Metagenome Family F064216

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F064216
Family Type	Metagenome
Number of Sequences	129
Average Sequence Length	118 residues
Representative Sequence	MTTQSMDAAAEHELSELVACTLIDTDLKTQRERWINLGENFGLGRYETDDGLRLTFKDHPAVEAELQALVEVENECCSWAAWSIERGKDGALVMAARSQDDGIAALHGMFTSATPWSRRQHR
Number of Associated Samples	103
Number of Associated Scaffolds	129

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	82.68 %
% of genes near scaffold ends (potentially truncated)	21.71 %
% of genes from short scaffolds (< 2000 bps)	82.17 %
Associated GOLD sequencing projects	96
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.73

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Bacteria (98.450 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil (18.605 % of family members)
Environment Ontology (ENVO)	Unclassified (27.907 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (67.442 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 43.33% β-sheet: 18.00% Coil/Unstructured: 38.67%
Feature Viewer

Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.73
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.73
Powered by PDBe Molstar

SCOP family	SCOP domain	Representative PDB	TM-score
d.74.2.1: C-terminal domain of arginine repressor	d2p5ma_	2p5m	0.58183
e.29.1.2: RNA-polymerase beta-prime	d1twfa_	1twf	0.5539
e.11.1.0: automated matches	d3ilwa_	3ilw	0.53469
d.95.2.2: Intein endonuclease	d1dq3a4	1dq3	0.5335
e.29.1.2: RNA-polymerase beta-prime	d4c2ma_	4c2m	0.53047

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 129 Family Scaffolds
PF13411	MerR_1	25.58
PF00376	MerR	6.98
PF01243	Putative_PNPOx	2.33
PF08281	Sigma70_r4_2	1.55
PF09278	MerR-DNA-bind	1.55
PF02801	Ketoacyl-synt_C	1.55
PF00291	PALP	1.55
PF01202	SKI	0.78
PF02675	AdoMet_dc	0.78
PF00498	FHA	0.78
PF10282	Lactonase	0.78
PF07883	Cupin_2	0.78
PF07690	MFS_1	0.78
PF04185	Phosphoesterase	0.78
PF03950	tRNA-synt_1c_C	0.78
PF01896	DNA_primase_S	0.78
PF13489	Methyltransf_23	0.78
PF12680	SnoaL_2	0.78
PF04542	Sigma70_r2	0.78
PF02557	VanY	0.78
PF04072	LCM	0.78
PF01861	BpsA_C	0.78

COG ID	Name	Functional Category	% Frequency in 129 Family Scaffolds
COG0789	DNA-binding transcriptional regulator, MerR family	Transcription [K]	1.55
COG0008	Glutamyl- or glutaminyl-tRNA synthetase	Translation, ribosomal structure and biogenesis [J]	0.78
COG0568	DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32)	Transcription [K]	0.78
COG1191	DNA-directed RNA polymerase specialized sigma subunit	Transcription [K]	0.78
COG1568	Aminopropyltransferase BpsA, N(4)-bis(aminopropyl)spermidine biosynthesis	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.78
COG1586	S-adenosylmethionine decarboxylase	Amino acid transport and metabolism [E]	0.78
COG1595	DNA-directed RNA polymerase specialized sigma subunit, sigma24 family	Transcription [K]	0.78
COG1876	LD-carboxypeptidase LdcB, LAS superfamily	Cell wall/membrane/envelope biogenesis [M]	0.78
COG2173	D-alanyl-D-alanine dipeptidase	Cell wall/membrane/envelope biogenesis [M]	0.78
COG3315	O-Methyltransferase involved in polyketide biosynthesis	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.78
COG3511	Phospholipase C	Cell wall/membrane/envelope biogenesis [M]	0.78
COG4941	Predicted RNA polymerase sigma factor, contains C-terminal TPR domain	Transcription [K]	0.78

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	98.45 %
Unclassified	root	N/A	1.55 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	98.45 %
Unclassified	root	N/A	1.55 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	98.45 %
Unclassified	root	N/A	1.55 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	68.22 %
Unclassified	root	N/A	1.55 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.78 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	36.43 %
Unclassified	root	N/A	1.55 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.78 %

Name	Rank	Taxonomy	Distribution
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	13.95 %
Thermoleophilia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	1.55 %
Unclassified	root	N/A	1.55 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.78 %

Name	Rank	Taxonomy	Distribution
Micrococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	3.10 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	1.55 %
Pseudonocardiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales	1.55 %
Corynebacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	1.55 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.55 %
Unclassified	root	N/A	1.55 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.78 %

Name	Rank	Taxonomy	Distribution
Microbacteriaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae	3.10 %
Pseudonocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	1.55 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.55 %
Unclassified	root	N/A	1.55 %
Solirubrobacteraceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae	0.78 %
Nocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae	0.78 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.78 %

Name	Rank	Taxonomy	Distribution
Microbacterium	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae → Microbacterium	3.10 %
Amycolatopsis	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Amycolatopsis	1.55 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.55 %
Unclassified	root	N/A	1.55 %
Solirubrobacter	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter	0.78 %
Williamsia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Williamsia	0.78 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.78 %

Name	Rank	Taxonomy	Distribution
Microbacterium mangrovi	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae → Microbacterium → Microbacterium mangrovi	2.33 %
Amycolatopsis mediterranei	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Amycolatopsis → Amycolatopsis mediterranei	1.55 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.55 %
Unclassified	root	N/A	1.55 %
unclassified Microbacterium	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae → Microbacterium → unclassified Microbacterium	0.78 %
unclassified Williamsia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Williamsia → unclassified Williamsia	0.78 %
unclassified Solirubrobacter	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → unclassified Solirubrobacter	0.78 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.78 %

Name	Rank	Taxonomy	Distribution
Microbacterium mangrovi	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae → Microbacterium → Microbacterium mangrovi	2.33 %
Amycolatopsis mediterranei	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Amycolatopsis → Amycolatopsis mediterranei	1.55 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.55 %
Unclassified	root	N/A	1.55 %
Microbacterium sp. UNC423CL45Tsu	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae → Microbacterium → unclassified Microbacterium → Microbacterium sp. UNC423CL45Tsu	0.78 %
Williamsia sp. D3	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Williamsia → unclassified Williamsia → Williamsia sp. D3	0.78 %
Solirubrobacter sp. URHD0082	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → unclassified Solirubrobacter → Solirubrobacter sp. URHD0082	0.78 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.78 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2199352024\|deeps__Contig_186877	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2683	Open in IMG/M
3300000033\|ICChiseqgaiiDRAFT_c2358917	All Organisms → cellular organisms → Bacteria → Proteobacteria	934	Open in IMG/M
3300000597\|AF_2010_repII_A1DRAFT_10080508	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	816	Open in IMG/M
3300000787\|JGI11643J11755_11332695	All Organisms → cellular organisms → Bacteria → Terrabacteria group	518	Open in IMG/M
3300000956\|JGI10216J12902_102193310	All Organisms → cellular organisms → Bacteria	2721	Open in IMG/M
3300000956\|JGI10216J12902_115283510	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	1034	Open in IMG/M
3300001431\|F14TB_102550862	All Organisms → cellular organisms → Bacteria → Terrabacteria group	780	Open in IMG/M
3300004114\|Ga0062593_100719651	All Organisms → cellular organisms → Bacteria → Terrabacteria group	977	Open in IMG/M
3300004114\|Ga0062593_101457137	All Organisms → cellular organisms → Bacteria	735	Open in IMG/M
3300004463\|Ga0063356_100214275	All Organisms → cellular organisms → Bacteria	2289	Open in IMG/M
3300004479\|Ga0062595_100873135	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	753	Open in IMG/M
3300005093\|Ga0062594_100898608	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	836	Open in IMG/M
3300005093\|Ga0062594_102481146	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Williamsia → unclassified Williamsia → Williamsia sp. D3	569	Open in IMG/M
3300005172\|Ga0066683_10347877	All Organisms → cellular organisms → Bacteria	920	Open in IMG/M
3300005178\|Ga0066688_10277974	All Organisms → cellular organisms → Bacteria	1076	Open in IMG/M
3300005179\|Ga0066684_10247182	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1170	Open in IMG/M
3300005294\|Ga0065705_10239991	All Organisms → cellular organisms → Bacteria	1225	Open in IMG/M
3300005327\|Ga0070658_10000278	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	44894	Open in IMG/M
3300005332\|Ga0066388_100078155	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3662	Open in IMG/M
3300005332\|Ga0066388_100209823	All Organisms → cellular organisms → Bacteria	2573	Open in IMG/M
3300005332\|Ga0066388_100433721	All Organisms → cellular organisms → Bacteria	1957	Open in IMG/M
3300005332\|Ga0066388_102295836	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	976	Open in IMG/M
3300005332\|Ga0066388_105517633	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae → Microbacterium → unclassified Microbacterium → Microbacterium sp. UNC423CL45Tsu	641	Open in IMG/M
3300005344\|Ga0070661_100063510	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2712	Open in IMG/M
3300005437\|Ga0070710_10945454	All Organisms → cellular organisms → Bacteria → Terrabacteria group	625	Open in IMG/M
3300005534\|Ga0070735_10177233	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1312	Open in IMG/M
3300005539\|Ga0068853_100787311	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	910	Open in IMG/M
3300005542\|Ga0070732_10238096	All Organisms → cellular organisms → Bacteria	1089	Open in IMG/M
3300005544\|Ga0070686_101563707	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Amycolatopsis → Amycolatopsis mediterranei	557	Open in IMG/M
3300005552\|Ga0066701_10109780	All Organisms → cellular organisms → Bacteria	1621	Open in IMG/M
3300005554\|Ga0066661_10352273	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	901	Open in IMG/M
3300005556\|Ga0066707_10290142	All Organisms → cellular organisms → Bacteria	1071	Open in IMG/M
3300005557\|Ga0066704_10254951	All Organisms → cellular organisms → Bacteria	1191	Open in IMG/M
3300005559\|Ga0066700_10938510	All Organisms → cellular organisms → Bacteria → Terrabacteria group	573	Open in IMG/M
3300005560\|Ga0066670_10525252	All Organisms → cellular organisms → Bacteria → Terrabacteria group	725	Open in IMG/M
3300005563\|Ga0068855_100532847	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1273	Open in IMG/M
3300005576\|Ga0066708_10802634	All Organisms → cellular organisms → Bacteria → Terrabacteria group	590	Open in IMG/M
3300005586\|Ga0066691_10499631	All Organisms → cellular organisms → Bacteria	727	Open in IMG/M
3300005598\|Ga0066706_11248758	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	563	Open in IMG/M
3300005713\|Ga0066905_102271827	All Organisms → cellular organisms → Bacteria → Terrabacteria group	507	Open in IMG/M
3300005764\|Ga0066903_100012638	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	8305	Open in IMG/M
3300005764\|Ga0066903_100074861	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	4367	Open in IMG/M
3300005764\|Ga0066903_100216332	All Organisms → cellular organisms → Bacteria	2896	Open in IMG/M
3300005764\|Ga0066903_100429915	All Organisms → cellular organisms → Bacteria	2192	Open in IMG/M
3300005764\|Ga0066903_101640482	All Organisms → cellular organisms → Bacteria	1221	Open in IMG/M
3300005764\|Ga0066903_103799699	All Organisms → cellular organisms → Bacteria	811	Open in IMG/M
3300005764\|Ga0066903_104364767	All Organisms → cellular organisms → Bacteria	755	Open in IMG/M
3300005764\|Ga0066903_106426384	All Organisms → cellular organisms → Bacteria	613	Open in IMG/M
3300005764\|Ga0066903_106496452	All Organisms → cellular organisms → Bacteria → Terrabacteria group	609	Open in IMG/M
3300006031\|Ga0066651_10259461	All Organisms → cellular organisms → Bacteria → Terrabacteria group	922	Open in IMG/M
3300006032\|Ga0066696_10356572	All Organisms → cellular organisms → Bacteria → Terrabacteria group	953	Open in IMG/M
3300006046\|Ga0066652_100105536	All Organisms → cellular organisms → Bacteria	2282	Open in IMG/M
3300006046\|Ga0066652_101022964	All Organisms → cellular organisms → Bacteria	784	Open in IMG/M
3300006755\|Ga0079222_10665452	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	814	Open in IMG/M
3300006903\|Ga0075426_11325633	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Amycolatopsis → Amycolatopsis mediterranei	546	Open in IMG/M
3300009012\|Ga0066710_101217504	All Organisms → cellular organisms → Bacteria	1167	Open in IMG/M
3300009012\|Ga0066710_102780316	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	693	Open in IMG/M
3300009088\|Ga0099830_10331665	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1220	Open in IMG/M
3300009093\|Ga0105240_11198118	All Organisms → cellular organisms → Bacteria → Terrabacteria group	804	Open in IMG/M
3300009137\|Ga0066709_100261225	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2326	Open in IMG/M
3300009137\|Ga0066709_102427691	All Organisms → cellular organisms → Bacteria → Terrabacteria group	711	Open in IMG/M
3300009148\|Ga0105243_11344702	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	733	Open in IMG/M
3300009162\|Ga0075423_11455624	All Organisms → cellular organisms → Bacteria → Terrabacteria group	734	Open in IMG/M
3300010043\|Ga0126380_10579184	All Organisms → cellular organisms → Bacteria	879	Open in IMG/M
3300010043\|Ga0126380_11307862	All Organisms → cellular organisms → Bacteria → Terrabacteria group	631	Open in IMG/M
3300010046\|Ga0126384_11661940	All Organisms → cellular organisms → Bacteria → Terrabacteria group	603	Open in IMG/M
3300010047\|Ga0126382_11527051	All Organisms → cellular organisms → Bacteria → Terrabacteria group	616	Open in IMG/M
3300010047\|Ga0126382_11709972	All Organisms → cellular organisms → Bacteria → Terrabacteria group	588	Open in IMG/M
3300010303\|Ga0134082_10467561	All Organisms → cellular organisms → Bacteria → Terrabacteria group	547	Open in IMG/M
3300010323\|Ga0134086_10433723	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae → Microbacterium → Microbacterium mangrovi	534	Open in IMG/M
3300010337\|Ga0134062_10116838	All Organisms → cellular organisms → Bacteria	1159	Open in IMG/M
3300010360\|Ga0126372_12529785	All Organisms → cellular organisms → Bacteria → Terrabacteria group	564	Open in IMG/M
3300010362\|Ga0126377_10230557	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1792	Open in IMG/M
3300010366\|Ga0126379_10067722	All Organisms → cellular organisms → Bacteria	3029	Open in IMG/M
3300010366\|Ga0126379_10581201	All Organisms → cellular organisms → Bacteria	1203	Open in IMG/M
3300010366\|Ga0126379_12566233	All Organisms → cellular organisms → Bacteria → Terrabacteria group	608	Open in IMG/M
3300010371\|Ga0134125_11363096	All Organisms → cellular organisms → Bacteria	773	Open in IMG/M
3300010396\|Ga0134126_10247392	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → unclassified Solirubrobacter → Solirubrobacter sp. URHD0082	2111	Open in IMG/M
3300010398\|Ga0126383_10093432	All Organisms → cellular organisms → Bacteria	2665	Open in IMG/M
3300011270\|Ga0137391_10145602	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2063	Open in IMG/M
3300012096\|Ga0137389_10150195	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1906	Open in IMG/M
3300012189\|Ga0137388_10341873	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1378	Open in IMG/M
3300012200\|Ga0137382_10116781	All Organisms → cellular organisms → Bacteria	1778	Open in IMG/M
3300012200\|Ga0137382_11101629	All Organisms → cellular organisms → Bacteria	567	Open in IMG/M
3300012204\|Ga0137374_10349589	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1193	Open in IMG/M
3300012207\|Ga0137381_11113443	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	679	Open in IMG/M
3300012209\|Ga0137379_10565557	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1044	Open in IMG/M
3300012356\|Ga0137371_10398945	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1066	Open in IMG/M
3300012359\|Ga0137385_10413556	All Organisms → cellular organisms → Bacteria	1149	Open in IMG/M
3300012948\|Ga0126375_10802945	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae → Microbacterium → Microbacterium mangrovi	745	Open in IMG/M
3300012971\|Ga0126369_10916153	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	962	Open in IMG/M
3300012971\|Ga0126369_12315181	All Organisms → cellular organisms → Bacteria → Terrabacteria group	624	Open in IMG/M
3300012976\|Ga0134076_10560890	All Organisms → cellular organisms → Bacteria → Terrabacteria group	529	Open in IMG/M
3300012989\|Ga0164305_10820123	All Organisms → cellular organisms → Bacteria → Terrabacteria group	774	Open in IMG/M
3300015357\|Ga0134072_10283447	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae → Microbacterium → Microbacterium mangrovi	611	Open in IMG/M
3300018433\|Ga0066667_11022832	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	713	Open in IMG/M
3300018433\|Ga0066667_11103625	All Organisms → cellular organisms → Bacteria → Terrabacteria group	687	Open in IMG/M
3300018433\|Ga0066667_11493241	All Organisms → cellular organisms → Bacteria → Terrabacteria group	597	Open in IMG/M
3300018482\|Ga0066669_11836022	All Organisms → cellular organisms → Bacteria → Terrabacteria group	561	Open in IMG/M
3300020021\|Ga0193726_1086765	All Organisms → cellular organisms → Bacteria	1435	Open in IMG/M
3300021560\|Ga0126371_10954183	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1000	Open in IMG/M
3300025906\|Ga0207699_10574768	All Organisms → cellular organisms → Bacteria → Terrabacteria group	819	Open in IMG/M
3300025909\|Ga0207705_10000590	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	30474	Open in IMG/M
3300025914\|Ga0207671_10314600	All Organisms → cellular organisms → Bacteria	1238	Open in IMG/M
3300025916\|Ga0207663_10556302	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	897	Open in IMG/M
3300025919\|Ga0207657_11038449	All Organisms → cellular organisms → Bacteria → Terrabacteria group	628	Open in IMG/M
3300025932\|Ga0207690_11876755	All Organisms → cellular organisms → Bacteria → Terrabacteria group	500	Open in IMG/M
3300025945\|Ga0207679_11618891	All Organisms → cellular organisms → Bacteria → Terrabacteria group	593	Open in IMG/M
3300025949\|Ga0207667_11657626	All Organisms → cellular organisms → Bacteria → Terrabacteria group	607	Open in IMG/M
3300026078\|Ga0207702_12041126	All Organisms → cellular organisms → Bacteria → Terrabacteria group	563	Open in IMG/M
3300026095\|Ga0207676_10222858	All Organisms → cellular organisms → Bacteria	1680	Open in IMG/M
3300026295\|Ga0209234_1068306	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1352	Open in IMG/M
3300026309\|Ga0209055_1226860	All Organisms → cellular organisms → Bacteria → Terrabacteria group	573	Open in IMG/M
3300026325\|Ga0209152_10271234	All Organisms → cellular organisms → Bacteria	631	Open in IMG/M
3300026530\|Ga0209807_1067173	All Organisms → cellular organisms → Bacteria	1613	Open in IMG/M
3300026550\|Ga0209474_10073351	All Organisms → cellular organisms → Bacteria	2370	Open in IMG/M
3300027766\|Ga0209796_10167309	All Organisms → cellular organisms → Bacteria → Terrabacteria group	693	Open in IMG/M
3300027842\|Ga0209580_10291117	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	813	Open in IMG/M
3300027894\|Ga0209068_10214896	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1061	Open in IMG/M
3300027986\|Ga0209168_10177528	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1072	Open in IMG/M
3300028784\|Ga0307282_10372808	All Organisms → cellular organisms → Bacteria → Terrabacteria group	691	Open in IMG/M
3300028881\|Ga0307277_10027534	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2251	Open in IMG/M
3300031170\|Ga0307498_10047671	All Organisms → cellular organisms → Bacteria	1145	Open in IMG/M
3300031199\|Ga0307495_10234220	All Organisms → cellular organisms → Bacteria → Terrabacteria group	521	Open in IMG/M
3300031938\|Ga0308175_100461971	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1341	Open in IMG/M
3300031996\|Ga0308176_10135143	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2233	Open in IMG/M
3300033412\|Ga0310810_11060382	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	682	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	85.27%
Host-Associated	Host-Associated	14.73%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	84.50%
Plants	Host-Associated → Plants	14.73%
Aquatic	Environmental → Aquatic	0.78%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	84.50%
Rhizosphere	Host-Associated → Plants → Rhizosphere	9.30%
Rhizoplane	Host-Associated → Plants → Rhizoplane	4.65%
Sediment	Environmental → Aquatic → Sediment	0.78%
Phylloplane	Host-Associated → Plants → Phylloplane	0.78%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	68.99%
Loam	Environmental → Terrestrial → Soil → Loam	15.50%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	4.65%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	4.65%
Soil	Host-Associated → Plants → Rhizosphere → Soil	4.65%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.78%
Unclassified	Host-Associated → Plants → Phylloplane → Unclassified	0.78%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	36.43%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	25.58%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	11.63%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	4.65%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	4.65%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	4.65%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	4.65%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	3.10%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	1.55%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.78%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	0.78%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.78%
Unclassified	Host-Associated → Plants → Phylloplane → Unclassified → Unclassified	0.78%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	18.60%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	12.40%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	11.63%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	8.53%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	6.98%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	5.43%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	4.65%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	3.10%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	3.10%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	3.88%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	3.88%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.33%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	2.33%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.55%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	1.55%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	1.55%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.78%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.78%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	0.78%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.78%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.78%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.78%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.78%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.78%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	0.78%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.78%
Agave	Host-Associated → Plants → Phylloplane → Unclassified → Unclassified → Agave	0.78%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2199352024	Bare-fallow DEEP SOIL	Environmental	Open in IMG/M
3300000033	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000597	Forest soil microbial communities from Amazon forest - 2010 replicate II A1	Environmental	Open in IMG/M
3300000787	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300001431	Amended soil microbial communities from Kansas Great Prairies, USA - BrdU F1.4TB clc assemly	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005172	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132	Environmental	Open in IMG/M
3300005178	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137	Environmental	Open in IMG/M
3300005179	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133	Environmental	Open in IMG/M
3300005294	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk Soil	Environmental	Open in IMG/M
3300005327	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG	Host-Associated	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005344	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG	Host-Associated	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005534	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen07_05102014_R1	Environmental	Open in IMG/M
3300005539	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2	Host-Associated	Open in IMG/M
3300005542	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1	Environmental	Open in IMG/M
3300005544	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG	Environmental	Open in IMG/M
3300005552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150	Environmental	Open in IMG/M
3300005554	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110	Environmental	Open in IMG/M
3300005556	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156	Environmental	Open in IMG/M
3300005557	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153	Environmental	Open in IMG/M
3300005559	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149	Environmental	Open in IMG/M
3300005560	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_119	Environmental	Open in IMG/M
3300005563	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2	Host-Associated	Open in IMG/M
3300005576	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157	Environmental	Open in IMG/M
3300005586	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140	Environmental	Open in IMG/M
3300005598	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006031	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Angelo_100	Environmental	Open in IMG/M
3300006032	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145	Environmental	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006903	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5	Host-Associated	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009093	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG	Host-Associated	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010303	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09182015	Environmental	Open in IMG/M
3300010323	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010337	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09082015	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012204	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012356	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG	Environmental	Open in IMG/M
3300012359	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300012976	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_0_1 metaG	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300015357	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_5_0_1 metaG	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300020021	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2c1	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300025906	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025909	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025914	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025919	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025932	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025945	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025949	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026078	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026095	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026295	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_20cm (SPAdes)	Environmental	Open in IMG/M
3300026309	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110 (SPAdes)	Environmental	Open in IMG/M
3300026325	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107 (SPAdes)	Environmental	Open in IMG/M
3300026530	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154 (SPAdes)	Environmental	Open in IMG/M
3300026550	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145 (SPAdes)	Environmental	Open in IMG/M
3300027766	Agave microbial communities from Guanajuato, Mexico - Or.Sf.rz (SPAdes)	Host-Associated	Open in IMG/M
3300027842	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027894	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012 (SPAdes)	Environmental	Open in IMG/M
3300027986	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen07_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300028784	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_121	Environmental	Open in IMG/M
3300028881	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_116	Environmental	Open in IMG/M
3300031170	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 12_S	Environmental	Open in IMG/M
3300031199	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 7_S	Environmental	Open in IMG/M
3300031938	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R1	Environmental	Open in IMG/M
3300031996	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R2	Environmental	Open in IMG/M
3300033412	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NC	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
deeps_03526000	2199352024	Soil	MRTEAELSELVACTLNGTDLKSQRERWINVGTNFGRSREEADDGLRLVYDDHPAVEAELHALVAVENECCSWALWSVERENGSLVMAARSRGEGIGTLHTMFHEAMPAADR
ICChiseqgaiiDRAFT_23589172	3300000033	Soil	MTTKTTAAHELSELVACTLNDTDLKSQRDRWLNLGEHFGIARKQTEDGLRITFKDHPAVAVELQALVAVENECXSWATWSVXGEDGALVMAARSEGEGVVTLHGMFTAAIPAN*
AF_2010_repII_A1DRAFT_100805082	3300000597	Forest Soil	MAVHDAPPRSEAELSELVACTLIDTDLKTQRERWINLGTNFGRGREETADGLRLLFDSHPGVEGELRALVAVENDCCSWASWSVEHHDNTLVMAARSQGEGITALHGMFHEAMPSV*
JGI11643J11755_113326952	3300000787	Soil	MTTKTTAAHELSELVACTLNDTDLKSQRDRWLNLGEHFGIARKQTEDGLRITFKDHPAVTVELQALVAVENECCSWATWSVEGEDGALVMAARSEGEGVVTLHGMFTAAIPAN*
JGI10216J12902_1021933103	3300000956	Soil	MTVHRSNASAERELSELVACTLNDTDLKSQRERWVNMGENFGIARSSTSGGVRLTFRDHPAVAAELQALVEVENRCCSWARWTVERDAGGALVVVVRSQGEGIAALHAMFADASAST*
JGI10216J12902_1152835101	3300000956	Soil	MSTQSMDPAAENELSELVACTLIDADLKTQRERWINLGANFGLGRYEIDEGLRLTFRDHPAVEAELRALVAVENECCSWADWSVERDEEGALVMAARSQDDGIAALHGMFTSATPWSRHQDR*
F14TB_1025508621	3300001431	Soil	MPTKSTAARELSELVACTLNDTNLKSQRDRWLNLGKHFGIARKQTADGLRITFKDHHAVAVELEALVAVENECCSWAAWSVEREHGALAMAARSKGEGVVVLHGMFTAAIPAN*
Ga0062593_1007196512	3300004114	Soil	VAIDQTNLTAEHELADLVACTLSDTDLKTQRERWINVGTNFGIGREKRDDGLQLSFKDHPAVEQELRALVAVENDCCSWASWSVERKEGALVVAARSKGEGVSTLHGMFKEAMPSV*
Ga0062593_1014571372	3300004114	Soil	GEGEEAFVDVVAAVGADDSLTDTDLKTERERWISLSENFGRGRYETTDGLRLTFKAHPAVEAELQALVEVENECCSWAAWTVERSEDGSLVMAARSLDDGIAALHGMFTSATPWTRREDR
Ga0063356_1002142754	3300004463	Arabidopsis Thaliana Rhizosphere	MTTKTTEAHELSELVACTLNDTGLKSQRDRWLNLGEHFGIARKQTEDGLRITFKDHPAVAVELQALVAVENECCSWATWSVEGEDGALVMAARSEGEGVVTLHGMFTAAIPAN*
Ga0062595_1008731352	3300004479	Soil	MASDELSAVVACTLVDTELKTQRERWIDLGLNFGLDREETGDGLRLTYRSHPAVERELQELVAVESQCCSWASWSVEHEGADVLALAARSQGEGIAALHGMFKEAMPAAPAV*
Ga0062594_1008986082	3300005093	Soil	MTARGVTQRSDHDLSELVACTLNATNLKTQRERWINLGTNFGRGRETTDDGLRLLFENHTAVESELRALVAVENDCCSWAAWSVEHEDGILVMAARSRGEGIHTLHGMFREAIPSTSLGDR*
Ga0062594_1024811461	3300005093	Soil	MTTQGVTQRSDHALAELVACTLNDTDLKTQRERWINLGANFGRGRETTDDGLRLLFESHAAVESELRALVAVENDCCSWAAWSVEHEVGMLVVTARSRGEGILTLHGMFREAMPSTSACDS*
Ga0066683_103478771	3300005172	Soil	MTTQNLDELSELVACTLIDTDLKTQRERWINLGENFGIARHETAHGLRLTFKDHPAVAAELEALVQVENDCCSWAAWTVERSEDSALVMAARSQGEGIATLHGMFTS*
Ga0066688_102779742	3300005178	Soil	MTTPSTQAAAEHELSELVACTLIDTDLKTQRERWINLGENFGLGRYETDDGLRLTFKDHPAVEAELQALVEVENECCSWAVWSIERGKDGALVMAARAQDDGIAALHGMFTSATPWSRRQDR*
Ga0066684_102471821	3300005179	Soil	MTTQNADATAERELSDLVACMLNDTNLKTQQERWIILGESFGTGRFETADGLRLTFKDHPAVVAELQALVAAENECCSWAAWTVERGEDGAPAMAARSQGEGIAALHGMFTSATPWTKDCRGC*
Ga0065705_102399913	3300005294	Switchgrass Rhizosphere	ELSELVACTLNDTGLKSQRDRWLNLGEHFGIARKQTEDGLRITFKDHPAVAVELQALVAVENECCSWATWSVEGEDGALVMAARSEGEGVVTLHGMFTAAIPAN*
Ga0070658_1000027833	3300005327	Corn Rhizosphere	MTARAEFRPSEPELSELVACTLTDSGLKTQQERWTTLCENFGISRIVTDDGLGLTFRHHPQVAAELLALVDVENACCGWASWAVERDADGSLVMAARSQADGVATLHSMFIQAGPWRDG*
Ga0066388_1000781553	3300005332	Tropical Forest Soil	MTAQGVTGRSETELSALVACTLNESDLKTQRERWVNLGTNFGRGREATDDGLRLLFDNHPAVENELRGLVAVENDCCSWAAWSVEHEDGMLVMAARSRGEGIVTLHGMFREAMPSTSICDG*
Ga0066388_1002098234	3300005332	Tropical Forest Soil	MSTQSMDPAAESELSELVACTLIDTDLKTQQERWIDLGENFGLGRYETDDGLRLTFRDHPAVEAELRALVAVENECCSWASWRIERDGGGALVMAARSQDNGIAALHGMFTNAAPWSRRQDT*
Ga0066388_1004337213	3300005332	Tropical Forest Soil	MAVQRAAARSKAELSELVACTLNGTDLKGQRERWINVGTNFGRSREETDEGLRLLFDDHPAIETELEALVSVENECCSWASWAVEREDGVLVMAARSRGEGIATLHTMFREAMPSA*
Ga0066388_1022958361	3300005332	Tropical Forest Soil	MAALGALPVLPGPEAELSKLVACTLNDTDHKTQRERWINLGTNFGRGRETTDDGLRLLFDSHPAVESELRALVAVENDCCSWASWSVEHHDGALVMVARSEGEGTTTLHGMFREAMPSA*
Ga0066388_1055176331	3300005332	Tropical Forest Soil	ACTLIDTDLKTQRERWISLGENFGLGRFETDDGLRLTFKDHRAVEAELQALVAVENECCSWAAWSVERGGDGGLVMAARSQGDGIAALHGMFTSATPWSRRQHR*
Ga0070661_1000635103	3300005344	Corn Rhizosphere	MTTRIGKALSAVELDELVACTLIEANLRTQRERWISLGENFGLARIPTDDGLRLTFTFHPQVEAELHALVAVENDCCAWASWTVERDKDGALAMVARSHADGVATLHTMFTEAEPWRSDS
Ga0070710_109454542	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	EAMTTRIGKALSAAELDELVACTLIEANLRTQRERWISLGENFGLARIPTDDGLRLTFTFHPQVEAELHALVAVENDCCAWASWTVERDKDGALAMVARSHADGVATLHTMFTEAEPWRSDS*
Ga0070735_101772331	3300005534	Surface Soil	MATQHLNAAADRELSELVACTLNETNLKTQRERWINLGENFGIARHETADGLHLTFINHPAVAAELEALVQVENDCCAWAAWTVERGDDGTLVMAARSTGDGIATLHGMFTTEATPWRGTCESC*
Ga0068853_1007873111	3300005539	Corn Rhizosphere	ACTLIEANLRTQRERWISLGENFGLARIPTDDGLRLTFTFHPQVEAELHALVAVENDCCAWASWTVERDKDGALAMVARSHADGVATLHTMFTEAEPWRSDS*
Ga0070732_102380963	3300005542	Surface Soil	VAISETSPRAEHELAELVACTLSDTDLKTQRERWINVGTNFGLAREKTDDGLQLTFKDHPAIEQELRALVAVENDCCSWASWSVDRKEGVLVMAARSKGEGISTLHGMFGEAMPAATHVDI*
Ga0070686_1015637071	3300005544	Switchgrass Rhizosphere	MTTRIGKALSAAELDELVACTLIEANLRTQRERWISLGENFGLARIPTDDGLRLTFTFHPQVEAELHALVAVENDCCAWASWTVERDKDGALAMVARSHA
Ga0066701_101097803	3300005552	Soil	MTTPSTHEAAEHELSELVACTLIDTDLKTQRERWINLGENFGLGRYETDDGLRLTFKDHPAVKAELQALVAVENECCSWAAWGIERGEDGAIVMAAHSQDDGIAALHGMFTSATPWSRHQNH*
Ga0066661_103522731	3300005554	Soil	MTTQSMDAAAEHELSELVACTLIDTDLKTQRERWINLGENFGLGRYETDDGLRLTFKDHPAVEAELQALVEVENECCSWAAWSIERGKDGALVMAARSQDDGIAALHGMFTSATPWSRRQHR*
Ga0066707_102901422	3300005556	Soil	MTTASTQAAAEHELSELVACTLIDTDLKTQRERWISLGENFGLGRHETDEGLRLTFKDHPAVEAELEALVAVENECCSWAAWSIERGEDGSLVMAARSQDDGIAALHAMFTSATPRSRRQDP*
Ga0066704_102549512	3300005557	Soil	MTTTGERELSELVACTLNDTNLKTQRERWINLGENFGIARYEAPDGLRLTFEDHPAVAAELRALVQVENECCSWASWNVERSEDGALVMAARSQGEGIATFHGMFTSAIAWKPRP*
Ga0066700_109385101	3300005559	Soil	VATQHLDAAADRELSELVACTLNDTNLKTQRERWINLGENFGIARHETPDGLCLTFKDHPAVAAELEALVQVENDCCSWAAWTVERSEDGALVMAARSQGEGIATLHGMFTKEATPWTSSSEC*
Ga0066670_105252521	3300005560	Soil	MTTKSMDVAARRELSELVACTLIDTDLKTQRERWLNLGGNFGLGRYETDDGLRLTFKDHTAVEAELQALVAVENECCSWAAWSIERDEDGAVVMAARAQGDGIAALHGMFTSATPWSRRQDR*
Ga0068855_1005328472	3300005563	Corn Rhizosphere	MTTRIGKALSAAELNELVACTLIEANLRTQRERWISLGENFGLARIPTDDGLRLTFTFHPQVEAELQALVAVENDCCAWASWTVERDKDGALAMVARSHADGVATLHTMFTEAEPWRSDS
Ga0066708_108026342	3300005576	Soil	VTTPSTHAAAEHELSELVACTLIDTDLKTQRERWINLGENFGLGRYETDDGLRLTFKDHPAVEAELQALVGVENECCSWAAWSIERDEDGAVVMAARAQGDGIAALHGMFTNATPWSRREDR*
Ga0066691_104996312	3300005586	Soil	MTTPSTQAAAEHELSELVACTLIDTDLKTQRERWINLGENFGLGRYETDDGLRLTFRDHPAVEAELQALVAVKNECCGWAAWSIERGKDGALVMAARSQDDGIAALHGMFTSATPWSRRQDR*
Ga0066706_112487581	3300005598	Soil	MTTKSMDAAATRELSELVACTLIDTDLKTQRERWSNLGENFGLGRHETADGLRLTFTDHAAVEAELQALVGVENECCSWAAWSIERDEDGALVMAARAQGEGIAALHGMFTSATPWSRRGGSLEA*
Ga0066905_1022718271	3300005713	Tropical Forest Soil	VAIDQTSLTAEHELAELVGCTLSDTSLKTQRERWISVGTNFGISRKKTDDGLQLTFKYHPAVEQELRALVAVENDCCRWASWSVERKEGALLMAARSKGEGVSTLHGMFKEAMPSV*
Ga0066903_1000126387	3300005764	Tropical Forest Soil	MAALGALPVLPGPEAELSKLVACTLNDTDHKTQRERWINLGTNFGRGRETTDDGLRLLFDGHPAVESELRALVAVENDCCSWASWSVEHHDGALVMVARSEGEGTTTLHGMFREAMPSA*
Ga0066903_1000748612	3300005764	Tropical Forest Soil	MAVQDATPRSEAELSELVACTLNDKDLKTQRERWINLGTNFGRGRETTEDGLRLLFDSHPAVESELRALVAVERNCCSWASWSVEHHDGALVMVARSQGEGITTLHGMFREAMPSG*
Ga0066903_1002163323	3300005764	Tropical Forest Soil	VATSETGPRAEQELAELVACTLSDTELKTQRERWINVGTNFGLAREMTGDGLQLTFKDHPAVEQELRALVAVENECCSWASWSVDRMDGVVVMAARSKGEGISTLHGMFKEAMPAAAHGDSEGE*
Ga0066903_1004299152	3300005764	Tropical Forest Soil	VAISETSPSAAHELAELVACTLSDTDLKTQRERWINVGTNFGLAREATGDGLQLTFKDHPAVEQELRALVAVENHCCSWASWSVDRKEGVLVMAARSKGEGISTLHGMFKEAMPAAAHGDSSGE*
Ga0066903_1016404821	3300005764	Tropical Forest Soil	VAIDQTNPTAEHDLAELVACTLSDTDLKTQRERWINVGTNFGTAREKTADGLQLSFKDHPAVEQELRALVAVENDCCSWASWSVERKEGALIMAARSKGEGVSTLHGMFREAIPSG*
Ga0066903_1037996992	3300005764	Tropical Forest Soil	VPISETRTRAEPELVACTLSDADLKTQRERWMNVGRNFGLARVETGDGLQVTFKDHPAVERELRALVAVENDCCSWASWSVERREGVLVMAARSRGEGISTLHGMFKEAVAAAHGAS*
Ga0066903_1043647673	3300005764	Tropical Forest Soil	MGGSAMTAQGVRGRSKAELSELVACTLDDTNLKTQRERWINLGTTFGRGRETTDDGLRLLFDNHSAVESELRALVAVENDCCSWAAWSVEHEDGMLVMAARSRGDGIVTLHGMFREAMPSPSISDC*
Ga0066903_1064263841	3300005764	Tropical Forest Soil	MAVQDAVLRSEAELSELVACTLNDTDLKTQRERWINLGTNFGRGRETTDDGLRLLFDSHPAVESELRAVVAVENDCCSWASWSVEHHDGALVMAARSQGEGITTLHGMFREAMPFA*
Ga0066903_1064964521	3300005764	Tropical Forest Soil	MTAQPGQRTEAELSELVACTLKATDLKSQRERWIDLGTNFGRSREETEDGLRLIFTDHPAIETELQALVAVENECCTWAAWSVEREDGALVMSARSHGEGVATLHTMFHEAMPTAQ*
Ga0066651_102594611	3300006031	Soil	ILDIKSTLTSILPSSRCTTARKEWMVTTPSTHAAAEHELSELVACTLIDTDLKTQRERWINLGENFGLGRYETDDGLRLTFKDHAAVEAELQALVAVENECCSWAAWSVERGKDGALVMAARSQDDGIAALHGMFTSATPWSRRQDR*
Ga0066696_103565722	3300006032	Soil	MTTAAERELSELVACTLTNTNLKTQRDRWINLRENFGIGRRETADGLHLTFRDHPTVAAELRALVDVENECCSWASWNVEPSEDGALVMTARSQGEGIATLHGMFTSASGDARVPAG*
Ga0066652_1001055362	3300006046	Soil	MAVQKATPRSEAELSELVACTLNDTDLKTQRERWINVGTNFGRSREETDDGLRLLFDDHPAIETELGALVAVENECCSWASWAVEREDGVLVMAARSRGEGIATLHTMFHEAMPAVSSHDGP*
Ga0066652_1010229641	3300006046	Soil	MTTPSTQAAAEHELSELVACTLIDTDLKTQRERWINLGENFGLGRYETDDGLRLTFKDHAAVEAELQALVAVENECCSWAAWSIERDEDGALVMAARARGDGIAALHGMFTSATPWSRRQDR*
Ga0079222_106654522	3300006755	Agricultural Soil	ELDELVACTLIEANLRTQRERWISLGENFGLARIPTDDGLRLTFTFHPQVEAELHALVAVENDCCAWASWTVERDKDGALAMVARSHADGVATLHTMFTEAEPWRSDS*
Ga0075426_113256331	3300006903	Populus Rhizosphere	MTTRIGKALSAAELNELVACLLTEANLKTQRERWISLGENFGLARIPTDDGLRLTFTFHPQVEAELHALVAVENDCCAWASWTVERDKDGALAMVARSHADGVATLHTMF
Ga0066710_1012175042	3300009012	Grasslands Soil	MTTPSTRAAAEHELSELVACTLIDTDLKTQRERWINLGENFGLGRYETDDGLRLTFRDHPAVEAELQALVEVENECCSWAVWSIERGKDGALVMAARAQDDGIAALHGMFTSATPWSRRQDR
Ga0066710_1027803161	3300009012	Grasslands Soil	MTTTGERELSELVACTLNDTNLKTQRERWINLGENFGIARYEAPDGLRLTFEDHPAVAAELRALVEVENECCSWASWNVERSEDGALVMAGRSQGEGIATLHGMFTSAIAWKPRPW
Ga0099830_103316652	3300009088	Vadose Zone Soil	MAIQHLDAAADRELSELVACTLNETNLKTQRERWINLGENVGIARHETADGLLLTFKDHPAVAAELEALVQVENDCCSWAAWTVERDEDGTLVMAAHSQGEGIATLHGMFTKEATPWKSGSEC*
Ga0105240_111981183	3300009093	Corn Rhizosphere	MTARSEFWPSEQELSQRLACTLTDTGLKTQQERWTTLCENFGISRIVTDDGLRLTFRHHPQVAAELLALVDVENACCGWASWAVERDADGSLVMAARSQADGVATLHSMFIQAGPWRDG*
Ga0066709_1002612254	3300009137	Grasslands Soil	MMTTTGERELSELVACTLNDTNLKTQRERWINLGENFGIARYEAPDGLRLTFEDHPAVAAELRALVQVENECCSWASWNVERSEDGALVMAARSQGEGIATLHGMFTSAIAWKPRP*
Ga0066709_1024276912	3300009137	Grasslands Soil	MDAAAEHELSELVACTLIDTDLKTQRERWINLGEHFGLARYETADGLRLTFRDHAAVETELRALVAVESECCSWAAWSIERGEDGALTMAARSQDEGIAALHGMFTCATPWKSGRQDREALEPRV*
Ga0105243_113447022	3300009148	Miscanthus Rhizosphere	MTTKTTEAHELSKLVACTLNDTGLKSQRDRWRNLGEHFGLARKQTEDGLRITFTDHPAVAVELQALVAVENECCSWATWNVEREDGALVMAARSEGEGVVTLHRMFTAAIPAN*
Ga0075423_114556242	3300009162	Populus Rhizosphere	MTTRIGKALPAAELDELVACTLIEANLRTQRERWISLGENFGLARIPTDDGLRLTFAFHPQVEAELHALVAVENDCCAWASWTVERDKDGALAMVARSHADGVATLHTMFTEAEPWRSDS
Ga0126374_110159371	3300009792	Tropical Forest Soil	MTARIGKALSAAELNELVACTLIEANLKTQRDRWISLGENFGLARIPTDDGLRLTFTFHPQVEAELHALVAVENDCCAWASWTVERDKD
Ga0126380_105791843	3300010043	Tropical Forest Soil	VAISETSPSAAHELAELVACTLSDTDLKTQRERWINVGTNFGLARETTGDGLQLTFKDHPAVEQELRALVAVENHCCSWASWSVDRKEGVLVMAARSKGEGISTLHGMFKEAMPAAAHGDSSGE*
Ga0126380_113078622	3300010043	Tropical Forest Soil	VPIDQTNPTAEQELAEVVACTLSDTDLKTQRERWINIGTNFGIGREKTDDGLQLTFNDHPAVEQELRALVAVENDCCSWASWSVERKEGALVMAAQSKGEGVSTLHGMFKEAMPSV*
Ga0126384_116619402	3300010046	Tropical Forest Soil	VPIDQTNLTAEQELGVLVACTLSDTDLKTQRERWINVGTNFGIGREKTDDGLQLTFKDHPAVEQELRALVAVENDCCSWASWSVERKEGALVMAAESNGEGVSTLHGMFKEAIPSV*
Ga0126382_115270511	3300010047	Tropical Forest Soil	MMSTQSIDPTAESELSELVACTLIDTDLKTQRERWINLGENFGLGRFETDDGLRLTFKDHPAVEAELEALVAVENECCSWADWSVERGGDGGLVMAARSQDDGIAALHGMFTSATPWSRRQDG*
Ga0126382_117099722	3300010047	Tropical Forest Soil	MGISDTIPTAEDELAELVACTLSDTDLKTQRERWINVGTNFGLAREQTADGLQLTFRDHPAVEQELRALVAVENECCSWASWSVDRTQGVLVMAARSQGEGVSTLHDMFKEAMPATARGEISRTYREAS*
Ga0134082_104675612	3300010303	Grasslands Soil	MVTTPSTHAAAEHELSELVACTLIDTDLKTQRERWINLGENFGLGRYETDDGLRLTFKNHPAVEAELQAHVAVENECCSWAAWSIERGEDGALVMAARSQDDGIAALHGMFTSATPWSRRQHR*
Ga0134086_104337231	3300010323	Grasslands Soil	MATQPMDSTPDRELSQLVACTLSDTSLKTQRERWIDLAETFGIARYETPDGLRLAFEDHPAVEAELQALVAVENDCCSWAAWTVERSETGALVLAARAQGEGIATLHGMFTSATPSP*
Ga0134062_101168384	3300010337	Grasslands Soil	LIDTDLKTQHERWINLGENFELGRYESADGLRLTFKDHAAVEAELQAVVAVENECCSWAAWSIERDEDGALVMAARAQGDGIAALHGMFTSATPWSRRQDR*
Ga0126372_125297852	3300010360	Tropical Forest Soil	MAALGALPVLPGPEAELSKLVACTLNDTGHKTQRERWINLGTNFGRGRETTDDGLRLLFDSHPAVESELRALVAVENDCCSWASWSVEHHDGALVMVARSEGEGTTTLHGMFREAMPSA*
Ga0126377_102305571	3300010362	Tropical Forest Soil	VEHELAELVACTLSDTDLKTQRERWINVGTNFGLAREQTATGLELTFRDHPAVEQELRALVAVENECCSWASWSVDRTQGVLVMAARSQGEGVSTLHDMFKEAMPATARGEISRTYREAS
Ga0126379_100677224	3300010366	Tropical Forest Soil	VATSETGPRAEQELAELVACTLSDTELKTQRERWINVGTNFGLAREMTGDGLQLTFEDHPAVEQELRALVAVENECCSWASWSVDRMDGVVVMAARSKGEGISTLHGMFKEAMPAAAHGDSEGE*
Ga0126379_105812012	3300010366	Tropical Forest Soil	MAVQRAAARSEAELSELVACTLNGTDLKGQRERWINVGTNFGRSREETDEGLRLLFDDHPAIETELEALVSVENECCSWASWAVEREDGVLVMAARSRGEGIATLHTMFREAMPSA*
Ga0126379_125662332	3300010366	Tropical Forest Soil	GARVASNQIDLNAEQELAELVACVLSHTDLKTQRERWINVGANFGISRETTGDGLRLTFKDHGAVEQELRALVAIENDCCSWASWSVDREDGVLVMAARSTGEGISTLHGMFKEAIAAGL
Ga0134125_113630962	3300010371	Terrestrial Soil	MASDELSAVVACTLVDTELKTQRERWIDLGLNFGLDREETGDGLRLTYRSHPAVERELQELVAVESQCCSWASWSVEHEGADVLALAARSQGEGIAALHGMFKEAMPADPAV*
Ga0105239_120397352	3300010375	Corn Rhizosphere	MTTRIGKALSAAELDELVACTLIEANLRTQRERWISLGENFGLARIPTDDGLRLTFTFHPQVEAELHALVAVENDCCAWASWTVERDKDGAL
Ga0134126_102473923	3300010396	Terrestrial Soil	MASDELSAVVACTLVDTELKTQRERWIDLGLNFGLDREETGDGLRLTYRSHPAVERELQELVAVESECCSWASWSVEHEGADVLALAARSQGEGIAALHGMFKEAMPADPAV*
Ga0126383_100934324	3300010398	Tropical Forest Soil	ELAELVACTLSDTDLKTQRERWINVGTNFGIGREKTDDGLQLTFKDHPAVEQELRALVAVENDCCSWASWSVERKEGALVMAAESNGEGVSTLHGMFKEAMPSV*
Ga0137391_101456022	3300011270	Vadose Zone Soil	MAIQHLDAAADRELSELVACTLNETNLKTQRERWINLGENFGIARHETADGLLLTFKDHPAVAAELEALVQVENDCCSWAAWTVERDEDRTLVMAARSQGEGIATLHGMFTKEATPWKRSSECC*
Ga0137389_101501952	3300012096	Vadose Zone Soil	MAIQHLDAAADRELSELVACTLNETTLKTQRERWINLGENFGIARHETADGLLLTFKDHPAVAAELEALVQVENDCCSWAAWTVERDEDGTLVMAARSQGEGIATLHGVFTKEATPWKRSSECC*
Ga0137388_103418732	3300012189	Vadose Zone Soil	MAIQHLDAAADRELSELVACTLNETNLKTQRERWINLGENFGIARHETADGLLLTFKDHPAVAAELEALVQVENACCSWAAWTVERDEDGTLVMAAHSQGEGIATLHGMFTKEATPWKSSSECC*
Ga0137382_101167812	3300012200	Vadose Zone Soil	MAVQKATPRSEAELSELVACTLNDTDLKTQRERWINVGTNFGRSREETNNGLRLLFDDHPAIETELGALVAVENECCSWASWAVEREDGVLVMAARSRGEGIATLHTMFHEAMPAVSSHDGP*
Ga0137382_111016292	3300012200	Vadose Zone Soil	SELVACTLIDTDLKTQRERWISLGENFGLGRYETPDGLRLTFRDHPAVEAELRTLVAIENQCCSWAAWSVERGDGALTMAARTQGDRIAALHGMFTSATPWRSLES*
Ga0137374_103495892	3300012204	Vadose Zone Soil	MMTTHRTGASAERELSELVACTLADTDLKTQRERWINLGEHFGLSRYETADGLRLSFKDHPAVEAELQALIEVENGCCSWAAWSVERSQDGALVMTASSQDDGIAALHAMFTSPWSRRENSSGPP*
Ga0137381_111134431	3300012207	Vadose Zone Soil	MMTTPSTRAAAEHELSELVACTLIDTDLKTQRERWIDLGENFGLGRYETDDGLRLTFRDHPAVEAELQALVEVENECCSWAVWSIERGKDGALVMSARSQDDGIAALHGMFTSATPWSRRQHR*
Ga0137379_105655572	3300012209	Vadose Zone Soil	MMTTPSTHGAGEHELSELVACTLIDTDLKTQRERWIDLGENFGLGRYETDDGLRLTFKDHAAVEAELQTLVAVENECCSWAAWSIERGEDGALVMAARSQDDGIAALHGMFTSATPWSRRQHR*
Ga0137371_103989452	3300012356	Vadose Zone Soil	MMTTPSTHGAGEHELSELVACTLIDTDLKPQRERWLNLGENFGLGRYETDDGLRLTFKDHAAVEAELQTLVAVENECCSWAAWSIERGEDGALVMAARSQDDGIAALHGMFTSATPMEPSPGPLEA*
Ga0137385_104135563	3300012359	Vadose Zone Soil	MMTTKSIDAAAEHELSELVACTLIDTDLKTQRERWIDLGENFGLGRYETDDGLRLTFRDHPAVEAELQTLVAVENECCSWAAWSIERGEDGALVMAARSQDDGIAALHGMFTSATPWSRRQDR*
Ga0126375_108029451	3300012948	Tropical Forest Soil	FLFALDIKPTLTSTLSSSRRPAAREERIMSTQSTDPAAESELSELVACTLIDTDLKTQRERWINLGENFGLGRFETDDGLRLTFKDHPAVEAELEALVAVENECCSWAHWSVERGGDGGLVMAARSRDDGIAALHGMFTSATPWSRRQDG*
Ga0126369_109161531	3300012971	Tropical Forest Soil	VAIDQTNPTAEHDLAELVACTLSDTDLKTQRERWINVDTNFGIGREKTDDGLRLAFKDHPAVEQELRALVAVENDCCSWASWSVERKEGALVMAARSKGEGISTLHGMFKEAMPAAAHGDSEGE*
Ga0126369_123151811	3300012971	Tropical Forest Soil	MAVQDATPRSEAELSKLVACTLNDTDHKTQRERWINLGTNFGRGRETTEDGLRLLFDSHPAVESELRALVAVERNCCSWAAWSVEHEDGVLVMAARSQGEGITTLHGMFRGFS*
Ga0134076_105608901	3300012976	Grasslands Soil	LIDTDLRTQRERWINLAGNFGLGRYETDDGLRLTFKDHAAVEAELQALVAGENECCSWAAWSIERGKDGALVMSARSQDDGIAALHGMFTSATPWSRRQHR*
Ga0164305_108201231	3300012989	Soil	MTTRIGKALSAAELDELVACTLIEANLRTQRERWISLGENFGLARIPTDDGLRLTFTFHPQVEAELHALVAVENDCCAWASWTVERDKDGALAMVARSHADGVATLHTMFTEAEPWRRDS
Ga0134072_102834471	3300015357	Grasslands Soil	AEEALPLSRATSPIGSDPGDASSLGSGLDIKSTLTSILPSSRCTTARKERMMTTPSTHAAAEHELSELVACTLIDTDLKTQRERWINLGENFGLGRYETDDGLRLTFKDHPAVEAELQELVAVENECCSWAAWNVERGEDGALVMAARAQGDGIAALHGMFTSATPWSRRQDR*
Ga0066667_110228322	3300018433	Grasslands Soil	MTTPSTEAAAEHGLSELVACTLIDTDLKTQRERWISLGENFGLGRHETDDGLRLTFKDHPAVEAELQALVEVENECCSWAAWSVERGEDGALVMAARSQDDGIAALHGMFTS
Ga0066667_111036252	3300018433	Grasslands Soil	MSGQSRHPEAERELSELVACTLSDTNLKTQRERWMSLGENFGIARYETADGLRLTFKDHPAVATELRALVEMENGCCSWATWRVERSEDGALVVAARSQGEGIAALHGMFTSATSWNSSR
Ga0066667_114932411	3300018433	Grasslands Soil	MAVQKATPRSEAELSELVACTLNDTDLKTQRERWINVGTNFGRSREETDDGLRLLFDDHPAIETELGALVAVENECCSWASWAVEREDGVLVMAARSRGEGIATLHTMFHEAMPAVSSHDGP
Ga0066669_118360222	3300018482	Grasslands Soil	VTTPSTHAAAEHELSELVACTLIDTDLKTQRERWISLGENFGLGRYETDDGLRLSFKDHPAVEAELQALVEVENECCSWAVWSIERGKDGALVMAARAQDDGIAALHGMFTSATPWSRRQDR
Ga0193726_10867654	3300020021	Soil	MTGHVGNNKVDRELDELVACTLIETDLKTQQQRWVNLGENFGTARVATDDGLRLTFRYHPQIERELCALVAVENDCCAWAAWSVERGQDGSAVMAARSHGEGVATLHTMFTDPCFNRS
Ga0126371_109541831	3300021560	Tropical Forest Soil	VATSETGPRAEQELAELVTCTRSDTELKTQRERWINVGTNFGLAREMTGDGLQLTFKDHPAVEQELRALVAVENECCSWASWSVDRMDGVVVMAARSKGEGISTLHGMFKDAMPAAAHGG
Ga0207699_105747681	3300025906	Corn, Switchgrass And Miscanthus Rhizosphere	MTTRIGKALSATELDELVACTLIEANLRTQRERWISLGENFGLARIPTDDGLRLTFTFHPQVEAELHALVAVENDCCAWASWTVERDKDGALAMVARSHADGVATLHTMFTEAEPWRSDS
Ga0207705_1000059015	3300025909	Corn Rhizosphere	MTARAEFRPSEPELSELVACTLTDSGLKTQQERWTTLCENFGISRIVTDDGLGLTFRHHPQVAAELLALVDVENACCGWASWAVERDADGSLVMAARSQADGVATLHSMFIQAGPWRDG
Ga0207671_103146001	3300025914	Corn Rhizosphere	MTTRIGKALSAAELNELVACTLIEANLKTQRERWISLGENFGLARIPTDDGLRLTFTFHPQVEAELHALVAVENDCCAWASWTVERDKDGALAMVARSHADGVATLHTMFTEAEPWRSDS
Ga0207663_105563021	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	EANLRTQRERWISLGENFGLARIPTDDGLRLTFTFHPQVEAELHALVAVENDCCAWASWTVERDKDGALAMVARSHADGVATLHTMFTEAEPWRSDS
Ga0207657_110384491	3300025919	Corn Rhizosphere	MTTRIGKALSAAELNELVACTLIEANLRTQRERWISLGENFGLARIPTDDGLRLTFTFHPQVEAELHALVAVENDCCAWASWTVERDKDGALAMVARSHADGVATLHTMFTEAEPWRSDS
Ga0207690_118767551	3300025932	Corn Rhizosphere	MTTRIGKALSAAELDELVACTLIEANLRTQRERWISLGENFGLARIPTDDGLRLTFTFHPQVEAELHALVAVENDCCAWASWTVERDKDGALAMVA
Ga0207679_116188912	3300025945	Corn Rhizosphere	AELDELVACTLIEANLRTQRERWISLGENFGLARIPTDDGLRLTFTFHPQVEAELHALVAVENDCCAWASWTVERDKDGALAMVARSHADGVATLHTMFTEAEPWRSDS
Ga0207667_116576262	3300025949	Corn Rhizosphere	VIRQLNELVACTLIEANLRTQRERWISLGENFGLARIPTDDGLRLTFTFHPQVEAELQALVAVENDCCAWASWTVERDKDGALAMVARSHADGVATLHTMFTEAEPWRSDS
Ga0207702_120411261	3300026078	Corn Rhizosphere	MTTRIGKALSAAELDELVACTLIEANLRTQRERWISLGENFGLARIPTDDGLRLTFTFHPQVEAELHALVAVENDCCAWASWTVERDKDGALAMVARSHADGVATLHTMFTEAEPWR
Ga0207676_102228581	3300026095	Switchgrass Rhizosphere	TTRIGKALSATELDELVACTLIEANLRTQRERWISLGENFGLARIPTDDGLRLTFTFHPQVEAELHALVAVENDCCAWASWTVERDKDGALAMVARSHADGVATLHTMFTEAEPWRSDS
Ga0209234_10683063	3300026295	Grasslands Soil	MTSQHELSELIACTLNDTNLKTQRERWINLGENFGLGRYETDDGLRLTFKDHPAVEAELQALVAVENECCSWAAWSVERSEDGALVAAARSQGEGVAALHGMFTSATPWNSSRS
Ga0209055_12268602	3300026309	Soil	MTTQSMDAAAEHELSELVACTLIDTDLKTQRERWINLGENFGLGRYETDDGLRLTFKDHPAVEAELQALVEVENECCSWAAWSIERGKDGALVMAARSQGEGIATLHGMFTKEATPWTSSSEC
Ga0209152_102712342	3300026325	Soil	AAEHELSELVACTLIDTDLKTQRERWINLGENFGLGRYETDDGLRLTFKDHPAVEAEMQALVAVENECCSWAAWSIERGKDGALVMAARSQDDGIAAFHGMFTSATPWSRRHDR
Ga0209807_10671733	3300026530	Soil	MTTQNLDELSELVACTLIDTDLKTQRERWISLGENFGLGRYETDDGLRLSFKDHPAVEAELQALVAGENECCSWAAWSIERDEDGALVMAARAQGDGIAALHGMFTSATPWSRRGGSLEA
Ga0209474_100733513	3300026550	Soil	MATQHLDAAADRELSELVACTLNETNLKTQRERWIILGESFGTGRFETADGLRLTFKDHPAVVAELQALVAVENECCSWAAWTVERGEDGAPAMAARSQGEGIATLHGMFTSEATPWKNS
Ga0209796_101673092	3300027766	Agave	MNARAGHPPSKAELDELVACTLTEPNLMTQQERWINLGENFGIARIPTDDGLRLTFWNHPEVAVELQALVDVENRCCGWASWTIERDEQGALVMAARSHADGVASLHTMFTQAGPWSSDS
Ga0209580_102911172	3300027842	Surface Soil	VAISETSPRAEHELAELVACTLSDTDLKTQRERWINVGTNFGLAREKTDDGLQLTFKDHPAIEQELRALVAVENDCCSWASWSVDRKEGVLVMAARSKGEGISTLHGMFGEAMPAATHVD
Ga0209068_102148962	3300027894	Watersheds	MTAQSIDRTAERELSELIACTLNNTNLMTQRERWINLGRNFSIAWHEAADGLRVTFKDHPAVAAELNALVAVENECCSWASWSVERDREGALVMAARSQGEGIATLHRLFTSATMEARRP
Ga0209168_101775282	3300027986	Surface Soil	MATQHLNAAADRELSELVACTLNETNLKTQRERWINLGENFGIARHETADGLHLTFINHPAVAAELEALVQVENDCCAWAAWTVERGDDGTLVMAARSTGDGIATLHGMFTTEATPWRGTCESC
Ga0307282_103728082	3300028784	Soil	VELSDLVACTLTTGDLKTQRERWLRLGETFGLGRTETEDGLCVSFRYHPAVEEELRALVAVENECCSWAAWSVERSEDGALVMAARSQDDGIAALHGMFTSATLWSRREDR
Ga0307277_100275344	3300028881	Soil	MSTQSMQAAAERELSELVACTPTDTDLKTQRERWISLGENFGLGRYETADGLRLTFKDHPAVEAELQALVEVENECCSWAAWSVERSEDGALVMAARSQDDGIAALHGMFTSATLWSRREDR
Ga0307498_100476712	3300031170	Soil	MTTKTTAAHELSELVACTLNDTDLKSQRDRWLNLGEHFGIARKQTEDGLRITFKDHPAVAVELQALVAVENECCSWADWSVEREDGALVMAARSEGEGVVALHGMFTTAIPVG
Ga0307495_102342202	3300031199	Soil	MTAKTTTAHELSELVACTLNDTDLKSQRDRWLNLGEHFGIARKQTEDGLRITFKDHPAVAVELQALVAVENECCSWADWSVEREDGALVMAARSEGEGVVALHGMFTTAIPVG
Ga0308175_1004619712	3300031938	Soil	MRTEAELSELVACTLNGTDLKSQRERWINVGTNFGRSREEADDGLRLVYDDHPAVEAELRALVAVENECCSWALWSVEREDSSLVMAARSRGEGIGTLHTMFREAMPTADE
Ga0308176_101351434	3300031996	Soil	MRTEAELSELVACTLNGTDLKSQRERWINVGTTFGRSREEADDGLRLVYDDHPAVEAELHALVAVENECCSWALWSVERENGSLVMAARSRGEGIGTLHTMFHEAMPAADR
Ga0310810_110603822	3300033412	Soil	DELVACTLIEANLRTQRERWISLGENFGLARIPTDDGLRLTFTFHPQVEAELHALVAVENDCCAWASWTVERDKDGALAMVARSHADGVATLHTMFTEAEPWRSDS

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F064216

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Structural matches with SCOPe domains

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences