NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F064241

Metagenome / Metatranscriptome Family F064241

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F064241
Family Type Metagenome / Metatranscriptome
Number of Sequences 129
Average Sequence Length 55 residues
Representative Sequence LTVDWNDYLYQLKYPTAYYVIPTGGTAAVTGNQARSFWKNNRALTFGASLLFFR
Number of Associated Samples 111
Number of Associated Scaffolds 129

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 0.00 %
% of genes near scaffold ends (potentially truncated) 96.90 %
% of genes from short scaffolds (< 2000 bps) 93.80 %
Associated GOLD sequencing projects 108
AlphaFold2 3D model prediction Yes
3D model pTM-score0.24

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Bacteria (98.450 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil
(31.783 % of family members)
Environment Ontology (ENVO) Unclassified
(32.558 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(40.310 % of family members)


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Multiple Sequence Alignments

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 29.27%    β-sheet: 0.00%    Coil/Unstructured: 70.73%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.24
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 129 Family Scaffolds
PF04972BON 84.50
PF01242PTPS 10.08
PF03454MoeA_C 0.78
PF01029NusB 0.78
PF02113Peptidase_S13 0.78
PF01012ETF 0.78
PF03734YkuD 0.78

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 129 Family Scaffolds
COG07206-pyruvoyl-tetrahydropterin synthaseCoenzyme transport and metabolism [H] 10.08
COG0303Molybdopterin Mo-transferase (molybdopterin biosynthesis)Coenzyme transport and metabolism [H] 0.78
COG1376Lipoprotein-anchoring transpeptidase ErfK/SrfKCell wall/membrane/envelope biogenesis [M] 0.78
COG2025Electron transfer flavoprotein, alpha subunit FixBEnergy production and conversion [C] 0.78
COG2027D-alanyl-D-alanine carboxypeptidaseCell wall/membrane/envelope biogenesis [M] 0.78
COG2086Electron transfer flavoprotein, alpha and beta subunitsEnergy production and conversion [C] 0.78
COG3034Murein L,D-transpeptidase YafKCell wall/membrane/envelope biogenesis [M] 0.78

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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms98.45 %
UnclassifiedrootN/A1.55 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
2088090004|P1_DRAFT_NODE_254866_len_4746_cov_10_965655All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis4796Open in IMG/M
2162886012|MBSR1b_contig_13880896All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae954Open in IMG/M
2170459003|FZ032L002IBFQVAll Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes514Open in IMG/M
2170459005|F1BAP7Q02HNY6DAll Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes531Open in IMG/M
3300000891|JGI10214J12806_10988689All Organisms → cellular organisms → Bacteria846Open in IMG/M
3300001359|A3035W6_1001175All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes735Open in IMG/M
3300001664|P5cmW16_1012227All Organisms → cellular organisms → Bacteria1648Open in IMG/M
3300001686|C688J18823_10907906All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes559Open in IMG/M
3300004157|Ga0062590_101984316All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes603Open in IMG/M
3300004803|Ga0058862_12621540All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis741Open in IMG/M
3300005174|Ga0066680_10500647Not Available764Open in IMG/M
3300005437|Ga0070710_10580289All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes778Open in IMG/M
3300005563|Ga0068855_101972486All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes590Open in IMG/M
3300005575|Ga0066702_10482270All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis757Open in IMG/M
3300006034|Ga0066656_10558679All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes743Open in IMG/M
3300006175|Ga0070712_100167920All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis1700Open in IMG/M
3300006800|Ga0066660_11675975All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → unclassified Mesorhizobium → Mesorhizobium sp. M1A.F.Ca.IN.022.07.1.1506Open in IMG/M
3300006806|Ga0079220_10330227All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium958Open in IMG/M
3300006914|Ga0075436_101473528All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis517Open in IMG/M
3300009012|Ga0066710_102122056All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes825Open in IMG/M
3300009029|Ga0066793_10069074All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis2020Open in IMG/M
3300009137|Ga0066709_101191672All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium1121Open in IMG/M
3300009143|Ga0099792_11107635All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes534Open in IMG/M
3300010040|Ga0126308_10545735All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes787Open in IMG/M
3300010137|Ga0126323_1052933All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes682Open in IMG/M
3300010137|Ga0126323_1133356All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes1003Open in IMG/M
3300010146|Ga0126320_1291068All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes958Open in IMG/M
3300010146|Ga0126320_1450795All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis785Open in IMG/M
3300010329|Ga0134111_10508003All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes530Open in IMG/M
3300010396|Ga0134126_10690310All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes1161Open in IMG/M
3300010399|Ga0134127_10091950All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis2634Open in IMG/M
3300010399|Ga0134127_10347844All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae1447Open in IMG/M
3300011332|Ga0126317_10785529All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae1007Open in IMG/M
3300011414|Ga0137442_1071869All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes727Open in IMG/M
3300012019|Ga0120139_1002187All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis5390Open in IMG/M
3300012198|Ga0137364_10538049All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes879Open in IMG/M
3300012202|Ga0137363_11742169All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes516Open in IMG/M
3300012206|Ga0137380_10690122All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes887Open in IMG/M
3300012211|Ga0137377_11620343All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes571Open in IMG/M
3300012211|Ga0137377_11947338All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis504Open in IMG/M
3300012212|Ga0150985_110686770All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes705Open in IMG/M
3300012212|Ga0150985_110876075All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes694Open in IMG/M
3300012212|Ga0150985_112617272All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes557Open in IMG/M
3300012285|Ga0137370_11006744All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes513Open in IMG/M
3300012349|Ga0137387_11213832All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes532Open in IMG/M
3300012356|Ga0137371_10119081All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae2062Open in IMG/M
3300012381|Ga0134026_1249771All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes525Open in IMG/M
3300012398|Ga0134051_1369405All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes638Open in IMG/M
3300012469|Ga0150984_103670701All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae1177Open in IMG/M
3300012469|Ga0150984_109738793All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes695Open in IMG/M
3300012469|Ga0150984_117636255All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes644Open in IMG/M
3300012917|Ga0137395_10618552All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes783Open in IMG/M
3300012923|Ga0137359_10621498All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes946Open in IMG/M
3300012925|Ga0137419_10404164All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes1068Open in IMG/M
3300012944|Ga0137410_10263609All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes1354Open in IMG/M
3300012957|Ga0164303_11469683All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes513Open in IMG/M
3300012961|Ga0164302_10570734All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes814Open in IMG/M
3300013296|Ga0157374_11234510All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes769Open in IMG/M
3300013770|Ga0120123_1169066All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes523Open in IMG/M
3300014058|Ga0120149_1215462All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes538Open in IMG/M
3300014166|Ga0134079_10468397All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes601Open in IMG/M
3300015359|Ga0134085_10414922All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis606Open in IMG/M
3300017997|Ga0184610_1313021All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes516Open in IMG/M
3300018051|Ga0184620_10037277All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae1310Open in IMG/M
3300018051|Ga0184620_10194085All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis672Open in IMG/M
3300018056|Ga0184623_10154495All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis1060Open in IMG/M
3300018066|Ga0184617_1084067All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes867Open in IMG/M
3300018071|Ga0184618_10429663All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes557Open in IMG/M
3300018468|Ga0066662_10727675All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes951Open in IMG/M
3300019865|Ga0193748_1029087All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes517Open in IMG/M
3300019868|Ga0193720_1022545All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis895Open in IMG/M
3300019870|Ga0193746_1032726All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis526Open in IMG/M
3300019876|Ga0193703_1068267All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes529Open in IMG/M
3300019878|Ga0193715_1013561All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes1755Open in IMG/M
3300019878|Ga0193715_1058321All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes823Open in IMG/M
3300019882|Ga0193713_1054740All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae1144Open in IMG/M
3300019883|Ga0193725_1039069All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae1243Open in IMG/M
3300019885|Ga0193747_1109583All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis663Open in IMG/M
3300019888|Ga0193751_1241299All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes565Open in IMG/M
3300019890|Ga0193728_1154918All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis1004Open in IMG/M
3300019999|Ga0193718_1026929All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes1278Open in IMG/M
3300020006|Ga0193735_1164180All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes563Open in IMG/M
3300020060|Ga0193717_1078699All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis1084Open in IMG/M
3300020070|Ga0206356_10995850All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes738Open in IMG/M
3300021151|Ga0179584_1175053All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes732Open in IMG/M
3300022756|Ga0222622_10595256All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes798Open in IMG/M
3300022756|Ga0222622_11192144All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes560Open in IMG/M
3300024249|Ga0247676_1066796All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes592Open in IMG/M
3300025553|Ga0208080_1000708All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis16760Open in IMG/M
3300025604|Ga0207930_1006900All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis3503Open in IMG/M
3300025910|Ga0207684_10711193All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes853Open in IMG/M
3300025915|Ga0207693_10900767All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes679Open in IMG/M
3300025933|Ga0207706_11707444All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes507Open in IMG/M
3300025949|Ga0207667_11186215All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes744Open in IMG/M
3300026023|Ga0207677_10328033All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis1274Open in IMG/M
3300026023|Ga0207677_10668142All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes919Open in IMG/M
3300026272|Ga0209913_1078927All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes717Open in IMG/M
3300026528|Ga0209378_1286482All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes525Open in IMG/M
3300027395|Ga0209996_1051747All Organisms → cellular organisms → Bacteria → Acidobacteria622Open in IMG/M
3300027765|Ga0209073_10050284All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes1366Open in IMG/M
3300028381|Ga0268264_11694766All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes642Open in IMG/M
3300028784|Ga0307282_10560337All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes555Open in IMG/M
3300028793|Ga0307299_10204033All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes744Open in IMG/M
3300028793|Ga0307299_10396492All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes517Open in IMG/M
3300028810|Ga0307294_10367122All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes535Open in IMG/M
3300028811|Ga0307292_10291890All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes682Open in IMG/M
3300028814|Ga0307302_10372455All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes705Open in IMG/M
3300028819|Ga0307296_10541645All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes637Open in IMG/M
3300028828|Ga0307312_10617891All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes717Open in IMG/M
3300028828|Ga0307312_10822730All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes615Open in IMG/M
3300028884|Ga0307308_10534164All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis562Open in IMG/M
3300030904|Ga0308198_1026886All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes803Open in IMG/M
3300030905|Ga0308200_1104245All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes608Open in IMG/M
3300030993|Ga0308190_1051114All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes798Open in IMG/M
3300031058|Ga0308189_10069300All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae1038Open in IMG/M
3300031058|Ga0308189_10101171All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes914Open in IMG/M
3300031058|Ga0308189_10189738All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes736Open in IMG/M
3300031058|Ga0308189_10540442All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes507Open in IMG/M
3300031093|Ga0308197_10167616All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis721Open in IMG/M
3300031094|Ga0308199_1071217All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes719Open in IMG/M
3300031114|Ga0308187_10145349All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes785Open in IMG/M
3300031114|Ga0308187_10231888All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes662Open in IMG/M
3300031123|Ga0308195_1046833All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes617Open in IMG/M
3300031231|Ga0170824_100326592All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes726Open in IMG/M
3300031716|Ga0310813_10553165All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes1012Open in IMG/M
3300031740|Ga0307468_101150217All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes695Open in IMG/M
3300032205|Ga0307472_101785360All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes610Open in IMG/M
3300034644|Ga0370548_053822All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes724Open in IMG/M


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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil31.78%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil10.85%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment4.65%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil4.65%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere3.10%
SoilEnvironmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil3.88%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil3.88%
PermafrostEnvironmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost3.88%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil2.33%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil2.33%
Avena Fatua RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere2.33%
Avena Fatua RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere2.33%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment1.55%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil1.55%
Arctic Peat SoilEnvironmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil1.55%
Grass SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grass Soil1.55%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil1.55%
Corn RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere1.55%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere1.55%
SoilEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Soil0.78%
Serpentine SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil0.78%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere0.78%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil0.78%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Permafrost → Soil0.78%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil0.78%
Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil0.78%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Soil0.78%
Prmafrost SoilEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Prmafrost Soil0.78%
SoilEnvironmental → Terrestrial → Soil → Loam → Grasslands → Soil0.78%
Host-AssociatedHost-Associated → Human → Digestive System → Large Intestine → Fecal → Host-Associated0.78%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere0.78%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere0.78%
Arabidopsis Thaliana RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere0.78%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere0.78%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere0.78%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere0.78%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
2088090004Permafrost microbial communities from permafrost in Bonanza Creek, Alaska - Permafrost Layer P1EnvironmentalOpen in IMG/M
2162886012Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1Host-AssociatedOpen in IMG/M
2170459003Grass soil microbial communities from Rothamsted Park, UK - March 2009 indirect MP BIO 1O1 lysis 0-21cmEnvironmentalOpen in IMG/M
2170459005Grass soil microbial communities from Rothamsted Park, UK - July 2009 direct MP BIO1O1 lysis 0-21cmEnvironmentalOpen in IMG/M
3300000891Soil microbial communities from Great Prairies - Wisconsin, Continuous corn soilEnvironmentalOpen in IMG/M
3300001359Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - (A30-35cm)- 6 month illuminaEnvironmentalOpen in IMG/M
3300001664Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - 5cm_reassembledEnvironmentalOpen in IMG/M
3300001686Grasslands soil microbial communities from Hopland, California, USAEnvironmentalOpen in IMG/M
3300004157Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2EnvironmentalOpen in IMG/M
3300004803Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - soil CB-2 (Metagenome Metatranscriptome)Host-AssociatedOpen in IMG/M
3300005174Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129EnvironmentalOpen in IMG/M
3300005437Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaGEnvironmentalOpen in IMG/M
3300005563Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2Host-AssociatedOpen in IMG/M
3300005575Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_151EnvironmentalOpen in IMG/M
3300006034Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_105EnvironmentalOpen in IMG/M
3300006175Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaGEnvironmentalOpen in IMG/M
3300006800Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109EnvironmentalOpen in IMG/M
3300006806Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100EnvironmentalOpen in IMG/M
3300006914Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5Host-AssociatedOpen in IMG/M
3300009012Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159EnvironmentalOpen in IMG/M
3300009029Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Permafrost soil replicate 1 DNA2013-189EnvironmentalOpen in IMG/M
3300009137Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158EnvironmentalOpen in IMG/M
3300009143Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2EnvironmentalOpen in IMG/M
3300010040Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot55EnvironmentalOpen in IMG/M
3300010137Soil microbial communities from California, USA to study soil gas exchange rates - SR-CA-SC1 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300010146Soil microbial communities from California, USA to study soil gas exchange rates - JR-CA-SND metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300010329Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_11112015EnvironmentalOpen in IMG/M
3300010396Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2EnvironmentalOpen in IMG/M
3300010399Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3EnvironmentalOpen in IMG/M
3300011332Soil microbial communities from California, USA to study soil gas exchange rates - SR-CA-SC2 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300011414Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT266_2EnvironmentalOpen in IMG/M
3300012019Permafrost microbial communities from Nunavut, Canada - A7_5cm_12MEnvironmentalOpen in IMG/M
3300012198Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaGEnvironmentalOpen in IMG/M
3300012202Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaGEnvironmentalOpen in IMG/M
3300012206Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaGEnvironmentalOpen in IMG/M
3300012211Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaGEnvironmentalOpen in IMG/M
3300012212Combined assembly of Hopland grassland soilHost-AssociatedOpen in IMG/M
3300012285Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaGEnvironmentalOpen in IMG/M
3300012349Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaGEnvironmentalOpen in IMG/M
3300012356Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaGEnvironmentalOpen in IMG/M
3300012381Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_20cm_2_24_1 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300012398Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_2_24_2 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300012469Combined assembly of Soil carbon rhizosphereHost-AssociatedOpen in IMG/M
3300012917Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaGEnvironmentalOpen in IMG/M
3300012923Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaGEnvironmentalOpen in IMG/M
3300012925Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012944Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012957Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MGEnvironmentalOpen in IMG/M
3300012961Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MGEnvironmentalOpen in IMG/M
3300013296Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaGHost-AssociatedOpen in IMG/M
3300013770Permafrost microbial communities from Nunavut, Canada - A15_5cm_18MEnvironmentalOpen in IMG/M
3300014058Permafrost microbial communities from Nunavut, Canada - A3_65cm_0.25MEnvironmentalOpen in IMG/M
3300014166Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09182015EnvironmentalOpen in IMG/M
3300015359Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09182015EnvironmentalOpen in IMG/M
3300017997Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100_coexEnvironmentalOpen in IMG/M
3300018051Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_5_b1EnvironmentalOpen in IMG/M
3300018056Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100_b1EnvironmentalOpen in IMG/M
3300018066Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_5_b1EnvironmentalOpen in IMG/M
3300018071Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_b1EnvironmentalOpen in IMG/M
3300018468Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111EnvironmentalOpen in IMG/M
3300019865Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1s1EnvironmentalOpen in IMG/M
3300019868Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2s1EnvironmentalOpen in IMG/M
3300019870Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1m1EnvironmentalOpen in IMG/M
3300019876Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3a2EnvironmentalOpen in IMG/M
3300019878Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2m2EnvironmentalOpen in IMG/M
3300019882Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H3a2EnvironmentalOpen in IMG/M
3300019883Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2a2EnvironmentalOpen in IMG/M
3300019885Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1m2EnvironmentalOpen in IMG/M
3300019888Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1c2EnvironmentalOpen in IMG/M
3300019890Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1c1EnvironmentalOpen in IMG/M
3300019999Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2a1EnvironmentalOpen in IMG/M
3300020006Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1m2EnvironmentalOpen in IMG/M
3300020022Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1s2EnvironmentalOpen in IMG/M
3300020060Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2c2EnvironmentalOpen in IMG/M
3300020070Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-1 (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300021151Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_06_16RNAfungal (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300022756Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1EnvironmentalOpen in IMG/M
3300024249Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK17EnvironmentalOpen in IMG/M
3300025553Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-3 deep-092012 (SPAdes)EnvironmentalOpen in IMG/M
3300025604Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-3 shallow-092012 (SPAdes)EnvironmentalOpen in IMG/M
3300025910Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025915Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025933Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025949Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026023Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026272Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Permafrost soil leachate replicate DNA2013-203 (SPAdes)EnvironmentalOpen in IMG/M
3300026528Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156 (SPAdes)EnvironmentalOpen in IMG/M
3300027395Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M2 PM (SPAdes)Host-AssociatedOpen in IMG/M
3300027765Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100 (SPAdes)EnvironmentalOpen in IMG/M
3300028381Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300028784Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_121EnvironmentalOpen in IMG/M
3300028793Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_159EnvironmentalOpen in IMG/M
3300028810Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_151EnvironmentalOpen in IMG/M
3300028811Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_149EnvironmentalOpen in IMG/M
3300028814Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_183EnvironmentalOpen in IMG/M
3300028819Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_153EnvironmentalOpen in IMG/M
3300028828Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_202EnvironmentalOpen in IMG/M
3300028884Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_195EnvironmentalOpen in IMG/M
3300030904Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_202 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300030905Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_204 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300030993Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_185 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031058Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_184 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031093Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_198 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031094Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_203 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031114Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_182 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031123Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_196 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031231Coassembly Site 11 (all samples) - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031716Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3EnvironmentalOpen in IMG/M
3300031740Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05EnvironmentalOpen in IMG/M
3300032205Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05EnvironmentalOpen in IMG/M
3300034644Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_123 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
P1_DRAFT_003530502088090004SoilLKYPTAYFVIPTGGTAAVTGNQARSFWKNNRALTLGASLLFFR
MBSR1b_0784.000067102162886012Miscanthus RhizosphereDWNDYLYQLKYPTAYYVIPAGGTAAATNEARSFWKNNKALTFGASLLFFR
E4A_119468402170459003Grass SoilLTVDWNDYLYQLKYPTAYYVIPTGGTAAVTGNQARSFWKNNRALTFGASLLFFR
E41_002536602170459005Grass SoilFGGGLRYVPGGRLQITVDWNDYLYQLKYPTAYYVIPVGGTAAATNEARSFWKNNKALTFGASLLFFR
JGI10214J12806_1098868913300000891SoilRYYVAPTGGTAAVAGDQARSFWKSNRALTFGASLLFFR*
A3035W6_100117523300001359PermafrostWNDYLYQLKYPAAYYQIPTGGGTAALTNQARSFWKNNRALTLGASLLFFR*
P5cmW16_101222713300001664PermafrostNAYYLTPTNGTAAAGSGQAKSFWKNNRALTLGASLLFFR*
C688J18823_1090790623300001686SoilFAFNFGGGLRYAPGGRFQLTADWNNYLYQLKYPTAYYVTPTGGTAAVTGNQARSFWKNNRALTIGASLLFFR*
Ga0062590_10198431623300004157SoilRFQLTADWNDYLYQLKYPTEYYVNPPGGTAAVTGNSSRSFWKNNRALTIGASLLFFR*
Ga0058862_1262154023300004803Host-AssociatedWVPGGRFQLTADWNDYLYQLKYPTAYYVNPTGGTAAVTGNQARSFWKGNRALTIGASLLFFR*
Ga0066680_1050064713300005174SoilYPTAYYVTPTGGTAAVTGNQARSFWKNNRALTIGASLLFFR*
Ga0070710_1058028923300005437Corn, Switchgrass And Miscanthus RhizosphereADWSNYLYQLHYPTAYYLTPTGGTAAITGNQARSFWKNNRALTIGASLLFFR*
Ga0068855_10197248613300005563Corn RhizosphereKYPTAYYVIPAGGTAAVPGGQARTFWKNNRALTIGASLLFFR*
Ga0066702_1048227013300005575SoilAFTYGAGLRWIPGGRFQLTADWNHYLYQLKYPTAYYLAPTGGPAAVSSSQARSFWKGNRALTIGASLLFFR*
Ga0066656_1055867923300006034SoilNYMYQLHYPTAYYLTPTGGTAAVTGNQARSFWKNNRALTIGASLLFFR*
Ga0070712_10016792043300006175Corn, Switchgrass And Miscanthus RhizosphereRFMLTADLNDYLYQIHYPTAYYVTPTGGTAAITGNQARSFWKNNRALTIGASLLFFR*
Ga0066660_1167597523300006800SoilPTAYYVTPTGGTAAVTGNQARSFWKNNRALTIGASLLFFR*
Ga0079220_1033022713300006806Agricultural SoilKYPTAYYLAPTGGTAAVSGQARSFWKGNRALTIGASLLFFR*
Ga0075436_10147352813300006914Populus RhizosphereLYQLRYPTAYYLTPTGGTAVITGNQARSFWKNNRALTIGASLLFFR*
Ga0066710_10212205623300009012Grasslands SoilDWNNYLYQLKYPTAYYVIPTGGTAAVTGNQARSFWKNNRALTLGASLLFFR
Ga0066793_1006907443300009029Prmafrost SoilRYVPGGRFQLTFDWNDYLYQTKYPTAYYVIPTGGTAAVTSGQARSFWKSNRALTLGASLLFFR*
Ga0066709_10119167213300009137Grasslands SoilYQLKYPTAYYVIPTGGTAAVTGNQARSFWKNNRALTLGASLLFFR*
Ga0099792_1110763523300009143Vadose Zone SoilAYYITPATGTAAASTEARSFWKNNRAFTLGASLLFFR*
Ga0126308_1054573513300010040Serpentine SoilNYLYQLKYPTAYYVNPTSGTAVVTGDQARSFWKNNRALTLGASLLFFR*
Ga0126323_105293313300010137SoilRYAPGGRFQITADWNDYLYQIKYPTEYFLTPTGGTAVAGSDQARSFWKNNGALTIGASLLFFR*
Ga0126323_113335623300010137SoilWAPGGRFQLTADWTDYLYQLKYPTEYYLTPTGGTAALPGDQERSFWKNNRALTIGASLLFFR*
Ga0126320_129106813300010146SoilIRYAPGGRFQITADWNDYLYQLKYPTEYYVVPTGGTAAVSGNQARSFWKNNRALTIGASLLFFR*
Ga0126320_145079523300010146SoilWVPGGRFQLTADWSDHLYQLKYPTAYYLAPTGGTAAVPSDQARSFWKGNRALTIGASLLFFR*
Ga0134111_1050800313300010329Grasslands SoilIPTGGTAAVTGNQARSFWKNNRALTLGASLLFFR*
Ga0134126_1069031023300010396Terrestrial SoilYQLKYPTEYYVNPSGGTAAVSPDQARTFWKNNRALTIGASLLFFR*
Ga0134127_1009195043300010399Terrestrial SoilFGTPFAFSFGGGLRYAPGGRFQITADWNDYLYQLKYPTEYYVNPSGGTAAVSPDQARTFWKNNRALTIGASLLFFR*
Ga0134127_1034784413300010399Terrestrial SoilRFQITADWNDYLYQLKYPTEYYVNPSGGTAAVSPDQARTFWKNNRALTIGASLPFFR*
Ga0126317_1078552913300011332SoilKYAPGGRFSVTADWNDFLYQLHYPTEYYLNPVSGTAVITGTQARSFWKNNRALTIGASLLFFR*
Ga0137442_107186913300011414SoilYFVIPTGGTAAVTGNQARSFWKNNRALTLGASLLFFR*
Ga0120139_100218713300012019PermafrostGRFQLTADWTYFFYQLKYPAAYYVTPTGGTAAVTGDQARSFWKNNRALTIGASLLFFR*
Ga0137364_1053804923300012198Vadose Zone SoilYQPHYPADYYLTPTGGTAAVIGSQSRSFWKNNRAWTIGASLLFFR*
Ga0137363_1174216913300012202Vadose Zone SoilDYLYQLKYPTAYYVTPASGTAAVTGNQARSFWKNNRALTFGASLLFFR*
Ga0137380_1069012213300012206Vadose Zone SoilYLYQLKYPTAYYVIPTGGTAAVTGNQARSFWKNNRALTLGASLLFFR*
Ga0137377_1162034313300012211Vadose Zone SoilLHYPTAYYVIPTGGTAAVTGDQQRSFWKNNRALTIGASLLFFR*
Ga0137377_1194733813300012211Vadose Zone SoilFAFTFGGGLKYVPGGRFQVTVDWNDYLYQLKYPTAYYVAPTGGTAAAPGNQSRSFWKNNGALTVGASLLFFR*
Ga0150985_11068677023300012212Avena Fatua RhizosphereRYVPGGRFQLRADWGDYLYQLKYPASYYVNSTGTGPAVPSDQSRTFWKNNRALTVGASLLFFQ*
Ga0150985_11087607513300012212Avena Fatua RhizosphereRYVPGGRFQLTADWNDYLYQLKYPTAYYLAPTGGTAAVSSSQARSFWKGNRALTIGASLLFFR*
Ga0150985_11261727223300012212Avena Fatua RhizospherePGGRFQLRADLGDYLYQLKYPTSYYINSSGTGPAVPTGQARTFWKNNRALTVGASLLFFQ
Ga0137370_1100674423300012285Vadose Zone SoilVPGGRFQLRADWGDYLYQLKYPAAYYLTPTTGSAAVGGGQARSFWKNNRALTLGASLLFFR*
Ga0137387_1121383223300012349Vadose Zone SoilLNDYLYQLKYPTAYYVTPTNGTAAVTGNQARSFWKNNRAFTLGASLLFFR*
Ga0137371_1011908143300012356Vadose Zone SoilLRYVPGGRFQLTADWNNYLYQLKYPTAYYVIPTGGTAAVAGNQARSFWKNNRALTIGASLLFFR*
Ga0134026_124977113300012381Grasslands SoilGGRFQLTADWNNYLYQLKYPTAYYVTPTGGTAAVTGNQARSFWKNNRALTIGASLLFFR*
Ga0134051_136940513300012398Grasslands SoilRYVPGGRFQLTADWNNYLYQLKYPTAYYVIPTGGTAAVTGNQARSFWKNNRALTLGASLLFFR*
Ga0150984_10367070133300012469Avena Fatua RhizosphereFQLTADWNNYLYQLKYPTAYYVTPTGGTAAVTGNQARSFWKNNRALTLGASLLFFR*
Ga0150984_10973879313300012469Avena Fatua RhizosphereGRFQLTADWNDYLYQLKYPTAYYLAPTGGTAAVSSSQARSFWKGNRALTIGASLLFFR*
Ga0150984_11763625513300012469Avena Fatua RhizosphereRYVPGGRFQLRADWGDYLYQLKYPTSYYINSSGTGPAVPTGQARTFWKNNRALTVGASLLFFQ*
Ga0137395_1061855213300012917Vadose Zone SoilKYVPGGRFQLTVDWNDYLYQLKYPTAYYVIPTGGTAAVTGNQARSFWKNNRALTVGASLLFFR*
Ga0137359_1062149813300012923Vadose Zone SoilTPTSGTAAVTGNQARSFWKNNRALTFGASLLFFR*
Ga0137419_1040416423300012925Vadose Zone SoilTVDWNDYLYQLKYPTAYYVAPTGGTAAAPGDQARSFWKNNRALTVGASLLFFR*
Ga0137410_1026360923300012944Vadose Zone SoilFQLTVDWSDYLYQLKYPTAYYVTPTSGTAAVTGNQARSFWKNNRALTFGASLLFFR*
Ga0164303_1146968323300012957SoilADWNDYLYQLKYPTAYYLAPTGGTAAVSSQARSFWKGNRALTIGASLLFFR*
Ga0164302_1057073413300012961SoilYPTEYYVVPAGGTAAVSGTQPRSFWKTNRALTIGASLLFFR*
Ga0157374_1123451023300013296Miscanthus RhizospherePGVPLTPTVDWNDYLYQLKYPTAYYVIPAGGTAAATNEARSFWKNNKALTFGASLLFFR*
Ga0120123_116906623300013770PermafrostDWNDYLYQLKYPAAYYQIPTGGGTAALTNQARSFWKNNRALTLGASLLFFR*
Ga0120149_121546223300014058PermafrostGRFQLRADWGDYLYQLKYPAAYYLTPATGTAAVGGGQARSFWKNNRALTLGASLLFFR*
Ga0134079_1046839723300014166Grasslands SoilGSGLRYAPGGRFQLTADWNDYLYQLKYPTAYYVTPTGGTAAVTGNQARSFWKNNRALTIGASLLFFR*
Ga0134085_1041492213300015359Grasslands SoilPFAFTFGGGLRYVPGGRFQLTADWNNYLYQLKYPTAYYVIPTGGTAAVTGNQARSFWKNNRALTIGASLLFFR*
Ga0184610_131302123300017997Groundwater SedimentWNDYLYQLKYPTQYYSNTTGTGAAAPSGQARSFWKNNGALTIGASLLFFQ
Ga0184620_1003727733300018051Groundwater SedimentYVPGGRFQLRVDWNDYLYQLKYPTQYYVNTTGTGAAAPSSQARSFWKNNQALTVGASLLFFR
Ga0184620_1019408523300018051Groundwater SedimentFSFGGGLRFVPGGRFQLTLDWNDYLYQLKYPTKYYVAPTGGTAAVAGDQARSFWKSNRALTFGASLLFFR
Ga0184623_1015449513300018056Groundwater SedimentFSFGGGLRYVPGGRFQLSVDWNDYLYQLKYPAKYYENTGSGAVAPPNQARSFWKNNGALTIGASLLFFQ
Ga0184617_108406723300018066Groundwater SedimentGGRFQLRVDWNDYLYQLKYPTQYYSTTAGAGTVAPSGQARSFWKNNGALTIGASLLFFQ
Ga0184618_1042966323300018071Groundwater SedimentFVPGGRFQLRADWNDYLYQLKYPTQYYINVAGGGAAAGPSQSRSFWKNNGALTLGASYLFFR
Ga0066662_1072767523300018468Grasslands SoilRWIPGGRFQLTADWNHYLYQLKYPTAYYLAPTGGPAAVSSSQARSFWKGNRALTIGASLLFFR
Ga0193748_102908723300019865SoilLALDWTDFLYQLKYPPDYYVNTGNGAAVPPDQSRTFWKNNRALTLGASLLIFR
Ga0193720_102254533300019868SoilWNDYLYQIKYPDKYYIVPVGGTAAAVGPKQSRSFWKNNGALTLGASFLFFR
Ga0193746_103272623300019870SoilFGTPFAFTFGGGLRYVPGGRIQLTLDWNDYLYQLKYPADYYIIPVGGTAAATNEARSFWKNNKALTFGASLLFFR
Ga0193703_106826723300019876SoilGLKYVPGGRFQLRADWSDYLYQLKYPAEYYINTTGTGPAAPPKQARSFWKNNRALTLGASLLFFR
Ga0193715_101356113300019878SoilRYVPGGRFQLRLDWNDYLYQLKYPSQYYSNTTGTTAPSGQARSFWKNNGALTIGASLLFF
Ga0193715_105832123300019878SoilGGLRFVPGGRFQLTLDWNDYLYQLKYPAAYYQIPTSGGTAALTNQARSFWKNNRALTLGASLLFFR
Ga0193713_105474033300019882SoilDYYIIPVGGTAAATNEARSFWKNNKALTFGASLLFFR
Ga0193725_103906913300019883SoilLKYPADYYIIPVGGTAAATNEARSFWKYNKALTFGASLLFFR
Ga0193747_110958323300019885SoilTPFAFSFGGGLRYVPGGRFQLRVDWNDYLYQLKYPTQYYSNTTGTGTAAPSGQARSFWKNNGALTIGASLLFFQ
Ga0193751_124129913300019888SoilGRFQLTVDWNDYLYQLKYPVAYYQIPTGGGNAALTNQARSFWKNNRALTLGASLLFFR
Ga0193728_115491833300019890SoilGGGLRFVPGGRFQLTLDWNDYLYQLKYPAAYYQIPTGGGTAALTNEARSFWKNNRALTLGASLLFFR
Ga0193718_102692933300019999SoilRLQLTVDWNDYLYQIKYPADYYIIPVGGTAAATNEARSFWKNNKALTFGASLLFFR
Ga0193735_116418013300020006SoilYPTAYYVIPTGGTAAVTGNQARSFWKGSRALTLGASLLFFR
Ga0193733_113110423300020022SoilGTPFAFTFGGGLRYVPGGRLQVTLDWNDYLYQIKYPADYYIIPVGGTAAATNEARSFWKNNKALTFGASLLFFR
Ga0193717_107869933300020060SoilFGTPFAFSFGGGLRYVPGGRFQVRLDWNDYLYQLKYPAEYYVNTTGTGTAAPSDQARSFWKNNGAFTLGASLLFFR
Ga0206356_1099585023300020070Corn, Switchgrass And Miscanthus RhizosphereVPGGRLQITVDWNDYLYQLKYPTAYYVIPAGGTAAATNEARSFWKNNKALTFGASLLFFR
Ga0179584_117505313300021151Vadose Zone SoilSRLQLTLDWNDYLYQLKYPTAYYVIPAGGTAAATNEARSFWKNNKALTFGASLLFFR
Ga0222622_1059525613300022756Groundwater SedimentDWNDYLYQLKYPAKYYENTGSGAVAPPNQAQSFWKNNGALTVGASLLFFR
Ga0222622_1119214413300022756Groundwater SedimentRFQLRVDWNDYLYQLKYPTQYYINTTGTGAAAPSSQARSFWKNNRALTVGASLLFFR
Ga0247676_106679613300024249SoilYVIPAGGTAAATNEARSFWKNNKALTFGASLLFFR
Ga0208080_100070813300025553Arctic Peat SoilPGGRFQLTFDWNDYLYQTKYPTAYYVIPTGGTAAVTGGQARSFWKSNRALTLGASLLFFR
Ga0207930_100690053300025604Arctic Peat SoilGGLRYAPGGRFQLTFDWNDYLYQTKYPTAYYVIPTGGTAAVTGGQARSFWKSNRALTLGASLLFFR
Ga0207684_1071119323300025910Corn, Switchgrass And Miscanthus RhizosphereLHYPTAYYLTPTGGTAAITGNQARSFWKNNRALTIGASLLFFR
Ga0207693_1090076723300025915Corn, Switchgrass And Miscanthus RhizosphereYAPGGRFMLTADLNDYLYQIHYPTAYYVTPTGGTAAITGNQARSFWKNNRALTIGASLLFFR
Ga0207706_1170744423300025933Corn RhizosphereLTADWNDYLYQLKYPTAYYVNPTGGTAAVTGNQARSFWKGNRALTIGASLLFFR
Ga0207667_1118621523300025949Corn RhizosphereWSHYLYQLKYPTKYYLAPTGGTAAVPANQARSFWKGNRALTIGASLLFFR
Ga0207677_1032803333300026023Miscanthus RhizospherePFAFTYGGGLKFVPGGRFVLTADWSNYLYQLKYPTAYYVTPTGGTAAVVGNQARSFWKNNRALTLGASLLFFR
Ga0207677_1066814223300026023Miscanthus RhizospherePGGRFQLRADLNDYLYQVKYPTQYFVAPLNGTALAGTDQARSFWKNNPSITLGASYLFFR
Ga0209913_107892713300026272SoilGLRYVPGGRFQLTFDWNDYLYQTKYPTAYYVIPTGGTAAVTGGQARSFWKNNRGVTLGASLLFFR
Ga0209378_128648223300026528SoilVDWNNYLYQLKYPTAYYVIPTGGTAAVGGNQARSFWKNNRALTLGASLLFFR
Ga0209996_105174723300027395Arabidopsis Thaliana RhizosphereGGLRYVPGGRFQLRLDWNDYLYQIKYPPEYFVNTTGTGAAAPSDQERSFWKNNGAFTLGASLLFFR
Ga0209073_1005028413300027765Agricultural SoilKYPTAYYLAPTGGTAAVSGQARSFWKGNRALTIGASLLFFR
Ga0268264_1169476613300028381Switchgrass RhizosphereLKYPTDYYVNPPGGTAAVTTNSSRTFWKNNRALTIGASLLFFR
Ga0307282_1056033713300028784SoilKYYIVPTGATAAAVGPRQSRSFWKNNGALTLGASFSFFR
Ga0307299_1020403323300028793SoilRYVPGGRFQLRVDWNDYLYQLKYPTQYYVNTTGSGPAAPSGQARSFWKNNQALTVGASLLFFR
Ga0307299_1039649223300028793SoilYQLKYPTQYYSNTTGTGTAAPSGQARSFWKNNGALTIGASLLFFQ
Ga0307294_1036712213300028810SoilLYQLKYPTQYYSNTTGTGTAAPSGQARSFWKNNGALTIGASLLFFQ
Ga0307292_1029189023300028811SoilYLYQLKYPTQYYVNTTGSGPAAPSGQARSFWKNNQALTVGASLLFFR
Ga0307302_1037245523300028814SoilDYLYQLKYPTQYYSNTTGTGAAAPSGQARSFWKNNGALTIGASLLFFQ
Ga0307296_1054164523300028819SoilYYQIPTGGGTAALTNQARSFWKNNRALTLGASLLFFR
Ga0307312_1061789113300028828SoilYQLKYPAKYYENTGSGAVAPPNQARSFWKNNGALTVGASLLFFR
Ga0307312_1082273013300028828SoilYVPGGRFQLRVDWNDYLYQLKYPTQYYSNTTGTGTVAPSGQARSFWKNNGALTIGASLLFFQ
Ga0307308_1053416413300028884SoilFSFGGGLRFVPGGRFQLRADWNDYLYQLKYPTQYYINVAGGGAAAGPSQSRSFWKNNGALTLGASYLFFR
Ga0308198_102688623300030904SoilQLRVDWNDYLYQLKYPTQYYSNTTGTGTAAPSGQARSFWKNNGALTIGASLLFFQ
Ga0308200_110424523300030905SoilDWNDYLYQLKYPSQYYSNTTGTTAPSGQARSFWKNNGALTIGASLLFFQ
Ga0308190_105111413300030993SoilQLRVDWNDYLYQLKYPTQYYSNTTGAGTAAPSGQARSFWKNNGALTIGASLLFFQ
Ga0308189_1006930013300031058SoilLKYPTQYYSNTTGTGTAAPSGQARSFWKNNGALTIGASLLFFQ
Ga0308189_1010117123300031058SoilGRFQLRVDWNDYLYQLKYPTQYYSNTTGTGTVAPSGQARSFWKNNGALTIGASLLFFQ
Ga0308189_1018973813300031058SoilVPGGRFQLTLDWNDYLYQLKYPTKYYVAPTGGAAAVAGDQARTFWKSNRALTLGASLLFF
Ga0308189_1054044223300031058SoilYVPGGRFQLRADWSDYLYQLKYPAKYYINTTGTGPAAPPKQARSFWKNNGALTLGASLLFFR
Ga0308197_1016761613300031093SoilFSFGSGLRYVPGGRFQLRVDWNDYLYQLKYPTQYYSNTTGAGTAAPSGQARSFWKNNGALTIGASLLFFQ
Ga0308199_107121713300031094SoilRYVPGGRFQLRADWNDYLYQLKYPTQYYIVPTGATAAVVGPRQSRSFWKNNGALTVGASFLFFR
Ga0308187_1014534913300031114SoilPGGRFQLRVDWNDYLYQLKYPTKYYENTGSGAVAPPNQARSFWKNNGALTVGASLLFFR
Ga0308187_1023188823300031114SoilLRVDWNDYLYQLKYPTQYYRNTTGTGTVAPSGQARSFWKNNGALTIGASLLFFQ
Ga0308195_104683313300031123SoilLRLDWNDYLYQLKYPSQYYSNTTGTTAPSGQARSFWKNNGALTIGASLLFFQ
Ga0170824_10032659223300031231Forest SoilVDWNDYLYQLKYPTAYYVIPVGGTAAATNEARSFWKNNKALTFGASLLFFR
Ga0310813_1055316523300031716SoilGGRFQLTADWNDYLYQLKYPTAYYVNPIGGTAAVTGNQARSFWKGNRALTIGASLLFFR
Ga0307468_10115021713300031740Hardwood Forest SoilVIPAGGTAAVPGGQARTFWKNNRALTIGASLLFFR
Ga0307472_10178536023300032205Hardwood Forest SoilLRYPTAYYLTPTGGTAVITGNQARSFWKNNRALTIGASLLFFR
Ga0370548_053822_544_7023300034644SoilVDWNDYLYQLKYPTQYYSNTTGAGTAAPSGQARSFWKNNGALTIGASLLFFQ

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Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
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