
3300027808	Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM15.DD (SPAdes)	Environmental	Open in IMG/M
3300027816	Freshwater lake microbial communities from Lake Erie, under a cyanobacterial bloom - NOAA_Erie_Diel5S_2200h metaG (SPAdes)	Environmental	Open in IMG/M
3300027892	Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MM15.SN (SPAdes)	Environmental	Open in IMG/M
3300027969	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130626_EF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300028025	Subsurface sediment microbial communities from gas well in West Virginia, United States - MSEEL Well Study Marcellus 5H_FC	Environmental	Open in IMG/M
3300028392	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_131016_MF_MetaG (v2)	Environmental	Open in IMG/M
3300031786	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 4 MA124	Environmental	Open in IMG/M
3300031857	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 2 MA125	Environmental	Open in IMG/M
3300031951	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 12 MA120	Environmental	Open in IMG/M
3300031963	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 2 MA116	Environmental	Open in IMG/M
3300032050	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 2 MA122	Environmental	Open in IMG/M
3300032092	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 4 MA121	Environmental	Open in IMG/M
3300032116	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 2 MA119	Environmental	Open in IMG/M
3300033992	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME16Jun2014-rr0035	Environmental	Open in IMG/M
3300033994	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME25Jul2006D11-rr0046	Environmental	Open in IMG/M
3300033996	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME20Jul2016-rr0004	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
RCM41_10166862	3300001847	Marine Plankton	MWDDFDDFELACLCADYGMEEELDISDILPLKLANRAKIEELLTQFELEIAFGE*
JGI24766J26685_100686942	3300002161	Freshwater And Sediment	MKNQWSGFDDFELACLCADYGYEDALDIASILPVKLANRVEIEALLTKHELEMAFGE*
B570J29032_1092382012	3300002408	Freshwater	MEKTMQNQWSGFDDFELACLCADYGYEDVLDIVEILPVKLANRAEIEALLTKHEFEMAFGE*
B570J29032_1099168032	3300002408	Freshwater	MEKIMENQWSGFDDFELACLCADYGYEDALEIVEILPVKLGNRAQIETLLTQHEFEMAFGE*
B570J40625_1001748822	3300002835	Freshwater	MEKIMENQWTGFDDFELACLCADYGYEDALEIVEILPVKLGNRAQIETLLTQHEFEMAFGE*
JGI25908J49247_101359792	3300003277	Freshwater Lake	YNSRYIMEKTMENQWAGFDDFELACLCHGYGIEEECVFEGILPVKLANRAQIEALLTEFEFEMAFGE*
JGI25910J50241_100260372	3300003388	Freshwater Lake	MENQWAGFDDFELACLCHGYGIEEECVFEGILPVKLANRAQIEALLTEFEFEMAFGE*
JGI25910J50241_100381033	3300003388	Freshwater Lake	MENQWVDFDDFELACLCHGYGIEEECVFEGILPVVLANRAQIEALLTDLEFELAFGE*
JGI25910J50241_100713723	3300003388	Freshwater Lake	MEKTMENQWAGFDDFELACLCHGYGIEEECVFEGILPVKLANRAQIEALLTEFEFEMAFGE*
JGI25909J50240_10062342	3300003393	Freshwater Lake	MEKTMENQWAGFDDFELACLCHGYGIEEECVFEGILPVKLANRAXIEALLTEFEFEXAFGE*
JGI25907J50239_10350921	3300003394	Freshwater Lake	MEIAMENQWSGFDDFELACLCHGYGIEEECVFEGILPVKLANRAKIEALLTEFEFELAFGE*
JGI25911J50253_100576992	3300003411	Freshwater Lake	MENQWAGFDDFELAXLCHGYGIEEECVFEGILPVKLANRAQIEALLTEFEFEMAFGE*
JGI25921J50272_100109282	3300003430	Freshwater Lake	MENQWSGFDDFELACLCADYGYEDALDIASILPIKLANRAEIEALLTKHELELAFGE*
Ga0007746_10689393	3300004763	Freshwater Lake	MENQWSGFDDFELACLCHGYGIEEECVFEGILPVKLANRAKIEALLTEFEFELAFGE*
Ga0007742_110527931	3300004788	Freshwater Lake	FDDFELACLCHGYGIEEECVFEGILPVKLANRAQIEALLTEFEFEMAFGE*
Ga0007756_101603431	3300004795	Freshwater Lake	GFDDFELACLCADYGYEDALDIASILPIKLANRAEIEALLTKHELELAFGE*
Ga0068876_101722822	3300005527	Freshwater Lake	MENQWAGFDDFELACLCADYGYEDVLVIAGILPLKLANRVEIETLLTRHELELAFGE*
Ga0068876_104768592	3300005527	Freshwater Lake	MEKFMENQWSGFDDFELACLCADYGYEDALEIVEILPVKLANRAKIEALLTEHELEMAFGE*
Ga0049083_102134142	3300005580	Freshwater Lentic	MENQWAGFDDFELACLCHGYGIEEECVFEGILPVVLANRAQIEALL
Ga0049081_100073962	3300005581	Freshwater Lentic	MEKIMKNQWSGFDDFELACLCADYGYEDALEIVEILPVKLANRAKIEALLTEHELEMAFGE*
Ga0049080_100920662	3300005582	Freshwater Lentic	MENQWAGFDDFELACLCHGYGIEEECVFEGILPVKLANRAKIEALLTEFEFELAFGE*
Ga0049080_103026012	3300005582	Freshwater Lentic	MQNQWSDFDDFDLACLCHSYGIEEECVFAAILPVKLANRAQIEALLTEFEFELAFGE*
Ga0078894_101012382	3300005662	Freshwater Lake	MEKFMENQWSGFDDFELACLCADYGYEDALDISGILPIKLANRAEIESLLTQHELEMAFGE*
Ga0078894_109743132	3300005662	Freshwater Lake	MQNQWSGFDDFELACLCADYGYEDVLDIVEILPVKLANRAEIEALLTKHEFELAFGE*
Ga0105746_10582462	3300007973	Estuary Water	MEKTMENQWAGFDDFELACLCHGYGIEEECVFEGILPVKLANRTQIEALLTEFEFEMAFGE*
Ga0108970_115430811	3300008055	Estuary	MEKIMQNQWSSFDDFELASLCHKYDIGNVCEFEHILPIKLANRDV
Ga0114340_10021326	3300008107	Freshwater, Plankton	MEIVMENQWAGFDDFELACLCADYGYEDVLVIAGILPLKLANRVEIETLLTRHELELAFGE*
Ga0114340_10130032	3300008107	Freshwater, Plankton	MEKFMENQWSGFDDFELACLCADYGYEDALDIASILPIKLANRAEIEALLTKHELELAFGE*
Ga0114346_10101153	3300008113	Freshwater, Plankton	MENFMENQWSGFDDFELACLCHSYGIEEECVFESILPVKLANRAQIEALLTEFEFELAFGE*
Ga0114346_12236593	3300008113	Freshwater, Plankton	MEKIMKNQWSGFDDFELACLCADYGYEDALEIVEILPVKLGKRAQIETLLTQHEFEMAFGE*
Ga0114346_12777521	3300008113	Freshwater, Plankton	MEKFMENQWSGFDDFELACLCADYGYEDALDIASILPIKLANRAEIEALLTKHELE
Ga0114354_10167483	3300008119	Freshwater, Plankton	MEKTMENQWAGFDDFELACLCHGYGIEEECQFASILPVVLANRAQIEALLTEFEFELAFGE*
Ga0114840_10309882	3300008258	Freshwater, Plankton	MENFMENQWSGFDDFELACLCADYGYEDALDIASILPIKLANRAEIEALLTKHELELAFGE*
Ga0102831_12157532	3300008996	Estuarine	EKTMENQWAGFDDFELACLCHGYGIEEECVFEAILPVKLANRAQIEALLTEFEFELAFGE
Ga0114973_1000168214	3300009068	Freshwater Lake	MENFMENQWSGFDDFELACLCHSYGIEEECQFASILPVVLANRKQIETLLTEFEFELAFGE*
Ga0114962_100111125	3300009151	Freshwater Lake	MEKTMQNQWSGFDDFELACLCADYGYEDVLDIVEILPVKLANRAEIEALLTKHEFELAFGE*
Ga0114962_100218142	3300009151	Freshwater Lake	MYNSRYIMEKTMENQWAGFDDFELACLCHGYGIEEECVFEGILPVKLANRAQIESLLTEFEFELAFGE*
Ga0114963_100119404	3300009154	Freshwater Lake	MEKTMENQWAGFDDFELACLCHGYGIEEECVFEGILPVKLANRAQIESLLTEFEFELAFGE*
Ga0114968_101193352	3300009155	Freshwater Lake	MEKTMENQWAGFDDFELACLCHGYGIEEECVFEGILPVKLANRAQIEALLTEFEFELAFGE*
Ga0114968_102368032	3300009155	Freshwater Lake	MENAMENQWSGFDDFELACLCADYGYEDVLDISAILPVKLANRAEIEALLTKHELELAFGE*
Ga0114978_101032442	3300009159	Freshwater Lake	MEKTMENQWAGFDDFELACLCHGYGIEEECVFEAILPVKLANRAQIEALLTEFEFELAFGE*
Ga0114975_100818452	3300009164	Freshwater Lake	MEKFMENQWSGFDDFELACLCADYGYEDALDIAAILPVKLANRAEIEALLTKHELELAFGE*
Ga0114974_101998331	3300009183	Freshwater Lake	MEKTMENQWSGFDDFELACLCQDYGFEDLIQIESILPVKLKNRAEVEKFLTEYEMAEAFGE*
Ga0114974_102910272	3300009183	Freshwater Lake	MEKTMENQWSGFDDFDLACLCADYGYEDALDIASILPVKLANRAEIEALLTKHELELAFGE*
Ga0114974_105623661	3300009183	Freshwater Lake	MEKFMENQWSGFDDFELACLCADYGYEDVLDIAAILPVKLANRAEIEALLTKHELELAFGE*
Ga0103848_10007715	3300009218	River Water	DFDDFELACLCADYGMEEELDISDILPLKLANRAKIEELLTQFELEIAFGE*
Ga0103850_10374721	3300009223	River Water	FDDFELACLCADYGMEEELDISDILPLKLANRAKIEELLTQFELEIAFGE*
Ga0103860_100660962	3300009243	River Water	FELACLCADYGYEDALDIVEILPVRLGNRAEIEALLTRHEFEMAFPVDINCELV*
Ga0114982_10786612	3300009419	Deep Subsurface	MEKTMENQWAGFDDFELACLCADYGYEDALDIVEILPVKLSNRAEIEALLTEHEFELAFGE*
Ga0136644_107734471	3300010334	Freshwater Lake	MEKFMENQWSGFDDFELACLCHGYGIEEECVFEGILPVKLANRAQIETLLTEFEFELAFGE*
Ga0138308_1277864	3300010965	Lake Chemocline	MENAMENQWSGFDDFELACLCHDYGIEEECVFAGILPVKLANRAKIEALLTEFEFELAFGE*
Ga0139557_10327191	3300011010	Freshwater	MEKTMENQWAGFDDFELACLCHGYGIEEECVFEGILPVKLANRAKIEALLTEFEFELAFGE*
Ga0151620_10012106	3300011268	Freshwater	MWNDFSDFELACLFVDYGYSEDELDIVGILPLKLANREHIESVLTTHELEMAFGE*
Ga0153800_10254672	3300011995	Freshwater	MEKTMENQWAGFDDFELACLCHGYGIEEECVFKGILPVKLANRAKIEALLTEFEFEMAFGE*
Ga0153799_10033183	3300012012	Freshwater	MEKTMQNQWSDFDDFDLACLCHSYGIEEECVFAAILPVKLANRAQIEALLTEFEFELAFGE*
Ga0157138_10026653	3300012352	Freshwater	MENAMENQWSGFDDFELACLCADYGYEDALELAGILPVKLANRAEIEALLTEHELEMAFGE*
Ga0138286_12944761	3300012781	Freshwater Lake	TMENQWAGFDDFELACLCHGYGIEEECVFEGILPVKLANRAQIEALLTEFEFELAFGE*
Ga0164293_101045453	3300013004	Freshwater	MEKLMENQWSGFDDFELACLCADYGYEDALEIVEILPVKLGNRAQIETLLTQHEFEMAFGE*
Ga0177922_108016771	3300013372	Freshwater	MEKTMENQWVDFDDFELACLCHGYGIEEECVFEGILPVKLANRAKIEALLTEFEFELAFGE*
Ga0181343_10140651	3300017766	Freshwater Lake	YIMEKFMENQWSGFDDFELACLCADYGYEDALDISGILPIKLANRAEIESLLTQHELEMAFGE
Ga0181359_10137531	3300019784	Freshwater Lake	MEIAMENQWSGFDDFELACLCHGYGIEEECVFEGILPVKLANRAKIEALLTEFEFELAFG
Ga0207193_11245702	3300020048	Freshwater Lake Sediment	MENQWSGFDDFELACLCADYGYEDALDIASILPIKLANRAEIEALLTKHELELAFGE
Ga0211736_107458172	3300020151	Freshwater	MQNQWSGFDDFELACLCHSYGIEEECVFEGILPVKLANRAQIEALLTEFEFELAFGE
Ga0211734_103542322	3300020159	Freshwater	MQNQWSDFDDFDLACLCHSYGIEEECVFAAILPVKLANRAQIEALLTEFEFELAFGE
Ga0211734_111297402	3300020159	Freshwater	MEKIMENQWSGFDDFELACLCADYGYEDALEIVEILPVKLANRAKIEALLTEHELEMAFG
Ga0211726_107007222	3300020161	Freshwater	MQNQWSGFDDFELACLCHGYGIEEECVFEGILPVKLANRAHIEALLTEFEFEMAFGE
Ga0211735_105918452	3300020162	Freshwater	MENQWSGFDDFELACLCADYGYEDALEIVEILPVKLANRAKIEALLTEHELEMAFGE
Ga0211729_114828211	3300020172	Freshwater	MEKTMQNQWSGFDDFELACLCHGYGIEEECVFEGILPVKLANRAHIEALLT
Ga0211731_111635672	3300020205	Freshwater	MEKTMQNQWSDFDDFDLACLCHSYGIEEECVFAAILPVKLANRAKIEALLTEFEFELAFG
Ga0208232_10399872	3300020527	Freshwater	MQNQWSGFDDFELACLCADYGYEDVLDIVEILPVKLANRAEIEALLTKHEFEMAFGE
Ga0208600_10502072	3300020550	Freshwater	MEKIMENQWSGFDDFELACLCADYGYEDALEIVEILPVKLGNRAQIETLLTQHEFEMAFG
Ga0222713_107099851	3300021962	Estuarine Water	MWNDFSDFELACLFVDYGYSEDELDIVGILPLKLANREHIESVLTTHELEMAFGE
Ga0222712_104657152	3300021963	Estuarine Water	MENQWSGFSDFELACLFVDYGYSEDDLDIVGILPLKLANRAEIESVVTKHELELAFGE
Ga0181351_11352011	3300022407	Freshwater Lake	MENQWAGFDDFELACLCHGYGIEEECVFEGILPVKLANRAQIEALLTEFEFEMAFGE
Ga0236341_10021042	3300022591	Freshwater	MENQWAGFDDFELACLCADYGYEDLLDIAEILPVKLANRAEVEAVLTRHELEMAFGE
Ga0236341_10522631	3300022591	Freshwater	MENQWSGFDDFELACLCADYGYEDALDIASILPVKLANRAEIEALLTEHELEMAFGE
Ga0214919_100792052	3300023184	Freshwater	MENQWSGFSDFELACLFVDYGYSEDDLDIVGILPLKLANRAEIESVVTKHEFELAFGE
Ga0244776_103584681	3300024348	Estuarine	MENQWAGFDDFELACLCHGYGIEEECVFEGILPVKLANRAQIEALLTEFEFELAFGE
Ga0209247_10078681	3300027468	Freshwater Lake	MEIAMENQWSGFDDFELACLCHGYGIEEECVFEGILPVKLANRAKIEALLTEFEFELAF
Ga0209247_10130262	3300027468	Freshwater Lake	MENQWVDFDDFELACLCHGYGIEEECVFEGILPVVLANRAQIEALLTDLEFELAFGE
Ga0208788_11194052	3300027499	Deep Subsurface	MKNQWSGFDDFELACLCADYGYEDALEIVEILPVKLANRAKIEALLTEHELEMAFGE
Ga0208966_10129362	3300027586	Freshwater Lentic	MENQWAGFDDFELACLCHGYGIEEECVFEGILPVVLANRAQIEALLTDLEFELAFGE
Ga0208951_11432711	3300027621	Freshwater Lentic	MENQWSGFDDFELACLCHGYGIEEECVFEGILPVKLANRAKIEALLTEFEFELAFGE
Ga0208975_11731902	3300027659	Freshwater Lentic	MENQWAGFDDFELACLCHGYGIEEECVFEGILPVKLANRAKIEALLTEFEFELAFGE
Ga0209188_1000056216	3300027708	Freshwater Lake	MEKTMQNQWSGFDDFELACLCADYGYEDVLDIVEILPVKLANRAEIEALLTKHEFELAFG
Ga0209499_10007742	3300027712	Freshwater Lake	MQNQWSGFDDFELACLCADYGYEDVLDIVEILPVKLANRAEIEALLTKHEFELAFGE
Ga0209442_10982872	3300027732	Freshwater Lake	YNSRYIMEKTMENQWAGFDDFELACLCHGYGIEEECVFEGILPVKLANRAQIEALLTEFEFEMAFGE
Ga0209442_11158731	3300027732	Freshwater Lake	ENQWVDFDDFELACLCHGYGIEEECVFEGILPVVLANRAQIEALLTDLEFELAFGE
Ga0209087_10394422	3300027734	Freshwater Lake	MEKTMENQWSGFDDFDLACLCADYGYEDALDIASILPVKLANRAEIEALLTKHELELAFG
Ga0209087_11537892	3300027734	Freshwater Lake	MENQWSGFDDFELACLCADYGYEDALDIAAILPVKLANRAEIEALLTKHELELAFGE
Ga0209190_10167633	3300027736	Freshwater Lake	MENAMENQWSGFDDFELACLCADYGYEDVLDISAILPVKLANRAEIEALLTKHELELAFG
Ga0209085_10073445	3300027741	Freshwater Lake	MYNSRYIMEKTMENQWAGFDDFELACLCHGYGIEEECVFEGILPVKLANRAQIESLLTEFEFELAFGE
Ga0209355_10252953	3300027744	Freshwater Lake	MEKTMENQWAGFDDFELACLCHGYGIEEECVFEGILPVKLANRAQIEALLTEFEFEMAFG
Ga0209597_11493351	3300027746	Freshwater Lake	MENQWAGFDDFELACLCHGYGIEEECVFEAILPVKLANRAQIEALLTEFEFELAFGE
Ga0209296_10430741	3300027759	Freshwater Lake	MYNSRYIMEKTMENQWAGFDDFELACLCHGYGIEEECVFEGILPVKLANRAQIEALLTEFEF
Ga0209296_11874942	3300027759	Freshwater Lake	MENQWSGFDDFDLACLCADYGYEDALDIASILPVKLANRAEIEALLTKHELELAFGE
Ga0209598_100605092	3300027760	Freshwater Lake	MENFMENQWSGFDDFELACLCHSYGIEEECQFASILPVVLANRKQIETLLTEFEFELAFG
Ga0209768_100165243	3300027772	Freshwater Lake	MYNSRYIMEKTMENQWVDFDDFELACLCHGYGIEEECVFEGILPVVLANRAQIEALLTDLEFELAFGE
Ga0209829_101567401	3300027777	Freshwater Lake	MENQWAGFDDFELACLCHGYGIEEECVFEGILPVKLANRAQIESLLTE
Ga0209500_100058962	3300027782	Freshwater Lake	MEKTMENQWAGFDDFELACLCHGYGIEEECVFEAILPVKLANRAQIEALLTEFEFELAFG
Ga0209500_100558462	3300027782	Freshwater Lake	MEKTMENQWAGFDDFELACLCHGYGIEEECVFEGILPVKLANRAQIEALLTAFEFELAFG
Ga0209353_101620132	3300027798	Freshwater Lake	MEKTMENQWAGFDDFELACLCHGYGIEEECVFEGILPVKLANRAKIEALLTEFEFELAFG
Ga0209229_102458482	3300027805	Freshwater And Sediment	MKNQWSGFDDFELACLCADYGYEDALDIASILPVKLANRVEIEALLTKHELEMAFGE
Ga0209229_104016972	3300027805	Freshwater And Sediment	CLCADYGYEDALEIVEILPVKLGNRAQIETLLTQHEFEMAFGE
Ga0209354_100715053	3300027808	Freshwater Lake	MENQWSEFDDFELACLCADYGYEDVLDISAILPVKLANRAEIEALLTKHEFELAFGE
Ga0209990_101422312	3300027816	Freshwater Lake	SIVMEKIMKNQWSGFDDFELACLCADYGYEDALEIVEILPVKLANRAKIEALLTEHELEMAFGE
Ga0209550_107163881	3300027892	Freshwater Lake	MYNSRYIMEKTMENQWAGFDDFELACLCHGYGIEEECVFEGILPVKLANRAQIEALLTEFEFEMAFGE
Ga0209191_10056562	3300027969	Freshwater Lake	MYNSRYIMEKTMENQWAGFDDFELACLCHGYGIEEECVFEGILPVKLANRAQIEALLTEFEFELAFGE
Ga0209191_11797862	3300027969	Freshwater Lake	MEKFMENQWSGFDDFELACLCADYGYEDALDIAAILPVKLANRAEIEALLTKHELELAFG
Ga0247723_100177512	3300028025	Deep Subsurface Sediment	MKNQWSGFDDFELACLCADYGYEDTLEIVEILPVKLANRAKIEALLTEHELEMAFGE
Ga0247723_10020432	3300028025	Deep Subsurface Sediment	MENQWSGFDDFELACLCADYGYEDALEIVEILPVKLGNRAQIETLLTQHEFEMAFGE
Ga0247723_10055395	3300028025	Deep Subsurface Sediment	MEKTMENQWAGFDDFELACLCADYGYEDALDIVEILPVKLSNRAEIEALLTEHEFELAFG
Ga0247723_10057832	3300028025	Deep Subsurface Sediment	MQNQWSGFDDFELACLCADYGYEDVLDIVEILPVKLANRAEIEALLTEHEFEMAFGG
Ga0247723_10300112	3300028025	Deep Subsurface Sediment	MEKTMENQWSGFDDFELACLCADYGYEDALDIVEILPVKLANRAQIEALLTEHEFELAFG
Ga0304729_10052411	3300028392	Freshwater Lake	EKTMENQWAGFDDFELACLCHGYGIEEECVFEGILPVKLANRAQIESLLTEFEFELAFGE
Ga0315908_102048282	3300031786	Freshwater	MENQWDGFDDFELACLCHGYGIEEECQFASILPVVLANRKQIETLLTEFEFELAFGE
Ga0315909_103454512	3300031857	Freshwater	MEIVMENMWSGFDDFELACLCADYGYEDALDIAQILPVKLANRAEIEALLTRHELELAFG
Ga0315909_105014042	3300031857	Freshwater	MENQWDGFDDFELACLCHGYGIEEECVFEGILPVKLANRAQIEALLTEFEFELAFGE
Ga0315909_109273851	3300031857	Freshwater	MENMWSGFDDFELACLCADYGYEDVLEIVSILPVKLGNRAEIEALLTEHEFEMAYGE
Ga0315904_100217121	3300031951	Freshwater	MENMWSGFDDFELACLCADYGYEDVLDFAQILPVKLANRAEVEALLTRHELELAFGE
Ga0315904_103505732	3300031951	Freshwater	MEKIMENQWSGFDDFELACLCADYGYENALEIVEILPVKLANRAEIEALLTEHEFELAFG
Ga0315901_100219508	3300031963	Freshwater	MEIVMENQWAGFDDFELACLCADYGYEDVLVIAGILPLKLANRVEIETLLTRHELELAFG
Ga0315906_110442871	3300032050	Freshwater	MENMWSGFDDFELACLCADYGYEDALDIAQILPVKLANRAEIEALLTRHELELAFGE
Ga0315905_100364983	3300032092	Freshwater	MENFMENQWSGFDDFELACLCHSYGIEEECVFESILPVKLANRAQIEALLTEFEFELAFG
Ga0315903_100508672	3300032116	Freshwater	MEIVMENMWSGFDDFELACLCADYGYEDVLEIVSILPVKLGNRAEIEALLTEHEFEMAYG
Ga0334992_0246635_701_862	3300033992	Freshwater	WAGFDDFELACLCHGYGIEEECVFEGILPVKLANRAKIEALLTEFEFELAFGE
Ga0334996_0446649_404_589	3300033994	Freshwater	MEKIMKNQWSGFDDFELACLCADYGYEDALEIVEILPVKLGNRAQIETLLTQHEFEMAFG
Ga0334979_0751486_73_258	3300033996	Freshwater	MEKLMENQWSGFDDFELACLCADYGYEDALEIVEILPVKLGNRAQIETLLTQHEFEMAFG

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F064396

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Structural matches with SCOPe domains

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences