NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F064048

Metagenome / Metatranscriptome Family F064048

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F064048
Family Type Metagenome / Metatranscriptome
Number of Sequences 129
Average Sequence Length 58 residues
Representative Sequence SISKLRADNYDLRASGKGVFSVWEKNVTLRSGETKNLTLRLIYAKEIPKAYVKSKPKQ
Number of Associated Samples 96
Number of Associated Scaffolds 129

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 0.78 %
% of genes near scaffold ends (potentially truncated) 98.45 %
% of genes from short scaffolds (< 2000 bps) 93.02 %
Associated GOLD sequencing projects 88
AlphaFold2 3D model prediction Yes
3D model pTM-score0.27

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Bacteria (98.450 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil
(48.062 % of family members)
Environment Ontology (ENVO) Unclassified
(44.961 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(49.612 % of family members)


 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      

 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 3.49%    β-sheet: 12.79%    Coil/Unstructured: 83.72%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.27
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 129 Family Scaffolds
PF13490zf-HC2 18.60
PF08281Sigma70_r4_2 11.63
PF01243Putative_PNPOx 5.43
PF13620CarboxypepD_reg 1.55
PF13473Cupredoxin_1 1.55
PF08238Sel1 0.78
PF12704MacB_PCD 0.78
PF09990DUF2231 0.78
PF04993TfoX_N 0.78
PF00149Metallophos 0.78
PF13401AAA_22 0.78
PF00069Pkinase 0.78

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 129 Family Scaffolds
COG0515Serine/threonine protein kinaseSignal transduction mechanisms [T] 3.10
COG3070Transcriptional regulator of competence genes, TfoX/Sxy familyTranscription [K] 0.78

 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms98.45 %
UnclassifiedrootN/A1.55 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300002557|JGI25381J37097_1012090All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales → Ktedonobacteraceae → Ktedonobacter → Ktedonobacter racemifer1521Open in IMG/M
3300002911|JGI25390J43892_10177566All Organisms → cellular organisms → Bacteria → Acidobacteria500Open in IMG/M
3300004099|Ga0058900_1337722All Organisms → cellular organisms → Bacteria → Acidobacteria593Open in IMG/M
3300005450|Ga0066682_10400944All Organisms → cellular organisms → Bacteria → Acidobacteria879Open in IMG/M
3300005467|Ga0070706_101923809All Organisms → cellular organisms → Bacteria536Open in IMG/M
3300005540|Ga0066697_10126823All Organisms → cellular organisms → Bacteria1499Open in IMG/M
3300005555|Ga0066692_10600365All Organisms → cellular organisms → Bacteria → Acidobacteria691Open in IMG/M
3300006102|Ga0075015_100707489All Organisms → cellular organisms → Bacteria → Acidobacteria598Open in IMG/M
3300006162|Ga0075030_100759694All Organisms → cellular organisms → Bacteria766Open in IMG/M
3300006172|Ga0075018_10363426All Organisms → cellular organisms → Bacteria → Acidobacteria728Open in IMG/M
3300006755|Ga0079222_10192393All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Rhodanobacteraceae → Dyella → Dyella japonica1217Open in IMG/M
3300006800|Ga0066660_10424435All Organisms → cellular organisms → Bacteria → Proteobacteria1105Open in IMG/M
3300006800|Ga0066660_10604593All Organisms → cellular organisms → Bacteria916Open in IMG/M
3300006954|Ga0079219_10063630All Organisms → cellular organisms → Bacteria → Acidobacteria1653Open in IMG/M
3300007255|Ga0099791_10262310All Organisms → cellular organisms → Bacteria821Open in IMG/M
3300007265|Ga0099794_10055594All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1913Open in IMG/M
3300007265|Ga0099794_10196967All Organisms → cellular organisms → Bacteria → Acidobacteria1031Open in IMG/M
3300007265|Ga0099794_10339448All Organisms → cellular organisms → Bacteria → Acidobacteria780Open in IMG/M
3300007788|Ga0099795_10161663All Organisms → cellular organisms → Bacteria924Open in IMG/M
3300009088|Ga0099830_10277607All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Rhodanobacteraceae → Dyella → Dyella japonica1332Open in IMG/M
3300009088|Ga0099830_11467003All Organisms → cellular organisms → Bacteria → Acidobacteria568Open in IMG/M
3300009089|Ga0099828_11595345All Organisms → cellular organisms → Bacteria → Acidobacteria575Open in IMG/M
3300009143|Ga0099792_10258822All Organisms → cellular organisms → Bacteria1016Open in IMG/M
3300009143|Ga0099792_10431329All Organisms → cellular organisms → Bacteria813Open in IMG/M
3300010046|Ga0126384_10528220All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1022Open in IMG/M
3300010048|Ga0126373_10104767All Organisms → cellular organisms → Bacteria2622Open in IMG/M
3300010048|Ga0126373_11912934All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Sinobacteraceae → Nevskia → Nevskia soli656Open in IMG/M
3300010320|Ga0134109_10036834All Organisms → cellular organisms → Bacteria1579Open in IMG/M
3300010325|Ga0134064_10112084All Organisms → cellular organisms → Bacteria → Acidobacteria909Open in IMG/M
3300010358|Ga0126370_10334803All Organisms → cellular organisms → Bacteria1216Open in IMG/M
3300010358|Ga0126370_10874826Not Available809Open in IMG/M
3300010364|Ga0134066_10371379All Organisms → cellular organisms → Bacteria → Acidobacteria537Open in IMG/M
3300010376|Ga0126381_100005631All Organisms → cellular organisms → Bacteria13819Open in IMG/M
3300011120|Ga0150983_10074082All Organisms → cellular organisms → Bacteria → Acidobacteria513Open in IMG/M
3300011120|Ga0150983_10192890All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium962Open in IMG/M
3300011120|Ga0150983_10408007All Organisms → cellular organisms → Bacteria → Acidobacteria1047Open in IMG/M
3300011120|Ga0150983_11467929All Organisms → cellular organisms → Bacteria600Open in IMG/M
3300011120|Ga0150983_12824732All Organisms → cellular organisms → Bacteria → Acidobacteria1012Open in IMG/M
3300011120|Ga0150983_14377003All Organisms → cellular organisms → Bacteria → Acidobacteria797Open in IMG/M
3300011271|Ga0137393_10654194All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium901Open in IMG/M
3300011271|Ga0137393_10831650All Organisms → cellular organisms → Bacteria → Acidobacteria789Open in IMG/M
3300012096|Ga0137389_10488247All Organisms → cellular organisms → Bacteria → Acidobacteria1056Open in IMG/M
3300012096|Ga0137389_10963857All Organisms → cellular organisms → Bacteria → Acidobacteria731Open in IMG/M
3300012189|Ga0137388_10751855All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium905Open in IMG/M
3300012189|Ga0137388_11133202All Organisms → cellular organisms → Bacteria → Acidobacteria719Open in IMG/M
3300012199|Ga0137383_11130853All Organisms → cellular organisms → Bacteria → Acidobacteria566Open in IMG/M
3300012200|Ga0137382_11012570All Organisms → cellular organisms → Bacteria → Acidobacteria596Open in IMG/M
3300012202|Ga0137363_10447113All Organisms → cellular organisms → Bacteria → Acidobacteria1081Open in IMG/M
3300012202|Ga0137363_10466268All Organisms → cellular organisms → Bacteria → Acidobacteria1058Open in IMG/M
3300012203|Ga0137399_10588772All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium935Open in IMG/M
3300012203|Ga0137399_10982185All Organisms → cellular organisms → Bacteria → Acidobacteria711Open in IMG/M
3300012205|Ga0137362_10236852All Organisms → cellular organisms → Bacteria1575Open in IMG/M
3300012205|Ga0137362_10272568All Organisms → cellular organisms → Bacteria1463Open in IMG/M
3300012205|Ga0137362_11435242All Organisms → cellular organisms → Bacteria → Acidobacteria576Open in IMG/M
3300012210|Ga0137378_10227815All Organisms → cellular organisms → Bacteria1735Open in IMG/M
3300012211|Ga0137377_10287057All Organisms → cellular organisms → Bacteria1579Open in IMG/M
3300012349|Ga0137387_10150984All Organisms → cellular organisms → Bacteria1654Open in IMG/M
3300012361|Ga0137360_11570114All Organisms → cellular organisms → Bacteria → Acidobacteria563Open in IMG/M
3300012362|Ga0137361_10344288All Organisms → cellular organisms → Bacteria1368Open in IMG/M
3300012362|Ga0137361_11522062All Organisms → cellular organisms → Bacteria → Acidobacteria591Open in IMG/M
3300012683|Ga0137398_10259962All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Isosphaerales → Isosphaeraceae → Singulisphaera → unclassified Singulisphaera → Singulisphaera sp.1158Open in IMG/M
3300012685|Ga0137397_10336123All Organisms → cellular organisms → Bacteria → Acidobacteria1125Open in IMG/M
3300012922|Ga0137394_10002619All Organisms → cellular organisms → Bacteria13332Open in IMG/M
3300012922|Ga0137394_10552163All Organisms → cellular organisms → Bacteria → Acidobacteria976Open in IMG/M
3300012922|Ga0137394_11526624All Organisms → cellular organisms → Bacteria → Acidobacteria526Open in IMG/M
3300012923|Ga0137359_10599070All Organisms → cellular organisms → Bacteria → Acidobacteria967Open in IMG/M
3300012925|Ga0137419_10505880All Organisms → cellular organisms → Bacteria960Open in IMG/M
3300012925|Ga0137419_10963860All Organisms → cellular organisms → Bacteria → Acidobacteria705Open in IMG/M
3300012925|Ga0137419_11668029All Organisms → cellular organisms → Bacteria → Acidobacteria543Open in IMG/M
3300012929|Ga0137404_10334047All Organisms → cellular organisms → Bacteria1322Open in IMG/M
3300012929|Ga0137404_10670314All Organisms → cellular organisms → Bacteria → Acidobacteria936Open in IMG/M
3300012929|Ga0137404_10693792All Organisms → cellular organisms → Bacteria → Acidobacteria920Open in IMG/M
3300012929|Ga0137404_10744578All Organisms → cellular organisms → Bacteria → Acidobacteria888Open in IMG/M
3300012930|Ga0137407_11793767All Organisms → cellular organisms → Bacteria → Acidobacteria585Open in IMG/M
3300012944|Ga0137410_11291598All Organisms → cellular organisms → Bacteria → Acidobacteria631Open in IMG/M
3300014166|Ga0134079_10011007All Organisms → cellular organisms → Bacteria → Acidobacteria2750Open in IMG/M
3300015054|Ga0137420_1100281All Organisms → cellular organisms → Bacteria → Acidobacteria1075Open in IMG/M
3300015054|Ga0137420_1102807All Organisms → cellular organisms → Bacteria1601Open in IMG/M
3300015241|Ga0137418_10004519All Organisms → cellular organisms → Bacteria12771Open in IMG/M
3300015241|Ga0137418_10803919All Organisms → cellular organisms → Bacteria → Acidobacteria704Open in IMG/M
3300015245|Ga0137409_10073064All Organisms → cellular organisms → Bacteria3212Open in IMG/M
3300015245|Ga0137409_11481144All Organisms → cellular organisms → Bacteria → Acidobacteria526Open in IMG/M
3300015264|Ga0137403_10620304All Organisms → cellular organisms → Bacteria → Acidobacteria945Open in IMG/M
3300015356|Ga0134073_10095737All Organisms → cellular organisms → Bacteria → Acidobacteria870Open in IMG/M
3300016445|Ga0182038_10473271All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1064Open in IMG/M
3300017930|Ga0187825_10120826All Organisms → cellular organisms → Bacteria → Acidobacteria914Open in IMG/M
3300017955|Ga0187817_10804747All Organisms → cellular organisms → Bacteria → Acidobacteria600Open in IMG/M
3300017994|Ga0187822_10208131Not Available655Open in IMG/M
3300017995|Ga0187816_10127070All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1099Open in IMG/M
3300018086|Ga0187769_10795247All Organisms → cellular organisms → Bacteria → Acidobacteria715Open in IMG/M
3300018089|Ga0187774_11392031All Organisms → cellular organisms → Bacteria → Acidobacteria513Open in IMG/M
3300018468|Ga0066662_13027260All Organisms → cellular organisms → Bacteria → Acidobacteria500Open in IMG/M
3300020170|Ga0179594_10153618All Organisms → cellular organisms → Bacteria → Acidobacteria852Open in IMG/M
3300020199|Ga0179592_10417506All Organisms → cellular organisms → Bacteria583Open in IMG/M
3300020581|Ga0210399_11097546All Organisms → cellular organisms → Bacteria → Acidobacteria637Open in IMG/M
3300021088|Ga0210404_10188341All Organisms → cellular organisms → Bacteria → Acidobacteria1101Open in IMG/M
3300021088|Ga0210404_10712652All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium572Open in IMG/M
3300021171|Ga0210405_10096587All Organisms → cellular organisms → Bacteria2331Open in IMG/M
3300021407|Ga0210383_11314343All Organisms → cellular organisms → Bacteria → Acidobacteria604Open in IMG/M
3300021432|Ga0210384_10013387All Organisms → cellular organisms → Bacteria8177Open in IMG/M
3300021479|Ga0210410_10820533All Organisms → cellular organisms → Bacteria → Acidobacteria815Open in IMG/M
3300022531|Ga0242660_1032585All Organisms → cellular organisms → Bacteria1058Open in IMG/M
3300025910|Ga0207684_11158318All Organisms → cellular organisms → Bacteria642Open in IMG/M
3300026296|Ga0209235_1087432All Organisms → cellular organisms → Bacteria1375Open in IMG/M
3300026301|Ga0209238_1049629All Organisms → cellular organisms → Bacteria1511Open in IMG/M
3300026304|Ga0209240_1056970All Organisms → cellular organisms → Bacteria1465Open in IMG/M
3300026356|Ga0257150_1072375All Organisms → cellular organisms → Bacteria → Acidobacteria522Open in IMG/M
3300026482|Ga0257172_1090299All Organisms → cellular organisms → Bacteria → Acidobacteria563Open in IMG/M
3300026496|Ga0257157_1005869All Organisms → cellular organisms → Bacteria1885Open in IMG/M
3300026499|Ga0257181_1035134All Organisms → cellular organisms → Bacteria → Acidobacteria799Open in IMG/M
3300026550|Ga0209474_10360839All Organisms → cellular organisms → Bacteria → Acidobacteria802Open in IMG/M
3300026557|Ga0179587_10131067All Organisms → cellular organisms → Bacteria1548Open in IMG/M
3300027591|Ga0209733_1177917All Organisms → cellular organisms → Bacteria → Acidobacteria505Open in IMG/M
3300027669|Ga0208981_1061809All Organisms → cellular organisms → Bacteria → Acidobacteria953Open in IMG/M
3300027674|Ga0209118_1064258All Organisms → cellular organisms → Bacteria → Acidobacteria1066Open in IMG/M
3300027867|Ga0209167_10534607All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Sinobacteraceae → Nevskia → Nevskia soli642Open in IMG/M
3300027869|Ga0209579_10408012All Organisms → cellular organisms → Bacteria → Acidobacteria736Open in IMG/M
3300027875|Ga0209283_10450249All Organisms → cellular organisms → Bacteria834Open in IMG/M
3300027882|Ga0209590_10588336All Organisms → cellular organisms → Bacteria → Acidobacteria716Open in IMG/M
3300027903|Ga0209488_10920487All Organisms → cellular organisms → Bacteria611Open in IMG/M
3300027903|Ga0209488_10960262All Organisms → cellular organisms → Bacteria → Acidobacteria595Open in IMG/M
3300027903|Ga0209488_11116413All Organisms → cellular organisms → Bacteria → Acidobacteria537Open in IMG/M
3300028536|Ga0137415_10680647All Organisms → cellular organisms → Bacteria → Acidobacteria841Open in IMG/M
3300031747|Ga0318502_10095553All Organisms → cellular organisms → Bacteria1641Open in IMG/M
3300031823|Ga0307478_10870954All Organisms → cellular organisms → Bacteria → Acidobacteria754Open in IMG/M
3300031962|Ga0307479_10913878All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium849Open in IMG/M
3300032068|Ga0318553_10635000All Organisms → cellular organisms → Bacteria → Acidobacteria559Open in IMG/M
3300032180|Ga0307471_102460181All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Sinobacteraceae → Nevskia → Nevskia soli658Open in IMG/M
3300033158|Ga0335077_10134734All Organisms → cellular organisms → Bacteria2854Open in IMG/M


 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil48.06%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil10.85%
Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil7.75%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil4.65%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil4.65%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil4.65%
Freshwater SedimentEnvironmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment3.10%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil3.88%
WatershedsEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds2.33%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil2.33%
Surface SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil1.55%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil1.55%
Tropical PeatlandEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland1.55%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere1.55%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil0.78%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Soil0.78%

Visualization
Powered by ApexCharts



Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300002557Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_20cmEnvironmentalOpen in IMG/M
3300002911Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_2_20cmEnvironmentalOpen in IMG/M
3300004099Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF236 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300005450Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131EnvironmentalOpen in IMG/M
3300005467Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaGEnvironmentalOpen in IMG/M
3300005540Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_146EnvironmentalOpen in IMG/M
3300005555Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141EnvironmentalOpen in IMG/M
3300006102Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2013EnvironmentalOpen in IMG/M
3300006162Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012EnvironmentalOpen in IMG/M
3300006172Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2014EnvironmentalOpen in IMG/M
3300006755Agricultural soil microbial communities from Georgia to study Nitrogen management - GA PlitterEnvironmentalOpen in IMG/M
3300006800Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109EnvironmentalOpen in IMG/M
3300006954Agricultural soil microbial communities from Georgia to study Nitrogen management - GA ControlEnvironmentalOpen in IMG/M
3300007255Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1EnvironmentalOpen in IMG/M
3300007265Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1EnvironmentalOpen in IMG/M
3300007788Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2EnvironmentalOpen in IMG/M
3300009088Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaGEnvironmentalOpen in IMG/M
3300009089Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaGEnvironmentalOpen in IMG/M
3300009143Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2EnvironmentalOpen in IMG/M
3300010046Tropical forest soil microbial communities from Panama - MetaG Plot_36EnvironmentalOpen in IMG/M
3300010048Tropical forest soil microbial communities from Panama - MetaG Plot_11EnvironmentalOpen in IMG/M
3300010320Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_11112015EnvironmentalOpen in IMG/M
3300010325Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_2_0_1 metaGEnvironmentalOpen in IMG/M
3300010358Tropical forest soil microbial communities from Panama - MetaG Plot_3EnvironmentalOpen in IMG/M
3300010364Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09212015EnvironmentalOpen in IMG/M
3300010376Tropical forest soil microbial communities from Panama - MetaG Plot_28EnvironmentalOpen in IMG/M
3300011120Combined assembly of Microbial Forest Soil metaTEnvironmentalOpen in IMG/M
3300011271Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaGEnvironmentalOpen in IMG/M
3300012096Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaGEnvironmentalOpen in IMG/M
3300012189Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaGEnvironmentalOpen in IMG/M
3300012199Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaGEnvironmentalOpen in IMG/M
3300012200Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaGEnvironmentalOpen in IMG/M
3300012202Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaGEnvironmentalOpen in IMG/M
3300012203Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaGEnvironmentalOpen in IMG/M
3300012205Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaGEnvironmentalOpen in IMG/M
3300012210Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaGEnvironmentalOpen in IMG/M
3300012211Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaGEnvironmentalOpen in IMG/M
3300012349Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaGEnvironmentalOpen in IMG/M
3300012361Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaGEnvironmentalOpen in IMG/M
3300012362Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaGEnvironmentalOpen in IMG/M
3300012683Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaGEnvironmentalOpen in IMG/M
3300012685Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaGEnvironmentalOpen in IMG/M
3300012922Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaGEnvironmentalOpen in IMG/M
3300012923Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaGEnvironmentalOpen in IMG/M
3300012925Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012929Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012930Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012944Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300014166Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09182015EnvironmentalOpen in IMG/M
3300015054Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (PacBio error correction)EnvironmentalOpen in IMG/M
3300015241Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300015245Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300015264Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300015356Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_5_24_1 metaGEnvironmentalOpen in IMG/M
3300016445Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108EnvironmentalOpen in IMG/M
3300017930Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_5EnvironmentalOpen in IMG/M
3300017955Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_2EnvironmentalOpen in IMG/M
3300017994Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_2EnvironmentalOpen in IMG/M
3300017995Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_1EnvironmentalOpen in IMG/M
3300018086Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_10_MGEnvironmentalOpen in IMG/M
3300018089Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP05_20_MGEnvironmentalOpen in IMG/M
3300018468Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111EnvironmentalOpen in IMG/M
3300020170Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad1_1_08_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300020199Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300020581Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-MEnvironmentalOpen in IMG/M
3300021088Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-MEnvironmentalOpen in IMG/M
3300021171Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-MEnvironmentalOpen in IMG/M
3300021407Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-OEnvironmentalOpen in IMG/M
3300021432Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-MEnvironmentalOpen in IMG/M
3300021479Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-MEnvironmentalOpen in IMG/M
3300022531Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-28-M (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300025910Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300026296Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_20cm (SPAdes)EnvironmentalOpen in IMG/M
3300026301Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_20cm (SPAdes)EnvironmentalOpen in IMG/M
3300026304Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_80cm (SPAdes)EnvironmentalOpen in IMG/M
3300026356Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DL-13-AEnvironmentalOpen in IMG/M
3300026482Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DW-16-BEnvironmentalOpen in IMG/M
3300026496Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NI-69-AEnvironmentalOpen in IMG/M
3300026499Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NR-06-BEnvironmentalOpen in IMG/M
3300026550Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145 (SPAdes)EnvironmentalOpen in IMG/M
3300026557Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungalEnvironmentalOpen in IMG/M
3300027591Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M1 (SPAdes)EnvironmentalOpen in IMG/M
3300027669Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM1_M1 (SPAdes)EnvironmentalOpen in IMG/M
3300027674Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_M1 (SPAdes)EnvironmentalOpen in IMG/M
3300027867Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1 (SPAdes)EnvironmentalOpen in IMG/M
3300027869Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1 (SPAdes)EnvironmentalOpen in IMG/M
3300027875Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300027882Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300027903Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)EnvironmentalOpen in IMG/M
3300028536Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300031747Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f22EnvironmentalOpen in IMG/M
3300031823Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05EnvironmentalOpen in IMG/M
3300031962Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515EnvironmentalOpen in IMG/M
3300032068Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f21EnvironmentalOpen in IMG/M
3300032180Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515EnvironmentalOpen in IMG/M
3300033158Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.1EnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap


 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
JGI25381J37097_101209033300002557Grasslands SoilGHFSISKLGADNYDVRASGKGVFSVWEKNVTLRSGQTKDLTLRLIYAKEIPKAYVKRKQKQ*
JGI25390J43892_1017756623300002911Grasslands SoilADNYDLRASGKGVFSVWEKNVRLRSGETKDLTLRLIYAKEIPKAYVKRKQNQ*
Ga0058900_133772213300004099Forest SoilKSDNYDLRATGKGVFSECEKNISVKSGQTKSVTLRLIYAKQIPKAYVKTKPQQ*
Ga0066682_1040094423300005450SoilGHFSISKLGADNYDVRASGKGVFSVWEKNVMLRSGETKDLTLRLIYAKEIPKAYVKRKQKQ*
Ga0070706_10192380923300005467Corn, Switchgrass And Miscanthus RhizosphereQGRFTITKLRSDNYDLRASGKGVFSEWEKNVTVRSGRTKAVTLHLIYAKEIPKEYTKSKAKQ*
Ga0066697_1012682333300005540SoilTISRLRADNYDLRAYGKGVFSEREKNVSLRSGHTKSLTLRLIYAKEVPKEYVKSKPAQ*
Ga0066692_1060036513300005555SoilFTIRKLRADNYDIRASGKGVFSEWEKNVSLRTGQTKELTLRLIYARKIPKAYVKSKPQQ*
Ga0075015_10070748913300006102WatershedsNDIYDLRASGKGVFSEWEKNVTVRPGHTKSITLRLIYAKEIPEAYTKSKPKE*
Ga0075030_10075969413300006162WatershedsADNYDLRASGKGVFSEWQKNITLRSGATKELTLHLIYAKQIPKAYVKNNSKP*
Ga0075018_1036342613300006172WatershedsRFTISKLQADNYDLRASGKGVFSEWEKNVNLRPKETKNLTLRLIYAKKIPKAYVKSRPKQ
Ga0079222_1019239313300006755Agricultural SoilLRADSYDVRASGKGVYSDWEKNIPLRARQTKTVTLRLIYAKEIPKEYVKSKPKQ*
Ga0066660_1042443533300006800SoilDNYDVRASGKGVFSTWEKNVTLRSGENKNLTLRLVYAKEIPKAYVKNKPKQ*
Ga0066660_1060459333300006800SoilRADNYDMRASGRGVFSEWEKNIYVRKGKTKNVTLRLIYAKEIPKAYVRGKPNPQ*
Ga0079219_1006363013300006954Agricultural SoilGHFTIANLRADNYDMRASGKGVFSEWEKNITVRKGHTKNVTLRLIYAKEIPKAYVKGKPNPQ*
Ga0099791_1026231033300007255Vadose Zone SoilRLRSDNYDLRASGKGVFSEWEKNVTVRSGRTKTVTLHLIYAKEIPKEYTKSNAKQ*
Ga0099794_1005559433300007265Vadose Zone SoilRSDNYDLRASGRGVYSEWEKNVTVRSGQTKSVTLRLIYAKQIPKAYTKSKAKE*
Ga0099794_1019696723300007265Vadose Zone SoilHGYFSIGKLRADIYDLRASGKGVFSPWEKNIALRTGETKNLTLHLVYAKEIPKAYVKRKPKQ*
Ga0099794_1033944823300007265Vadose Zone SoilLKADNYDLRASGKGVFSEWEKNVNLRSGARKEVTLHLIYAKEIPKAYVKTKPKQ*
Ga0099795_1016166333300007788Vadose Zone SoilDSQGRFAITKLRSDNYDLRASGKGVFSEWEKNVTVHSGRTKSVTLRLIYAKEIPKEYTKSKAKQ*
Ga0099830_1027760713300009088Vadose Zone SoilDSHGYFSIGKLRADIYDLRASGKGVFSPWEKNIALRSGERKNLTLHLVYAKEIPKAYVKRKPKQ*
Ga0099830_1146700313300009088Vadose Zone SoilHGHFTISKLKADNYDLRASGKGVFSTWEKNVMLRNGETKNLTLQLIYAKDIPKAYVKSKPKQ*
Ga0099828_1159534523300009089Vadose Zone SoilDSHGRFSIAKLGADNYDLRASGKGVFSEWEKNITLRTGQTIDLTLHLVYARQIPKAYVKSNSKQ*
Ga0099792_1025882233300009143Vadose Zone SoilLRSDNYDLRASGKGVFSEWEKNVTVRSGRTKSVTLHLIYAREIPKEYAKSKAKQ*
Ga0099792_1043132913300009143Vadose Zone SoilQGRFTIRKLRSDNYDLRASGKGVFSEWEKNVTVRSGRTKSVTLHLIYAREIPKEYAKSKAKQ*
Ga0126384_1052822023300010046Tropical Forest SoilTIANLRADNYDMRASGKGVFSEWEKNVTVHRGQTKSVTLRLVYAKEVPKAYVKGKPNPQ*
Ga0126373_1010476713300010048Tropical Forest SoilKLRADNYDMRASGKGVFSEWQKNITVHSGQTKNVTLRLIYAKDVPKAYVKTKPNPQ*
Ga0126373_1191293413300010048Tropical Forest SoilKLRSDSYEVRATGKGVFSEWVKNVFVRSGQTKSVTLRLDYAKGVPKAYTATRTYDPQPH*
Ga0134109_1003683413300010320Grasslands SoilHFTITKLRSDNYDMRASGKGVFSEWQKNITVHSGQTKNVTLRLIYAKEVPKAYVKTKPNPQ*
Ga0134064_1011208423300010325Grasslands SoilSHGHFSISKLGADNYDVRASGKGVFSVWEKNVMLRSGETKDLTLRLIYAKEIPKAYVKRKQKQ*
Ga0126370_1033480313300010358Tropical Forest SoilKLRADNYDMRASGKGVFSEWEKNVTVRPGQTKEVTFRLIYAKEIPKAYVKSKPVQPQQ*
Ga0126370_1087482613300010358Tropical Forest SoilADNYDMRASGKGVFSEWEKNVTVRPGQTKEVTFRLIYAKEIPKAYVKSKPAQPQQ*
Ga0134066_1037137923300010364Grasslands SoilRFTISRLRADSYDVRASGKGVSSDWEKNIPLKAGQTKSVTLRLIYAKEIPKAYVKSKPKQ
Ga0126381_100005631173300010376Tropical Forest SoilGRFTITKLRADNYDMRASGKGVFSEWQKNITVRSGGTKNVTLRLIYARQVPKDYVKTKPNPQ*
Ga0150983_1007408223300011120Forest SoilDNYDLRASGKGVFSEWQKNISLRSGATKQLTLRLIYAKEIPKAYVKSSPKQ*
Ga0150983_1019289033300011120Forest SoilYDLRASGKGVFSEWEKNVSVRSGHTKSITLRLIYAKEIPKAYTKSTPKD*
Ga0150983_1040800733300011120Forest SoilTITKLKSDNYDLRATGKGVFSEWEKNISVKSGQTKSVTLRLIYAKQIPKAYVKTKPQQ*
Ga0150983_1146792913300011120Forest SoilDNYDLRASGKGVFSEWEKNVTVRSGRTKSVTLHLIYAKEIPKDYAKSKANQ*
Ga0150983_1282473213300011120Forest SoilMDTPSVSTAPSFVRASGKGVFSEWEKNVSLRSGQTKTVTLRLIYAKEIPKAYVKSKPQQ*
Ga0150983_1437700323300011120Forest SoilKADDYDLRASGKGVFSEWEKNIPLRSGETKNLTLHLIYAKEIPKAYVKRNPKQ*
Ga0137393_1065419423300011271Vadose Zone SoilSDNYDLRASGRGVFSEWEKNVTVRSGQTKSVTLRLIYAKEIPKAYTKSKAKE*
Ga0137393_1083165013300011271Vadose Zone SoilTDNYDLRASGKGVYSEWEKNVTVRSGQTKTVTLRLIYARQIPKAYTKSKAKP*
Ga0137389_1048824723300012096Vadose Zone SoilADNYDLRASGKGVFSEWEKNITLRSGAKNELTLRLIYAKQIPKAYVKSNSKQ*
Ga0137389_1096385723300012096Vadose Zone SoilKLRADIYDLRASGKGVFSPWEKNIALRSGERKNLTLHLVYAKEIPKAYVNRKPKH*
Ga0137388_1075185523300012189Vadose Zone SoilYDLRASGKGVFSEWEKNVNLRSGARKEVTLHLIYAKEIPKAYVKTKPKQ*
Ga0137388_1113320223300012189Vadose Zone SoilDSHGRFSIAKLGADNYDLRASGKGVFSEWEKNITLRTGQTIELTLHLVYARQIPKTYVKSNSKQ*
Ga0137383_1113085323300012199Vadose Zone SoilKADDYDLRASGKGVFSEWEKNIPLRSGETKNLTLRLIYAKEVPKAYVKSKPKQ*
Ga0137382_1101257023300012200Vadose Zone SoilDNYDLRASGKGVFSTWEKNVTLRSGENKNLTLRLVYAKEIPKAYVKNKPKQ*
Ga0137363_1044711313300012202Vadose Zone SoilQGHFTISKLKADNYDLRASGKGVFSEWEKNVNLRSGARKEVTLRLIYAKEIPKAYVKTKPKQ*
Ga0137363_1046626833300012202Vadose Zone SoilKLRSDNYDLRASGRGVFSEWEKNVTVRSGQTKSVTLRLIYAKEIPKAYTRSKAKE*
Ga0137399_1058877213300012203Vadose Zone SoilFTISKLKADNYDLRASGKGVFSEWEKNVNLRSGARKEVTLRLIYAKEIPKAYVKTKPKQ*
Ga0137399_1098218523300012203Vadose Zone SoilDIRASGKGVFSEWEKNVTLRTGQRKELTLRLIYARKIPKAYVKSKPRQ*
Ga0137362_1023685233300012205Vadose Zone SoilGHFTISKLKADNYDLRASGKGVFSEWEKNVNLRSGARKDVTLRLIYAKEIPKAYVKTKPKQ*
Ga0137362_1027256843300012205Vadose Zone SoilLRSDNYDLRASSKGVFSEWEKNVTVHSGRTKSVTLRLIYAKEIPKEYTKSKAKQ*
Ga0137362_1143524213300012205Vadose Zone SoilTISKLKADNYDLRASGKGVFSEWEKNVNLRSGARKEVTLRLIYAKEVPKAYVKTKPKQ*
Ga0137378_1022781533300012210Vadose Zone SoilDSSGHFTISKLKADDYDLRASGKGVFSEWEKNIPLRSGETKNLTLHLVYAKEIPKAYVKRNPKQ*
Ga0137377_1028705713300012211Vadose Zone SoilTKLRSDNYDMRASGKGVFSEWQKNITLHSGQTKNVTLRLIYAKEVPQAYVKTKPNPQ*
Ga0137387_1015098413300012349Vadose Zone SoilGRFAISGLRADSYDVRASGKGVYSDWEKNIPLRSRQTKTVTLRLIYAKEIPKEYVKSKPKQ*
Ga0137360_1157011413300012361Vadose Zone SoilDSRGIFTITKLGADNYDIRASGKGVFSEWEKNVTLRTGQRKELTLRLIYARKIPKAYVKSKPQQ*
Ga0137361_1034428813300012362Vadose Zone SoilKADNYDLRASGKGVFSEWEKNVNLRSGARKELTLRLIYAKEIPKAYVKTKPKQ*
Ga0137361_1152206213300012362Vadose Zone SoilGHFSISKLRADNYDLRASGKGVFSTWEKNVTLRSGENKNLTLRLVYAKEIPKAYVKSKPKQ*
Ga0137398_1025996233300012683Vadose Zone SoilGHFTISKLKADNYDLRASGKGVFSEWEKNVNLRSGARKEVTLRLIYAKEIPKAYVKTKPKQ*
Ga0137397_1033612333300012685Vadose Zone SoilFSISKLRADNYDLRASGKGVFSEWEKNVTLHSGQTKDLMLYLVYAKQIPKAYVKSNSKQ*
Ga0137394_10002619133300012922Vadose Zone SoilTKLRADNYDLRASGKGVFSEWEKNVTLHAGQTKDLTLYLVYAKQIPKAYVKSNSKQ*
Ga0137394_1055216313300012922Vadose Zone SoilGQFTITKLRADNYDIRASGKGVFSEWEKNVSLRTGQTKELTLRLIYARKIPKAYVKSKPQQ*
Ga0137394_1152662423300012922Vadose Zone SoilGQFTITKLRADNYDIRASGKGVFSEWEKNVTLRTGQRKELTLRLIYARKIPKAYVKSKPQQ*
Ga0137359_1059907023300012923Vadose Zone SoilRADNYDIRASGKGVFSEWEKNVTLRTGQRKELTLRLIYAKQIPKAYVKSKPQQ*
Ga0137419_1050588033300012925Vadose Zone SoilRFTITRLRSDNYDLRASGKGVFSEWEKNVTVRSGRTKTLTLHLIYAKEIPKEYTKGKAKQ
Ga0137419_1096386023300012925Vadose Zone SoilHGHFSISKLKPDNYDLRASGKGVFSEWQKNITLRSGATKELTVHLVYAKQIPKAYVKSTAKQ*
Ga0137419_1166802923300012925Vadose Zone SoilADNYDLRASGKGVFSTWEKNVTLRSGENKNLTLRLVYAREIPKAYVKSKPKQ*
Ga0137404_1033404713300012929Vadose Zone SoilITKLRADNYDLRASGKGVFSEWEKNVTLRAGQTKDLTLHLVYARQIPKAYVKSNSKQ*
Ga0137404_1067031423300012929Vadose Zone SoilFTISGLRADSYDVRASGKGVSSEWERNIPLRVRQTKSVTLRLIYAKEIPKEYVKSKPKQ*
Ga0137404_1069379223300012929Vadose Zone SoilRADNYDLRASGKGVFSEWVKNVNLRSGATKELTLQLIYAKQIPKAYTKSSARQ*
Ga0137404_1074457813300012929Vadose Zone SoilTITKLRADNYDIRASGRGVFSEWEKNVSLRTGQTKELTLRLIYARKIPKAYVKTKPQQ*
Ga0137407_1179376713300012930Vadose Zone SoilKLKADNYDLRASGKGVFSEWEKNVNLRSGARKEVTLRLIYAKEIPKAYVKTKPKQ*
Ga0137410_1129159813300012944Vadose Zone SoilITKLRADNYDLRASGKGVFSEWEKNVTLRAGQTKDLTLYLVYAKQIPKAYVKSNSKQ*
Ga0134079_1001100753300014166Grasslands SoilGHFSISKLGADNYDVRASGKGVFSVWEKNVTLRSGETKDLTLRLIYAREIPKAYVKRKQKQ*
Ga0137420_110028113300015054Vadose Zone SoilHIVRTDAHGHFTISKISKLRADNYDLRASGKGVFSEWVKNVNLRSGATKELTLQLIYAKQIPKAYTKSSAKQ*
Ga0137420_110280713300015054Vadose Zone SoilYDLRADLRASGKGVFSEWEKNVTVRSGRTKSVTLHLIYAREIPKEYAKSKAKQ*
Ga0137418_10004519143300015241Vadose Zone SoilLRSDNYDLRASGKGVFSEWEKNVTVRSGRTKTLTLHLIYAKEIPKEYTKGKAKQ*
Ga0137418_1080391923300015241Vadose Zone SoilVVRADSQGHFTISKLKADNYDLRASGKGVFSEWEKNVNLRSGARKELTLRLIYAKEIPKAYVKTKPKQ*
Ga0137409_1007306413300015245Vadose Zone SoilDLRASGKGVFSEWEKNVTVRSGRTKSVTLHLIYAREIPKEYAKSKAKQ*
Ga0137409_1148114413300015245Vadose Zone SoilFTITKLRADNYDIRASGKGVFSEWEKNVSVRTGQTKELTLRLIYARKIPKAYVKSKPQQ*
Ga0137403_1062030413300015264Vadose Zone SoilSRGQFTIRKLRADNYDIRASGKGVFSEWEKNVSLRTGQTKELTLRLIYARKIPKAYVKTKPQQ*
Ga0134073_1009573713300015356Grasslands SoilFTIANLRADNYDMRASGRGVFSEWEKNIYVRKGKTKNVTLRLIYAKEIPKAYVKGKPNPQ
Ga0182038_1047327113300016445SoilKLRADNYDMRASGKGVFSEWQKNITVRSGRTKNVTLRLIYAKEVPKAYVKSKPNPQ
Ga0187825_1012082623300017930Freshwater SedimentFTITKLRADNYDMRASSKGVFSEWQKNVALGRGQTKDVTLQLIYAKEMPKSPKDSKAKQ
Ga0187817_1080474723300017955Freshwater SedimentHFTISKLKADNYDLRASGKGVFSEWQKNITLRAGATKELTLHLIYAKQIPKAYTKSSPQQ
Ga0187822_1020813113300017994Freshwater SedimentMRASSKGVFSEWQKNVALGRGQTKDVTLQLIYAKEMPKSPKDSKAKQ
Ga0187816_1012707013300017995Freshwater SedimentHADAHGRFIIAKLKADNYDVRASGRGVFSEWEKNVNVRPGQEKTLTLRLIYAKQIPKAYVNSKPAQQ
Ga0187769_1079524723300018086Tropical PeatlandYDVRASGKGVFSEWEKNVTVKPGQEKTLTLHLIYAKQIPKAYVNSKPAQQ
Ga0187774_1139203123300018089Tropical PeatlandTKLSADAYDLRASGRGVFSEWQKNINLHSGQTKNVTLQLIYAKKIPKAYVKSAPKQQPQ
Ga0066662_1302726023300018468Grasslands SoilSISGLRADSYDVRASGKGVSSDWEKNIPLRARQTKTVTLRLIYAKEIPKAYVKSKPKQ
Ga0179594_1015361823300020170Vadose Zone SoilFSITKLRADNYDLRASGKGVFSEWEKNIMLRAGQTRDLTLHLVYAKEIPKAYVKSNSKQ
Ga0179592_1041750623300020199Vadose Zone SoilIRKLRSDNYDLRASGKGVFSEWEKNVTVRSGRTKSVTLHLIYAREIPKEYAKSKAKQ
Ga0210399_1109754613300020581SoilTITKLKSDNYDLRATGKGVFSEWEKNISVKSGQTKSVTLRLIYAKQIPKAYVKTKPQQ
Ga0210404_1018834123300021088SoilDSHGRFSISKLHADIYDVRASGRGVFSAWEKNIALRSGETKNLTLRLVYAKEIPKAYVKRSPKQ
Ga0210404_1071265223300021088SoilAKLRSDNYDLRASGRGVYSEWEKNVTVRSGQTKSVTLRLIYAKEIPKAYTKSKAKE
Ga0210405_1009658713300021171SoilLKADNYDIRASGKGVFSDWEKNVNIRPGQTKSLTLRLIYAKKIPKAYVNSKPAQQ
Ga0210383_1131434323300021407SoilNYDLRASGKGVFSEWQKNITLRSGARKELTLRLIYAKQIPKAYVKSNPKP
Ga0210384_1001338713300021432SoilIAKLRSDNYDLRASGRGVFSEWEKNVSVRSGQTKSVTLRLIYAKEIPKTYTKSKAKE
Ga0210410_1082053323300021479SoilSISKLRADNYDLRASGKGVFSVWEKNVTLRSGETKNLTLRLIYAKEIPKAYVKSKPKQ
Ga0242660_103258533300022531SoilYDLRASGKGVFSVWEKNISVKPGQTKSVTLHLIYAKKIPKAYVKTPAKQQ
Ga0207684_1115831823300025910Corn, Switchgrass And Miscanthus RhizosphereQGRFTITKLRSDNYDLRASGKGVFSEWEKNVTVRSGRTKAVTLHLIYAKEIPKEYTKSKAKQ
Ga0209235_108743213300026296Grasslands SoilADNYDMRASGKGVFSEWEKNITVHSGQTKSVTLRMIYAREIPKAYVKSKPQQ
Ga0209238_104962933300026301Grasslands SoilYDLRASGKGVFSTWEKNVTLRSGENKNLTLRLVYAKEIPKAYVKNKPKQ
Ga0209240_105697013300026304Grasslands SoilLKADNYDLRASGKGVFSEWEKNVNLRSGARKELTLRLIYAKQIPKAYVKSNSKQ
Ga0257150_107237523300026356SoilSISKLRTDNYDLRASGKGVFSTWEKNVTLRSGETKNLTLRLIYAKEIPKAYVKSKPKQ
Ga0257172_109029913300026482SoilQFSISKLRADNYDLRASGKGVFSTWEKNVTLRSGETKNLTLRLIYAKDIPKAYVKSKPKQ
Ga0257157_100586933300026496SoilDAHGQFSISKLRADNYDLRASGKGVFSTWEKNVTLRSGETKNLTLRLIYAKEIPKAYVKSKPKQ
Ga0257181_103513413300026499SoilYFSIGKLRADIYDLRASGKGVFSPWEKNIALRSGETKNLTLRLIYAKEIPKAYVKSKPKQ
Ga0209474_1036083913300026550SoilDSYDVRASGKGVSSDWEKNIPLRARQTKTVTLRLIYAKEIPKAYVKSKPKQ
Ga0179587_1013106713300026557Vadose Zone SoilIYDLRASGKGVFSEWEKNVAVRSGHTKSITLRLIYAKEIPKAYTKSKTKE
Ga0209733_117791713300027591Forest SoilVHTDAQGRFTITKLRSNDIYDLRASGEGVFSEWEKNVTVRSGHTKSITLRLIYAKEIPKAYTKSTAKQ
Ga0208981_106180923300027669Forest SoilTDSHGHFSISKLKADNYDLRASGKGVFSEWHKNITLRSGATKELTVHLVYAKQIPKAYVKSTAKQ
Ga0209118_106425823300027674Forest SoilMITKLRADNYDIRASGRGLFSEWEKNVTLRTGQRKELTLRLIYAKKIPKAYVKSKPQQ
Ga0209167_1053460713300027867Surface SoilKGRFTITKLRADNYDMRASSKGVFSEWQKNVALGRGQKKEITLQLIYAKEMPKASKTSKPKQ
Ga0209579_1040801213300027869Surface SoilFTITKLKSDNYEVRASAKGVFSEWEKNVTVRSGQTKSVTLRLEYAKEMPKAYGATPASSQKKQ
Ga0209283_1045024913300027875Vadose Zone SoilRTDNYDLRASGKGVFSEWEKNVTVRSGQTKSVTLRLIYAKEIPKAYTKSKAKD
Ga0209590_1058833613300027882Vadose Zone SoilLRADNYDLRAYGKGVFSEWEKNVSLRSGQTKSMTLRLIYAKEVPKEYVKSKPAQ
Ga0209488_1092048723300027903Vadose Zone SoilTIRKLRSDNYDLRASGKGVFSEWEKNVTVRSGRTKSVTLHLIYAREIPKEYAKSKAKQ
Ga0209488_1096026213300027903Vadose Zone SoilADSQGHFTISKLKADNYDLRASGKGVFSEWEKNVNLRSGARKEVTLRLIYAKEIPKAYVKTKPKQ
Ga0209488_1111641323300027903Vadose Zone SoilADNYDLRAYGKGVFSEWEKNVSLRSGQTKSMTLRLIYAKEVPKEYVKSKPAQ
Ga0137415_1068064723300028536Vadose Zone SoilARGRFTISGLRADSYDVRASGKGVYSDWEKNIPLRARQTKTVTLRLIYAKEIPKEYVKSKPKQ
Ga0318502_1009555313300031747SoilADNYDMRASGKGVFSEWQKNITVRSGQTKNVTLRLIYAKDVPTDYVKTKPNPQ
Ga0307478_1087095423300031823Hardwood Forest SoilGRFTITKLRSNDIYDLRASGKGVFSEWEKNVTVRSGQTKTVTLRLIYAKEIPKAYTKSKVKE
Ga0307479_1091387813300031962Hardwood Forest SoilNYDLRASGKGVYSEWEKNVTVRSGQTKSVTLRLIYAKEIPKAYTKSKAKE
Ga0318553_1063500013300032068SoilKLRADNYDMRASGKGVFSEWQKNITVRSGHTKNVTLRLIYAKDVPTDYVKTKPNPQ
Ga0307471_10246018123300032180Hardwood Forest SoilTDNYDLRASGKGVYSEWEKNVAVRSGQTKSVTLRLIYAKEIPKAYTKSKAKE
Ga0335077_1013473443300033158SoilHFTITKLKADAYDLRASGKGVFSEWQKNINLRKGQTKILTLRLIYAKEIPKAYVKSTPKQPQQ

 ⦗Top⦘


Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.