NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome Family F064270

Metagenome Family F064270

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F064270
Family Type Metagenome
Number of Sequences 128
Average Sequence Length 82 residues
Representative Sequence MLVAGEAQRRRGLGRIQGHLRVPLIKATLLTYFTRALLDSRVLAVGNGGAAALRGVTPADLGNGDAVELHAEHQ
Number of Associated Samples 3
Number of Associated Scaffolds 128

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 0.00 %
% of genes near scaffold ends (potentially truncated) 0.00 %
% of genes from short scaffolds (< 2000 bps) 0.00 %
Associated GOLD sequencing projects 3
AlphaFold2 3D model prediction Yes
3D model pTM-score0.22

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Unclassified (100.000 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Host-Associated → Plants → Roots → Unclassified → Unclassified → Root
(98.438 % of family members)
Environment Ontology (ENVO) Unclassified
(100.000 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(100.000 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 14.71%    β-sheet: 0.00%    Coil/Unstructured: 85.29%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.22
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 128 Family Scaffolds
PF13952DUF4216 0.78
PF00385Chromo 0.78
PF00078RVT_1 0.78
PF03732Retrotrans_gag 0.78
PF08284RVP_2 0.78



 ⦗Top⦘

Phylogeny

NCBI Taxonomy

NameRankTaxonomyDistribution
UnclassifiedrootN/A100.00 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link



 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
RootHost-Associated → Plants → Roots → Unclassified → Unclassified → Root98.44%
RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere1.56%

Visualization
Powered by ApexCharts



Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300014486Endophyte microbial communities from Sorghum bicolor roots, Mead, Nebraska, USA - 072115-40_1 MetaGHost-AssociatedOpen in IMG/M
3300015261Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-104_1 MetaGHost-AssociatedOpen in IMG/M
3300015262Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaGHost-AssociatedOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
Ga0182004_10009153113300014486RootVGSADTRDPRDRETETGETLVAGETRRRRGLGRIKGHLRVPLLKANSLTYFTRALLDPRVLAVANGGAVVLRGVMPANLGNCDAGEVEDEQE*
Ga0182004_1001478063300014486RootVGSADTRDPRDSETESRDELVAGETRRRRGLGRNQGHLRVPLLKADSLTYFTRALLDPRVLAVANGGAAVLHGVMPANLGNGDAVEVADEQERLKAKL*
Ga0182004_1001508033300014486RootVGSTDTRDPCDRETKTGEMLVAGETRRRRGLGRIKGHLRVPLLKANSLTYFPRALLDPRVLAVANCGAALRRDVTPANLGNSDAVEVVDEHE*
Ga0182004_1001905383300014486RootVADRWDPLTHGTHAIERQRETLVAGETRRWRGLGRIQGHPRVPLLKANSLTYFTCSLLDPRVLAVTNGGVAVLRGVTPANLGNGDAVEVVDEQE*
Ga0182004_1002292953300014486RootMLVAGETRRQRGLGRIQGHLCVHLLKATLLTYFTRALLDPRVLAVANGGAAVLRGVMPANLGNGDAVEVADDQE*
Ga0182004_1003088523300014486RootVGSADRGDPRDRETETGEKLVAGETRRRRGLGRIQGHLCVPNLKANSLTYFTLALLAPRVLAVANGGAAVLRGVTPANLGNGDAVEVADEQEKLKAKL*
Ga0182004_1003522613300014486RootMLVAGEAQRRRGLGRIQRHLRVPLIKATRLTYFTHALLDSRVLAVGNGGAAAVRGVTPADPGIGDAVELHAEHQ*
Ga0182004_1003613313300014486RootMLVAGEAQRRRGLGRIQGHLRVRLIKATLLTYFTRALLDSRVLAVENGGAAALRGVTPADLGNGDAVELHAEHQ*
Ga0182004_1004301123300014486RootVGSADPRDPRDSETENRDELVVGETRRRRGLGRIQGYLRVPLLKANSLTYFTRAVLDPRVLAVANGGAAVLHGVTPANLGNGDAVEVADEQE*
Ga0182004_1004493023300014486RootMLVAGEAQRRRGLGRIQGHLRVPLIKVTLLTYFTRALLDSRVLAIENGGAAALRDVTPADLGNGDAVELHAEH*
Ga0182004_1004712313300014486RootMLVAGEGQRRRGLGRIQGHLRVPLINATLLTYFTRALLDPKVLAVGNGGAAALRGMTTADRGIGDAVEVADEQERLKAKL*
Ga0182004_1004776013300014486RootM*EGETDTWDPRDRETETGETLVAGETRRRRGLGRIQGHLRVPLLKATLLTYFTRALLDPRVLAVGNGVAAVLRGVTPADLGNGDAIELHAEHQ*AKGKR*
Ga0182004_1004965933300014486RootVGSADTRDPRDRETESRDELVVGETRRRRGLCRIQGHLRVPLLKANSLTYFTRALLDPRVLAVANDGAAVLRDVTPTNLGNGDAVEVADEQE*
Ga0182004_1005412313300014486RootRRRRGLGRIQGHLRVPLLKANSLTYFTRALLDPRVLTVANGRAAVLRGVTPANLGNGDAVEVADE*
Ga0182004_1005445513300014486RootVGSADTRDPRDRETESRDELVAGETRRRRGLGRIQGHLRVSLLKANSLTYFTRALLGLRVLAVANGGATVLRGVTPANLGNGDVVEVVDEQERLKVKP*
Ga0182004_1005548733300014486RootVGSADTRDPRDRETKTGETLVAGETRRWRGLGRIQGHLRVPLLKVNSLTYFTRALLNSRVLAVANGGAAVLRGVTPANLGNGDTVQIADEQE*
Ga0182004_1005620923300014486RootVGSADTRDPRDRETESRNELVAGENRRRRGLGQIQGHLRVPLLQANSLTYFTRALLDPRVLAVANGGAALLRGVTSANLGNGDTVEVADEQE*
Ga0182004_1005797623300014486RootMARLGRIQGHLRVPLLKADSLTYFTRALLDPRVLAIANGGATVLHGVTPVNIGNGDAVEVADEQERLKAKL*
Ga0182004_1005841433300014486RootMLVAGEAQRRRGLGRIQGHLRIPLIKETLLTYFTRALLDPKVLAVGNGGAAALRGVTPTDPGNGDAVEVADEQERLKAKL*
Ga0182004_1005861313300014486RootVGSADTQDPRDRETESRDELVVDETLRRRGLGRIQGHLRVPLLKANSLTYFTRALLDPRVLTVANGGAAVLRGVTPANLGNGDAVEVAHEQE*
Ga0182004_1005889233300014486RootVGSADTRDPRDRETETGEKVVAGETRQRRGLGRIQGHLRVPLLNTNSLTYFTRALPDPRVLAVANGGAAVLRGVTPANLDNDDAVEVADEQERPKVKL*
Ga0182004_1005956233300014486RootVREGLTGGPTGQRDPLDSDTETGETLVAGETRRRRGLGRIQGHLRVPLFKANSLTYFTRALLDPRVLAVTNDGAAVLRGVTPANLGNDDVVEVADEQERLHAKL*
Ga0182004_1006341333300014486RootMGDARRRIQGHLRVPLTKATLLTYFTRALLDPRVLAVGNGGAAALRGVTPADPGNGDAVDVADEQEWVKAKL*
Ga0182004_1006464223300014486RootMLVAGKAQRRRGLHRIQGHLRVPLIKATLLTYFTRALLDSRVLAVGNGGATALRGVTSADLGNGDAVELHAEHQ*
Ga0182004_1006588013300014486RootIQGHLRVPLTKATLLTYFTRALLDSRVLAVGNGGAAALRGVTPADPGNGDVVEVADEQERLKAKL*
Ga0182004_1006819613300014486RootMLVASEAQRRRGLGRIQGHLRVPLIKATLLTYFTRALLDSRVLAIGNGGAAALRGVAPADPGNSDVVELHAEHQ*
Ga0182004_1006835133300014486RootMLVAGKAQRRRGLGRIQGHLRVPLIKATLLTYFTRTLVDSRVLAVGNGGAAALRGVTPADPGNGDVVELHAEHL*
Ga0182004_1007171523300014486RootVTGEKLAAGKAQRRRGFRWIQGHLRVPLIKATLLTYFTRTLLDPMVLAVGNGGAAALRGVTPADPGNGDVVELHAEHQ*
Ga0182004_1007177513300014486RootVTGEKLAAGKAQRRRGFRWIQGHLRVPLIKATLLTYFTRALLDPKMLAVGNGGAAALRGVTPADLGNGDAVELADEQERLMAKL*
Ga0182004_1007308523300014486RootMLVAGEAQRRRGLSRIQGHLRVPLIKVTLLTYFTRAVLDPRVLAVGNGGVAALRGVTPADPGNGDAVELHAEHQ*
Ga0182004_1007477113300014486RootVTGEKLVAGKAQRQRGLRRIQGHLRVPLIKATLLTYFTRALLDPKVLAVGYGGAAALRGGTPADPGNGDMVEVHAEHQ*
Ga0182004_1007565323300014486RootVGSADTRDPRDRETETGVTLVAVETRRRRGLGRIQGHLRVPLLKANSLTYFTRALLDPRVLAVANGGAAVLRGVTPANLGNGDAVEVADEHE*
Ga0182004_1007574213300014486RootM*EGETDTRDPRDRETETGETLVAGET*RRRGLGRVQGHLHVPLIKATRLTYFTRALLDPRVLAVGNGGAAVLRGVTPADLGNGDAVELH
Ga0182004_1007581913300014486RootMLVAGEAQRRRGLGRIQGHLRVPLIKATLLTYFTRALLDPRVLAVGNGGAEALRGVTLADPSNGDAVELHAEHQRTKGKR*
Ga0182004_1007607813300014486RootVGSADTRDPRDRGTETGEKLVAGESRRRRGLRWIKGHLRVTLLKATPLTYFTRALLDPRVLAVANGGAAVLRGVTPANLGNGDAVELADEQERLKTKL*
Ga0182004_1007778813300014486RootMIVAGEAQRRRGLGRIQGHLRDPLIKATLLTYFTRALLDPRVLAVGNGGAAALRGVTPADPGNGDAVE
Ga0182004_1007806723300014486RootGLGRIQGHLRVPLIKATLLTYFTRALLDSRVLAVGNGGAAVLHGVTPANLGFGDAVEVADEQERLKAKLQEE*
Ga0182004_1007815223300014486RootIQGHLRVPLLKATLLTYFTRALLDHRVLAVTNGGAAALRGVMPANLGNGDTVEVADEQERLKAKL*
Ga0182004_1007857123300014486RootETETGEMLVAGEAQRRRGLGRIQGHLRVPLIKATLLTYFTHALLDSRVLAVGNGGAATLRGVMPADPGNGDAVELHAEHQ*
Ga0182004_1007952223300014486RootMLAAGKAQRRRGLRRIQGHLRVPLIKATLLTYITRALLDPKVHAVGNGGAAALPGVTPADPGNGDAVELHAEHQ*
Ga0182004_1007988313300014486RootMLVAGKAQRRRALRWIQGHLRVSLIKATLLTYFTRALLDSRVLAVGNGGAAALRGVTPADLGNGDAVELHAEHQ*
Ga0182004_1008005323300014486RootRETETGETLVAGETRRRRGLGRIQGHLRVPLLKATLLTYFSHALLDPRVLAVGNGGAAVLRGVTPADLGNGDAVELHAEHQ*
Ga0182004_1008152623300014486RootMLVAGEAQRRRGLGRIQGHLRVPLTKATLLTYFTPALLDSRVLAVGNGGAAALRGVTPADPGNGDAVEVADEQERLKAKL*
Ga0182004_1008186413300014486RootTRDPRDRETETGETLVAGETRRRRGLGQIQGHLRVPLLKANSLTYFTCSLLDPRVLAVANGGAAVLRGVTPANLGNGNTVEVADEQE*
Ga0182004_1008195613300014486RootMLVTGKAQRRRGLRRIQERLRVPLIKATLLAYVTCALLDSSVLAFGNGGAAALRDVTPADPGNGDAVEVVDEQERLKAKL*
Ga0182004_1008229213300014486RootVGSADKRDPRDRGTETGEKLVARGTRRRRGFRWIQGHLRVPLLKATPLTYFTRALLDPRVLAVANGGAAVLRGVTPADLGNGDVVELAE*
Ga0182004_1008327923300014486RootVGSADTRDPRDRETETGETLVAGETRRRRGLGRIQGHLRVPLLKTDSVTYFTRALLDPRVLAVVNGGAAVLRGVTPANLGIGDAVEVADEQERLKAKL*
Ga0182004_1008424213300014486RootMLIAGEAQRRRGLGRIQGHLRVPLIKATLLTYFTRALLDSRVLAVGNGGAAALRDVTPADLGNGDVVELHAEHQ*
Ga0182004_1008437223300014486RootVTGEKLAAGKAQRRRGFRRIQGHLRVPLIKATLLTYFTRALLDPKVLAVGNGGAAALRGVTPADLGNGDAVELADEQERLMAKI*
Ga0182004_1008629913300014486RootVGSADTRDPCDRGIETGEKLVADGTRRRRGLRWIQGHLHVPLLKATPLTYFTRALLDPRVPAVANGGVAVLRGVTPTNLGNGDAVELADEQSRLKTKL*
Ga0182004_1008636513300014486RootMLVAGEAQRRGGLGRIQGHLRVPLIKATRLTYFTRALQDSRVLAVGNGGAAALRGVTPADPGNGDAVELHAEHQ*
Ga0182004_1008716113300014486RootVGERLTGGPTVQRDPLDSNTETGEKLVAGKTRRRRGLRGNQGHLRVPLLKANSLTYFTRALLDPRVLAVANGGAAVRRGVTPANLGNDDAVEVADEQE*
Ga0182004_1008846313300014486RootVGSADTRDPRDRETETGEKLVAGETRRRRGLRWIQGHLRVPLLKANPLTYFTRALLDPRVLAVANGGAAVLHSVTPANLGNGDAVEVADEQERLKAKL*
Ga0182004_1008913913300014486RootVTGEKLAAGKAQRRRGLHRIQWHLRVPLIKATLLTYVTRALLDPKVLAIGNGGAAALRGGTPVDPGNGDAVEVVNEHERLKAKL*
Ga0182004_1009157313300014486RootVGSADTRDPRDRGIETGEKLVAGGTRRRRGLRWIQGHLRVPLLNATPLTYSTRALLDPRVLAVVNGGVAVLCGVTPANLGNGDAVELADEQ*
Ga0182004_1009193413300014486RootMLAAGKAQRRQGLRRIQGHLRVPLIKATLLTYITRALLDPKVLAVGNGRAAALRGITPADPGNGDAVELHAEHQ*
Ga0182004_1009605713300014486RootMLVTGKAQRRRGLGRIQGHLRVPLIKATLLTYFTRSLLDSRVLAVANGGSAVLREVTPADLGNGDTVELADKQERLKAKL*
Ga0182004_1009609023300014486RootETLVAGETRRRRGLDRIQGHLHVPLLKATLLTYFTRALLDSRVLAVVNGGAAVLCGVTPANLGNGDTVEVADEQE*
Ga0182004_1009619223300014486RootMLAAGKAQRRRGLCRIQGHLRVPLIKATLLTYFTRSLLDPKVFAVGNGGAAALRGVTPADPGNGDAVDLHAEHQ*
Ga0182004_1009642313300014486RootMLVAGEAQRRRGLGRIQGHLCVPLIKATLLTYFTRALLDSRVLAVGNGGAAVLHGVTPTNLGFDDAVEVADEQERLKAKL*
Ga0182004_1009643413300014486RootVTGELLVAGKAQRRRGLHRIQGHLRVSLIKATLLTYFTRALLDPKVLAVGNGGAAALRGVTPADPGN
Ga0182004_1009777413300014486RootGEMLVAGEAQRRRGLGRIQGHLRVPLIKATLLTYFTRALLDPRVLAVGNGGAAALRGVTPADLGNGDAVELHAEHQE*
Ga0182004_1010072513300014486RootTRDPRVRETEAGEMLVAGEAQRRRGLGRIQGHLRVPLIQANSATYFTRALLNPRVFAVGNGGAAALRGVTPADPGNGNAVELVDEQERLKAKL*
Ga0182004_1010141813300014486RootVNQRGWHREADTWDPRVSETEAGELLVAGEAQRRRGLGRIQGNLRVPLIKATLLTYFTRALLDPKVLAVGNGRAAALRGVTPADLGNGDAVELADEQEWLKAKL*
Ga0182004_1010202113300014486RootVTGEKLAAGKAQRRRGLHRIQGHLRVPLIKATLLTYFTRALLDSRVLAVENGRAAALRGVTPADLGNGDAVELADEQERLKAKL*
Ga0182004_1010434923300014486RootMTGEKLAAGKAQRRRGFCWIQGHLRVPLIKATLLTYFTRALLDPMVLAVGNGGAAALRGVTPADPGNGDAVELHTEHQ*
Ga0182004_1010559913300014486RootMLVAGEAQRRRGLGRIQGHLRVPLIKATLLTYFTRALLDSRVLAVGNGGAAALRGVTPADLGNGDAVELHAEHQ*
Ga0182004_1010761113300014486RootRIQGHLRVPLIKADSVTYFTRALRDPRVLAVGNGGSAALRGITPTDLGNGDAVELADEQE
Ga0182004_1010833913300014486RootMLVAGEAQRRRGLGRIQGHLRVPLIKATLLTYFTRALLDSRVLAVGNGGAAVLHGVTPANLGIGDAVEVADEQEWLKAKL*
Ga0182004_1010926213300014486RootVNQRGERGEADTRDPRVSETVTGEKLVAGEAQRRRGLGRIQGHLRVPLITATLLTYFTRALLDSRVLAVRNGGAAALRGVTPADLGNGDAVELADEQERL*
Ga0182004_1011051513300014486RootVGSADTWDPCDRETETGETLVAGETRRLRGLGRIQGHLRVPLLKANPLTYFTRALLDPRVLTIANGGAAVLRGVTPANLGNGDAVEVADEQE*
Ga0182004_1011313513300014486RootRRRRGLGRIQGHLRVPLLKANSLTYFTRALLDPRVLTVANGGAAVLHGVTPANLGNGDTVEVADEQE*
Ga0182004_1011402323300014486RootMLVADKAQRRRGLRRIQGHLRVPLTKATLLTYFTRALLDSRVLTVGNGGAAALRGVTPADPGNGDAVEVADEQEWVKAKL*
Ga0182004_1011503913300014486RootVGSADTWDPRDSETESRDELVVSETRRRRGLGRIQGHLRVPLLKANLLTYFTRALLDPKVLAVTNGGAAVLRGVTPANLGNGDAVEVADEQERLKAKL*
Ga0182004_1011877613300014486RootVNQGENGEAETRDPRVSETEAEEMLVAGEAQRRRGLGQIQGHLRVPLIKATLLTYFTSALLDSRVLAVGNGGAAALRGGTPADPGNGDAVEVADEQEQLKAKL*
Ga0182004_1012093713300014486RootRRIQGHLRVPLIKATLLTYFTRALLDSRVLAVGNGGAAALHGVTPADLGNGDAVELADEQERLKAKL*
Ga0182004_1012157413300014486RootMLVAGEAQRRRGLGRIQGHLRVPLIKATPLTYFTRALLDSRVLAVGNGGAAALRGVTPADPGNGDAVEVADEHEQLKAKL*
Ga0182004_1012285923300014486RootAGEAQRRRGLGRIQGHLRVPLIKATLLTYFTRALLDSRVLAVGNGGAAALRGGTPADPGNGDAVEVADEQERLEAKL*
Ga0182004_1012475523300014486RootMLVAGEAQRRRGLGRIQGHLRVPPIKATLLTYFTHALLDSKVVAVGNGGAAALHGVTPADPGNGDAVELADEQERPKAKL*
Ga0182004_1012502923300014486RootMLVAGEAQRRRGLGWIQGHLRVPLIKTTLLTYFTRALVDSRVLAVGNGEAAALRGVTPADPGNGDVVVLHAEHQ*
Ga0182004_1012751523300014486RootMLIAGEAQRRRGLGRIQGHLRVPLIKVTLLTYFTHALLDSRVLAVGNGGAAALRGITPADPGNGDAVELHAEHQ*
Ga0182004_1012857123300014486RootMLVAGEARRRQGLGRIQGHLRVPPIKATLLTYFTRALLDSKVLAVGNGGAAALRGVTPADLGNGDAVELADEQERPKAKL*
Ga0182004_1012872813300014486RootVGSADTRDPRDRETETGETLVAGETRRRRGLGRIQGHLRVPLLKANPLTYFTRALLDPNVLAVANGGAAVLRGVTPANLGNGDAVEVADEQE*
Ga0182004_1012897413300014486RootMQGQLRVPLIKADSVTYFTRALRDPRVLAVRNGGSAALRGVTSADLGNSDVVELADEQERLKAKL*
Ga0182004_1012905713300014486RootMLVAGEAQRRQGLGRIQGHLRVPLIKATLLTYFTRALLDSRVLAVGNGGAVVLHGVTPANLGFGDAVEVADEQEWLKVKL*
Ga0182004_1013445013300014486RootAEEMLVAGEAQRRRGLGRIQGHLRVPLIKATLLTYFTRALLDPKVLAVGNGGAAALRGGTSVDPGNSDAVEVANEQKRLRAKL*
Ga0182004_1013805813300014486RootMLVAGEAQRRQGLGQIQGHLRVPLITVTLLTYFTHALLDSRVLAVGNSGAAALRGDTPADPGNGDAVEHHAEHQ*
Ga0182004_1013816613300014486RootMLVAGEAQRRRGLGQIQGQLRVPLIKATRLTYFTRALLDSRVLAVGNGGAAALRSGTPADPGNGDAVEVEDEQERLKVKL*
Ga0182004_1013862213300014486RootMLVAGEAQRRRGLGQIQGYLRVPLIKVTLLTYFTRALLDSRVLAVGNGGAAVLHGITPANLGIGDAVEVADEQERLKAKL*
Ga0182004_1013876623300014486RootTGEMLVAGEAQRRRGLGRIQGHLRVPLIKATLLTYFTRALLDSRVLAVGNGGAVALRGVTPADLGIGDAVEVGDEQERLKVKL*
Ga0182004_1014145813300014486RootGEAQRRRGFRRIQGHLRVPLIKATLLTYFTRALLDPKVLAVRNGGAAALRGVTPADPGNGDAVELADEQE*
Ga0182004_1014253313300014486RootMLIASEAQRRRGLGRIQGHLRVPLIEATLLTYFTRALVDSGVLAVGNGGAAPLRDVTPADLGNGDAVELHAEH*
Ga0182004_1014716223300014486RootMLVAGEARRRRGLGRIQGHLRVPPIKATLLTYFTRALLDSKVLAVGNGGAAALRGVTLADPGNGDVVELADEQERPKAKL*
Ga0182004_1015174723300014486RootDPRVSETVTGEMLAAGKCQRRRGLRRIQWHLRVPLIKATLLTYFTRDLLDPKVLAVGNGGAAALRGVTPADPGNGDAVELHAEHQ*
Ga0182004_1015536523300014486RootVTGEKLATGKAQRRRGFRRIQGHLRVPLVKATLLTYFTRALLDPMVLAVGNGGAAALRGVTPADPGNGDAVELHAKHQ*
Ga0182004_1015646323300014486RootMLVAGEAQRRRGLGRIQGHLRVSLIKATLLTYFTRALLDPRVLAVGNGGAAVLRGVMPADPGYGDAVELHAEHQ*
Ga0182004_1015778913300014486RootRIQGHLRVPLIKADSVTYFTRALRDPRVLAVGNGGSAALRGVTPADLGNGDAVELADEQE
Ga0182004_1015826513300014486RootVTGEKLATGKAQRRRGLRRIQGHLRVPLIKATLLTYFTHALLDPKVLAVGNGGAAALRGGTPADPGNGDAVEVHAEHQ*
Ga0182004_1016194713300014486RootRDPRVSETVTGEKLAAGKAQRRRGLRRIQGHLRVPLIKATLLTYITRALLDPKVLAVGNGGAAALRGVTPADLGKGDAVEVHTEHQ*
Ga0182004_1016464713300014486RootMLVAGEAQRRRGLGRIQSYLRVPFIKATLLTYFTRALLDSRVLAVGNGGAAALRGGTPADPGNGDAVEVADE*
Ga0182004_1016629823300014486RootVTGEKLATCKAQRRRGFRRIQGHLRVPLIKATLLTYFTRALLDPKVLAIGNGRAAALRGVTPADPGNGDAVELHAEHQ*
Ga0182004_1016851213300014486RootMLVAGEAQRRRGLGRIQGHQRVPLIKATLLTYFTRALLDPRVLAVGNGGAAALRGGTPADLGNGDVVERHAEHQ*
Ga0182004_1017058213300014486RootVTGEKLAAGKAQRRRGFRRIQGHLRVPLTKVTLLTYFTRALLDSRVLAVGKGGAAALRGITPVDPGNGDAVEVADEQEGLKAKL*
Ga0182004_1017205213300014486RootMLVAGEAQRRRGLGWIQEHLRVTLVKATRLTYFTRALLDSRVLAVGNGGTAALRGGTPADPGNGDAVEVADEQEQFKAKL*
Ga0182004_1017286113300014486RootVTGEKLATGKSQRRQGLRQIQGHLRVPLIKATLLTYITRALLDPKVLAVGNGGAAALRGVTPADLGKGDAVEVHAEHQ*
Ga0182004_1017405613300014486RootMLVAGEAQPRRGLGQIQGHLRVPLIKATLLTYFTHALLDSNVLAVGNGGAAALRGVTPADLGNGDAVELHAEHQ*
Ga0182004_1018074913300014486RootVTGETLVAGEAQRRRGLGRIQGHLRVPLIKATLLTYFTRALLDPRVLAVENGGAAALRGVTPADLGNGDAVELHAEHQ*
Ga0182004_1018499013300014486RootGHLRVPLTKATLLTYFTRALLDSRVLAVGNGGAAALRGVTPAVADEQERLKAKL*
Ga0182004_1019409313300014486RootHLRVPLTKATLLTYFTRALLDSRVLAVGNGGAAALRGVTPADPGNGDAVEVADEQEGLKAKLYEEESRPEVNQ*
Ga0182004_1019501113300014486RootVGSVDIRDPRDRGTETGEKLIAGGTRRRRGLRWIQGHLRVPLLKARPLSYFTRALLNPRVLAVANGGAVVLRGVTPANLGNGDAVQLADEQERLKTKL*
Ga0182004_1019829413300014486RootRRIQGHLRVPLIKATLLTYFTRALLDPKVLAVGNGGAAALRGVTPADLGNGNAVELADEQERLKAKL*
Ga0182004_1020011213300014486RootMLAAGKAQRRRGLRRIQGHLRVPLIKATLLTYFTRALLDPKVLAVGNGGAAALRGVTPADPGNGDAVELHAEHQ*
Ga0182004_1023051213300014486RootMLVAGEAQRRRGLGRIQGHLRVLLIKATLLTYFTRALLDSRVLAVGNGGAAALRGGTPADPGNGDAVEVADKQERLKATL*
Ga0182004_1023641913300014486RootGEMLVAGETQRRRGLGRIQGHLRVPLIKADSVTYSTCALLDPRVLAVGNGGAAVLRGVTPADLGNGDAVELADEQE*
Ga0182004_1023871623300014486RootMLVAGEAQRRRGLGRIQGHLCVPLIKATRLTYFTRALLDSRVLAVGNGGAAALRGVTPADLGNGDAVELHAEYQ*
Ga0182004_1024896313300014486RootQGHLRVPLLKADSVTYFTRALLDPRVLAVVNGGAVVLRGVTPANLGIGDTVEVADEQERLKAKL*
Ga0182004_1025610213300014486RootMLVAGKAQRRRGLRRIQGRLRVPLIKATLLTYFTRALLDSSVLAVGNGGAAALRDVTPTDPGNGDVVEVADEQERLKAKL*
Ga0182004_1025884123300014486RootLQNSDPEGCEREADTRDPRVSETVTGEMLAAGKAQRRRGLHLIQGHLRVPLIKATLLTYFTRTLLDPKVLAVGNGGAAALRGVTPADPGNGDAVELHAEHQ*
Ga0182004_1026798513300014486RootMLVAGEAQRRRGLGRIQGHLCVPLIKATLLTYFTRALLDPKVLAVENGGAVALRGVTPADLGNGDAVERHAEHQRTKGKR*
Ga0182004_1027445313300014486RootRRGLGRIPGHLRVPLIKATLLTYFARALLDPKVLAVGNGGAPALRGDTPADPGSGDVVERHAEHQ*
Ga0182004_1027942113300014486RootVNQRGERGEADTRDPRVSETVTGERLVAGEAQRRRGLSRIQGHLRVPLSKATLLTYFTRALLDSRVLAVGNGGAAALRGVTPANLGIGDAVEVEDEQERLKGKL*
Ga0182004_1028099213300014486RootVNQRGERGEADTRDPRVSETVTGERLVAGEAQRRRGLGRIQGHLRVSLTKATLLTYFTRALLDSRVLAVGNGGAAALRGVTPANLGIGDAVEVADEQERLKGKL*
Ga0182004_1029216823300014486RootVTGEKLAAGKAQRRRGLRRIQGHLRAPLIEATLLTYFTRALLDSRVLAVGNGRAAALRGGTPADPSNGDAVEVADEQERLKAKL*
Ga0182004_1029223813300014486RootMLVAGEAQRRRGLGRIQSHLRVPFIKATLLTYFTRALLDSRVLAVGNGGAAALRGGTPADPGNGDAVEV
Ga0182004_1029526713300014486RootRRGLGRIQGHLRVPLVKATLLTYFTRALLDSRVLAVGNGGAAALRGDTPADPGNGDAVEVADEQEQLKAKL*
Ga0182004_1030128213300014486RootMLVASEAQRRQGLGQIQGHLRVPLIKATRLTYFTHALLDSRVLAVGNGGAAALRGGTPADPGNGDAVEVADEQEQFKAKL*
Ga0182006_111324813300015261RhizosphereMLAAGKAQRRRGLCRIQGHLRVPLIKATLLTYFTRALLDSRVLAVGNGGAAALRGDTPPDPSNGDAVEVADEQERLKAKL*
Ga0182007_1008938513300015262RhizosphereLVSETETGEMLVAGEARRRQGLGRIQGHLRVPLIKATLLTYFTRALLDPRVLAVGNGGAAALRGDTPADLGNGDAVELADEQERLKAKL*


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.