Metagenome / Metatranscriptome Family F064143

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F064143
Family Type	Metagenome / Metatranscriptome
Number of Sequences	129
Average Sequence Length	60 residues
Representative Sequence	MPTSEDYKQMANRSAQLAIACSAPSVAQALLALGLEYMALAARLGQPAEMQQDPAGFGD
Number of Associated Samples	98
Number of Associated Scaffolds	129

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	72.09 %
% of genes near scaffold ends (potentially truncated)	36.43 %
% of genes from short scaffolds (< 2000 bps)	89.15 %
Associated GOLD sequencing projects	95
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (65.116 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (40.310 % of family members)
Environment Ontology (ENVO)	Unclassified (34.884 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (38.760 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Fibrous	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 64.41% β-sheet: 0.00% Coil/Unstructured: 35.59%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 129 Family Scaffolds
PF04392	ABC_sub_bind	32.56
PF12680	SnoaL_2	1.55
PF13581	HATPase_c_2	0.78
PF09084	NMT1	0.78
PF13676	TIR_2	0.78
PF13557	Phenol_MetA_deg	0.78
PF13751	DDE_Tnp_1_6	0.78
PF13358	DDE_3	0.78
PF09361	Phasin_2	0.78
PF02518	HATPase_c	0.78

COG ID	Name	Functional Category	% Frequency in 129 Family Scaffolds
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	32.56
COG0715	ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic component	Inorganic ion transport and metabolism [P]	0.78
COG4521	ABC-type taurine transport system, periplasmic component	Inorganic ion transport and metabolism [P]	0.78

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	65.12 %
Unclassified	root	N/A	34.88 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	65.12 %
Unclassified	root	N/A	34.88 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	65.12 %
Unclassified	root	N/A	34.88 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	44.19 %
Unclassified	root	N/A	34.88 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	39.53 %
Unclassified	root	N/A	34.88 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1.55 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	34.88 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	13.95 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	4.65 %
Nitrosomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales	1.55 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	34.88 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	8.53 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	4.65 %
Sulfuricellaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Sulfuricellaceae	1.55 %
Lichenibacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Lichenibacteriaceae	0.78 %
Rhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae	0.78 %
Hyphomicrobiales incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiales incertae sedis	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	34.88 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	7.75 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	4.65 %
Sulfuriferula	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Sulfuricellaceae → Sulfuriferula	1.55 %
Lichenibacterium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Lichenibacteriaceae → Lichenibacterium	0.78 %
Pseudorhodoplanes	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiales incertae sedis → Pseudorhodoplanes	0.78 %
Rhizobium/Agrobacterium group	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	34.88 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	4.65 %
Bradyrhizobium erythrophlei	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	2.33 %
Sulfuriferula multivorans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Sulfuricellaceae → Sulfuriferula → Sulfuriferula multivorans	1.55 %
Bradyrhizobium lablabi	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium lablabi	1.55 %
Lichenibacterium minor	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Lichenibacteriaceae → Lichenibacterium → Lichenibacterium minor	0.78 %
Allorhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Allorhizobium	0.78 %
Pseudorhodoplanes sinuspersici	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiales incertae sedis → Pseudorhodoplanes → Pseudorhodoplanes sinuspersici	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	34.88 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	4.65 %
Bradyrhizobium erythrophlei	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	2.33 %
Sulfuriferula multivorans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Sulfuricellaceae → Sulfuriferula → Sulfuriferula multivorans	1.55 %
Bradyrhizobium lablabi	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium lablabi	1.55 %
Allorhizobium ampelinum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Allorhizobium → Allorhizobium ampelinum	0.78 %
Lichenibacterium minor	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Lichenibacteriaceae → Lichenibacterium → Lichenibacterium minor	0.78 %
Pseudorhodoplanes sinuspersici	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiales incertae sedis → Pseudorhodoplanes → Pseudorhodoplanes sinuspersici	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	34.88 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	4.65 %
Bradyrhizobium erythrophlei	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	2.33 %
Sulfuriferula multivorans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Sulfuricellaceae → Sulfuriferula → Sulfuriferula multivorans	1.55 %
Bradyrhizobium lablabi	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium lablabi	1.55 %
Allorhizobium ampelinum S4	strain	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Allorhizobium → Allorhizobium ampelinum → Allorhizobium ampelinum S4	0.78 %
Lichenibacterium minor	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Lichenibacteriaceae → Lichenibacterium → Lichenibacterium minor	0.78 %
Pseudorhodoplanes sinuspersici	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiales incertae sedis → Pseudorhodoplanes → Pseudorhodoplanes sinuspersici	0.78 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2209111022\|2221216674	All Organisms → cellular organisms → Bacteria	730	Open in IMG/M
3300000858\|JGI10213J12805_10123914	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1026	Open in IMG/M
3300004081\|Ga0063454_100039770	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Lichenibacteriaceae → Lichenibacterium → Lichenibacterium minor	1760	Open in IMG/M
3300005332\|Ga0066388_103060850	Not Available	854	Open in IMG/M
3300005332\|Ga0066388_103557246	Not Available	795	Open in IMG/M
3300005332\|Ga0066388_104403862	Not Available	717	Open in IMG/M
3300005455\|Ga0070663_100613116	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	917	Open in IMG/M
3300005547\|Ga0070693_101391488	All Organisms → cellular organisms → Bacteria	545	Open in IMG/M
3300005713\|Ga0066905_100061209	All Organisms → cellular organisms → Bacteria → Proteobacteria	2368	Open in IMG/M
3300005713\|Ga0066905_101574001	Not Available	600	Open in IMG/M
3300005713\|Ga0066905_101591710	Not Available	597	Open in IMG/M
3300005719\|Ga0068861_101147698	Not Available	749	Open in IMG/M
3300005937\|Ga0081455_10039654	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	4160	Open in IMG/M
3300005981\|Ga0081538_10096837	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1502	Open in IMG/M
3300005983\|Ga0081540_1186640	Not Available	769	Open in IMG/M
3300006038\|Ga0075365_10114003	Not Available	1859	Open in IMG/M
3300006038\|Ga0075365_10273924	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Allorhizobium → Allorhizobium ampelinum → Allorhizobium ampelinum S4	1187	Open in IMG/M
3300006051\|Ga0075364_10631525	Not Available	732	Open in IMG/M
3300006051\|Ga0075364_10827907	Not Available	631	Open in IMG/M
3300006163\|Ga0070715_10522970	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	683	Open in IMG/M
3300006172\|Ga0075018_10853357	Not Available	503	Open in IMG/M
3300006177\|Ga0075362_10691373	Not Available	532	Open in IMG/M
3300006847\|Ga0075431_101106200	All Organisms → cellular organisms → Bacteria	757	Open in IMG/M
3300006953\|Ga0074063_12001312	Not Available	882	Open in IMG/M
3300009094\|Ga0111539_11812687	Not Available	707	Open in IMG/M
3300009100\|Ga0075418_10316208	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium lablabi	1665	Open in IMG/M
3300009100\|Ga0075418_10648224	Not Available	1137	Open in IMG/M
3300009100\|Ga0075418_10705846	Not Available	1088	Open in IMG/M
3300009143\|Ga0099792_10325568	All Organisms → cellular organisms → Bacteria	920	Open in IMG/M
3300009610\|Ga0105340_1548045	Not Available	517	Open in IMG/M
3300010043\|Ga0126380_10093755	Not Available	1780	Open in IMG/M
3300010043\|Ga0126380_10715380	Not Available	807	Open in IMG/M
3300010043\|Ga0126380_12230986	Not Available	507	Open in IMG/M
3300010046\|Ga0126384_10111221	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2042	Open in IMG/M
3300010159\|Ga0099796_10170958	All Organisms → cellular organisms → Bacteria	867	Open in IMG/M
3300010362\|Ga0126377_11881102	Not Available	674	Open in IMG/M
3300010362\|Ga0126377_12637682	Not Available	578	Open in IMG/M
3300010371\|Ga0134125_12506363	Not Available	561	Open in IMG/M
3300012212\|Ga0150985_101593940	Not Available	512	Open in IMG/M
3300012469\|Ga0150984_108714722	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	648	Open in IMG/M
3300012683\|Ga0137398_10994328	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	582	Open in IMG/M
3300012924\|Ga0137413_10260659	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Sulfuricellaceae → Sulfuriferula → Sulfuriferula multivorans	1194	Open in IMG/M
3300012944\|Ga0137410_11064864	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	691	Open in IMG/M
3300012948\|Ga0126375_11083844	Not Available	659	Open in IMG/M
3300012986\|Ga0164304_10777341	Not Available	736	Open in IMG/M
3300012989\|Ga0164305_10881418	Not Available	750	Open in IMG/M
3300012989\|Ga0164305_12015956	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	527	Open in IMG/M
3300013308\|Ga0157375_12551128	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	610	Open in IMG/M
3300015242\|Ga0137412_10206757	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Sulfuricellaceae → Sulfuriferula → Sulfuriferula multivorans	1566	Open in IMG/M
3300015371\|Ga0132258_10071074	All Organisms → cellular organisms → Bacteria	8070	Open in IMG/M
3300015371\|Ga0132258_10357443	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3614	Open in IMG/M
3300015371\|Ga0132258_10842164	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2314	Open in IMG/M
3300015371\|Ga0132258_11398304	Not Available	1768	Open in IMG/M
3300015372\|Ga0132256_101305875	Not Available	838	Open in IMG/M
3300015374\|Ga0132255_100249870	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2533	Open in IMG/M
3300015374\|Ga0132255_100753630	Not Available	1449	Open in IMG/M
3300015374\|Ga0132255_102907564	All Organisms → cellular organisms → Bacteria → Proteobacteria	732	Open in IMG/M
3300017997\|Ga0184610_1114325	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	865	Open in IMG/M
3300018027\|Ga0184605_10061744	All Organisms → cellular organisms → Bacteria	1610	Open in IMG/M
3300018027\|Ga0184605_10168888	Not Available	988	Open in IMG/M
3300018051\|Ga0184620_10138654	Not Available	779	Open in IMG/M
3300018054\|Ga0184621_10069033	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	1212	Open in IMG/M
3300018066\|Ga0184617_1228823	Not Available	556	Open in IMG/M
3300018071\|Ga0184618_10222568	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	793	Open in IMG/M
3300018073\|Ga0184624_10029735	All Organisms → cellular organisms → Bacteria	2105	Open in IMG/M
3300018074\|Ga0184640_10384145	Not Available	634	Open in IMG/M
3300018465\|Ga0190269_11880724	Not Available	515	Open in IMG/M
3300018466\|Ga0190268_10419015	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	871	Open in IMG/M
3300018476\|Ga0190274_13324760	Not Available	542	Open in IMG/M
3300019255\|Ga0184643_1214588	All Organisms → cellular organisms → Bacteria	525	Open in IMG/M
3300019867\|Ga0193704_1094592	Not Available	529	Open in IMG/M
3300019875\|Ga0193701_1056983	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	784	Open in IMG/M
3300020016\|Ga0193696_1130365	Not Available	632	Open in IMG/M
3300021078\|Ga0210381_10026541	All Organisms → cellular organisms → Bacteria	1593	Open in IMG/M
3300021078\|Ga0210381_10041796	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium lablabi	1341	Open in IMG/M
3300021078\|Ga0210381_10302830	All Organisms → cellular organisms → Bacteria	577	Open in IMG/M
3300021363\|Ga0193699_10025560	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2181	Open in IMG/M
3300021363\|Ga0193699_10036103	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1871	Open in IMG/M
3300021415\|Ga0193694_1057395	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	529	Open in IMG/M
3300021968\|Ga0193698_1006266	All Organisms → cellular organisms → Bacteria	1474	Open in IMG/M
3300022756\|Ga0222622_10156544	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1474	Open in IMG/M
3300022756\|Ga0222622_11393152	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	516	Open in IMG/M
3300025933\|Ga0207706_10468232	Not Available	1089	Open in IMG/M
3300026118\|Ga0207675_102446166	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	534	Open in IMG/M
3300027909\|Ga0209382_11002637	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiales incertae sedis → Pseudorhodoplanes → Pseudorhodoplanes sinuspersici	870	Open in IMG/M
3300028708\|Ga0307295_10119854	Not Available	718	Open in IMG/M
3300028710\|Ga0307322_10017733	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1621	Open in IMG/M
3300028711\|Ga0307293_10253324	All Organisms → cellular organisms → Bacteria	559	Open in IMG/M
3300028712\|Ga0307285_10101138	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	762	Open in IMG/M
3300028712\|Ga0307285_10243492	Not Available	510	Open in IMG/M
3300028715\|Ga0307313_10094988	All Organisms → cellular organisms → Bacteria	903	Open in IMG/M
3300028718\|Ga0307307_10298727	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	518	Open in IMG/M
3300028744\|Ga0307318_10092174	All Organisms → cellular organisms → Bacteria	1022	Open in IMG/M
3300028755\|Ga0307316_10120279	All Organisms → cellular organisms → Bacteria	925	Open in IMG/M
3300028768\|Ga0307280_10310561	Not Available	576	Open in IMG/M
3300028771\|Ga0307320_10256302	All Organisms → cellular organisms → Bacteria	690	Open in IMG/M
3300028771\|Ga0307320_10469782	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	508	Open in IMG/M
3300028778\|Ga0307288_10011283	All Organisms → cellular organisms → Bacteria	2754	Open in IMG/M
3300028778\|Ga0307288_10094703	All Organisms → cellular organisms → Bacteria → Proteobacteria	1081	Open in IMG/M
3300028778\|Ga0307288_10221617	All Organisms → cellular organisms → Bacteria	734	Open in IMG/M
3300028796\|Ga0307287_10274212	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	638	Open in IMG/M
3300028807\|Ga0307305_10034212	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	2328	Open in IMG/M
3300028807\|Ga0307305_10081418	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1495	Open in IMG/M
3300028811\|Ga0307292_10023553	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2185	Open in IMG/M
3300028819\|Ga0307296_10147891	All Organisms → cellular organisms → Bacteria	1268	Open in IMG/M
3300028819\|Ga0307296_10412089	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	739	Open in IMG/M
3300028819\|Ga0307296_10465622	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	691	Open in IMG/M
3300028828\|Ga0307312_10034158	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2978	Open in IMG/M
3300028872\|Ga0307314_10026926	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1344	Open in IMG/M
3300028872\|Ga0307314_10134907	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	702	Open in IMG/M
3300028876\|Ga0307286_10402789	Not Available	513	Open in IMG/M
3300028878\|Ga0307278_10467236	All Organisms → cellular organisms → Bacteria	552	Open in IMG/M
3300028880\|Ga0307300_10036760	All Organisms → cellular organisms → Bacteria	1352	Open in IMG/M
3300028885\|Ga0307304_10112779	All Organisms → cellular organisms → Bacteria	1099	Open in IMG/M
3300030986\|Ga0308154_116881	All Organisms → cellular organisms → Bacteria	523	Open in IMG/M
3300030990\|Ga0308178_1024777	All Organisms → cellular organisms → Bacteria	982	Open in IMG/M
3300031093\|Ga0308197_10030621	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	1261	Open in IMG/M
3300031094\|Ga0308199_1047355	All Organisms → cellular organisms → Bacteria	830	Open in IMG/M
3300031123\|Ga0308195_1062732	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	562	Open in IMG/M
3300031184\|Ga0307499_10055818	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	982	Open in IMG/M
3300031198\|Ga0307500_10007877	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	2180	Open in IMG/M
3300031198\|Ga0307500_10127672	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	708	Open in IMG/M
3300031421\|Ga0308194_10173767	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	680	Open in IMG/M
3300031474\|Ga0170818_115456233	All Organisms → cellular organisms → Bacteria → Proteobacteria	541	Open in IMG/M
3300031720\|Ga0307469_12255940	Not Available	531	Open in IMG/M
3300031740\|Ga0307468_100806032	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	801	Open in IMG/M
3300032174\|Ga0307470_10272859	All Organisms → cellular organisms → Bacteria	1131	Open in IMG/M
3300032205\|Ga0307472_100239060	Not Available	1415	Open in IMG/M
3300034681\|Ga0370546_074367	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	561	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	77.52%
Host-Associated	Host-Associated	22.48%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	64.34%
Plants	Host-Associated → Plants	22.48%
Aquatic	Environmental → Aquatic	13.18%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	64.34%
Sediment	Environmental → Aquatic → Sediment	10.08%
Rhizoplane	Host-Associated → Plants → Rhizoplane	9.30%
Rhizosphere	Host-Associated → Plants → Rhizosphere	8.53%
Roots	Host-Associated → Plants → Roots	4.65%
Freshwater	Environmental → Aquatic → Freshwater	3.10%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	57.36%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	10.08%
Loam	Environmental → Terrestrial → Soil → Loam	6.98%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	6.20%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	5.43%
Sediment	Environmental → Aquatic → Freshwater → Sediment	3.10%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	3.10%
Soil	Host-Associated → Plants → Rhizosphere → Soil	3.10%
Bulk Soil	Host-Associated → Plants → Roots → Bulk Soil	3.88%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.78%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	52.71%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	10.08%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	6.20%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	5.43%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	4.65%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	3.10%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	3.10%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	3.10%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	3.88%
Unclassified	Host-Associated → Plants → Roots → Bulk Soil → Unclassified	3.88%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	1.55%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	0.78%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.78%
Unclassified	Host-Associated → Plants → Roots → Rhizosphere → Unclassified	0.78%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	40.31%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	6.98%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	5.43%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	5.43%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	4.65%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	4.65%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	4.65%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	3.10%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	3.10%
Populus Endosphere	Host-Associated → Plants → Roots → Bulk Soil → Unclassified → Populus Endosphere	3.88%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	1.55%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.55%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	1.55%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.55%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	1.55%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	0.78%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.78%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.78%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.78%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grass Soil	0.78%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.78%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.78%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.78%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	0.78%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Unclassified → Tabebuia Heterophylla Rhizosphere	0.78%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.78%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.78%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	0.78%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2209111022	Grass soil microbial communities from Rothamsted Park, UK - Chitin enrichment	Environmental	Open in IMG/M
3300000858	Soil microbial communities from Great Prairies - Wisconsin Native Prairie soil	Environmental	Open in IMG/M
3300004081	Grasslands soil microbial communities from Hopland, California, USA - 2 (version 2)	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005455	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG	Host-Associated	Open in IMG/M
3300005547	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005719	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2	Host-Associated	Open in IMG/M
3300005937	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1	Host-Associated	Open in IMG/M
3300005981	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1	Host-Associated	Open in IMG/M
3300005983	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1	Host-Associated	Open in IMG/M
3300006038	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5	Host-Associated	Open in IMG/M
3300006051	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4	Host-Associated	Open in IMG/M
3300006163	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG	Environmental	Open in IMG/M
3300006172	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2014	Environmental	Open in IMG/M
3300006177	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2	Host-Associated	Open in IMG/M
3300006847	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5	Host-Associated	Open in IMG/M
3300006953	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHMB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300009610	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT700	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010159	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012683	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaG	Environmental	Open in IMG/M
3300012924	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012986	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300015242	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300017997	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100_coex	Environmental	Open in IMG/M
3300018027	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_coex	Environmental	Open in IMG/M
3300018051	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_5_b1	Environmental	Open in IMG/M
3300018054	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_b1	Environmental	Open in IMG/M
3300018066	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_5_b1	Environmental	Open in IMG/M
3300018071	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_b1	Environmental	Open in IMG/M
3300018073	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_5_b1	Environmental	Open in IMG/M
3300018074	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_200_b2	Environmental	Open in IMG/M
3300018465	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 IS	Environmental	Open in IMG/M
3300018466	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 T	Environmental	Open in IMG/M
3300018476	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 T	Environmental	Open in IMG/M
3300019255	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019867	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3m1	Environmental	Open in IMG/M
3300019875	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3s2	Environmental	Open in IMG/M
3300020016	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3m1	Environmental	Open in IMG/M
3300021078	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_5_coex redo	Environmental	Open in IMG/M
3300021363	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3c2	Environmental	Open in IMG/M
3300021415	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3s1	Environmental	Open in IMG/M
3300021968	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3c1	Environmental	Open in IMG/M
3300022756	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1	Environmental	Open in IMG/M
3300025933	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026118	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300028708	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_152	Environmental	Open in IMG/M
3300028710	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_380	Environmental	Open in IMG/M
3300028711	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_150	Environmental	Open in IMG/M
3300028712	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_139	Environmental	Open in IMG/M
3300028715	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_203	Environmental	Open in IMG/M
3300028718	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_194	Environmental	Open in IMG/M
3300028744	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_367	Environmental	Open in IMG/M
3300028755	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_356	Environmental	Open in IMG/M
3300028768	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_119	Environmental	Open in IMG/M
3300028771	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_369	Environmental	Open in IMG/M
3300028778	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_142	Environmental	Open in IMG/M
3300028796	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_141	Environmental	Open in IMG/M
3300028807	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_186	Environmental	Open in IMG/M
3300028811	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_149	Environmental	Open in IMG/M
3300028819	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_153	Environmental	Open in IMG/M
3300028828	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_202	Environmental	Open in IMG/M
3300028872	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_204	Environmental	Open in IMG/M
3300028876	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_140	Environmental	Open in IMG/M
3300028878	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_117	Environmental	Open in IMG/M
3300028880	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_181	Environmental	Open in IMG/M
3300028885	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_185	Environmental	Open in IMG/M
3300030986	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_143 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030990	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_149 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031093	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_198 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031094	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_203 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031123	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_196 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031184	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 13_S	Environmental	Open in IMG/M
3300031198	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 14_S	Environmental	Open in IMG/M
3300031421	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_195 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031474	Fir Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300034681	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_121 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
2222061219	2209111022	Grass Soil	GRRRGGRTMPTSEDYKQMANRSAQLAIACSAPSVAQTLLALGLEYMALAARLGQAAEMQQDPAGFGD
JGI10213J12805_101239141	3300000858	Soil	MPTSEDYRQMADRSAQLAIACSAPSVAEALLALGLDYMALAARLGQRADMQQDPAGFGD*
Ga0063454_1000397701	3300004081	Soil	MPTSEDYKQMANRSAQLAIACSTPSVAQALLALGSEYMALAARLGQAAEMQQDPAGFGD*
Ga0066388_1030608502	3300005332	Tropical Forest Soil	MATSEDYRQMANRSVQLAIGCAAPSVAQVLLALALDYMVLAAKHGNPAAAQHQHMRQDPAGFGD*
Ga0066388_1035572461	3300005332	Tropical Forest Soil	MATSEDYRQMANRSAQLAIGCAAPSVAQALLALALDYMALAAKHGQPAAGQHLHMRQDPAGFGD*
Ga0066388_1044038622	3300005332	Tropical Forest Soil	MATSEDYRQMANRSAQLAIGCAAPSVAQALLALALDYMALAAKHGQLAAAQHLHMRQDPAGFGD*
Ga0070663_1006131162	3300005455	Corn Rhizosphere	MPTPEDYRQMANRCAQLAIACSAPSIAQTLLTLGLDYMALAARLGQPAEMQQDPAGFGD*
Ga0070693_1013914882	3300005547	Corn, Switchgrass And Miscanthus Rhizosphere	MPSSEDYRQMANRSAQLAIGCSAPSVAQALLALGSEYMALAARLGQAAEMQQDPAGFGD*
Ga0066905_1000612092	3300005713	Tropical Forest Soil	MATSEDYRQMANRSAQLAIGCAAPSVAQALLALALDYMALAAKHGQPAGAQHQYMRQDPAGFGD*
Ga0066905_1015740012	3300005713	Tropical Forest Soil	MATSEDYRQVANRSAQLAIGCAAPSVAQALLALALDYMALAAKHGQPAA
Ga0066905_1015917101	3300005713	Tropical Forest Soil	MASSEDYRQMANRSAQLAIGCAAPSVAQALLALALDYMALAAEHGQPAGAQHQHMRQDPAGFGD
Ga0068861_1011476982	3300005719	Switchgrass Rhizosphere	MPTSEDYKQMANRSAQLAIALSAPSVAQALFALGLEYMALAARLGQAAEMQQDPAGFGD*
Ga0081455_100396541	3300005937	Tabebuia Heterophylla Rhizosphere	MATSEDYRQMANRSAQLAIGCAAPSVAQALLALALDYMALAVKHGQPAGRQHQHMRQDPAGFGD*
Ga0081538_100968373	3300005981	Tabebuia Heterophylla Rhizosphere	MVTSEDYRQMANQSAQLAIGCAAPSVAQALLALALDYMALAAKHGQPAAAQHQHMRQDPAGFGD*
Ga0081540_11866402	3300005983	Tabebuia Heterophylla Rhizosphere	MATSEDYRQMANRSAQLAIGCAAPSVAQALLALALDYMALAAKHGHPAAAQHLHMRQDPAGFGD*
Ga0075365_101140031	3300006038	Populus Endosphere	MATSEDYRQVANRSAQLAIACSTPSVAQALLALALDYMALAAKPGQPGAARQQHQHMRQDPAGFGD*
Ga0075365_102739242	3300006038	Populus Endosphere	MATSEDYRQMANRSAQLAIGCAAPSVAQALLALALDYMALAAKHGQPAAAQHLHMRQDPGGFGD*
Ga0075364_106315252	3300006051	Populus Endosphere	MATSEDYRRMANRSAQLAIGCAAPSVAQALLALALDYMALAAKHGQPAAAQHLHMRQDPGGFGD*
Ga0075364_108279071	3300006051	Populus Endosphere	MATSEDYRQVANRSAQLAIACSTPSVAQALLALALDYMALAAKPGQPGAARQQHQHMRQD
Ga0070715_105229702	3300006163	Corn, Switchgrass And Miscanthus Rhizosphere	EDYRQMANRSAQLAIACSAPSVAQALLALALDYMAVAAKHGQPEAATHQHMRQDPAGFGD
Ga0075018_108533571	3300006172	Watersheds	MPTSEDYRQTANRSAQLAIACSAPSVAQALLALGLEYMTLADRLGQPTEMQQDPAGFGD*
Ga0075362_106913732	3300006177	Populus Endosphere	MATSEDYRQMANRSAQLAIGCAAPSVAQALLALALDYMALAAKHGQPAAAQHLHMRQDPAGFGD*
Ga0075431_1011062003	3300006847	Populus Rhizosphere	MGTCEDYRQMANRSAQLAIGCAAPSVAQALLALALDYMALAAKHGQPAAAQHQHMRQDPAGFGD*
Ga0074063_120013124	3300006953	Soil	MPTPEDYRQMANRCAQLAIASSAPSIAQTLLALGLDYMALAARLGQPAEMQQDPAGFGD*
Ga0111539_118126872	3300009094	Populus Rhizosphere	MATFEDYRQMANRSAQLAIACSAPSVAQAFLALALDYMALAAKPGQPGAARQQHQHMRQDPAGFGD*
Ga0075418_103162081	3300009100	Populus Rhizosphere	MATSEDYRQMANRSAQLAIGCAAPSVAQALLALALDYMALAAKPGQPGAARQQHQHMRQDPAGFGD*
Ga0075418_106482241	3300009100	Populus Rhizosphere	MATSEDYRQMANRSAQLAIGCAAPSVAQALLALALDYMALAAKHGQPAAAQHLHIRQDPGGFGD*
Ga0075418_107058461	3300009100	Populus Rhizosphere	MPTSEEYRQMANRSAQIAIACSTPSVAHALLALGLKYMEMAARLDQPAEPQQRSAGYGD*
Ga0099792_103255682	3300009143	Vadose Zone Soil	MATSEDYKQMANRCAQLAIACSAPSVAQTLLALGLEYMALAARLGQPAEMQQDPAGFGD*
Ga0105340_15480452	3300009610	Soil	PTSEDYKQMANRSAQLAIGCSAPSVAQALLALGLEYMALAARLGEPAAMRQDPAGFGD*
Ga0126380_100937553	3300010043	Tropical Forest Soil	MATSEDYRQMANRSAQLAIGCAAPSVAQALLALALDYMALAAEHGQPAGAQHQHMRQDPAGFGD*
Ga0126380_107153802	3300010043	Tropical Forest Soil	MATSEDYRQMANRYAQLAIACSAPSVAQALLAVALDYMWLAAKCGQTATARQQHHHMLQDPAGFGD*
Ga0126380_122309861	3300010043	Tropical Forest Soil	MATSEDYQQMANRSAHLAMACSAPSVAQAFLALALDYMALAAKHGRPAAATQQHRHMRQDPAGFGD*
Ga0126384_101112213	3300010046	Tropical Forest Soil	MATSEDYRQMANRSAQLAIGCAAPSVAQVLLALALDYMALAAEHGQPAGAQHQHMRQDPAGFGD*
Ga0099796_101709581	3300010159	Vadose Zone Soil	DYKQMGNRCAQLAIACPAPSVAQTLLALGLEYMALAARLGQPAEMQQDPAGFGD*
Ga0126377_118811022	3300010362	Tropical Forest Soil	MATSEDYRQMANRSVQLAIGCAAPSVAQVLLAIALDYMVLAAKHGNPAGAQHQHMRQDPAGFGD*
Ga0126377_126376821	3300010362	Tropical Forest Soil	AMATCEDYRQMADRSAQLAIGCAAPSVAQALLALALDYMALAAKHGQPAAGQHLHMRQDPAGFGD*
Ga0134125_125063631	3300010371	Terrestrial Soil	MANRSAQLAIGCSAPSVAQALLALGLEYMALAARLGEPAAMRQDPAGFEDLVGRQENWVELNALAD*
Ga0150985_1015939402	3300012212	Avena Fatua Rhizosphere	MPTSEDYRQMADRSAQLAVGCSAPSVAQALLALGLEYMALAARLSEPAAMRQDPAGFGD*
Ga0150984_1087147221	3300012469	Avena Fatua Rhizosphere	MPTSEDYKQMANRSAQLAIACSAPSVAQALFALGLEYMVLAARLGQAAEMQQDPAGFGD*
Ga0137398_109943282	3300012683	Vadose Zone Soil	MATSEDYKQMGNRCAQLAIACPAPSVAQTLLALGLEYMALAARLGQAAEMQQDPAGFGD*
Ga0137413_102606592	3300012924	Vadose Zone Soil	MPTSEDCKQMANRSAQLAIACSAPSVAQALLALGSEYMALAARLGQAAEMQQDPAGFGD*
Ga0137410_110648641	3300012944	Vadose Zone Soil	MPTSEDYKQMANRSAQLAIACSAPSVAQALFALGLEYMALAARLGQAAEMQQDPAGFGD*
Ga0126375_110838441	3300012948	Tropical Forest Soil	MATCEDYRQMANRSAQLAIGCAAPSVAQALLALALDYMALAAKHGQPAAAQHL
Ga0164304_107773412	3300012986	Soil	MPSSEDYRQMANRSAQLAIGCSAPSVAQALLALGLEYMALAARLSEPAAMRQDPAGFVD*
Ga0164305_108814181	3300012989	Soil	MPTSEDYKQMANRSAQLAIACSAPSVAQALLALGLEYMALAARLSEPAAMRQDPAGFGD*
Ga0164305_120159561	3300012989	Soil	MATSEDYKQMANRSAQLAIACSAPSVAQALFALGLEYMALAARLGQPAEMQQDPAGFGD*
Ga0157375_125511281	3300013308	Miscanthus Rhizosphere	MPTPEDYRQMANRCAQLAIACSAPSIAQTLLALGLDYMALAARLGQPAEMQQDPAG
Ga0137412_102067573	3300015242	Vadose Zone Soil	MPTSEDCKQMANRSAQLAIACSAPSVAQALFALGLEYMALAARLGQAAEMQQDPAGFGD*
Ga0132258_1007107410	3300015371	Arabidopsis Rhizosphere	MATCEDYRQMADRSAQLAIGCAAPSVAQALLALALDYMALAAEHGQPAAAQHQHMRQDPAGFGD*
Ga0132258_103574433	3300015371	Arabidopsis Rhizosphere	MGTCEDYRQRANRSAQLAIGCAAPSVAQALLALALDYMALAAKHGQPAAAQHQHMRQDPAGFGD*
Ga0132258_108421641	3300015371	Arabidopsis Rhizosphere	MGTCEDYRQMANRSAQLAMGCAAPSVAQALLALALDYMALAAKYGQPALGQQHMRQDPAGFGD*
Ga0132258_113983041	3300015371	Arabidopsis Rhizosphere	MATTEDYRQMANRSAQIAIASSAPSVAQALLALALDYMALAAKPGQPGAGRQQHLHLHQDPAGFGD*
Ga0132256_1013058751	3300015372	Arabidopsis Rhizosphere	RSAQLAIGCAAPSVAQALLALALDYMALAAKDGQPAGRQHQHMRQDPAGFGD*
Ga0132255_1002498702	3300015374	Arabidopsis Rhizosphere	MPTPEDYRQMANRCAQLAIACSAPSIAQPLLTLGLDYMALAARLGQPAEMQQDPAGFGD*
Ga0132255_1007536301	3300015374	Arabidopsis Rhizosphere	YRQMANRSAQLAIGCAAPSVAQALLALALDYMALAAEHGQPAGAQHQHMRQDPAGFGD*
Ga0132255_1029075642	3300015374	Arabidopsis Rhizosphere	MPTSEDYKQMANRSAQLAIACSAPSVAQALLALGLEYMALAARLGQAAEMQQDPAGFGD*
Ga0184610_11143252	3300017997	Groundwater Sediment	MPTSEDYKQMANRSAQLAIACSAPSVAQALLALGLEYMALAARLGQAAEMQQDPAGFGD
Ga0184605_100617442	3300018027	Groundwater Sediment	MATSEDYKQMANRCAQLAIACSAPSVAQTLLALGLEYMALAARLGQPAEMQQDPAGFGD
Ga0184605_101688882	3300018027	Groundwater Sediment	MPTSEDYKQMANRSAQLAIACSAPSVAQALLALGLEYMALAARLGQPAEMQQDPAGFGD
Ga0184620_101386541	3300018051	Groundwater Sediment	TANRSAQLAIACSAPSVAQALLALGLEYMTLAARLGQPAEMQQDPASFGD
Ga0184621_100690331	3300018054	Groundwater Sediment	QMANRSAQLAIACSAPSVAQALFALGLEYMALAARLGQAAEMQQDPAGFGD
Ga0184617_12288231	3300018066	Groundwater Sediment	MPTSEDYKQMANRSAQLAIACSAPSVAQALFALGLEYMVLAARLGQAAEMQQDPAGFGD
Ga0184618_102225682	3300018071	Groundwater Sediment	MPTSEDYKQMANRSAQLAIACSAPRVAQALLALGLEYMALAARLGQPTELQQDPAGFGD
Ga0184624_100297351	3300018073	Groundwater Sediment	GRTMPTSEDYKQMANRSAQLAIACCAPSVAQALFALGLEYMVLAARLGQAAEMQQDPAGFGD
Ga0184640_103841452	3300018074	Groundwater Sediment	MPTSEDYRQMANRSAQLAIGCSAPSVAQALLALGLEYMALAARLGQPAEMLQDPAGFGD
Ga0190269_118807242	3300018465	Soil	MPTSEDYRQMANPSAQLAIGCSAPSVAQALLALGLEYMALAARPGEQAAMRQDPAGFGD
Ga0190268_104190153	3300018466	Soil	MANRSAQLAIGCSAPSVAQALLALGLEYMALAARLGEPAAMRQDPAGFGD
Ga0190274_133247601	3300018476	Soil	MPTSEDYRQMANRSAQLAIGCSAPSDAQALLALGLEYMALAARLGEPAPMRQDPAGFGD
Ga0184643_12145882	3300019255	Groundwater Sediment	GGRTMPTSEDYKQMANRSAQLAIACCAPSVAQALFALGLEYMALAARLGQPAEMQQDPAGFGD
Ga0193704_10945921	3300019867	Soil	ANRSAQLAIACSAPSVAQALLALGLEYMALAARLGQPAEMQQDPAGFGD
Ga0193701_10569832	3300019875	Soil	EDYKQMANRSAQLAIACSAPSVAQALLALGLEYMALAARLGQPAEMQQDPAGFGD
Ga0193696_11303651	3300020016	Soil	MPTPEDYRQMANRCAQLAIACSAPSIAQTLLALGLDYMALAARLGQPAEMQQDPAGFGD
Ga0210381_100265412	3300021078	Groundwater Sediment	MPTPEDYRQMANRCAQLAIASSAPSIAQTLLALGLDYMALAARLGQPAEMQQDPAGFGD
Ga0210381_100417963	3300021078	Groundwater Sediment	NRSAQLAIACSAPSVAQALLALGLEYMALAARLGQPAEMLQDPAGFGD
Ga0210381_103028301	3300021078	Groundwater Sediment	MPTSEDYKQMANRSAQLAIACSAPSVAQALLALGLEYMALAARLGQPTEMQQDPAGFG
Ga0193699_100255603	3300021363	Soil	MPTSEDYKQMANRSAQLAIACCAPSVAQALFALGLEYMALAARLGQAAEMQQDPAGFGD
Ga0193699_100361032	3300021363	Soil	MPTPEDYRQMANRCAQLAIACSAPSIAQTLLALGLDYMALAARLGRPAEMQQDPAGFGD
Ga0193694_10573951	3300021415	Soil	MPTSEDYKQMANRSAQLAIACCAPSVAQALFALGLEYMALAARLGQPAEMQQDPAGFGD
Ga0193698_10062661	3300021968	Soil	MATSEDYKQMANRCAQLAIACSAPSVAQALLALGLEYMALAARLGQPAEMQQDPAGFGD
Ga0222622_101565442	3300022756	Groundwater Sediment	MPTSEDYKQMANRSAQLAIACSAPSVAQALLALGLEYMALAARLGQPAEMLQDPAGFGD
Ga0222622_113931521	3300022756	Groundwater Sediment	PIDQLGRRRGGRTMPTSEDYKQMANRSAQLAIACSAPSVAQALFALGLEYMVLAARLGQAAEMQQDPAGFGD
Ga0207706_104682322	3300025933	Corn Rhizosphere	MPTPEDYRQMANRCAQLAIACSAPNVAQTLLALGLEYMALAARLGQPAEMQQDPAGFGD
Ga0207675_1024461662	3300026118	Switchgrass Rhizosphere	MPTSEDYKQMANRSAQLAIACSAPSVAQALLALGSEYMALAARLGQAAEMQQDPAGFGD
Ga0209382_110026372	3300027909	Populus Rhizosphere	MATSEDYRQMANRSAQLAIGCAAPSVAQALLALALDYMALAAKHGQPAAAQHLHMRQDPAGFGD
Ga0307295_101198541	3300028708	Soil	MPTSEDYRQTANRSAQLAIACSAPSVAQALLALGLEYMALAARLGQPAEMQQDPAGFGD
Ga0307322_100177331	3300028710	Soil	MATSEDYKQMANRCAQLAIACSAPNVAQTLLALGLEYMALAARLGQPAEMQQDPAGFGD
Ga0307293_102533241	3300028711	Soil	MPTSEDYKQMANRSAQLAIACSAPSVAQALLALGLEYMALAARLGQPAEMQQDPAGF
Ga0307285_101011381	3300028712	Soil	MPTSEDYKQMANRSAQLAIACSAPSVAQALFALGLEYMALAARLGQAAEMQQDPAGFGD
Ga0307285_102434921	3300028712	Soil	MPTSEDYKQMANRSAQLAIACSAPSVAQALLALGSEYMALAARLGEAAEMQQDPA
Ga0307313_100949881	3300028715	Soil	EDYKQMANRSAQLAIACSAPSVAQALLALGLEYMALAARLGQPTEMQQDPAGFGD
Ga0307307_102987271	3300028718	Soil	PTSEDYRQTANRSAQLAIACSAPSVAQALLALGLEYMALAARLGQPTEMQQDPAGFGD
Ga0307318_100921742	3300028744	Soil	MATSEDYKQMANRCAQLAIACSAPSVAQTLLALGLEYMALAAKLGQPAEMQQDPAGFGD
Ga0307316_101202791	3300028755	Soil	DQLGRRRGGRVMPTSEDYKQMANRSAQLAIACSAPSVAQALLALGLEYMALAARLGQPTEMQQDPAGFGD
Ga0307280_103105612	3300028768	Soil	DYRQTANRSAQLAIACSAPSVAQALLALGLEYMALAARLGQPAEMQQDPAGFGD
Ga0307320_102563022	3300028771	Soil	RQTANRSAQLAIACSAPSVAQALLALGLEYMALAARLGQPAEMQQDPAGFGD
Ga0307320_104697822	3300028771	Soil	MANRSAQLAIACSAPSVAQALLALGLEYMALAARLGQAAEMQQDPAGFGD
Ga0307288_100112832	3300028778	Soil	MATSEDYKQMANRCAQLAIACSAPSVAQTLLALGLEYMALAAKLGRPAEMQQDPAGFGD
Ga0307288_100947032	3300028778	Soil	MPTSEDYKQMANRSAQLAIACSAPSVAQALLALGLEYMALAARLGQPTEMQQDPAGFGD
Ga0307288_102216171	3300028778	Soil	MPTSEDYKQMANRSVQLAIACSAPSVAQALLALGLEYMALAARLGQPTEMQQDPAG
Ga0307287_102742121	3300028796	Soil	QMANRSAQLAIACSAPSVAQALLALGLEYMALAARLGQPAEMQQDPAGFGD
Ga0307305_100342123	3300028807	Soil	MATSEDYRQMANRSAQLAIACSPPSVAHALLALAMDYMALAAKPGQPAAARQQHQHMRQDPAGFGD
Ga0307305_100814182	3300028807	Soil	MPTSEDYKQMANRSAQLAIACSAPSVAQALLALGLEYMALAARLGQPAEMEQDPAGFGD
Ga0307292_100235531	3300028811	Soil	PTSEDYRQTANRSAQLAIACSAPSVAQALLALGLEYMALAARLGQPAEMQQDPAGFGD
Ga0307296_101478911	3300028819	Soil	EIELAANRPLGRRQGGRAMPTSEDYRQTANRSAELAIACSAPSVAQALLALGLEYMALAARLGQPAEIQQDPAGFGD
Ga0307296_104120891	3300028819	Soil	MPTSEDYKQMANRSAQLAIACSAPSVAQVLLALGLEYMALAARLGRPSEMQQDPAGFGD
Ga0307296_104656222	3300028819	Soil	MPTSEDYKQMANRSAQLAIACSAPSVAQALLALGLEYMALAARLGRPSEMQQDPAGFGD
Ga0307312_100341582	3300028828	Soil	MATSEDYKQMANRCAQLAIACSAPRVAQTLLALGLEYMALAAKLGQPAEMQQDPAGFGD
Ga0307314_100269261	3300028872	Soil	HRGGRTMPTSEDYKQMANRSAQLAIACSAPSVAQALLALGLEHMALAARLGQPAEMEQDPAGFGD
Ga0307314_101349071	3300028872	Soil	MPTSEDYKQMANRSAQLAIACSAPSVAQALFALGVEYMVLAARLGQAAEMQQDPAGFGD
Ga0307286_104027891	3300028876	Soil	MPTSEDYKQMANRSAQLAILCSAPSVAQALLALGLEYMALAARLGQPTEMQQ
Ga0307278_104672361	3300028878	Soil	EDYKQMANRSAQLAIACSAPSVAQALLALGLEYMALAARLGQAAEMQQDPAGFGD
Ga0307300_100367601	3300028880	Soil	WPIDRLGRRRGGRTMATSEDYKQMANRCAQLAIACSAPSVAQTLLALGLEYMALAARLGQPAEMQQDPAGFGD
Ga0307304_101127792	3300028885	Soil	MPTSEDYKQMANRSAQLAIACSAPSVAQALLALGLEYMALAARLGQAAEMQQD
Ga0308154_1168811	3300030986	Soil	IDQLGRRRGGRTMPTSEDYKQMANRSAQLAIACSAPSVAQALLALGLEYMALAARLGQPAEMLQDPAGFGD
Ga0308178_10247772	3300030990	Soil	DQLGRRRGGRTMPTSEDYKQMANRSAQLAIACSAPSVAQALLALGLEYMALAARLGQPAEMQQDPAGFGD
Ga0308197_100306211	3300031093	Soil	DQLSRRRGGRTMPTSEDYKQMANRSAQLAIACSAPSVAQALLALGLEYMALAARLGQPAEMQQDPAGFGD
Ga0308199_10473552	3300031094	Soil	PTPEDYRQMANRCAQLAIASSAPSIAQTLLALGLDYMALAARLGQPAEMQQDPAGFGD
Ga0308195_10627322	3300031123	Soil	RGGWAMPTSEDYRQTANRSAQLAIACSAPSVAQALLALGLEYMALAARLGQPAEMQQDPAGFGD
Ga0307499_100558182	3300031184	Soil	MPTSEDYKQMANRSAQLAIACSTPSVAQALLALGSEYMALAARLGQAAEMQQDPAGFGD
Ga0307500_100078775	3300031198	Soil	MPTSEDYKQMANRSAQLAIECSAPSVAQALLALGSEYMALAARLGQAAEMQQDPAGFGD
Ga0307500_101276721	3300031198	Soil	PTSEDYKQMANRSAQLAIACSAPSVAQALFALGLEYMALAARLGEPAPMRQDPAGFGD
Ga0308194_101737671	3300031421	Soil	TSEDYKQMANRCAQLAIACSAPSVAQTLLALGLEYMALAAKLGQPAEMQQDPAGFGD
Ga0170818_1154562331	3300031474	Forest Soil	MPTSEDYRQMANRSAQLAIGCSAPSIAQALLALGLEYMALAARLGEPAAMRQDPAGFGD
Ga0307469_122559402	3300031720	Hardwood Forest Soil	MATSEDYRQMANRSAQLAIGSAAPSVAQALLALALDYMALAAKHGQPAGAQHQHMRQDPAGYGD
Ga0307468_1008060322	3300031740	Hardwood Forest Soil	MPTPEDYKQMADRCAQLAIACSAPSIAQTLLALGLDYMALAARPGQPVEVQQDPAGFGD
Ga0307470_102728592	3300032174	Hardwood Forest Soil	EDYKQMANRSAQLAIACSAPSVAQALFALGLEYMALAARLGQAAEMQQDPAGFGD
Ga0307472_1002390604	3300032205	Hardwood Forest Soil	MATTEDYRQMANRSAQLAIGCAAPSVAQALLALALDYMALAAKHGQPAAAQHLHMRQDPGGFGD
Ga0370546_074367_294_473	3300034681	Soil	MPTSEDYRQMANRSAQLAIGCSAPSVAQALLALGLEYMALAARLGQAAEMQQDPAGFGD

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F064143

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences