Metagenome / Metatranscriptome Family F064394

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F064394
Family Type	Metagenome / Metatranscriptome
Number of Sequences	128
Average Sequence Length	75 residues
Representative Sequence	MKHKEQIAIVARLRSFHAKDQEERLVGALRRWIEDPVKPKTDKGNLRINPILVLLTAMAVLAGGTFLFFSLVQL
Number of Associated Samples	70
Number of Associated Scaffolds	128

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	1.56 %
% of genes near scaffold ends (potentially truncated)	35.16 %
% of genes from short scaffolds (< 2000 bps)	66.41 %
Associated GOLD sequencing projects	62
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.36

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (92.969 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil (40.625 % of family members)
Environment Ontology (ENVO)	Unclassified (42.188 % of family members)
Earth Microbiome Project Ontology (EMPO)	Unclassified (41.406 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 54.90% β-sheet: 0.00% Coil/Unstructured: 45.10%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.36
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.36
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 128 Family Scaffolds
PF03524	CagX	26.56
PF02534	T4SS-DNA_transf	14.06
PF12846	AAA_10	6.25
PF00436	SSB	0.78
PF13338	AbiEi_4	0.78
PF04098	Rad52_Rad22	0.78
PF00873	ACR_tran	0.78
PF00158	Sigma54_activat	0.78
PF00271	Helicase_C	0.78
PF01464	SLT	0.78

COG ID	Name	Functional Category	% Frequency in 128 Family Scaffolds
COG3504	Type IV secretory pathway, VirB9 components	Intracellular trafficking, secretion, and vesicular transport [U]	26.56
COG3505	Type IV secretory pathway, VirD4 component, TraG/TraD family ATPase	Intracellular trafficking, secretion, and vesicular transport [U]	14.06
COG0629	Single-stranded DNA-binding protein	Replication, recombination and repair [L]	0.78
COG2965	Primosomal replication protein N	Replication, recombination and repair [L]	0.78

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	92.97 %
Unclassified	root	N/A	7.03 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	92.97 %
Unclassified	root	N/A	7.03 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	92.97 %
Unclassified	root	N/A	7.03 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	88.28 %
Unclassified	root	N/A	7.03 %

Name	Rank	Taxonomy	Distribution
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	17.97 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	7.03 %
Unclassified	root	N/A	7.03 %

Name	Rank	Taxonomy	Distribution
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	13.28 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	7.03 %
Unclassified	root	N/A	7.03 %
Bryobacterales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	1.56 %

Name	Rank	Taxonomy	Distribution
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	13.28 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	7.03 %
Unclassified	root	N/A	7.03 %
Bryobacteraceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae	1.56 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	7.03 %
Unclassified	root	N/A	7.03 %
unclassified Acidobacteriaceae	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae	4.69 %
Bryobacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → Bryobacter	1.56 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	7.03 %
Unclassified	root	N/A	7.03 %
Acidobacteriaceae bacterium TAA 166	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium TAA 166	2.34 %
Acidobacteriaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium	2.34 %
Bryobacter aggregatus	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → Bryobacter → Bryobacter aggregatus	1.56 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000546\|LJNas_1002861	All Organisms → cellular organisms → Bacteria → Acidobacteria	2035	Open in IMG/M
3300002245\|JGIcombinedJ26739_100251487	All Organisms → cellular organisms → Bacteria → Acidobacteria	1655	Open in IMG/M
3300005332\|Ga0066388_100557092	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1775	Open in IMG/M
3300005458\|Ga0070681_10133446	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2414	Open in IMG/M
3300005534\|Ga0070735_10006241	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	9718	Open in IMG/M
3300005537\|Ga0070730_10020037	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	5211	Open in IMG/M
3300005537\|Ga0070730_10025575	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	4515	Open in IMG/M
3300005538\|Ga0070731_10161372	All Organisms → cellular organisms → Bacteria	1488	Open in IMG/M
3300005541\|Ga0070733_10143248	All Organisms → cellular organisms → Bacteria → Acidobacteria	1547	Open in IMG/M
3300005541\|Ga0070733_10780370	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium TAA 166	642	Open in IMG/M
3300005542\|Ga0070732_10315902	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium TAA 166	939	Open in IMG/M
3300005542\|Ga0070732_10567333	All Organisms → cellular organisms → Bacteria → Acidobacteria	689	Open in IMG/M
3300005712\|Ga0070764_10003727	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium TAA 166	7083	Open in IMG/M
3300006052\|Ga0075029_100070060	All Organisms → cellular organisms → Bacteria → Acidobacteria	2060	Open in IMG/M
3300007982\|Ga0102924_1001762	All Organisms → cellular organisms → Bacteria	24447	Open in IMG/M
3300009839\|Ga0116223_10163360	All Organisms → cellular organisms → Bacteria → Acidobacteria	1377	Open in IMG/M
3300010339\|Ga0074046_10020538	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	4639	Open in IMG/M
3300010341\|Ga0074045_10055080	All Organisms → cellular organisms → Bacteria → Acidobacteria	2863	Open in IMG/M
3300010360\|Ga0126372_13296130	All Organisms → cellular organisms → Bacteria → Acidobacteria	502	Open in IMG/M
3300010379\|Ga0136449_101965537	All Organisms → cellular organisms → Bacteria → Acidobacteria	866	Open in IMG/M
3300011411\|Ga0153933_1138636	All Organisms → cellular organisms → Bacteria → Acidobacteria	515	Open in IMG/M
3300012683\|Ga0137398_10045969	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	2562	Open in IMG/M
3300014657\|Ga0181522_10152241	All Organisms → cellular organisms → Bacteria → Acidobacteria	1352	Open in IMG/M
3300017822\|Ga0187802_10149205	All Organisms → cellular organisms → Bacteria → Acidobacteria	893	Open in IMG/M
3300017822\|Ga0187802_10421727	All Organisms → cellular organisms → Bacteria → Acidobacteria	529	Open in IMG/M
3300017823\|Ga0187818_10273891	All Organisms → cellular organisms → Bacteria → Acidobacteria	740	Open in IMG/M
3300017823\|Ga0187818_10361455	All Organisms → cellular organisms → Bacteria → Acidobacteria	642	Open in IMG/M
3300017823\|Ga0187818_10521064	All Organisms → cellular organisms → Bacteria → Acidobacteria	534	Open in IMG/M
3300017924\|Ga0187820_1264821	Not Available	556	Open in IMG/M
3300017933\|Ga0187801_10330735	All Organisms → cellular organisms → Bacteria → Acidobacteria	624	Open in IMG/M
3300017943\|Ga0187819_10083526	All Organisms → cellular organisms → Bacteria → Acidobacteria	1907	Open in IMG/M
3300017943\|Ga0187819_10318699	All Organisms → cellular organisms → Bacteria → Acidobacteria	901	Open in IMG/M
3300017943\|Ga0187819_10443922	All Organisms → cellular organisms → Bacteria → Acidobacteria	743	Open in IMG/M
3300017955\|Ga0187817_10177631	Not Available	1356	Open in IMG/M
3300017955\|Ga0187817_10545320	All Organisms → cellular organisms → Bacteria	740	Open in IMG/M
3300017955\|Ga0187817_10589674	All Organisms → cellular organisms → Bacteria → Acidobacteria	709	Open in IMG/M
3300017961\|Ga0187778_10094255	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1856	Open in IMG/M
3300017961\|Ga0187778_10427300	All Organisms → cellular organisms → Bacteria → Acidobacteria	872	Open in IMG/M
3300017961\|Ga0187778_10513042	All Organisms → cellular organisms → Bacteria → Acidobacteria	797	Open in IMG/M
3300017972\|Ga0187781_10029950	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	3761	Open in IMG/M
3300017972\|Ga0187781_10047782	All Organisms → cellular organisms → Bacteria → Acidobacteria	2944	Open in IMG/M
3300017988\|Ga0181520_10382878	All Organisms → cellular organisms → Bacteria → Acidobacteria	1025	Open in IMG/M
3300017995\|Ga0187816_10190215	All Organisms → cellular organisms → Bacteria → Acidobacteria	892	Open in IMG/M
3300017995\|Ga0187816_10260843	All Organisms → cellular organisms → Bacteria → Acidobacteria	757	Open in IMG/M
3300018006\|Ga0187804_10089871	Not Available	1251	Open in IMG/M
3300018006\|Ga0187804_10269510	All Organisms → cellular organisms → Bacteria → Acidobacteria	737	Open in IMG/M
3300018007\|Ga0187805_10102852	All Organisms → cellular organisms → Bacteria → Acidobacteria	1292	Open in IMG/M
3300018007\|Ga0187805_10132005	Not Available	1134	Open in IMG/M
3300018012\|Ga0187810_10166805	All Organisms → cellular organisms → Bacteria → Acidobacteria	888	Open in IMG/M
3300018062\|Ga0187784_10840523	All Organisms → cellular organisms → Bacteria → Acidobacteria	732	Open in IMG/M
3300018086\|Ga0187769_11158774	All Organisms → cellular organisms → Bacteria → Acidobacteria	585	Open in IMG/M
3300018088\|Ga0187771_10049728	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3263	Open in IMG/M
3300018088\|Ga0187771_11468503	All Organisms → cellular organisms → Bacteria → Acidobacteria	578	Open in IMG/M
3300018090\|Ga0187770_10090996	All Organisms → cellular organisms → Bacteria → Acidobacteria	2263	Open in IMG/M
3300018090\|Ga0187770_10459493	All Organisms → cellular organisms → Bacteria → Acidobacteria	1004	Open in IMG/M
3300020579\|Ga0210407_10079944	All Organisms → cellular organisms → Bacteria → Acidobacteria	2463	Open in IMG/M
3300021180\|Ga0210396_10043030	All Organisms → cellular organisms → Bacteria → Acidobacteria	4153	Open in IMG/M
3300021402\|Ga0210385_11100936	All Organisms → cellular organisms → Bacteria → Acidobacteria	610	Open in IMG/M
3300021407\|Ga0210383_10088726	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2595	Open in IMG/M
3300021474\|Ga0210390_10958304	All Organisms → cellular organisms → Bacteria → Acidobacteria	701	Open in IMG/M
3300021559\|Ga0210409_10066054	All Organisms → cellular organisms → Bacteria → Acidobacteria	3370	Open in IMG/M
3300022557\|Ga0212123_10000099	All Organisms → cellular organisms → Bacteria → Acidobacteria	287881	Open in IMG/M
3300025912\|Ga0207707_10123204	All Organisms → cellular organisms → Bacteria → Acidobacteria	2267	Open in IMG/M
3300027371\|Ga0209418_1087900	All Organisms → cellular organisms → Bacteria → Acidobacteria	558	Open in IMG/M
3300027583\|Ga0209527_1103346	All Organisms → cellular organisms → Bacteria → Acidobacteria	639	Open in IMG/M
3300027812\|Ga0209656_10244386	All Organisms → cellular organisms → Bacteria → Acidobacteria	851	Open in IMG/M
3300027842\|Ga0209580_10429330	All Organisms → cellular organisms → Bacteria → Acidobacteria	659	Open in IMG/M
3300027857\|Ga0209166_10000190	All Organisms → cellular organisms → Bacteria	79922	Open in IMG/M
3300027857\|Ga0209166_10000723	All Organisms → cellular organisms → Bacteria → Acidobacteria	32470	Open in IMG/M
3300027867\|Ga0209167_10042510	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2215	Open in IMG/M
3300027867\|Ga0209167_10191734	All Organisms → cellular organisms → Bacteria → Acidobacteria	1086	Open in IMG/M
3300027869\|Ga0209579_10103093	All Organisms → cellular organisms → Bacteria	1512	Open in IMG/M
3300027879\|Ga0209169_10061288	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1948	Open in IMG/M
3300027911\|Ga0209698_10005974	All Organisms → cellular organisms → Bacteria → Acidobacteria	13014	Open in IMG/M
3300027986\|Ga0209168_10011785	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	5189	Open in IMG/M
3300030991\|Ga0073994_12396547	All Organisms → cellular organisms → Bacteria → Acidobacteria	1042	Open in IMG/M
3300032770\|Ga0335085_10005330	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	20689	Open in IMG/M
3300032770\|Ga0335085_10124652	All Organisms → cellular organisms → Bacteria → Acidobacteria	3280	Open in IMG/M
3300032770\|Ga0335085_10259424	All Organisms → cellular organisms → Bacteria → Acidobacteria	2083	Open in IMG/M
3300032770\|Ga0335085_10349841	All Organisms → cellular organisms → Bacteria → Acidobacteria	1732	Open in IMG/M
3300032782\|Ga0335082_10108232	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2743	Open in IMG/M
3300032783\|Ga0335079_10342331	Not Available	1623	Open in IMG/M
3300032783\|Ga0335079_10406115	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium	1467	Open in IMG/M
3300032783\|Ga0335079_11422139	All Organisms → cellular organisms → Bacteria → Acidobacteria	688	Open in IMG/M
3300032805\|Ga0335078_10068502	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	5194	Open in IMG/M
3300032805\|Ga0335078_10301030	All Organisms → cellular organisms → Bacteria → Acidobacteria	2156	Open in IMG/M
3300032805\|Ga0335078_10398353	All Organisms → cellular organisms → Bacteria → Acidobacteria	1808	Open in IMG/M
3300032805\|Ga0335078_10417378	Not Available	1754	Open in IMG/M
3300032805\|Ga0335078_10755401	All Organisms → cellular organisms → Bacteria → Acidobacteria	1194	Open in IMG/M
3300032805\|Ga0335078_11117649	All Organisms → cellular organisms → Bacteria → Acidobacteria	919	Open in IMG/M
3300032805\|Ga0335078_11567609	All Organisms → cellular organisms → Bacteria → Acidobacteria	731	Open in IMG/M
3300032805\|Ga0335078_11830542	All Organisms → cellular organisms → Bacteria → Acidobacteria	658	Open in IMG/M
3300032805\|Ga0335078_12326087	All Organisms → cellular organisms → Bacteria → Acidobacteria	560	Open in IMG/M
3300032828\|Ga0335080_10956916	All Organisms → cellular organisms → Bacteria → Acidobacteria	875	Open in IMG/M
3300032828\|Ga0335080_11813986	All Organisms → cellular organisms → Bacteria → Acidobacteria	595	Open in IMG/M
3300032892\|Ga0335081_10055025	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	6205	Open in IMG/M
3300032892\|Ga0335081_10526879	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium	1478	Open in IMG/M
3300032895\|Ga0335074_10087725	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	4141	Open in IMG/M
3300032895\|Ga0335074_10177216	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2644	Open in IMG/M
3300032895\|Ga0335074_10240727	All Organisms → cellular organisms → Bacteria → Acidobacteria	2143	Open in IMG/M
3300032895\|Ga0335074_10330422	Not Available	1714	Open in IMG/M
3300032895\|Ga0335074_10358987	All Organisms → cellular organisms → Bacteria → Acidobacteria	1614	Open in IMG/M
3300032895\|Ga0335074_10726344	All Organisms → cellular organisms → Bacteria → Acidobacteria	949	Open in IMG/M
3300032896\|Ga0335075_11028997	All Organisms → cellular organisms → Bacteria → Acidobacteria	735	Open in IMG/M
3300032898\|Ga0335072_10049065	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → Bryobacter → Bryobacter aggregatus	5699	Open in IMG/M
3300032898\|Ga0335072_10133666	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3084	Open in IMG/M
3300032898\|Ga0335072_10238259	All Organisms → cellular organisms → Bacteria → Acidobacteria	2107	Open in IMG/M
3300032898\|Ga0335072_10290960	Not Available	1839	Open in IMG/M
3300032898\|Ga0335072_10304411	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1782	Open in IMG/M
3300032898\|Ga0335072_10702342	All Organisms → cellular organisms → Bacteria → Acidobacteria	989	Open in IMG/M
3300032898\|Ga0335072_10739045	All Organisms → cellular organisms → Bacteria → Acidobacteria	954	Open in IMG/M
3300032898\|Ga0335072_10843132	All Organisms → cellular organisms → Bacteria → Acidobacteria	868	Open in IMG/M
3300032954\|Ga0335083_10149562	Not Available	2207	Open in IMG/M
3300032954\|Ga0335083_10386409	All Organisms → cellular organisms → Bacteria → Acidobacteria	1200	Open in IMG/M
3300032955\|Ga0335076_10119504	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → Bryobacter → Bryobacter aggregatus	2557	Open in IMG/M
3300032955\|Ga0335076_10350919	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium	1361	Open in IMG/M
3300032955\|Ga0335076_10789094	All Organisms → cellular organisms → Bacteria → Acidobacteria	831	Open in IMG/M
3300033004\|Ga0335084_11323519	All Organisms → cellular organisms → Bacteria → Acidobacteria	716	Open in IMG/M
3300033134\|Ga0335073_10052746	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	5426	Open in IMG/M
3300033134\|Ga0335073_10445051	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1499	Open in IMG/M
3300033134\|Ga0335073_11009116	All Organisms → cellular organisms → Bacteria → Acidobacteria	860	Open in IMG/M
3300033134\|Ga0335073_11125814	All Organisms → cellular organisms → Bacteria → Acidobacteria	796	Open in IMG/M
3300033134\|Ga0335073_11129863	All Organisms → cellular organisms → Bacteria → Acidobacteria	794	Open in IMG/M
3300033134\|Ga0335073_11267476	All Organisms → cellular organisms → Bacteria → Acidobacteria	732	Open in IMG/M
3300033158\|Ga0335077_10163772	All Organisms → cellular organisms → Bacteria → Acidobacteria	2537	Open in IMG/M
3300033158\|Ga0335077_10890794	All Organisms → cellular organisms → Bacteria	897	Open in IMG/M
3300033158\|Ga0335077_11626028	All Organisms → cellular organisms → Bacteria → Acidobacteria	613	Open in IMG/M
3300033158\|Ga0335077_11651652	All Organisms → cellular organisms → Bacteria → Acidobacteria	607	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	98.44%
Host-Associated	Host-Associated	1.56%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	77.34%
Aquatic	Environmental → Aquatic	21.09%
Plants	Host-Associated → Plants	0.78%
Fungi	Host-Associated → Fungi	0.78%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	77.34%
Freshwater	Environmental → Aquatic → Freshwater	17.97%
Thermal Springs	Environmental → Aquatic → Thermal Springs	1.56%
Sediment	Environmental → Aquatic → Sediment	1.56%
Rhizoplane	Host-Associated → Plants → Rhizoplane	0.78%
Mycelium	Host-Associated → Fungi → Mycelium	0.78%

Habitat	Taxonomy	Distribution
Wetlands	Environmental → Terrestrial → Soil → Wetlands	50.78%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	20.31%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	17.97%
Loam	Environmental → Terrestrial → Soil → Loam	6.25%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	1.56%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.56%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.78%
Unclassified	Host-Associated → Fungi → Mycelium → Unclassified	0.78%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	50.78%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	15.62%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	14.84%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	5.47%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	4.69%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	2.34%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	1.56%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.56%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	1.56%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.78%
Unclassified	Host-Associated → Fungi → Mycelium → Unclassified → Unclassified	0.78%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	40.62%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	15.62%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	11.72%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	8.59%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	5.47%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	2.34%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	1.56%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	1.56%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	1.56%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	1.56%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	1.56%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	1.56%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	1.56%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	0.78%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	0.78%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	0.78%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.78%
Quercus Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Quercus Rhizosphere	0.78%
Attine Ant Fungus Gardens	Host-Associated → Fungi → Mycelium → Unclassified → Unclassified → Attine Ant Fungus Gardens	0.78%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000546	Quercus rhizosphere microbial communities from Sierra Nevada National Park, Granada, Spain - LJN_Illumina_Assembled	Host-Associated	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005458	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG	Environmental	Open in IMG/M
3300005534	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen07_05102014_R1	Environmental	Open in IMG/M
3300005537	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1	Environmental	Open in IMG/M
3300005538	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1	Environmental	Open in IMG/M
3300005541	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1	Environmental	Open in IMG/M
3300005542	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1	Environmental	Open in IMG/M
3300005712	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4	Environmental	Open in IMG/M
3300006052	Freshwater sediment microbial communities from North America - Little Laurel Run_MetaG_LLR_2013	Environmental	Open in IMG/M
3300007982	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPM 11 metaG	Environmental	Open in IMG/M
3300009839	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_a_PC metaG	Environmental	Open in IMG/M
3300010339	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM3	Environmental	Open in IMG/M
3300010341	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM2	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300011411	Attine ant fungus gardens microbial communities from New Jersey, USA - TSNJ017 MetaG	Host-Associated	Open in IMG/M
3300012683	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaG	Environmental	Open in IMG/M
3300014657	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_10_metaG	Environmental	Open in IMG/M
3300017822	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_2	Environmental	Open in IMG/M
3300017823	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_3	Environmental	Open in IMG/M
3300017924	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_5	Environmental	Open in IMG/M
3300017933	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_1	Environmental	Open in IMG/M
3300017943	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_4	Environmental	Open in IMG/M
3300017955	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_2	Environmental	Open in IMG/M
3300017961	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_20_MG	Environmental	Open in IMG/M
3300017972	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300017988	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin02_30_metaG	Environmental	Open in IMG/M
3300017995	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_1	Environmental	Open in IMG/M
3300018006	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_4	Environmental	Open in IMG/M
3300018007	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_5	Environmental	Open in IMG/M
3300018012	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_5	Environmental	Open in IMG/M
3300018062	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018086	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_10_MG	Environmental	Open in IMG/M
3300018088	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_10_MG	Environmental	Open in IMG/M
3300018090	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental	Open in IMG/M
3300021402	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-O	Environmental	Open in IMG/M
3300021407	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O	Environmental	Open in IMG/M
3300021474	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300022557	Paint Pots_combined assembly	Environmental	Open in IMG/M
3300025912	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300027371	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM2H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300027583	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M2 (SPAdes)	Environmental	Open in IMG/M
3300027812	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM2 (SPAdes)	Environmental	Open in IMG/M
3300027842	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027857	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027867	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027869	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027879	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4 (SPAdes)	Environmental	Open in IMG/M
3300027911	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012 (SPAdes)	Environmental	Open in IMG/M
3300027986	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen07_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300030991	Metatranscriptome of forest soil microbial communities from Montana, USA - Site 5 -Soil GP-1A (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300032770	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5	Environmental	Open in IMG/M
3300032782	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.1	Environmental	Open in IMG/M
3300032783	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.3	Environmental	Open in IMG/M
3300032805	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2	Environmental	Open in IMG/M
3300032828	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.4	Environmental	Open in IMG/M
3300032892	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5	Environmental	Open in IMG/M
3300032895	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.3	Environmental	Open in IMG/M
3300032896	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.4	Environmental	Open in IMG/M
3300032898	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.1	Environmental	Open in IMG/M
3300032954	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.2	Environmental	Open in IMG/M
3300032955	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.5	Environmental	Open in IMG/M
3300033004	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.4	Environmental	Open in IMG/M
3300033134	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.2	Environmental	Open in IMG/M
3300033158	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.1	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
LJNas_10028612	3300000546	Quercus Rhizosphere	MKHQKQIATVARLRSLHSGNGEEPIGDAFRRWIEDPIEPKTNKGSLCINPILVLLAVMAVLAGATFLFFSLGQL*
JGIcombinedJ26739_1002514872	3300002245	Forest Soil	MQPKEQIEIAARLRSFYAKDQEERFAATLRRWIEDPVRPKTDKGNLRVSPVLVWMAAIALLAGGTFLLFSLF*
Ga0066388_1005570922	3300005332	Tropical Forest Soil	MRDQGQIAIQIARLREFHAMDRREQLGEGLRRMIEDPLKPKTNKGNLRINPILVLLAVMALLAGSTFLVFSLVQL*
Ga0070681_101334462	3300005458	Corn Rhizosphere	MKITEQSDGLEMGLRKYRAADREERLEHLLRRWIEDPLKPRTRGRNLRINPILVLLAVMVLLGLGTFLFFSLVHL*
Ga0070735_1000624111	3300005534	Surface Soil	MKHKEQIAIVARLRSFRAKDQEERLVGALRRWVEDPVKPKTDKGNLRINPILVLLTAMAVLAGGTFLFFSLVQL*
Ga0070730_100200373	3300005537	Surface Soil	MKHQEQIATVARVRNCHAKDQEERLVDALQRWIEDPIKPKTDGGKLSVHPILVLLAAMALVAGGTFLFFSLVQL*
Ga0070730_100255753	3300005537	Surface Soil	MKHQEQIATVARLRICHAKDQEERLVDALQRWIEDPIKPKTDKGTLRINPILVLLAAVAVLAGGTFLFFSLVQL*
Ga0070731_101613722	3300005538	Surface Soil	VRSFHAKDQEERLVGALRRWIEDPVKPKTDKGNLSINPTLVLLTAMAVLAGGTFLFFSLVQL*
Ga0070733_101432483	3300005541	Surface Soil	MKHQEQIETVARLRSCHAQDQEEQLVDALQRWIEDPIKPKTDNGNLRINPILVLLTAMAVLAGGTFLFFSLVQL*
Ga0070733_107803701	3300005541	Surface Soil	ARLRSFCAKDQEERLVGALRRWIEDPVKPKTDKGNLRINPILVLLTAMAVLAGGTFLFFSLVQL*
Ga0070732_103159022	3300005542	Surface Soil	MKHKEQIAIVARLRSFCAKDQEERLVGALRRWIEDPIKPKTDKGNLRINPILVLLTAMAILTGGTFLFFSLVPL*
Ga0070732_105673332	3300005542	Surface Soil	MKHKEHIATVGRLRTFHPENGEERFGLALRRWIEDPIKPTDKGNLRINPILVLLTGMAVLAGGTFLFFSLVQQ*
Ga0070764_100037273	3300005712	Soil	MKRREQIATVSRLRSFHSGNGEQRLGDALQRWIEDPIKPKTDKGNLHVNPILVLLAVMTLLAGGTFLFFSLGHL*
Ga0075029_1000700602	3300006052	Watersheds	MKHQEKIAVVARLRSLHSENREERFGRALRRWIEDPLNPTTDNGNVHVHPILVLLTAMAMLAGGTFLAFCWVQL*
Ga0102924_10017623	3300007982	Iron-Sulfur Acid Spring	MKHQEQIATVARLRSFHSKNGEEPVGVALRRWIEDPITPKTDNGNLRINPILVFLAVMALLAGGTFLFFSLGEL*
Ga0116223_101633602	3300009839	Peatlands Soil	MKHQEQIATIARLRSFHSGNGKEPLGDALRRWIEDPLKPMTDKGNLRINPILVLLAMMALLAGSTFLFFSLGQR*
Ga0074046_100205383	3300010339	Bog Forest Soil	MKHQEQIAATGRLRSFHSGNGKEPLGDALRRWIEDPLRPMTAKGNLRINPILVLLAMMALLAGSTFLFFSLVQL*
Ga0074045_100550802	3300010341	Bog Forest Soil	MKHQEQIATTARLRSFHSGNVKEPLGDALRRWIEDPLRPMTDKGNLRINPILVLLAMMALLAGSTFLFFSLVQL*
Ga0126372_132961301	3300010360	Tropical Forest Soil	MRDQGQIAIQIARLREFHAMDRREQLGEGLRRMIEDPLKPKTNKGNLRINPILVLLAVMALLAGSTFLVFSLVQ
Ga0136449_1019655372	3300010379	Peatlands Soil	WSKSHVCALAMKHQEQIATVARLRSFHSRNGEEPLGDALRRWIEDPIKPKTDKGNLRTNPILVLLTAMAVLAGGTFLLFSFVQL*
Ga0153933_11386362	3300011411	Attine Ant Fungus Gardens	MKHQEQIATVTRLRSFHSRNGEEPVGVALRRWIEDPIKPKTDNGNLRINPILVCLAVMALLAGGTFLFFSLGEL*
Ga0137398_100459692	3300012683	Vadose Zone Soil	MKDKKQIAMVARLRSFHSGNGEQPLGDALRRWIEDPVKPKTNQGNLRVNPILVLLTAMAVLAGCTFLFFSMVQR*
Ga0181522_101522411	3300014657	Bog	MKHQEQIATTARLRSFHTGNGKEPLGDALRRWIEDPLKPLTDKRNLRINPILVLLAMMALLAGSTFL
Ga0187802_101492052	3300017822	Freshwater Sediment	ERFQISSSRSTGIWGWSKGGVRALAMKHKEQIAIVARLRSFRAKDQDERLVGVLRRWIEDPVKPKTDKGDLRINPILVLLTAMAVLAGGTFLFFSLVQL
Ga0187802_104217272	3300017822	Freshwater Sediment	MKHQEQIAIVARLRSFHAKDQAERLVGALRRWIEDPIKPKTDKGNLRINPILVLLTAMAILTGGTFLFFSLVPL
Ga0187818_102738912	3300017823	Freshwater Sediment	AIGVSRWSKSHVRALAMKHKEQIAIVARLRSFHAKDQEERLVDALRRWIEDPVKPKTDKGKLRVNPILVLLAAMTLLAGGTFLFFSLVQL
Ga0187818_103614552	3300017823	Freshwater Sediment	MKHEEQIATFARLHSLHAKDQEERLGGALRRWIEDPVKPKTDRGNLRVNPILVLLAAMAVLAGGTFLFFTFVPL
Ga0187818_105210642	3300017823	Freshwater Sediment	MKHKEEIATVARLRSRHAQDQEEQLVGALRRWIEDPIKPTMDNGNLRINPILVLLTAMAILAGGTFLFFSLVQL
Ga0187820_12648211	3300017924	Freshwater Sediment	MKNQEQIAAVARLCSFHARDQEERLVGALRRWIEDPIKPKTDKGNLRINPILVLLTAMAILTGGTFLFFSLVPL
Ga0187801_103307352	3300017933	Freshwater Sediment	MKHKEQFAIVARLRSFCAKDQEEWLVGALRRWIEDPVKPKTDKGNLRINPILVLLTAMAVLAGGTFLFFSLVQL
Ga0187819_100835262	3300017943	Freshwater Sediment	MKHEEQIATFARLHSLHAKDQEERLGGALRRWIEDPVKPKTDRGNLRVNPILALLAAMAVLAGGTFLFFTFVPL
Ga0187819_103186991	3300017943	Freshwater Sediment	VARLRSFHAKDQEERLVGALRRWIEDPVKPKTDKGNLRINPILVLLTAMAVLAGGTFLFFSLVQL
Ga0187819_104439222	3300017943	Freshwater Sediment	MKHQEQIAIVTRLRSFHAKDQEERLVDALRRWIEDPIKPKTDKGNLRINPILVLLTAMAILTGGTFLFFSLVPL
Ga0187817_101776311	3300017955	Freshwater Sediment	RSEIPDSRTTGIWRWSEGSVRALDMKHEEQIATFARLHSLHAKDQEERLGGALRRWIEDPVKPKTDRGNLRVNPILVLLAAMAVLAGGTFLLFTFVPL
Ga0187817_105453202	3300017955	Freshwater Sediment	MKHKEEIATVARLRSFHSRNGEERLGDTFRLWIEDPIKPKTDKGKLRVNPILVLLAAMTLLAGGTFLFFSLVQL
Ga0187817_105896742	3300017955	Freshwater Sediment	FHSERSEIPDSRTTGIWRWSEGSVRALAMKHKEKIAIVARLRSFHAKDHEEWLGDVLRCWIADPVKPRTNEGNLRINPIVILLTGMAVLAGGTFLFFSLVQQ
Ga0187778_100942553	3300017961	Tropical Peatland	MKKKEQISTVAPRLRNSYAREERLWDTLLHWIEDPLRPKTNMGNLRINPVLVLLAAMALLTLATFLFFSIVQL
Ga0187778_104273002	3300017961	Tropical Peatland	MKDREQIAALVMRLEKYHAKDREERLAPTLLRWMEDSLKPRTDNGSVRINPILVLLAVMALLAGGTFLFFSLVQL
Ga0187778_105130422	3300017961	Tropical Peatland	MKNKEQITTVAARLRNSYAREERLGDILLHWIEDPLRPKTNTGNLRINPVLVLLAAMVLLTLATFLFFSIVQL
Ga0187781_100299502	3300017972	Tropical Peatland	MADKQQITAVVMRLRNFHAANRQERLGDALLHWIEDPLRPKADKGNLRINPILVLLAAMAVLAGGTFLFFSLVQL
Ga0187781_100477822	3300017972	Tropical Peatland	MKNKEQITTVAARLRNSYAREERLLDTLRRWAEDPLKPKTNKGNLRINPILVLLAVMTLLAGCTFLFFSLVQP
Ga0181520_103828782	3300017988	Bog	MKHQEQIATTARLRSFHTGNGKEPLGDALRRWIEDPLKPLTDKRNLRINPILVLLAMMALLAGSTFLFFSWGQR
Ga0187816_101902151	3300017995	Freshwater Sediment	LDMKHEEQIATFARLHSLHAKDQEERLGGALRLWIEDPVKPKTDRGNLRVNPILVLLAAMAVLAGGTFLLFTFVPL
Ga0187816_102608431	3300017995	Freshwater Sediment	SRSTGICRRREGSVRALAMKHQEQIAIVARLRSFHAKDQAERLVGALRRWIEDPIKPKTDKGNLRINPILVLLTAMAILTGGTFLFFSLVPL
Ga0187804_100898711	3300018006	Freshwater Sediment	LRSFHAKDQEERLVDALRRWMEDPVKPKTDKGNLRINPILVLLTAMAVLAGGTFLFFSLVQL
Ga0187804_102695101	3300018006	Freshwater Sediment	PGDRAVGVQQWSKSHVRALAMKHQEQIAIVARLRSFHAKDHEEWLGDVLRCWIADPVKPRTNEGNLRINPIVILLTGMAVLAGGTFLFFSLVQQ
Ga0187805_101028523	3300018007	Freshwater Sediment	MKHKEQIAIVARLHNFCAKDQEERLVGALRRWIEDPVKPKTDKGNLRINPILVLLTAMAVLAGGTFLFFSLVQ
Ga0187805_101320051	3300018007	Freshwater Sediment	RWSEGSVRALAMKHKEQIATFARLHSLHAKDQEERLVSALRRWIEDPVKPKTDKGHLRINPILVLLAAMAVLAGGTFLFFSLVQL
Ga0187810_101668052	3300018012	Freshwater Sediment	MKHKEQLAIVARLRSFHAKDQEERLVGALRRWIEDPVKPKTDKGNLRINPILVLLTAMAVLAGGTFLFFSLVQL
Ga0187784_108405232	3300018062	Tropical Peatland	MKDKEQIAIRIARLRELYAMDRREQLGEVLLRLIEDPLRPKTDKGNLRINPILVLLAAMALLAGGTFLFFSLVQL
Ga0187769_111587742	3300018086	Tropical Peatland	MNDKEQITAVVMRLRNFHASDRQERPWDALLHWIEDPLRPKTDKGNLHINPILVLLAAMALLAGGTFLFFSLVQL
Ga0187771_100497283	3300018088	Tropical Peatland	MNDKEQITAVVVRLRNFHAVDQQERIGKALLHWIGDPLRPKTDKGNLRINPILVLLAAMALLAGGTFLFFSLVQL
Ga0187771_114685032	3300018088	Tropical Peatland	MADKEQITAVVMRLRNFHASDRQERLGDALLHWIEDPLRPKTDKGNLRINPILVLLAAMALLAGGTFLFFSLVQL
Ga0187770_100909962	3300018090	Tropical Peatland	MKNREQTSAVVTRLQNFHAVDQQERIGKALLRWIEDPLRPKTDKGNLRINPILVLLAVMVLLTGGTFLFFSFVQL
Ga0187770_104594931	3300018090	Tropical Peatland	MNDKEQITAVVVRLRNFHAVDQQERIGKALLRCIEDPLRPKTDKGNLRINPILVLLAAMALLAGGTFLF
Ga0210407_100799442	3300020579	Soil	MKHKEQIAIVARLRSFHAEDQEERLVSVLRRWIEDPIMPKTDKGTLRINPILVLLTAMAVLAGGTFLFFSLVQL
Ga0210396_100430302	3300021180	Soil	MKHKEAIDTVARLRSFHAGNGEKPLGDALRRWIEDPIKPKTDKGKLRVNPILVLLAAMTLLAGGTFLFFSLVQL
Ga0210385_111009362	3300021402	Soil	MKHKEQIAIVARLRSFCAKDQEERLVGALRRWIEDPVKPNTDKGNLRINPILVLLTAMAVLAGGTFLFFSLVQL
Ga0210383_100887262	3300021407	Soil	MKHKEQIAIVARLRSFCAKDQEEWLVGALRRWIEDPVKPKTDKGNLRINPILVLLTAMAALAGGTFLFFSLVQL
Ga0210390_109583041	3300021474	Soil	ARLRSFHSGNGKEPLGEALRRWIEDPLKPMTDKGNLRINPILVLLAMMALLAGSTFLFFSLGQL
Ga0210409_100660543	3300021559	Soil	MKHKEAIDTVARLRSFHAGNGEEPLGDALRRWIEDPIKPKTDKGKLRVNPILVLLAAMTLLAGGTFLFFSLVQL
Ga0212123_1000009971	3300022557	Iron-Sulfur Acid Spring	MKHQEQIATVARLRSFHSKNGEEPVGVALRRWIEDPITPKTDNGNLRINPILVFLAVMALLAGGTFLFFSLGEL
Ga0207707_101232042	3300025912	Corn Rhizosphere	MKITEQSDGLEMGLRKYRAADREERLEHLLRRWIEDPLKPRTRGRNLRINPILVLLAVMVLLGLGTFLFFSLVHL
Ga0209418_10879002	3300027371	Forest Soil	MKHQEQIAIVARLRSFHAKDQAERLVGSLRRWIEDPIKPKTDKGNLRINPILVLLTAMAILTGGTFLFFSLVPL
Ga0209527_11033462	3300027583	Forest Soil	MQPKEQIEIAARLRSFYAKDQEERFAATLRRWIEDPVRPKTDKGNLRVSPVLVWMAAIALLAGGTFLLFSLF
Ga0209656_102443862	3300027812	Bog Forest Soil	MKHQEQIATTARLRSFHSGNVKEPLGDALRRWIEDPLRPMTDKGNLRINPILVLLAMMALLAGSTFLFFSLVQL
Ga0209580_104293302	3300027842	Surface Soil	MKHKEHIATVGRLRTFHPENGEERFGLALRRWIEDPIKPTDKGNLRINPILVLLTAMAVLAGGTFLFFSLVQL
Ga0209166_1000019094	3300027857	Surface Soil	MKHQEQIATVARLRICHAKDQEERLVDALQRWIEDPIKPKTDKGTLRINPILVLLAAVAVLAGGTFLFFSLVQL
Ga0209166_1000072335	3300027857	Surface Soil	MKHQEQIATVARVRNCHAKDQEERLVDALQRWIEDPIKPKTDGGKLSVHPILVLLAAMALVAGGTFLFFSLVQL
Ga0209167_100425102	3300027867	Surface Soil	MKHQEQIETVARLRSCHAQDQEEQLVDALQRWIEDPIKPKTDNGNLRINPILVLLTAMAVLAGGTFLFFSLVQL
Ga0209167_101917342	3300027867	Surface Soil	MKYKEQIAIVARLRSFCAKDQEERLVGALRRWIEDPVKPKTDKGNLRINPILVLLTAMAVLAGGTFLFFSLVQL
Ga0209579_101030932	3300027869	Surface Soil	VRSFHAKDQEERLVGALRRWIEDPVKPKTDKGNLSINPTLVLLTAMAVLAGGTFLFFSLVQL
Ga0209169_100612882	3300027879	Soil	MKRREQIATVSRLRSFHSGNGEQRLGDALQRWIEDPIKPKTDKGNLHVNPILVLLAVMTLLAGGTFLFFSLGHL
Ga0209698_100059748	3300027911	Watersheds	MKHQEKIAVVARLRSLHSENREERFGRALRRWIEDPLNPTTDNGNVHVHPILVLLTAMAMLAGGTFLAFCWVQL
Ga0209168_100117853	3300027986	Surface Soil	MKHKEQIAIVARLRSFRAKDQEERLVGALRRWVEDPVKPKTDKGNLRINPILVLLTAMAVLAGGTFLFFSLVQL
Ga0073994_123965472	3300030991	Soil	MKHKEQIATVARLRSFHAKDQEERLGGALRPWIADPVKPKTDRGNLRVNPILVLLTAMAVLAGATFLFFSLVQL
Ga0335085_1000533013	3300032770	Soil	MQIARLREFHAMDRREQLGEGLRRMIEDPLKPKTNKGNLRINPILVLLAVMALLAGATFLFFSLVQL
Ga0335085_101246523	3300032770	Soil	MKHKEQIAIVARLRSFCAKDQEERLVGALRRWIEDPVKPKTDKGNLRINPILVLLTAMAVLAGGTFLFFSLVQL
Ga0335085_102594242	3300032770	Soil	MKHQEQIAIVARLRSFHAKDQAERLVGALRRWIEDPIKPKTDKGNLRINPILVLLTAMAILTGGTFLLFSLVPL
Ga0335085_103498412	3300032770	Soil	MKHQEQIAIVARLRSFHAKDQAERLVGVLRRWIEDPIKPKTDKGNLRIKPILVLLTAMAILTGGTFLFFSSVPL
Ga0335082_101082321	3300032782	Soil	RSTGICRRREGSVRALAMKHQEQIAIVARLRSFHAKDQAERLVGALRRWIEDPIKPKTDKGNLRINPILVLLTAMAILTGGTFLFFSLVPL
Ga0335079_103423311	3300032783	Soil	ISGSRSTGICRRREGSVRALAMKHQEQIAIVARLRSFHAKDQAERLVGALRRWIEDPIKPKTDKGNLRINPILVLLTAMAILTGGTFLFFSLVPL
Ga0335079_104061152	3300032783	Soil	MKHKEQIATVARLRSFCAKDQEERLVGALRRWIEDPVKPKTDKGNLRINPILVLLTAMAVLAGGTFLFFSLVQL
Ga0335079_114221392	3300032783	Soil	MKNREQTTAEVTRLRDFLAVDQQERIGKALLRSIEDPLRPKTDKGNLRINPILVLVAAMALLAGGTFLFFSLVQL
Ga0335078_100685022	3300032805	Soil	MKNREQTTAEVTRLRDFLAVDQQERIGKALLRSIEDPLRPKTDRGNLRINPILVLVAAMALLAGGTSLFFSLVQL
Ga0335078_103010302	3300032805	Soil	MKHKEQIAIVARLRSFRAKDQEERLVGALRRWIEDPVKPKTDKRNLRINPILVLLTVMAVLAGGTFLFFSLVQL
Ga0335078_103983533	3300032805	Soil	MNDKEQITAVVMRLRDFHAVDQQERIGAALLRSIEDPLRPKTDKGNLRINPILVPPTAMALLAGGTFVFFSLVHL
Ga0335078_104173782	3300032805	Soil	CHSERSEISGSRSTGIWRWCEGGVRALAMKHKEQIAIVARLRSFCAKDQEERLVGALRRWIEDPVKPKTDKRNLRINPILVLLTAMAVLAGGTFLFFSLVQL
Ga0335078_107554012	3300032805	Soil	MKHQEQIATTARLRSFHSGNGKEPLREALRRWIEDPLKPTTDKGNLRINPILVLLAMMALLAGSTFLFFSLGQL
Ga0335078_111176492	3300032805	Soil	NDTGGGCHSEGLEISGSRSTGIWRWCEGGVRALAMKHKEQIAIVARLRSFHAKDQEERLVGALRRWIEDPVKPKTDKGNLRINPILVLLTAMAVMAGGTFLFFSLVQL
Ga0335078_115676092	3300032805	Soil	SRSTGIWRWCEGGVRALAMKHKEQIATVARLRSFCAKDQEERLVGALRRWIEDPVKPKTDKGNLRINPILVLLTAMAVLAGGTFLFFSLVQL
Ga0335078_118305421	3300032805	Soil	IATVARLRSFCAKDQEEWLVGALRRWIEDPVKPKTDKGNLRINPILVLLTAMAVLAGGTFLFFSLVQL
Ga0335078_123260872	3300032805	Soil	MNDKEQITAVVGRLRSFHVANRHERLGDALLHWIEDPLRPKTDKGNLRINPILVLLAVMALLAGSTFLFFSLVQL
Ga0335080_109569162	3300032828	Soil	MKHQEQIATTARLRSFHSGNGKEPLGEALRRWIEDPLKPTTDKGNLRINPILVLLAMMALLAGSTFLFFSLGQL
Ga0335080_118139862	3300032828	Soil	VARLRSFCAKDQEERLVGALRRWIEDPVKPKTDKRNLRINPILVLLTAMAVLAGGTFLFFSLVQL
Ga0335081_100550258	3300032892	Soil	GCHSEGLEISGSRSTGIWRWCEGGVRALAMKHKEQIATVARLRSFCAKDQEERLVGALRRWIEDPVKPKTDKGNLRINPILVLLTAMAVLAGGTFLFFSLVQL
Ga0335081_105268792	3300032892	Soil	MKHKEQIAIVARLRSFHAKDQEERLVGALRRWIEDPVKPKTDKGNLRINPILVLLTAMAVMAGGTFLFFSLVQL
Ga0335074_100877253	3300032895	Soil	MKHKEQIATVARLRSFCAKDQEEWLVGALRRWIEDPVKPKTDKGNLRINPILVLLTAMAVLAGGTFLFFSLVQL
Ga0335074_101772163	3300032895	Soil	MKHKEQIGIVARLRSFHAKDQEERLVDALRRWIEDPVRPKTDKGNLRIDPILVLLTAMVVLAGGTFLFFSLVQL
Ga0335074_102407272	3300032895	Soil	MKHQEQIAIVARLRSLHAKDQAERLVGALRRWIEDPIKPKTDKGNLRINPILVLLTAMAILTGGTFLFFSLVPL
Ga0335074_103304222	3300032895	Soil	TGIWRWCEGGVRALAMKHKEQIAIVKRLRSFCAKDQEERLVGALRRWIEDPVKPKTDKGNLRINPILVLLTAMAVLAGGTFLFFSLVQL
Ga0335074_103589872	3300032895	Soil	MKHKEQIAIVARLRSFCAKDQEERLAGALRRWIEDPVKPKTDNGNLRINPILVLLTAMAVLAGGTFLFFSLVQL
Ga0335074_107263441	3300032895	Soil	MKHQEQIATTARLRSFHSGNGKEPLGEALRRWIEDPLKPMTDKGNLRINPILVLLAMMALLAGS
Ga0335075_110289971	3300032896	Soil	KHKEQIAIVARLRSFCAKDQEERLVGALRRWIEDPVKPKTDKGNLRINPILVLLTAMAVLAGGTFLFFSLVQL
Ga0335072_100490654	3300032898	Soil	MVDKEQITAVVTRLRGFHAVDQQDRIGKALLRWIEDPLRPKTDKGNLRINPTLVLLAGMALLAAGTFLFFSLVQL
Ga0335072_101336662	3300032898	Soil	MKHKEQIATVARSRSFCAKDQEEWLVGALRRWIEDPVKPKTDKGNLRINPILVLLTAMAVLAGGTFLFFSLVQL
Ga0335072_102382593	3300032898	Soil	MKHQEQIATTARLRSFHSGNGKEPLREALRRWIEDPLKPTTDKGNLRINPILVLLAMMALLAGSTFLFFSLGQR
Ga0335072_102909601	3300032898	Soil	GIWRWCEGGVRALAMKHKEQIAIVARLRSFCAKDQEERLVGALRRWIEDPVKPKTDKGNLRINPILVLLTAMAVLAGGTFLFFSLVQL
Ga0335072_103044111	3300032898	Soil	MKHQEQIAIVARLRSFHAKDQAERLVGALRRWIEDPIKPKTDKGNLRINPILVLLTAMAILTGG
Ga0335072_107023422	3300032898	Soil	EISGSRSTGIWRWCEGGVRALAMKHKEQIAIVARLRSFCAKDQEERLVGALRRWIEDPVKPKTDKRNLRINPILVLLTAMAVLAGGTFLYFSLVQL
Ga0335072_107390452	3300032898	Soil	SVRALAMKHQEQIAIVTRLRSFHAKDQEERLVGALRRWIEDPIKPKTDKGNLRINPILVLLTAMAILTGGTFLFFSLVPL
Ga0335072_108431322	3300032898	Soil	RSFCAKDQEERLVGALRRWIEDPVKPKTDKGNLRINPILVLLTAMAVLAGGTFLFFSLVQ
Ga0335083_101495621	3300032954	Soil	AMKHKEQIAIVARLRSFCAKDQEERLVGALRRWIEDPVKPKTDKRNLRINPVLVLLTAMAVLAGGTFLFFSLVQL
Ga0335083_103864092	3300032954	Soil	MKDQEQIATTARLRGFHSGIGKEPLGEALRRWIEDPLKPMTDKGNLRINPILVLLAMMALLAGSTFLFFSLGQL
Ga0335076_101195042	3300032955	Soil	MKHKEQIAIVARLRSLHAKDQEERLVGALRRWIEDPVKPKTDKGNLRINPILVLLTAMAVMAGGTFLFFSLVQL
Ga0335076_103509192	3300032955	Soil	MKHKEQIAIVARLRSFCAKDQEERLVGALRRWIEDPVKPKTDKRNLRINPILVLLTAMAVLAGGTFLFFSLVQL
Ga0335076_107890941	3300032955	Soil	RALAMKHKEQIATVARLRSFCAKDQEEWLVGALRRWIEDPVKPKTDKGNLRINPILVLLTAMAVLAGGTFLFFSLVQL
Ga0335084_113235191	3300033004	Soil	ISGSRSTGICRRREGSVRALAMKHQEQIAIVARLRSFHAKDQAERLVGVLRRWIEDPIKPKTDKGNLRIKPILVLLTAMAILTGGTFLFFSSVPL
Ga0335073_100527462	3300033134	Soil	MKHQEQIAIVTRLRSFHAKDQEERLVGALRRWIEDPIKPKTDKGNLRINPILVLLTAMAILTGGTFLFFSLVPL
Ga0335073_104450513	3300033134	Soil	MKHKEQIAIVARLRSFRAKDQEERLVGALRRWFEDPVKPNTDKGNLRINPILVLLTAMAVLAGGTFLFFS
Ga0335073_110091162	3300033134	Soil	MSGSRSTGICRRREGSVRALAMKHQEQIAIVARLRSFHAKDQAERLVGALRRWIEDPIKPKTDKGNLRINPILVLLTAMAILTGGTFLFFSLVPL
Ga0335073_111258142	3300033134	Soil	SFHAKDQAERLVGALRRWIEDPIKPKTDKGNLRINPILVLLTGMAILTGGTFLFFSLVPL
Ga0335073_111298632	3300033134	Soil	MKHQEQIAIVARLRSFHAKDQAERLVGALRRWIEDPIKPKTDKGNLRINPILVLLTAMAI
Ga0335073_112674762	3300033134	Soil	MKHKEQIAIVARLRSFHAKDQEERLVGALRRWIEDPVKPKTDKGNLRINPILVLLTAMAVLAGGTFLFFSLVQL
Ga0335077_101637723	3300033158	Soil	MKHKEQIAIVARLRSFCAKDQEERLVGALRRWIEDPVKPKTDKRNLRINPILVLLTAMAALAGGTFLFFSLVQL
Ga0335077_108907942	3300033158	Soil	ARLRSFHAANRQERFGDALLRWIEDPLKPKTDKGSLRINPIVILLTIIALLAGGTFLFLSFVQL
Ga0335077_116260282	3300033158	Soil	RLHSFCAKDQEERLVGALRRWIEDPVKPKTDKGNLRINPILVLLTAMAVLAGGTFLFFSLVQL
Ga0335077_116516522	3300033158	Soil	MKHQEQIAIVTRLRSFHAKDQEERLVGALRRWIEDPIKPKTDKGNLRINPILVLLTAMAILTGG

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F064394

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences