Metagenome / Metatranscriptome Family F064159

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F064159
Family Type	Metagenome / Metatranscriptome
Number of Sequences	129
Average Sequence Length	45 residues
Representative Sequence	MHRLSTVLCTSGLAAEARIARAAGFPVVIGAGDRERTAALVE
Number of Associated Samples	117
Number of Associated Scaffolds	129

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	96.06 %
% of genes near scaffold ends (potentially truncated)	97.67 %
% of genes from short scaffolds (< 2000 bps)	88.37 %
Associated GOLD sequencing projects	116
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.51

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (57.364 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (29.457 % of family members)
Environment Ontology (ENVO)	Unclassified (31.008 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (40.310 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 24.29% β-sheet: 8.57% Coil/Unstructured: 67.14%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.51
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.51
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 129 Family Scaffolds
PF13243	SQHop_cyclase_C	46.51
PF00067	p450	11.63
PF13249	SQHop_cyclase_N	8.53
PF01593	Amino_oxidase	3.88
PF06574	FAD_syn	3.88
PF00494	SQS_PSY	1.55
PF01048	PNP_UDP_1	0.78
PF03918	CcmH	0.78

COG ID	Name	Functional Category	% Frequency in 129 Family Scaffolds
COG2124	Cytochrome P450	Defense mechanisms [V]	11.63
COG0196	FAD synthase	Coenzyme transport and metabolism [H]	3.88
COG1562	Phytoene/squalene synthetase	Lipid transport and metabolism [I]	1.55
COG0775	Nucleoside phosphorylase/nucleosidase, includes 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase MtnN and futalosine hydrolase MqnB	Nucleotide transport and metabolism [F]	0.78
COG0813	Purine-nucleoside phosphorylase	Nucleotide transport and metabolism [F]	0.78
COG2820	Uridine phosphorylase	Nucleotide transport and metabolism [F]	0.78
COG3088	Cytochrome c-type biogenesis protein CcmH/NrfF	Posttranslational modification, protein turnover, chaperones [O]	0.78

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	57.36 %
Unclassified	root	N/A	42.64 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	57.36 %
Unclassified	root	N/A	42.64 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	57.36 %
Unclassified	root	N/A	42.64 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	48.84 %
Unclassified	root	N/A	42.64 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	42.64 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	37.98 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	42.64 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	11.63 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	5.43 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2.33 %
Thermoleophilia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	42.64 %
unclassified Rhodospirillales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales	6.98 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	5.43 %
Acetobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	3.10 %
Beijerinckiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae	0.78 %
Thermoleophilales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	42.64 %
Rhodospirillales bacterium URHD0088	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	5.43 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	5.43 %
Rhodospirillales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium	1.55 %
unclassified Acetobacteraceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → unclassified Acetobacteraceae	0.78 %
unclassified Beijerinckiaceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → unclassified Beijerinckiaceae	0.78 %
Thermoleophilaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	42.64 %
Rhodospirillales bacterium URHD0088	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	5.43 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	5.43 %
Rhodospirillales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium	1.55 %
unclassified Thermoleophilaceae	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae → unclassified Thermoleophilaceae	0.78 %
Beijerinckiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → unclassified Beijerinckiaceae → Beijerinckiaceae bacterium	0.78 %
Acetobacteraceae bacterium AT-5844	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → unclassified Acetobacteraceae → Acetobacteraceae bacterium AT-5844	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	42.64 %
Rhodospirillales bacterium URHD0088	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	5.43 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	5.43 %
Rhodospirillales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium	1.55 %
Thermoleophilaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae → unclassified Thermoleophilaceae → Thermoleophilaceae bacterium	0.78 %
Beijerinckiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → unclassified Beijerinckiaceae → Beijerinckiaceae bacterium	0.78 %
Acetobacteraceae bacterium AT-5844	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → unclassified Acetobacteraceae → Acetobacteraceae bacterium AT-5844	0.78 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300004080\|Ga0062385_11028252	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	555	Open in IMG/M
3300004152\|Ga0062386_100060245	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium	2870	Open in IMG/M
3300005166\|Ga0066674_10349679	All Organisms → cellular organisms → Bacteria → Proteobacteria	694	Open in IMG/M
3300005171\|Ga0066677_10377223	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	812	Open in IMG/M
3300005290\|Ga0065712_10566776	All Organisms → cellular organisms → Bacteria → Proteobacteria	608	Open in IMG/M
3300005332\|Ga0066388_107671437	Not Available	541	Open in IMG/M
3300005446\|Ga0066686_10544866	Not Available	788	Open in IMG/M
3300005458\|Ga0070681_11861772	All Organisms → cellular organisms → Bacteria → Proteobacteria	529	Open in IMG/M
3300005529\|Ga0070741_11051340	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	695	Open in IMG/M
3300005535\|Ga0070684_100639747	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	990	Open in IMG/M
3300005539\|Ga0068853_102301376	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	522	Open in IMG/M
3300005549\|Ga0070704_102057771	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	530	Open in IMG/M
3300005559\|Ga0066700_10095378	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1939	Open in IMG/M
3300005561\|Ga0066699_10286817	All Organisms → cellular organisms → Bacteria	1170	Open in IMG/M
3300005563\|Ga0068855_101535745	All Organisms → cellular organisms → Bacteria → Proteobacteria	683	Open in IMG/M
3300005574\|Ga0066694_10484796	All Organisms → cellular organisms → Bacteria → Proteobacteria	577	Open in IMG/M
3300005576\|Ga0066708_10742730	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	619	Open in IMG/M
3300005844\|Ga0068862_101096382	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	791	Open in IMG/M
3300006046\|Ga0066652_101837458	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	546	Open in IMG/M
3300006163\|Ga0070715_10259531	Not Available	912	Open in IMG/M
3300006800\|Ga0066660_11659617	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → unclassified Acetobacteraceae → Acetobacteraceae bacterium AT-5844	508	Open in IMG/M
3300006806\|Ga0079220_11985001	Not Available	518	Open in IMG/M
3300009038\|Ga0099829_10697829	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	843	Open in IMG/M
3300009137\|Ga0066709_104669536	Not Available	501	Open in IMG/M
3300009156\|Ga0111538_13479473	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	546	Open in IMG/M
3300009162\|Ga0075423_13196453	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	502	Open in IMG/M
3300009545\|Ga0105237_12724427	Not Available	505	Open in IMG/M
3300010361\|Ga0126378_10058426	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium	3635	Open in IMG/M
3300010366\|Ga0126379_10678019	Not Available	1123	Open in IMG/M
3300010375\|Ga0105239_12240625	Not Available	635	Open in IMG/M
3300010376\|Ga0126381_100574860	Not Available	1600	Open in IMG/M
3300010376\|Ga0126381_101984051	Not Available	839	Open in IMG/M
3300010376\|Ga0126381_102453538	Not Available	748	Open in IMG/M
3300010398\|Ga0126383_13432331	Not Available	517	Open in IMG/M
3300011120\|Ga0150983_13567148	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	505	Open in IMG/M
3300011444\|Ga0137463_1049611	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → unclassified Beijerinckiaceae → Beijerinckiaceae bacterium	1562	Open in IMG/M
3300012205\|Ga0137362_11410983	All Organisms → cellular organisms → Bacteria → Proteobacteria	582	Open in IMG/M
3300012209\|Ga0137379_10333937	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1426	Open in IMG/M
3300012211\|Ga0137377_10871963	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	832	Open in IMG/M
3300012353\|Ga0137367_11058052	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	550	Open in IMG/M
3300012355\|Ga0137369_10782235	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	652	Open in IMG/M
3300012387\|Ga0134030_1285620	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	527	Open in IMG/M
3300012582\|Ga0137358_10407947	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	919	Open in IMG/M
3300012582\|Ga0137358_10925853	All Organisms → cellular organisms → Bacteria → Proteobacteria	570	Open in IMG/M
3300012683\|Ga0137398_11153728	Not Available	531	Open in IMG/M
3300012917\|Ga0137395_10526816	Not Available	852	Open in IMG/M
3300012925\|Ga0137419_10702150	Not Available	821	Open in IMG/M
3300012927\|Ga0137416_10852590	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae → unclassified Thermoleophilaceae → Thermoleophilaceae bacterium	808	Open in IMG/M
3300012929\|Ga0137404_11000682	Not Available	765	Open in IMG/M
3300012971\|Ga0126369_10175860	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2040	Open in IMG/M
3300013308\|Ga0157375_13112160	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	553	Open in IMG/M
3300014262\|Ga0075301_1100285	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	626	Open in IMG/M
3300015373\|Ga0132257_102181563	All Organisms → cellular organisms → Bacteria → Proteobacteria	716	Open in IMG/M
3300016294\|Ga0182041_12173520	Not Available	518	Open in IMG/M
3300016319\|Ga0182033_12123787	Not Available	512	Open in IMG/M
3300016357\|Ga0182032_11423847	Not Available	600	Open in IMG/M
3300016371\|Ga0182034_10195345	Not Available	1560	Open in IMG/M
3300016404\|Ga0182037_11632016	Not Available	574	Open in IMG/M
3300016422\|Ga0182039_10387924	All Organisms → cellular organisms → Bacteria	1182	Open in IMG/M
3300016422\|Ga0182039_12166681	Not Available	513	Open in IMG/M
3300018422\|Ga0190265_13636082	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	514	Open in IMG/M
3300018431\|Ga0066655_10246544	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1137	Open in IMG/M
3300018433\|Ga0066667_11059879	All Organisms → cellular organisms → Bacteria → Proteobacteria	700	Open in IMG/M
3300018433\|Ga0066667_12186462	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	515	Open in IMG/M
3300018482\|Ga0066669_12166565	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	526	Open in IMG/M
3300020580\|Ga0210403_11526388	Not Available	502	Open in IMG/M
3300020582\|Ga0210395_10613200	Not Available	816	Open in IMG/M
3300021168\|Ga0210406_10319501	All Organisms → cellular organisms → Bacteria → Proteobacteria	1259	Open in IMG/M
3300021178\|Ga0210408_11172905	All Organisms → cellular organisms → Bacteria → Proteobacteria	588	Open in IMG/M
3300021420\|Ga0210394_10570906	All Organisms → cellular organisms → Bacteria	994	Open in IMG/M
3300021559\|Ga0210409_11081965	Not Available	677	Open in IMG/M
3300021560\|Ga0126371_10023043	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	5763	Open in IMG/M
3300021560\|Ga0126371_13110182	All Organisms → cellular organisms → Bacteria → Proteobacteria	561	Open in IMG/M
3300022711\|Ga0242674_1013434	Not Available	886	Open in IMG/M
3300022722\|Ga0242657_1072332	Not Available	802	Open in IMG/M
3300025324\|Ga0209640_10449751	All Organisms → cellular organisms → Bacteria	1057	Open in IMG/M
3300025920\|Ga0207649_11230510	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	592	Open in IMG/M
3300025922\|Ga0207646_10653783	Not Available	942	Open in IMG/M
3300025926\|Ga0207659_10938981	Not Available	744	Open in IMG/M
3300025930\|Ga0207701_10804429	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	791	Open in IMG/M
3300025938\|Ga0207704_11262023	Not Available	631	Open in IMG/M
3300025944\|Ga0207661_10991890	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	774	Open in IMG/M
3300026035\|Ga0207703_10723701	Not Available	947	Open in IMG/M
3300026550\|Ga0209474_10357682	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	810	Open in IMG/M
3300026557\|Ga0179587_10489729	Not Available	806	Open in IMG/M
3300027737\|Ga0209038_10006273	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	3509	Open in IMG/M
3300028381\|Ga0268264_10306568	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1497	Open in IMG/M
3300030905\|Ga0308200_1116976	Not Available	585	Open in IMG/M
3300031122\|Ga0170822_12393914	Not Available	612	Open in IMG/M
3300031543\|Ga0318516_10060412	Not Available	2084	Open in IMG/M
3300031544\|Ga0318534_10644861	Not Available	600	Open in IMG/M
3300031545\|Ga0318541_10186716	Not Available	1145	Open in IMG/M
3300031561\|Ga0318528_10101994	Not Available	1507	Open in IMG/M
3300031564\|Ga0318573_10165545	All Organisms → cellular organisms → Bacteria	1164	Open in IMG/M
3300031564\|Ga0318573_10361399	Not Available	779	Open in IMG/M
3300031640\|Ga0318555_10638392	Not Available	576	Open in IMG/M
3300031679\|Ga0318561_10007015	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	4714	Open in IMG/M
3300031679\|Ga0318561_10206845	Not Available	1065	Open in IMG/M
3300031680\|Ga0318574_10397838	Not Available	805	Open in IMG/M
3300031680\|Ga0318574_10482732	Not Available	726	Open in IMG/M
3300031681\|Ga0318572_10021831	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	3224	Open in IMG/M
3300031681\|Ga0318572_10642679	Not Available	632	Open in IMG/M
3300031708\|Ga0310686_104974276	All Organisms → cellular organisms → Bacteria → Proteobacteria	540	Open in IMG/M
3300031719\|Ga0306917_10009220	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	5591	Open in IMG/M
3300031719\|Ga0306917_10068421	All Organisms → cellular organisms → Bacteria	2453	Open in IMG/M
3300031747\|Ga0318502_10515410	Not Available	717	Open in IMG/M
3300031763\|Ga0318537_10035451	All Organisms → cellular organisms → Bacteria	1786	Open in IMG/M
3300031764\|Ga0318535_10358049	Not Available	652	Open in IMG/M
3300031769\|Ga0318526_10107543	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1118	Open in IMG/M
3300031770\|Ga0318521_10285998	All Organisms → cellular organisms → Bacteria	968	Open in IMG/M
3300031771\|Ga0318546_10000622	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	13700	Open in IMG/M
3300031777\|Ga0318543_10208407	Not Available	868	Open in IMG/M
3300031795\|Ga0318557_10136923	All Organisms → cellular organisms → Bacteria	1102	Open in IMG/M
3300031796\|Ga0318576_10020980	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	2595	Open in IMG/M
3300031797\|Ga0318550_10544010	Not Available	559	Open in IMG/M
3300031846\|Ga0318512_10164694	Not Available	1075	Open in IMG/M
3300031893\|Ga0318536_10300863	All Organisms → cellular organisms → Bacteria → Proteobacteria	814	Open in IMG/M
3300031912\|Ga0306921_11162360	Not Available	861	Open in IMG/M
3300031938\|Ga0308175_101587388	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	732	Open in IMG/M
3300031946\|Ga0310910_10976167	Not Available	663	Open in IMG/M
3300031947\|Ga0310909_10620833	Not Available	902	Open in IMG/M
3300031962\|Ga0307479_11789081	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	566	Open in IMG/M
3300032090\|Ga0318518_10012755	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	3525	Open in IMG/M
3300032091\|Ga0318577_10604439	Not Available	521	Open in IMG/M
3300032180\|Ga0307471_103564488	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	551	Open in IMG/M
3300032515\|Ga0348332_13754807	All Organisms → cellular organisms → Bacteria	880	Open in IMG/M
3300033158\|Ga0335077_11017959	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	825	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	88.37%
Host-Associated	Host-Associated	11.63%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	85.27%
Plants	Host-Associated → Plants	11.63%
Aquatic	Environmental → Aquatic	3.10%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	84.50%
Rhizoplane	Host-Associated → Plants → Rhizoplane	6.20%
Rhizosphere	Host-Associated → Plants → Rhizosphere	5.43%
Freshwater	Environmental → Aquatic → Freshwater	2.33%
Sediment	Environmental → Aquatic → Sediment	0.78%
Plant Litter	Environmental → Terrestrial → Plant Litter	0.78%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	75.19%
Loam	Environmental → Terrestrial → Soil → Loam	7.75%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	4.65%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	3.88%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	2.33%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	1.55%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.55%
Soil	Host-Associated → Plants → Rhizosphere → Soil	1.55%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.78%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified	0.78%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	39.53%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	22.48%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	11.63%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	4.65%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	4.65%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	3.88%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	2.33%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	1.55%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	1.55%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.55%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	1.55%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.78%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.78%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	0.78%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.78%
Unclassified	Environmental → Terrestrial → Soil → Loam → Unclassified	0.78%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified	0.78%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	29.46%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	11.63%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	7.75%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	6.98%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	6.98%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	3.88%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	2.33%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.33%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.33%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	2.33%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	2.33%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.55%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	1.55%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	1.55%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.55%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	0.78%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.78%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.78%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.78%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Corn, Switchgrass And Miscanthus Rhizosphere	0.78%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.78%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	0.78%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.78%
Natural And Restored Wetlands	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands	0.78%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.78%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.78%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.78%
Soil	Environmental → Terrestrial → Soil → Loam → Unclassified → Soil	0.78%
Plant Litter	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter	0.78%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.78%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere	0.78%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.78%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.78%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.78%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.78%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300004080	Coassembly of ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300004152	Coassembly of ECP12_OM1, ECP12_OM2, ECP12_OM3	Environmental	Open in IMG/M
3300005166	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_123	Environmental	Open in IMG/M
3300005171	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126	Environmental	Open in IMG/M
3300005290	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1	Host-Associated	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005446	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135	Environmental	Open in IMG/M
3300005458	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG	Environmental	Open in IMG/M
3300005529	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen16_06102014_R1	Environmental	Open in IMG/M
3300005535	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG	Environmental	Open in IMG/M
3300005539	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2	Host-Associated	Open in IMG/M
3300005549	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG	Environmental	Open in IMG/M
3300005559	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149	Environmental	Open in IMG/M
3300005561	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148	Environmental	Open in IMG/M
3300005563	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2	Host-Associated	Open in IMG/M
3300005574	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_143	Environmental	Open in IMG/M
3300005576	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157	Environmental	Open in IMG/M
3300005844	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2	Host-Associated	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006163	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG	Environmental	Open in IMG/M
3300006800	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109	Environmental	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300007258	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009545	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG	Host-Associated	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300011444	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT800_2	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012353	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_80_16 metaG	Environmental	Open in IMG/M
3300012355	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_113_16 metaG	Environmental	Open in IMG/M
3300012387	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_20cm_2_16_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300012683	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaG	Environmental	Open in IMG/M
3300012917	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300014262	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_TuleA_D1	Environmental	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300018422	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 124 T	Environmental	Open in IMG/M
3300018431	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020582	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300022711	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022722	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-12-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300025324	Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 10_1 (SPAdes)	Environmental	Open in IMG/M
3300025920	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025926	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025930	Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)	Environmental	Open in IMG/M
3300025938	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025944	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300026035	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026550	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145 (SPAdes)	Environmental	Open in IMG/M
3300026557	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal	Environmental	Open in IMG/M
3300027737	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP03_OM3 (SPAdes)	Environmental	Open in IMG/M
3300028381	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300030905	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_204 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031122	Oak Spring Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031544	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f26	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031561	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f26	Environmental	Open in IMG/M
3300031564	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f21	Environmental	Open in IMG/M
3300031640	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f23	Environmental	Open in IMG/M
3300031679	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f23	Environmental	Open in IMG/M
3300031680	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f22	Environmental	Open in IMG/M
3300031681	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f20	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031747	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f22	Environmental	Open in IMG/M
3300031763	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f29	Environmental	Open in IMG/M
3300031764	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f27	Environmental	Open in IMG/M
3300031769	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f24	Environmental	Open in IMG/M
3300031770	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031777	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f24	Environmental	Open in IMG/M
3300031795	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f19	Environmental	Open in IMG/M
3300031796	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f24	Environmental	Open in IMG/M
3300031797	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f23	Environmental	Open in IMG/M
3300031846	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f19	Environmental	Open in IMG/M
3300031893	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f28	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031938	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R1	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032090	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f22	Environmental	Open in IMG/M
3300032091	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f25	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032515	FICUS49499 Metatranscriptome Czech Republic combined assembly (additional data)	Environmental	Open in IMG/M
3300033158	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.1	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0062385_110282521	3300004080	Bog Forest Soil	MRRLSTVLCTSGLAAEAKIARAAGFPVVIGAGDRERTAALVENAVQ
Ga0062386_1000602451	3300004152	Bog Forest Soil	MHRLSSVLCTSGLAAEAKIARAAGFPVVIGAGDRERTAALVENAVQQ
Ga0066674_103496791	3300005166	Soil	MRILTPVLCTSGLAAEARVARAAGFQVIVGAGDPERTTALVKDAA
Ga0066677_103772232	3300005171	Soil	MRTLTPVLCTSGLAAEARVARAAGFQVIVGAGDPERTTAL
Ga0065712_105667761	3300005290	Miscanthus Rhizosphere	MRILTPVLCTSGLAAEARVARAAGFQVIVGAGDPERTTALVKD
Ga0066388_1076714371	3300005332	Tropical Forest Soil	MHRLSTVLCTSGLAAEARIARASGFPVVIGAGDRDRTAALVANAVKGANCLIS
Ga0066686_105448661	3300005446	Soil	MQPLAMVLCTSGLAVEAKIARAAGFSAVIGAGDRDRTAALV
Ga0070681_118617722	3300005458	Corn Rhizosphere	MRRTLTPVLCTSGLAAEARVARAAGFQVIVGAGDSRRTTALVAYAAQRAKCLISFG
Ga0070741_110513402	3300005529	Surface Soil	MRTLIPVLCTSGLAAEARIARAAGFQVIIGAGDPNRTATLVAAAAQQAKCLVSFGV
Ga0070684_1006397471	3300005535	Corn Rhizosphere	MRTLTPVLCTSGLAAEAKVARAAGFQVIVGAGDPRRTAELVELAAKRAKFLISFGVAG
Ga0068853_1023013761	3300005539	Corn Rhizosphere	MRTLTPVLCTSGLAAEAKVARAAGFQVIVGAGDPRRTAELVELAAKRAKFL
Ga0070704_1020577711	3300005549	Corn, Switchgrass And Miscanthus Rhizosphere	MRTLTPVLCTSGLAAEARVARAAGFQVIVGAGDPERTTALVKDAARDAKCLVSFGV
Ga0066700_100953781	3300005559	Soil	MRILTPVLCTSGLAAEARVARAAGFQVIVGGGDPGRTEALVEDAAQQAKCLVSFGVAG
Ga0066699_102868171	3300005561	Soil	MQPPATVLCTSGLAVEAKIARAAGFSVVIGAADRD
Ga0068855_1015357452	3300005563	Corn Rhizosphere	MRTLTPVLCTSGLAAEARIARAAGFQVIVGAGDPRRTAALVEAAAPQARCLISFGIA
Ga0066694_104847961	3300005574	Soil	MRTLIPVLCTSGLAAEAKVARAAGFQVIVGAGDPERTTALVQAAIRQAKCLI
Ga0066708_107427302	3300005576	Soil	MRTLTPVLCTSGLAAEARVARAAGFPVIVGAGDHGRTMVLLKNAAREAKCLVSFGVAG
Ga0068862_1010963821	3300005844	Switchgrass Rhizosphere	MRTLTPVLCTSGLAAEAKVARAAGFQVIVGAGDPRRTAELVELAA
Ga0066652_1018374581	3300006046	Soil	MRTLIPVLCTSGLAAEAKVARAAGFQVIVGAGDPERTTALVEAAIRRAKCLISFGIAGG
Ga0070715_102595312	3300006163	Corn, Switchgrass And Miscanthus Rhizosphere	MHRLSTVLCTSGLAAEAKIARAAGFPVIIGAGDRERTAVLVRNAVQRASC
Ga0066660_116596171	3300006800	Soil	MRTLAPVLCTSGLAAEARVARAAGFQVIVGGGDPRRTASLVQSAARQAKCLV
Ga0079220_119850011	3300006806	Agricultural Soil	MLRSSTVLCTSGLAVEAKIARAAGFPVVIGAGDRARTSALVEEA
Ga0099793_104236731	3300007258	Vadose Zone Soil	MQPPAMVLCTSGLAVEAKIARAAGFSVVIRAGDRDRTAALVATAAAQTD
Ga0099829_106978291	3300009038	Vadose Zone Soil	MRTLIPVLCTSGLAAEAKVARAAGFQVIVGAGDPERTTALVEAAIRQAKCLISFGIAGGL
Ga0066709_1046695361	3300009137	Grasslands Soil	MQPLATVLCTSGLAVEARIARAAGFSVVVGAGDRDRTAALVATAAAQTDC
Ga0111538_134794731	3300009156	Populus Rhizosphere	MSQRKGELRMRTLTPVLCTSGLAAEARIARAAGFPVIVGAGDPHRTAALVEAAA
Ga0075423_131964532	3300009162	Populus Rhizosphere	MRTLTPVLCTSGLAAEARIARAAGFPVIVGAGDPHRTAALVEAAARQAKCLV
Ga0105237_127244272	3300009545	Corn Rhizosphere	MHRLSTVLCTSGLAAEARIARAAGFPVVIGAGDRERTAALVE
Ga0126378_100584261	3300010361	Tropical Forest Soil	VGLLTSVLCTSGLAAEARIARAAGFPVVIGAGDRERTAAL
Ga0126379_106780192	3300010366	Tropical Forest Soil	MLCTSGLAIEAKIARAAGFSVAVGGGDRDRTRALVEAAA
Ga0105239_122406252	3300010375	Corn Rhizosphere	MSTLSTVLCTAGLAAEAKIARAAGFPVIVGGGDPYRTVSLVDTAAA
Ga0126381_1005748602	3300010376	Tropical Forest Soil	VLCTSGLAAEARIARAAGFPVVIGAGDRDRTAALVESA
Ga0126381_1019840511	3300010376	Tropical Forest Soil	MQPLATVLCTSGLMVEAKIAQAAGFSVVIGAGDRDRT
Ga0126381_1024535381	3300010376	Tropical Forest Soil	MSPLRRTLLCTTGLAAEARIARAAGFTTVVGGGDRERTA
Ga0126383_134323311	3300010398	Tropical Forest Soil	MHRLATVLCTSGLAAEARIARAAGFPVVIGAGDRDRTAALVESAVQHAKCLM
Ga0150983_135671481	3300011120	Forest Soil	MHRLSTVLCTSGLAAEAKVARAAGFSVVIGAGDRDRTAALVENAVRHA
Ga0137463_10496111	3300011444	Soil	MRTLTPVLCTSGLAAEARIARAAGFQVIVGAGDHRRTTVLVEAA
Ga0137362_114109832	3300012205	Vadose Zone Soil	MRTLIPVLCTSGLAAEAKVARAAGFQVIVGAGDPERTTALVEAAIRQAKC
Ga0137379_103339371	3300012209	Vadose Zone Soil	MRTLIPVLCTSGLAAEAKVARAAGFQVIVGSFDEAATT
Ga0137377_108719631	3300012211	Vadose Zone Soil	MRTLIPVLCTSGLAAEAKVARAAGFQVIVGAGDPERTTALVQAAIRQAKCL
Ga0137367_110580521	3300012353	Vadose Zone Soil	MRTLTPVLCTSGLAAEARVARAAGFPVIVGAGDHG
Ga0137369_107822352	3300012355	Vadose Zone Soil	MRTLTPVLCTSGLAAEARVARAAGFPVIVGAGDHGRTTVLLENAAR
Ga0134030_12856202	3300012387	Grasslands Soil	MRILTPVLCTSGLAAEARVARAAGFQVIVGAGDPERTTALVKDAARDAKCLVSFGVA
Ga0137358_104079471	3300012582	Vadose Zone Soil	MRTLTPVLCTSGLAAEARVARAAGFQVIVGAGDPERTTALVK
Ga0137358_109258531	3300012582	Vadose Zone Soil	MRTLTPVLCTSGLAAEAKVARAAGFQVIVGAGDPARTTAL
Ga0137398_111537282	3300012683	Vadose Zone Soil	MHRLSTVLCTSGLAAEAKIARAAGFPVVIGAGDRERTAALVESA
Ga0137395_105268162	3300012917	Vadose Zone Soil	MHRSSTVLCTSGLAAEARIARAAGFSVVIGAGDRERTAALVKD
Ga0137419_107021501	3300012925	Vadose Zone Soil	MQPPAMVLCTSGLAVEAKIARAAGFSVVIRAGDRDRT
Ga0137416_108525902	3300012927	Vadose Zone Soil	MQALPIVLCVTGLAAEAKIARAVGFQAVIGAGDPERTMALVAVAA
Ga0137404_110006822	3300012929	Vadose Zone Soil	MQPLATVLCTSGLAVEAKIARAAGFSVVIGAGDRDRT
Ga0126369_101758601	3300012971	Tropical Forest Soil	MVGAHSQPLVTVLCTSGLAVEAKIARAAGFSVVVGAGDRERTKAL
Ga0157375_131121601	3300013308	Miscanthus Rhizosphere	MRTLTPVLCTSGLAAEARIARAAGFQVIVGAGDPHRTAAMVEAAAQDAKC
Ga0075301_11002851	3300014262	Natural And Restored Wetlands	MHGLTPVLCACGLAAEARIARHAGFQVIVGAGDPHRTAALVASASRQAKCLISFGI
Ga0132257_1021815631	3300015373	Arabidopsis Rhizosphere	MRTLTPVLCTSGLAAEAKVARAAGFQVIVGAGDPRRTAELVELTARRAKFLVSFGFAGGLAPHLRS
Ga0182041_121735201	3300016294	Soil	KKFQGACMPSPVAVLCTSGLAVEAKIARAAGFSVVI
Ga0182033_121237871	3300016319	Soil	VRMHRLSTVLCTSGLAAEAKIARAAGFPVVIGAGDRERTAA
Ga0182032_114238471	3300016357	Soil	MQPLATVLCTSGLKVEAKIAQAAGFSVVIGAGDRDRTAAL
Ga0182034_101953452	3300016371	Soil	MHRLATVLCASGLAAEARIARAAGFPVVIGAGDRDRTA
Ga0182037_116320161	3300016404	Soil	MQPLATVLCTSGLRVEAKIAQAAGFAVVIGAGDRD
Ga0182039_103879242	3300016422	Soil	MHRLSTVLCTSGLAAEARIATAAGFPVIIGGGNRERTTALVEEAVRRASCL
Ga0182039_121666812	3300016422	Soil	MHRLSTVLCTSGLAAEAKIARAAGFPVVIGAGDRERTAALVQNAAQH
Ga0190265_136360821	3300018422	Soil	MRTLTPVLCTSGLAAEARVARAAGFQVIVGAGDPRRTAALVEVAARQAKCLVSFGVAG
Ga0066655_102465442	3300018431	Grasslands Soil	MRTLTPVLCTSGLAAEARVARAAGFQVIVGAGDPERTTALVKDAARDAGSGGTL
Ga0066667_110598791	3300018433	Grasslands Soil	MRTLTPVLCTSGLAAEARVARAAGFQVIVGAGDPERTTALVKDAARDAK
Ga0066667_121864621	3300018433	Grasslands Soil	MHRLATVLCTSGLAAEAKIARAAGFPVVIGAGDRERTAAL
Ga0066669_121665651	3300018482	Grasslands Soil	MRTLIPVLCTSGLAAEAKVARAAGFQVIVGAGDPERTTALVKAAIRQAKCLISFGIAGGL
Ga0210403_115263881	3300020580	Soil	MQPLSTVLCTSGLKVEAKIAQAAGFSVVIGAGDRTRTATLVGNAA
Ga0210395_106132001	3300020582	Soil	MPTFPTTVLCTSGLAAEARIARAAGFSTVVGGGDRNRTAA
Ga0210406_103195011	3300021168	Soil	MQPVTTVLCMSGLKVEAKIAQAAGFSVVVGAGDRDRTAAL
Ga0210408_111729051	3300021178	Soil	MRTLTPVLCTSGLAAEARVARAAGFQVIVGAGDPERTTALVKDAAREGK
Ga0210394_105709062	3300021420	Soil	MHRLSTVLCTSGLAAEAKIARAAGFPVVIGAGDRERT
Ga0210409_110819651	3300021559	Soil	MHRLSTVLCTSGLAAEAKIARAAGFPVVIGAGDRERTAALVESAVQGANCLM
Ga0126371_100230431	3300021560	Tropical Forest Soil	MQSPVTVLCTSGLAVEAKIARAAGFSVVIGAGDRYRTMT
Ga0126371_131101822	3300021560	Tropical Forest Soil	MQPLATVLCTSGLAIEAKIARAAGFSVVIGAGDRDRTAALVATAAART
Ga0242674_10134341	3300022711	Soil	MPTFPTTVLCTSGLAAEARIARAAGFSTVVGGGDRNRTAALVESAVGETKC
Ga0242657_10723321	3300022722	Soil	MHRLSTVLCTSGLAAEAKVARAAGFPVVIGAGDRERTAALVENAVRHA
Ga0209640_104497512	3300025324	Soil	MRALTPVLCTSGLAAEARIARAAGFQVIVGAGDHRRTAALVE
Ga0207649_112305102	3300025920	Corn Rhizosphere	MRTLTPVLCTSGLAAEARIARAAGFPVIVGAGDPHRTAALVEAAARQAKCLVSF
Ga0207646_106537832	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	MHRLSTVLCTSGLAAEARIARAAGFPVLIGAGDRE
Ga0207659_109389812	3300025926	Miscanthus Rhizosphere	MRTLTPVLCTSGLAAEARIARAAGFPVIVGAGDPHRTAALV
Ga0207701_108044292	3300025930	Corn, Switchgrass And Miscanthus Rhizosphere	MRTLTPVLCTSGLAAEAKVARAAGFQVIVGAGDPRRTAELVELAARR
Ga0207704_112620232	3300025938	Miscanthus Rhizosphere	MRTLTPVLCTSGLAAEARIARAAGFPVIVGAGDPHRTAALVAA
Ga0207661_109918902	3300025944	Corn Rhizosphere	MRTLTPVLCTSGLAAEAKVARAAGFQVIVGAGDLRRTAELVELAAKRAKFLISFGV
Ga0207703_107237012	3300026035	Switchgrass Rhizosphere	MRTLTPVLCTSGLAAEARIARAAGFPVIVGAGDPHRTAALVEAAAQEA
Ga0209474_103576822	3300026550	Soil	MRTLIPVLCTSGLAAEARVARAAGFQVIVGGGDPS
Ga0179587_104897292	3300026557	Vadose Zone Soil	MHRLSTVLCTSGLAAEAKIARAAGFPVVIGAGDRERTAALVESAVQGANCLI
Ga0209038_100062731	3300027737	Bog Forest Soil	MRRLLTVLCASGLAAEAKIARAAGFPVVIGAGDRERTAALVENAVQRANCLM
Ga0268264_103065681	3300028381	Switchgrass Rhizosphere	MRTLTPVLCTSGLAAEAKVARAAGCQVIVGAGDPRRTAELVEL
Ga0308200_11169761	3300030905	Soil	MHRLSTVLCTSGLAVEAKIARAAGFPVVIGAGNRARTAA
Ga0170822_123939142	3300031122	Forest Soil	MARAVCISGLAVEAKIARTAGFAVVTGAGDRDRTATLVATAAAQ
Ga0318516_100604121	3300031543	Soil	VHRLSTVLCTSGLAAEARIARAAGFPVVIGAGDRERTAALVERAVKG
Ga0318534_106448612	3300031544	Soil	MHRLSTVLFISGLAAEARIARAVGFPVVIGGGDRGRTAA
Ga0318541_101867161	3300031545	Soil	MHRLATVLCASGLAAEARIARAAGFPVVIGAGDRDRTAALVESA
Ga0318528_101019941	3300031561	Soil	MQPLATVLCTSGLKVEAKIAQAAGFSVVIGAGDRDRTAALVATAA
Ga0318528_101023981	3300031561	Soil	VHRLSTVLCTSGLAAEARIARAAGFPVVIGAGDRERTAALVERAVKGANCLVS
Ga0318573_101655451	3300031564	Soil	MHRLSTVLFISGLAAEARIARAVGFPVVIGGGDRRRTAALVERAVPG
Ga0318573_103613992	3300031564	Soil	MHRLATVLCASGLAAEARIARAAGFPVVIGAGDRDRTAALVESAVQH
Ga0318555_106383922	3300031640	Soil	MHRLSTVLCTSGLAAEAKIARAAGFPVLIGAGDRARTAALIGGAVNGANCL
Ga0318561_100070151	3300031679	Soil	VHRLSTVLCTSGLAAEARIARAAGFPVVIGAGDRERTAALVERAVTGAD
Ga0318561_102068452	3300031679	Soil	MHRLATVLCASGLAAEARIARAAGFPVVIGAGDRD
Ga0318574_103978381	3300031680	Soil	MHRLSTVLFISGLAAEARIARAVGFPVVIGGGDRG
Ga0318574_104827322	3300031680	Soil	MHRLATVLCASGLAAEARIARAAGFPVVIGAGDRDRTAALVESAVQHAKCL
Ga0318572_100218311	3300031681	Soil	MQRLATVLCTSGLAIEAKIARAAGFSAVIRAGDRDRTAALVAAT
Ga0318572_106426791	3300031681	Soil	MHRLSTVLFISGLAAEARIARAVGFPVVIGGGDRGRTAALVERAVPGA
Ga0310686_1049742762	3300031708	Soil	MRTLIPVLCTSGLAAEARVARAAGSQVIVGGGDLRRTTALVE
Ga0306917_100092207	3300031719	Soil	MQRPATVLCTSGLAVEAQIARAAGFSAVIRAGDRDRTAA
Ga0306917_100684214	3300031719	Soil	MQRSATVLCTSGLAVEAKIARAAGFSVVIRAGNRDRTAARLG
Ga0318502_105154102	3300031747	Soil	MHRLATVLCASGLAAEARIARAAGFPVVIGAGDRDRTAA
Ga0318537_100354511	3300031763	Soil	MHRLSTVLFISGLAAEARIARAVGFPVVIGGGDRR
Ga0318535_103580491	3300031764	Soil	MHRLATVLCASGLAAEARIARAAGFPVVIGAGDRDRTAALVESAVQHAKCLMS
Ga0318526_101075433	3300031769	Soil	MQRPATVLCTSGLAVEAQIARAAGFSAVIRAGDRDRTA
Ga0318521_102859982	3300031770	Soil	MHRLSTVLFISGLAAEARIARAVGFPVVIGGGDRRRTAALVEKAV
Ga0318546_1000062215	3300031771	Soil	MHRLSTVLCTSGLAAEAKIARAAGFPVLIGAGDRARTAALIGG
Ga0318543_102084071	3300031777	Soil	MHRLATVLCTSGLAAEARIARAAGFPVLIGAGDRDRTAALVESAVQHA
Ga0318557_101369231	3300031795	Soil	MHRLSTVLCTSGLAAEAKIARAAGFPVLIGAGDRAR
Ga0318576_100209803	3300031796	Soil	MHRLATVLCASGLAAEARIARAAGFPVVIGAGDRDRTAALVESAVQHAK
Ga0318550_105440102	3300031797	Soil	MHRLATVLCTSGLAAEARIARAAGFPVVIGAGDRDRTAALVE
Ga0318512_101646941	3300031846	Soil	MHRLATVLCASGLAAEARIARAAGFPVVIGAGDRDRTAALVE
Ga0318536_103008631	3300031893	Soil	MQRSATVLCTSGLAVEAKIARAAGFSVVIRAGNRDRTA
Ga0306921_111623602	3300031912	Soil	VHRLSTVLCTSGLAAEARIARAAGFPVVIGAGDRERTAALVERAVKGAN
Ga0308175_1015873882	3300031938	Soil	MRTLTPVLCTSGLAAEAKVARAAGFQVIVGAGDPRRTAELVELAAKRAKF
Ga0310910_109761672	3300031946	Soil	MHRLSTVLFISGLAAEARIARAAGFPVVIGGGDRGRTAALVERAV
Ga0310909_106208331	3300031947	Soil	MHRLSTVLCTSGLAAEARIATAAGFPVIIGGGNRERTT
Ga0307479_117890812	3300031962	Hardwood Forest Soil	MRTLIPVLCTSGLAAEARVARAAGFQVIVGGGDLRRTAALVQDAAREAECLVSFG
Ga0318518_100127551	3300032090	Soil	VHRLSTVLCTSGLAAEARIARAAGFPVVIGAGDRERTAALVERAVKGANCLV
Ga0318577_106044391	3300032091	Soil	MHRLSTVLCTSGLAAEAKIARAVGFPVVIGAGDRERTASLV
Ga0307471_1035644881	3300032180	Hardwood Forest Soil	MRPLTPVLCTSGLAAEARIARAAGFQVIVGAGDPRRTAELVEAA
Ga0348332_137548071	3300032515	Plant Litter	LLETTGPAAPLCICGLAAEAKIARAAGFSVVLGAGNRSRTTT
Ga0335077_110179592	3300033158	Soil	MHTLWPVLCTSGLAAEARVARAAGLQAIVGAGDPQRTTALVNAA

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F064159

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences