Metagenome / Metatranscriptome Family F064044

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F064044
Family Type	Metagenome / Metatranscriptome
Number of Sequences	129
Average Sequence Length	65 residues
Representative Sequence	RWFSARARGPVSLLALGKSDLDALSVNFPLLANKVLMRLAGIMAIRFRMLLDAQYLKESEEHQETDQ
Number of Associated Samples	108
Number of Associated Scaffolds	129

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	3.10 %
% of genes near scaffold ends (potentially truncated)	95.35 %
% of genes from short scaffolds (< 2000 bps)	97.67 %
Associated GOLD sequencing projects	104
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.51

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (100.000 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (15.504 % of family members)
Environment Ontology (ENVO)	Unclassified (31.783 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (34.884 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 50.53% β-sheet: 0.00% Coil/Unstructured: 49.47%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.51
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.51
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 129 Family Scaffolds
PF01594	AI-2E_transport	87.60
PF11026	DUF2721	0.78
PF00027	cNMP_binding	0.78
PF04213	HtaA	0.78
PF05598	DUF772	0.78
PF02922	CBM_48	0.78

COG ID	Name	Functional Category	% Frequency in 129 Family Scaffolds
COG0628	Predicted PurR-regulated permease PerM	General function prediction only [R]	87.60

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	91.47 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	5.43 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	91.47 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.78 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.78 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Candidatus Rokubacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	91.47 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.78 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.78 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
unclassified Candidatus Rokubacteria	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria	91.47 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.78 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.78 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	91.47 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.78 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.78 %
Unclassified	root	N/A	0.00 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2065487018\|GPINP_F5MS3JC02IY5AV	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	501	Open in IMG/M
2170459008\|GA8OVOZ01AX0SH	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	511	Open in IMG/M
3300000956\|JGI10216J12902_100055245	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	945	Open in IMG/M
3300004267\|Ga0066396_10017510	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	934	Open in IMG/M
3300004267\|Ga0066396_10018716	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	915	Open in IMG/M
3300005178\|Ga0066688_10252907	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1128	Open in IMG/M
3300005294\|Ga0065705_11151465	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	501	Open in IMG/M
3300005332\|Ga0066388_102867720	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	881	Open in IMG/M
3300005354\|Ga0070675_101897846	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	549	Open in IMG/M
3300005437\|Ga0070710_10985356	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	613	Open in IMG/M
3300005440\|Ga0070705_101167853	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	633	Open in IMG/M
3300005549\|Ga0070704_100591894	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	974	Open in IMG/M
3300005552\|Ga0066701_10522291	All Organisms → cellular organisms → Bacteria → Proteobacteria	733	Open in IMG/M
3300005559\|Ga0066700_10289006	All Organisms → cellular organisms → Bacteria → Proteobacteria	1153	Open in IMG/M
3300005576\|Ga0066708_10608368	All Organisms → cellular organisms → Bacteria → Proteobacteria	699	Open in IMG/M
3300005718\|Ga0068866_10600737	All Organisms → cellular organisms → Bacteria	743	Open in IMG/M
3300005764\|Ga0066903_102893033	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	931	Open in IMG/M
3300005764\|Ga0066903_104975908	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	705	Open in IMG/M
3300005764\|Ga0066903_108175495	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	536	Open in IMG/M
3300005843\|Ga0068860_102862688	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	500	Open in IMG/M
3300005844\|Ga0068862_101576144	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	663	Open in IMG/M
3300006172\|Ga0075018_10503998	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	631	Open in IMG/M
3300006358\|Ga0068871_101599731	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	617	Open in IMG/M
3300006577\|Ga0074050_11827988	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	686	Open in IMG/M
3300006797\|Ga0066659_11057069	All Organisms → cellular organisms → Bacteria → Proteobacteria	678	Open in IMG/M
3300006847\|Ga0075431_100904628	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	852	Open in IMG/M
3300006854\|Ga0075425_100831471	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1057	Open in IMG/M
3300006854\|Ga0075425_101843158	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	678	Open in IMG/M
3300006903\|Ga0075426_10886361	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	673	Open in IMG/M
3300006914\|Ga0075436_100886698	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	667	Open in IMG/M
3300009089\|Ga0099828_10259709	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1559	Open in IMG/M
3300009089\|Ga0099828_11586565	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	576	Open in IMG/M
3300009091\|Ga0102851_10242666	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1722	Open in IMG/M
3300009137\|Ga0066709_101462269	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	989	Open in IMG/M
3300009146\|Ga0105091_10132269	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1161	Open in IMG/M
3300009146\|Ga0105091_10788221	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	504	Open in IMG/M
3300009162\|Ga0075423_10427766	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1390	Open in IMG/M
3300009162\|Ga0075423_10783392	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1008	Open in IMG/M
3300009162\|Ga0075423_11654291	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	689	Open in IMG/M
3300009610\|Ga0105340_1224922	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	797	Open in IMG/M
3300010048\|Ga0126373_12440603	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	582	Open in IMG/M
3300010358\|Ga0126370_10104777	All Organisms → cellular organisms → Bacteria	1966	Open in IMG/M
3300010358\|Ga0126370_10473067	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1051	Open in IMG/M
3300010358\|Ga0126370_11100164	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	732	Open in IMG/M
3300010358\|Ga0126370_11683377	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	610	Open in IMG/M
3300010360\|Ga0126372_10007186	All Organisms → cellular organisms → Bacteria	5606	Open in IMG/M
3300010360\|Ga0126372_10638499	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1029	Open in IMG/M
3300010360\|Ga0126372_12077547	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	616	Open in IMG/M
3300010361\|Ga0126378_12467331	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	594	Open in IMG/M
3300010362\|Ga0126377_13422861	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	513	Open in IMG/M
3300010400\|Ga0134122_10450199	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1151	Open in IMG/M
3300010401\|Ga0134121_12132937	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	596	Open in IMG/M
3300011119\|Ga0105246_12346621	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	522	Open in IMG/M
3300011271\|Ga0137393_11701416	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	520	Open in IMG/M
3300011434\|Ga0137464_1032927	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1416	Open in IMG/M
3300011441\|Ga0137452_1247568	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	601	Open in IMG/M
3300012039\|Ga0137421_1081178	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	917	Open in IMG/M
3300012203\|Ga0137399_10312836	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1299	Open in IMG/M
3300012205\|Ga0137362_10525205	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1023	Open in IMG/M
3300012205\|Ga0137362_11479240	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	566	Open in IMG/M
3300012225\|Ga0137434_1012610	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1004	Open in IMG/M
3300012582\|Ga0137358_10408122	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	919	Open in IMG/M
3300012683\|Ga0137398_11046027	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	564	Open in IMG/M
3300012685\|Ga0137397_11335725	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	508	Open in IMG/M
3300012923\|Ga0137359_10946612	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	741	Open in IMG/M
3300012927\|Ga0137416_10065120	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	2620	Open in IMG/M
3300012929\|Ga0137404_11580149	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	608	Open in IMG/M
3300012931\|Ga0153915_13213353	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	531	Open in IMG/M
3300014262\|Ga0075301_1084372	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	666	Open in IMG/M
3300014268\|Ga0075309_1091583	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	732	Open in IMG/M
3300014864\|Ga0180068_1007909	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1495	Open in IMG/M
3300014867\|Ga0180076_1100861	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	532	Open in IMG/M
3300014880\|Ga0180082_1047820	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	909	Open in IMG/M
3300014881\|Ga0180094_1152405	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	541	Open in IMG/M
3300014883\|Ga0180086_1097051	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	746	Open in IMG/M
3300014884\|Ga0180104_1097543	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	834	Open in IMG/M
3300014884\|Ga0180104_1157086	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	673	Open in IMG/M
3300014885\|Ga0180063_1077197	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	992	Open in IMG/M
3300016404\|Ga0182037_11613361	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	577	Open in IMG/M
3300018468\|Ga0066662_10929952	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	856	Open in IMG/M
3300021168\|Ga0210406_10567964	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	889	Open in IMG/M
3300025551\|Ga0210131_1057103	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	640	Open in IMG/M
3300025910\|Ga0207684_10727177	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	842	Open in IMG/M
3300025916\|Ga0207663_11150604	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	624	Open in IMG/M
3300025922\|Ga0207646_10513408	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1079	Open in IMG/M
3300025922\|Ga0207646_10998903	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	739	Open in IMG/M
3300025928\|Ga0207700_10636511	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	950	Open in IMG/M
3300025930\|Ga0207701_11086829	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	663	Open in IMG/M
3300026118\|Ga0207675_100226458	All Organisms → cellular organisms → Bacteria	1803	Open in IMG/M
3300026285\|Ga0209438_1059945	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1252	Open in IMG/M
3300026313\|Ga0209761_1242112	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	727	Open in IMG/M
3300026317\|Ga0209154_1057478	All Organisms → cellular organisms → Bacteria → Proteobacteria	1718	Open in IMG/M
3300026331\|Ga0209267_1007363	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	6298	Open in IMG/M
3300026334\|Ga0209377_1319722	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	519	Open in IMG/M
3300026345\|Ga0257148_1014298	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	623	Open in IMG/M
3300026482\|Ga0257172_1085060	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	581	Open in IMG/M
3300026497\|Ga0257164_1005982	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1408	Open in IMG/M
3300026508\|Ga0257161_1024223	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1172	Open in IMG/M
3300026514\|Ga0257168_1089275	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	684	Open in IMG/M
3300026532\|Ga0209160_1177800	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	896	Open in IMG/M
3300027527\|Ga0209684_1059214	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	594	Open in IMG/M
3300027616\|Ga0209106_1088439	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	695	Open in IMG/M
3300027675\|Ga0209077_1046180	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1189	Open in IMG/M
3300027910\|Ga0209583_10104241	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1098	Open in IMG/M
3300028381\|Ga0268264_10929907	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	874	Open in IMG/M
3300028381\|Ga0268264_12600610	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	511	Open in IMG/M
3300031545\|Ga0318541_10196908	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1114	Open in IMG/M
3300031549\|Ga0318571_10187176	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	734	Open in IMG/M
3300031713\|Ga0318496_10564478	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	629	Open in IMG/M
3300031720\|Ga0307469_10444578	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1120	Open in IMG/M
3300031720\|Ga0307469_10500716	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1064	Open in IMG/M
3300031720\|Ga0307469_10947106	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	800	Open in IMG/M
3300031724\|Ga0318500_10500646	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	611	Open in IMG/M
3300031751\|Ga0318494_10674142	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	605	Open in IMG/M
3300031765\|Ga0318554_10227259	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1063	Open in IMG/M
3300031781\|Ga0318547_10178196	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1262	Open in IMG/M
3300031781\|Ga0318547_10745477	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	609	Open in IMG/M
3300031823\|Ga0307478_11550813	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	548	Open in IMG/M
3300031831\|Ga0318564_10378990	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	620	Open in IMG/M
3300031879\|Ga0306919_10114895	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1918	Open in IMG/M
3300031896\|Ga0318551_10469648	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	720	Open in IMG/M
3300031945\|Ga0310913_10590395	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	788	Open in IMG/M
3300032066\|Ga0318514_10318246	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	823	Open in IMG/M
3300032066\|Ga0318514_10395578	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	733	Open in IMG/M
3300032205\|Ga0307472_101030247	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	773	Open in IMG/M
3300032893\|Ga0335069_12384633	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	550	Open in IMG/M
3300033289\|Ga0310914_10178287	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1890	Open in IMG/M
3300033513\|Ga0316628_101927209	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	785	Open in IMG/M
3300034354\|Ga0364943_0413968	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	522	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	86.82%
Host-Associated	Host-Associated	13.18%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	70.54%
Aquatic	Environmental → Aquatic	16.28%
Plants	Host-Associated → Plants	13.18%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	69.77%
Sediment	Environmental → Aquatic → Sediment	11.63%
Rhizosphere	Host-Associated → Plants → Rhizosphere	7.75%
Rhizoplane	Host-Associated → Plants → Rhizoplane	4.65%
Freshwater	Environmental → Aquatic → Freshwater	3.88%
Marine	Environmental → Aquatic → Marine	0.78%
Floodplain	Environmental → Terrestrial → Floodplain	0.78%
Roots	Host-Associated → Plants → Roots	0.78%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	54.26%
Loam	Environmental → Terrestrial → Soil → Loam	12.40%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	11.63%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	6.98%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	4.65%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	3.10%
Sediment	Environmental → Aquatic → Freshwater → Sediment	2.33%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	1.55%
Wetlands	Environmental → Aquatic → Marine → Wetlands	0.78%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	0.78%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.78%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.78%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	20.93%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	20.16%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	13.18%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	11.63%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	6.98%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	6.20%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	6.20%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	4.65%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	3.10%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	2.33%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	1.55%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	0.78%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	0.78%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.78%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.78%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	15.50%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	10.08%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	9.30%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	8.53%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	7.75%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	6.20%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	6.20%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	5.43%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	3.10%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	3.88%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	3.88%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	2.33%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	1.55%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.55%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.55%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	1.55%
Natural And Restored Wetlands	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands	1.55%
Freshwater Wetlands	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands	0.78%
Freshwater Wetlands	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands	0.78%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	0.78%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.78%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	0.78%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grass Soil	0.78%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Corn, Switchgrass And Miscanthus Rhizosphere	0.78%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.78%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	0.78%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.78%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	0.78%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.78%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.78%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2065487018	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
2170459008	Grass soil microbial communities from Rothamsted Park, UK - March 2009 indirect DNA Tissue lysis 0-10cm	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300004267	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 6 MoBio	Environmental	Open in IMG/M
3300005178	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137	Environmental	Open in IMG/M
3300005294	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk Soil	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005354	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG	Host-Associated	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005549	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG	Environmental	Open in IMG/M
3300005552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150	Environmental	Open in IMG/M
3300005559	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149	Environmental	Open in IMG/M
3300005576	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157	Environmental	Open in IMG/M
3300005718	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2	Host-Associated	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005843	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2	Host-Associated	Open in IMG/M
3300005844	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2	Host-Associated	Open in IMG/M
3300006172	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2014	Environmental	Open in IMG/M
3300006358	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2	Host-Associated	Open in IMG/M
3300006577	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHPA (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300006847	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006903	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5	Host-Associated	Open in IMG/M
3300006914	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5	Host-Associated	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009091	Freshwater wetland microbial communities from Ohio, USA, analyzing the effect of biotic and abiotic controls - Mud 3 Core 4 Depth 3 metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009146	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 10-12cm March2015	Environmental	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009610	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT700	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300011119	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG	Host-Associated	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300011434	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT814_2	Environmental	Open in IMG/M
3300011441	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT513_2	Environmental	Open in IMG/M
3300012039	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT534_2	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012225	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT860_2	Environmental	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300012683	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaG	Environmental	Open in IMG/M
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012931	Freshwater wetland microbial communities from Ohio, USA - Open water 3 Core 3 Depth 3 metaG	Environmental	Open in IMG/M
3300014262	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_TuleA_D1	Environmental	Open in IMG/M
3300014268	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNE_CattailA_D1	Environmental	Open in IMG/M
3300014864	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT231A'_16_10D	Environmental	Open in IMG/M
3300014867	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT433_16_10D	Environmental	Open in IMG/M
3300014880	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT660_16_10D	Environmental	Open in IMG/M
3300014881	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLIBT47_16_1Da	Environmental	Open in IMG/M
3300014883	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT760_16_10D	Environmental	Open in IMG/M
3300014884	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT730_16_1Da	Environmental	Open in IMG/M
3300014885	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLIBT47_16_10D	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300025551	Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_ThreeSqA_D2 (SPAdes)	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025930	Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)	Environmental	Open in IMG/M
3300026118	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026285	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_20cm (SPAdes)	Environmental	Open in IMG/M
3300026313	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_40cm (SPAdes)	Environmental	Open in IMG/M
3300026317	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121 (SPAdes)	Environmental	Open in IMG/M
3300026331	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137 (SPAdes)	Environmental	Open in IMG/M
3300026334	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141 (SPAdes)	Environmental	Open in IMG/M
3300026345	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - CO-14-A	Environmental	Open in IMG/M
3300026482	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DW-16-B	Environmental	Open in IMG/M
3300026497	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - CO-08-B	Environmental	Open in IMG/M
3300026508	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NR-01-A	Environmental	Open in IMG/M
3300026514	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DL-13-B	Environmental	Open in IMG/M
3300026532	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153 (SPAdes)	Environmental	Open in IMG/M
3300027527	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 6 MoBio (SPAdes)	Environmental	Open in IMG/M
3300027616	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM1_M3 (SPAdes)	Environmental	Open in IMG/M
3300027675	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 10-12cm March2015 (SPAdes)	Environmental	Open in IMG/M
3300027910	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2014 (SPAdes)	Environmental	Open in IMG/M
3300028381	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031549	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f24	Environmental	Open in IMG/M
3300031713	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f22	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031724	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f20	Environmental	Open in IMG/M
3300031751	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f24	Environmental	Open in IMG/M
3300031765	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f22	Environmental	Open in IMG/M
3300031781	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20	Environmental	Open in IMG/M
3300031823	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05	Environmental	Open in IMG/M
3300031831	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f20	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031896	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f19	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300032066	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f18	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300032893	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.1	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M
3300033513	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M2_C1_D5_C	Environmental	Open in IMG/M
3300034354	Sediment microbial communities from East River floodplain, Colorado, United States - 23_s17	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
GPINP_03225300	2065487018	Soil	RARGPVSLLALGKTDLDDLILNFPSLASKVLIKLAGIMAARLQMLIDAEIQRESDAHNGGTP
F48_00148750	2170459008	Grass Soil	FEEAAATGIEWVHLFSARARGPVSVVALGKADLDALSVNFPLAGNKVLMRLAGIMAMRLQMLLETQYLNESEAHAEAEP
JGI10216J12902_1000552451	3300000956	Soil	RWFSVRARGPVSLLALSKSDLDELILNFPPLANKVLTKLAGIMAARLQMLIDAEIQRESEAHEGGKP*
Ga0066396_100175102	3300004267	Tropical Forest Soil	VRARGPVSLLALGKSDLEALILNFPVLANKVLLRLAGIMAARLQMLIDAEGLRTSEVDHEGKR*
Ga0066396_100187161	3300004267	Tropical Forest Soil	GKSDLDALMLNFPVIANKVLIRLAGIMAMRLRMLVDAELSRESQDQAEGKP*
Ga0066688_102529071	3300005178	Soil	LALGKSDLDALSANFPLLANKVLMRLAGIMAIRLQMLLDAQYLMESENRQEADQ*
Ga0065705_111514652	3300005294	Switchgrass Rhizosphere	FSVRARGPVSLLALGKTDLDTLILNFPVLANKVLIHLAEIMAIRLQMLIDAEGLGESTTHPERTP*
Ga0066388_1028677202	3300005332	Tropical Forest Soil	VRARGPVSLLALGRSDLDALSVDFPVMANKVLTRLAGLLAARLSTLVDAEFLGASDEHAGSNQ*
Ga0070675_1018978461	3300005354	Miscanthus Rhizosphere	EAAATGTEWVHLFSVRARGPVSVVALGKADLDALSVNFPLAGNRVLMRLAGAMAMRLQMILEAQYLKESEEPPEAES*
Ga0070710_109853561	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	VIRWFSVRARGPVSLLALGKSDLDALMLNFPVLASKVLLRLAGIMAARLQMLIDAEGLRSSEEHHEGKR*
Ga0070705_1011678531	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	SVRWFSARARGPVSLLALGKSDLDALSVNFPPLANKVLMKLAGIMAIRFQILLDAQYLKESGEHPEAAP*
Ga0070704_1005918942	3300005549	Corn, Switchgrass And Miscanthus Rhizosphere	RARGPVSVVALGKADLDAVGVNFPLAANKVLTRLAGVMAMRLQMLLETQYLKEPEGHPEVEA*
Ga0066701_105222912	3300005552	Soil	MGTESVRWFSARARGPVSLLTLGKSDLDALSVNFPLLANKVLMRLAGIMAIRFRMLLDAQYLKESEEHQETDQ*
Ga0066700_102890062	3300005559	Soil	MGTESAHWFSARARGPVSLLALGKSDLDALSANFPLLANKVLMRLAGIMAIRLQMLLDAQYLMESENRQEADQ*
Ga0066708_106083682	3300005576	Soil	ESVRWFSARARGPVSLLTLGKSDLDALSVNFPLLANKVLMRLAGIMAIRFRMLLDAQYLKESEEHQETDQ*
Ga0068866_106007371	3300005718	Miscanthus Rhizosphere	AAVGTGASRWFSVRARGPVTLLALGKSDLDALIVNFPSLANKVLLRLTAVLAERLRMRIDAEILGQLEKLDGGEP*
Ga0066903_1028930332	3300005764	Tropical Forest Soil	GPVSLLALGKSDLDALIANFPVLANKVLIRLAGIMAIRLQMLIDAENLREAEEPREAKP*
Ga0066903_1049759081	3300005764	Tropical Forest Soil	VIRWFSVRARGPVSLLALGKPDLDALIANFPVLANKVLIRLAEIMAIRLQMLTDAEILRESGELDQGKR*
Ga0066903_1081754952	3300005764	Tropical Forest Soil	GKSDLDALMLNFPVIANKVLLRLAGIMAMRLRMLVDAELSRETQDHAEGKP*
Ga0068860_1028626882	3300005843	Switchgrass Rhizosphere	GVIRWFSVRARGPVSLLALGRSDVDALIANFPVLANKILIRLAGIMAMRLEILTEARTLGDSEDESEAPS*
Ga0068862_1015761442	3300005844	Switchgrass Rhizosphere	GPVTLLALGKSDLDALIVNFPSLANKILLRLAAVLADRLQMRIDAEILGHFEKLDGGEP*
Ga0075018_105039982	3300006172	Watersheds	RARGPVSLLALGKSDLDALSVNFPPLANKVLMKLAAVMAIRFQILLDAQYLKDSGEHPEAAP*
Ga0068871_1015997312	3300006358	Miscanthus Rhizosphere	RWFSVRARGPVSLLALGRSDVDVLIANFPVLATKVLIRLAGIMAMRLEILTEAHTLGDSQDESEAPS*
Ga0074050_118279882	3300006577	Soil	ARGAVSVVALGKADLDAVSVNFPLAANKVLMRLAGVMAMRLQMLLETQYLKESEGHPEGEP*
Ga0066659_110570692	3300006797	Soil	VRWFSARARGPVSLLTLGKSDLDALSVNFPLLANKVLMRLAGIMAIRFRMLLDAQYLKESEEHQETDQ*
Ga0075431_1009046281	3300006847	Populus Rhizosphere	SVRARGPVSLLALGKSDLDALILNFPPLANKVLTKLAGIMAARLQMLIDAEIQRESEAHEGGKP*
Ga0075425_1008314711	3300006854	Populus Rhizosphere	WFSARARGPVSLLTLGKSDLDALSVNFPLLANKVLMRLAGIMAIRFRMLLDAQYLKESEEHQETDQ*
Ga0075425_1018431582	3300006854	Populus Rhizosphere	ALGTGVIRWFSVRARGPVSLLALGKSDLDALMLNFPVLASKILLRLAGMMAARLQMLIDAEGLRSSEEHHEGKR*
Ga0075426_108863612	3300006903	Populus Rhizosphere	AFGRSDLQELILNFPVLANKVLVRLASIMAVRLQMLIDAEILRESEEHGEGKP*
Ga0075436_1008866981	3300006914	Populus Rhizosphere	VRARGPVSLLAFGRSDLQELILNFPVLANKVLVRLASIMAVRLQMLIDAEILRESEEHGEGKP*
Ga0099828_102597093	3300009089	Vadose Zone Soil	SARARGPVSLLALGKSDLDALSVNFPLLANKVLMSLAGLMAIRFRMLLDAQYLKEAEEHQEPDQ*
Ga0099828_115865651	3300009089	Vadose Zone Soil	SARARGPVSLLALGKSDLDALSVNFPLLANKVLMSLAGLMAIRFRMLLDAQYLKESEEHQEPDQ*
Ga0102851_102426661	3300009091	Freshwater Wetlands	RARGPVSVLALGKADLDALSVNFPLLASRVLMRLAGIMATRLQLLLDAQFLEEPEEPQEAEE*
Ga0066709_1014622692	3300009137	Grasslands Soil	SAAMGAESVRWFSARARGPVSLLTLGKSDLDALSVNFPLLANKVLMKLAGIMATRFRMLLDAQYLKESEEHQETDQ*
Ga0105091_101322692	3300009146	Freshwater Sediment	RGPVSVVALGKADLDALSVNFPPAANKVLMRLAGVMAVRLQMLLETQYLKESETHPETEP
Ga0105091_107882211	3300009146	Freshwater Sediment	RARGPVSLLALGKTDLDALTVNLPGLANKVLTRLASIVAGRLQMLIDDEILLREPDEQNGAKP*
Ga0075423_104277662	3300009162	Populus Rhizosphere	FSVRARGPVSLLALGKPDLDALIVEFPALANRVLVKLAGIMAARLHMLIDAETQRESEAPGGGTS*
Ga0075423_107833922	3300009162	Populus Rhizosphere	IRWFSVRARGPVSLLALGKSDLDALMLNFPVLANKILFRLAGIMAARLQMLIDAEGLRSSEEHHEGKR*
Ga0075423_116542911	3300009162	Populus Rhizosphere	RARGPVSLLALGKSDLDALMLNFPVLANKILLRLAGIMAARLQMLIDAEGLRSSEEHHEGKG*
Ga0105340_12249222	3300009610	Soil	SAALRTGVNRWFSVRARGPVSLLALGKSDLDELILHFPPLANKVLTKLAGIMAARLQMLIDVEIQRESEARSGGTP*
Ga0126373_124406031	3300010048	Tropical Forest Soil	DALIVNFPVAANKVLIRLAGIMAARLQMAIEAETLRESAEPPESKS*
Ga0126370_101047773	3300010358	Tropical Forest Soil	WFSVRARGPVSLLALGKSDLEALILNFPVLANKVLLRLAGIMAARLQMLIDAEGLRTSEVDHEGKR*
Ga0126370_104730671	3300010358	Tropical Forest Soil	LLALGKSDLDALIVNFPVAANKVLIRLAGIMAARLQMAIEAETLRESAEPPEGKS*
Ga0126370_111001642	3300010358	Tropical Forest Soil	VRWFSVRARGPVSLLALGKSDLDALVVNFPVAANKVLIRLAGIMASRLQMAIEAETLGESAEPPEGKS*
Ga0126370_116833771	3300010358	Tropical Forest Soil	RGPVSLLALGKSDLDALILNFPPLANKVLIKLAGIMAARLQMLIDAETQRESEAPGGGTS
Ga0126372_100071861	3300010360	Tropical Forest Soil	IGTGVTRWFSVRARGPVSLLALGKSDLDALMLNFPVIANKVLIRLAGIMAMRLRMLVDAELSRETQDHAEGKS*
Ga0126372_106384992	3300010360	Tropical Forest Soil	RWFSVRARGPVSLLALGKTDVDGLILNYPVLANKVLVRLAGIMTMRLQMLIDAELHRESEERAEDKA*
Ga0126372_120775472	3300010360	Tropical Forest Soil	LLALGKSDLDALAVSFPVAANKVLNKLAGIMAARLQMVIEAETLRESAEPPEGKSS*
Ga0126378_124673311	3300010361	Tropical Forest Soil	DALVVNFPVAANKVLIRLAGIMASRLQMTIEAETLRESAEPPEGKS*
Ga0126377_134228611	3300010362	Tropical Forest Soil	VSLLALGKSDLEALILNFPVLANKVLLRLAGIMAARLQMLIDAEGLRTSEVDHEGKR*
Ga0134122_104501992	3300010400	Terrestrial Soil	GPVSLLALGKSDLDALILNFPVLANKILLRLAGIMAARLQMLIDAEGLRSSEEHHEGKR*
Ga0134121_121329372	3300010401	Terrestrial Soil	TFEEWAAMGTQSTRVFSARARGPVSLLALGKSDLDALMVNFPLVANKVLMSLAGLMATRLQTLAYAQYLN*
Ga0105246_123466212	3300011119	Miscanthus Rhizosphere	FEESAAMGTESVRWFSARARGPVSLLALGKSDLDALSVNFPLLANKVLMSLAGLMAIRFRMLLDAQYLKEAEEHQEPDQ*
Ga0137393_117014162	3300011271	Vadose Zone Soil	GTESVRWFSARARGPVSLLALGKSDLDALSVNFPPLANKVLMKLAGIMAIRFQILLDAQYLKESGEHPEATP*
Ga0137464_10329272	3300011434	Soil	GSVSVVALGKADLDALSVNFPLAANKVLMRLAGVMAMRLQMLLETQYLEDSERHPEAEP*
Ga0137452_12475681	3300011441	Soil	TGTEWVHLFSARARGPVSVVALGKADLDAVSVNFPLAANKVLTRLVSVMAMRSQMLLETQYLKESQGHPGAEP*
Ga0137421_10811782	3300012039	Soil	WVHLFSARARGPGSVVALGKADLDALSVNFPLAANKVLMRLAGVMAMRLQMLLETQYLKESPGHPGAEP*
Ga0137399_103128362	3300012203	Vadose Zone Soil	TGTESVRWFSARARGPVSLLALGKSDLDALSVNFPPLANKVLMKLAGIMAIRFQILLDAQYLKESGEHPEATP*
Ga0137362_105252052	3300012205	Vadose Zone Soil	VSLLALGESDMDALIANFPMLANKVLMRLAGIMAIRLQMLLDAQYLIESEKHQETDQ*
Ga0137362_114792402	3300012205	Vadose Zone Soil	RARGPVSLLALGKSDLDALSVNFPPLANKVLMKLAGIMAIRFQILLDAQYLKESGEHPEAAP*
Ga0137434_10126101	3300012225	Soil	WVHLFSARARGPVSVVALGKADLDALSVNFPLAANKVLMRLAGVMAMRLQMLLETQYLEESEEPQEAEP*
Ga0137358_104081221	3300012582	Vadose Zone Soil	SAAMGTESVRWFSARARGPVSLLALGKSDLDALSVNFPPLANKVLMKLAGIMAIRFQILLDAQYLKESGEHPEATP*
Ga0137398_110460271	3300012683	Vadose Zone Soil	ESAAMGTESARWFSARARGPVSLLALGKSDLDALSVNFPLLANKVLMSLAGLMAIRFRMLLDAQYLKESEEHQETDQ*
Ga0137397_113357252	3300012685	Vadose Zone Soil	ARWFSARARGPVSLLALGRSDLDALIVNFPLLANKVLMRLAGLMAIRLQMLFDAQYLKEPKEHQETDQ*
Ga0137359_109466121	3300012923	Vadose Zone Soil	SVRWFSARARGPVSLLALGKSDLDALSVNFPLLANKVLMRLAGTMAIRLQMLLDAQYLIESEKHQETDQ*
Ga0137416_100651203	3300012927	Vadose Zone Soil	GPVSLLALGKSDLDALSVNFPLQANKVLMRLAGLMAIRLQMLFDAQYLKEPEEHQETDQ*
Ga0137404_115801492	3300012929	Vadose Zone Soil	SFEESAAMGTESVRWFSARARGPVSLLALGKSDLDALSVNFPLLANKVLMRLAGIMAISLQMLLDAQSEEHQETDQ*
Ga0153915_132133531	3300012931	Freshwater Wetlands	LGKADLEALSVAFPLAANKVLMRLAGIMAIRLQMLLDATYLKESGENQEADQ*
Ga0075301_10843722	3300014262	Natural And Restored Wetlands	GVIRWFSVRARGPVSLLALGKSDLDALIVNFPVLANKVLIKLAGLMAVRLQMLIDAEILRESDEHAEGKP*
Ga0075309_10915831	3300014268	Natural And Restored Wetlands	RGPVSLLALGKSDLDELILNFPPLANKVLTRLAGIMAARLQMLIDAETQRESEAPGGGTP
Ga0180068_10079092	3300014864	Soil	PVSVVALGKADLDAVSVNFPLAANKVLMRLAGVMAMRLQMILETQYLKESEEPPEAEP*
Ga0180076_11008612	3300014867	Soil	ARARGPVSVVALGKADLDALSVNFPLAANKVLMRLAGVMAMRLQMLLETQYLKESEEPPEAEP*
Ga0180082_10478201	3300014880	Soil	FEEAAATGTEWVHLFSARARGPASVVALGKADLDALSVNFPLAANKVLMRLAGVMAMRLQMLLETQYLKESQGHPGAEP*
Ga0180094_11524052	3300014881	Soil	LALGKSDLDAMMLNFPVLANKVLINLAGLMAMRMQLLLEAQDLLESEPGSEPEP*
Ga0180086_10970512	3300014883	Soil	VRWFSVRARGPVSLLALGKSDLDALIVNFPVAANKVLIRLAGIMAARLQMAIEAETLRESEEPPEGKS*
Ga0180104_10975431	3300014884	Soil	AAIGVGVIRWFSVRARGPVSLLALGKSDLDALILNFPVVANKVLIHLAEIMAIRLQMLIDAEGLRESTKHQERTP*
Ga0180104_11570861	3300014884	Soil	PACFEEAAATGTECVHLFSARARGPVSVVALGKADLDALSVNFPLAANKVLTRLASVMAMRLQMLLETQYLKESEEPPEVEP*
Ga0180063_10771971	3300014885	Soil	RWFSVRARGPVSLLALGKSDLDALIVNFPVLANKMLIKLAGLMAVRLQMLIDAEILRESEEHAEGKP*
Ga0182037_116133612	3300016404	Soil	ARGPVSLLALGKSDLDALIVNFPVAANKVLIRLAGIMAARLQMAIEAETLSEPKEPPEGE
Ga0066662_109299522	3300018468	Grasslands Soil	RWFSARARGPVSLLTLGKSDLDALSVNFPLLANKVLMRLAGIMAIRFRMLLDAQYLKESEEHQETDQ
Ga0210406_105679641	3300021168	Soil	FSARARGPVSLLALGKSDLDALMVNFPLVANKVLMSLGGLMATRLQTLAYAQYLNEPEEPQESSQ
Ga0210131_10571032	3300025551	Natural And Restored Wetlands	IRWFSVRARGSVSLLALGKSDLDALIVNFPVLANKVLIKLAGLMAVRLQMLIDAEILRESDEHAEGKP
Ga0207684_107271772	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	SAAMGTEAVRWFSARARGPVSLLTLGKSDLDALSVNFPLLANKVLMRLAGIMAIRFRMLLDAQYLKESEEHQETDQ
Ga0207663_111506042	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	MGTQSTRVFSARARGPVSLLALGKSDLDALMVNFPLVANKVLMSLAGLMATRLQTLAYAQYLNEPEEPQESSQ
Ga0207646_105134082	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	AALGTGVIRWFSVRARGPVSLLALGKSDLDALILNFPVLANKVLMRLAGIMAARLQMLIDAEGLGSSEEHHEGKR
Ga0207646_109989032	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	LLTLGKSDLDALSVNFPLLANKVLMRLAGIMAIRFRMLLDAQYLKESEEHQETDQ
Ga0207700_106365111	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	RELDLDALIVNFPVLANKVLVRLAGIIAMRLHMLIDSEIVGESEEHEEGKP
Ga0207701_110868291	3300025930	Corn, Switchgrass And Miscanthus Rhizosphere	IGAGVTRWFSVRARGPVSLLALGKSDLDTLILNFPVMANKVLIHLAEIMALRLQMLIDAEGLREPTEHPESTP
Ga0207675_1002264583	3300026118	Switchgrass Rhizosphere	SLLALGKSDLDALILNFPVLANKILLRLAGIMAARLQMLIDAEGLGSSGAHHEGKR
Ga0209438_10599451	3300026285	Grasslands Soil	SLLALGKSDLDALSVNFPPLANKVLMKLAGIMAIRFQILLDAQYLKESGEHPEATP
Ga0209761_12421121	3300026313	Grasslands Soil	LLALGKSDLDALSVNFPLLANKLLMRLAGIMAIRLQMLLDAQYLKEPEEHRETDQ
Ga0209154_10574783	3300026317	Soil	RARGPVSLLTLGKSDLDALSVNFPLLANKVLMRLAGIMAIRFRMLLDAQYLKESEKPQETDQ
Ga0209267_10073631	3300026331	Soil	MGAESVRWFSARARGPVSLLTLGKSDLDALSVNFPLLANKVLMRLAGIMAIRFRMLLDAQYLKESEKPQETDQ
Ga0209377_13197221	3300026334	Soil	RWFSARARGPVSLLALGKSDLDALSVNFPLLANKVLMRLAGIMAIRFRMLLDAQYLKESEEHQETDQ
Ga0257148_10142981	3300026345	Soil	FEESAATGTESVRWFSARARGPVSLLALGKSDLDALSVNFPPLANKVLMKLAGIMAIRFQILLDAQYLKESGEHPEATP
Ga0257172_10850601	3300026482	Soil	VRWFSARARGPVSLLALGKSDLDALSVNFPPLANKVLMKLAGIMAIRFQILLDAQYLKESGEHPEATP
Ga0257164_10059821	3300026497	Soil	TESVRWFSARARGPVSLLALGKSDLDALSVNFPPLANKVLMKLAGIMAIRFQILLDAQYLKESGEHPEATP
Ga0257161_10242232	3300026508	Soil	SLLALGKSDLDALSVNFPPLANKVLMRLAGIMAIRFQMLLDTQYLKESEEHQETAP
Ga0257168_10892751	3300026514	Soil	ATGTESVRWFSARARGPVSLLALGKSDLDALSVNFPPLANKVLMKLAGIMAIRFQILLDAQYLKESGEHPEATP
Ga0209160_11778001	3300026532	Soil	SFEESAAMGAESVRWFSARARGPVSLLTLGKSDLDALSVNFPLLANKVLMRLAGIMAIRFRMLLDAQYLKESEKPQETDQ
Ga0209684_10592141	3300027527	Tropical Forest Soil	GPVSLLALGKSDLDALIVNFPVAANKVLIRLAGIMASRLQMAIEAETLRESAEPPEGKS
Ga0209106_10884391	3300027616	Forest Soil	VSLLALGKSDLDALSVNFPLQANKVLMRLAGLMAIRLQMLFDAQYLKEPEEHQETDQ
Ga0209077_10461802	3300027675	Freshwater Sediment	EWVHLFSARARGPVSVVAFGQADLDALSVNFPPAANKVLMRLAGVMAVRLQMLLETQYLKESQAHPEAEP
Ga0209583_101042412	3300027910	Watersheds	FEESAAIGTGVTRWFSVRARGPVSLLALGRSDVDVLIANSPVLATKVLIRLAGIMAMRLEILTEAHTLGASDSSSEAPS
Ga0268264_109299071	3300028381	Switchgrass Rhizosphere	ESAAIGTGVIRWFSVRARGPVSLLALGRADLDGLIIDFPVLANKVLLRLAGIMAARLQMLIDAEGLRSAEEHQEDPR
Ga0268264_126006102	3300028381	Switchgrass Rhizosphere	GVIRWFSVRARGPVSLLALGRSDLDALIANFPVLANKILIRLAGIMAMRLEILTEARTLGDSEDESEAPS
Ga0318541_101969082	3300031545	Soil	KADLDALIVNFPGAANKVLIRLAGIMAARLQMAIEAETLGESAELSEGKS
Ga0318571_101871762	3300031549	Soil	LLALGKADLDALIVNFPGAANKVLIRLAGIMAARLQMAIEAETLGESAELSEGKS
Ga0318496_105644781	3300031713	Soil	SDLDALIVNFPVAANKVLIRLAGIMAARLQMAIEAETLSEPKEPPEGES
Ga0307469_104445782	3300031720	Hardwood Forest Soil	VFSARARGPVSLLALGKSDLDALMVNFPLVANKVLMSLAGLMATRLQTLAYAQYLNEPEEPQESSQ
Ga0307469_105007162	3300031720	Hardwood Forest Soil	LGTGVIRWFSVRARGPVSLLALGKSDLDALMLNFPVLANKILLRLAGIMAARLEMLIDAEGLRSSEEHHEGKR
Ga0307469_109471062	3300031720	Hardwood Forest Soil	VIRWFSVRARGPVSLLALGKSDLDALILDFPVLANKILLRLAGIMAARLQMLIDAEGLRSSEEHHEGKR
Ga0318500_105006461	3300031724	Soil	RARGPVSLLALGKSDLDALMLNFPVIANKVLLRLAGIMAIRLRMLVDAELSRESQDHAEGKP
Ga0318494_106741421	3300031751	Soil	LALGKADLDALIVNFPGAANKVLIRLAGIMAARLQMAIEAETLGESAELSEGKS
Ga0318554_102272591	3300031765	Soil	VLALGKSDLDALSVNFPALANKVLMRLAGILAIRLELLLDVQDLGPTPEHHGSDS
Ga0318547_101781961	3300031781	Soil	VRARGPVSLLALGKSDLDALVANFPVSANKVLLRLAGIMAARLQMAIEAETLRESEEPQEVKS
Ga0318547_107454771	3300031781	Soil	RARGPVSLLALGKSDLDALMLNFPVIANKVLLRLAGIMAMRLRMLVDAELSRESQDHAEGKP
Ga0307478_115508132	3300031823	Hardwood Forest Soil	VFSARARGPVSLLALGKSDLDALMANFPMVANKVLMSLAGLMATRLQTLAYAQYLNEPEEPQESSQ
Ga0318564_103789901	3300031831	Soil	VRARGPVSVLALGKSDLDALSVNFPALANKVLMRLAGILAIRLELLLDVQDLGPTPEHHGSDS
Ga0306919_101148953	3300031879	Soil	TGVTRWFSVRARGPVSLLALGKSDLDALMLNFPVIANKVLLRLAGIMAIRLRMLVDAELSRESQDHAEGKP
Ga0318551_104696482	3300031896	Soil	FSVRARGPVSVLALGKSDLDALSVNFPALANKVLMRLAGILAIRLELLLDVQDLGPTPEHHGSDS
Ga0310913_105903952	3300031945	Soil	VVRWFSVRARGPVSLLALGKADLDALIVNFPGAANKVLIRLAGIMAARLQMAIEAETLGESAELSEGKS
Ga0318514_103182461	3300032066	Soil	GKSDLDALSVNFPALANKVLMRLAGILAIRLELLLDVQDLGPTPEHHGSDS
Ga0318514_103955781	3300032066	Soil	VRARGPVSLLALGKADLDALIVNFPGAANKVLIRLAGIMAARLQMAIEAETLGESAELSEGKS
Ga0307472_1010302472	3300032205	Hardwood Forest Soil	RGPVSLLALGKSDLDALMLNFPVLANKILLRLAGIMAARLQMLIDAEGLRSSEEHHEGKR
Ga0335069_123846331	3300032893	Soil	LALGKSDLDALSVNFPLLANKVLMRLAGIMAIRLHMLLDAQYLKESDEHQGAEP
Ga0310914_101782871	3300033289	Soil	GKSDLDALIVNFPVAANKVLIRLAGIMAARLQMAIEAETLSEPKEPPEGES
Ga0316628_1019272092	3300033513	Soil	VTRWFSVRARGPVSLLALGRSDVDVLIANFPVLATKVLIRLAGIMAMRLEILTEAHTLGDSEDESEAPS
Ga0364943_0413968_2_208	3300034354	Sediment	ARWFSIRARGPVSLLALGKSDLDAMMLNFPVLANKVLINLAGLMSMRMQLLLEAQELLESEPGSEPEQ

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F064044

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences