Metagenome Family F064000

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F064000
Family Type	Metagenome
Number of Sequences	129
Average Sequence Length	96 residues
Representative Sequence	VVLRRLVGLSLVTAVLALAPAAHASPPDQTWIAGLYDNADFDDVILFITSGLGAVQPSLMWSPRVVALVVGLVSPADTPVQSLRRVASGPSRAPPLA
Number of Associated Samples	85
Number of Associated Scaffolds	129

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	35.66 %
% of genes near scaffold ends (potentially truncated)	38.76 %
% of genes from short scaffolds (< 2000 bps)	81.40 %
Associated GOLD sequencing projects	79
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.28

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (97.674 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (23.256 % of family members)
Environment Ontology (ENVO)	Unclassified (44.186 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (58.140 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 30.40% β-sheet: 0.00% Coil/Unstructured: 69.60%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.28
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.28
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 129 Family Scaffolds
PF00873	ACR_tran	23.26
PF08028	Acyl-CoA_dh_2	9.30
PF01522	Polysacc_deac_1	2.33
PF01381	HTH_3	2.33
PF01695	IstB_IS21	2.33
PF04392	ABC_sub_bind	1.55
PF00496	SBP_bac_5	1.55
PF13439	Glyco_transf_4	1.55
PF13579	Glyco_trans_4_4	1.55
PF00378	ECH_1	1.55
PF02775	TPP_enzyme_C	0.78
PF00903	Glyoxalase	0.78
PF13646	HEAT_2	0.78
PF02371	Transposase_20	0.78
PF00528	BPD_transp_1	0.78
PF13551	HTH_29	0.78
PF13544	Obsolete Pfam Family	0.78
PF13557	Phenol_MetA_deg	0.78
PF01425	Amidase	0.78

COG ID	Name	Functional Category	% Frequency in 129 Family Scaffolds
COG1960	Acyl-CoA dehydrogenase related to the alkylation response protein AidB	Lipid transport and metabolism [I]	9.30
COG0726	Peptidoglycan/xylan/chitin deacetylase, PgdA/NodB/CDA1 family	Cell wall/membrane/envelope biogenesis [M]	2.33
COG1484	DNA replication protein DnaC	Replication, recombination and repair [L]	2.33
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	1.55
COG0154	Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit or related amidase	Translation, ribosomal structure and biogenesis [J]	0.78
COG3547	Transposase	Mobilome: prophages, transposons [X]	0.78

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	97.67 %
Unclassified	root	N/A	2.33 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	97.67 %
Unclassified	root	N/A	2.33 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	97.67 %
Unclassified	root	N/A	2.33 %

Name	Rank	Taxonomy	Distribution
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	74.42 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	5.43 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	2.33 %
Unclassified	root	N/A	2.33 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.78 %

Name	Rank	Taxonomy	Distribution
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	74.42 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	2.33 %
Unclassified	root	N/A	2.33 %
Deinococcus-Thermus	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Deinococcus-Thermus	0.78 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.78 %

Name	Rank	Taxonomy	Distribution
Candidatus Rokubacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	74.42 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.33 %
Unclassified	root	N/A	2.33 %
Deinococci	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Deinococcus-Thermus → Deinococci	0.78 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.78 %

Name	Rank	Taxonomy	Distribution
unclassified Candidatus Rokubacteria	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria	9.30 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.33 %
Unclassified	root	N/A	2.33 %
Deinococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Deinococcus-Thermus → Deinococci → Deinococcales	0.78 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.78 %

Name	Rank	Taxonomy	Distribution
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	7.75 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.33 %
Unclassified	root	N/A	2.33 %
Candidatus Rokubacteria bacterium 13_1_40CM_4_67_11	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium 13_1_40CM_4_67_11	0.78 %
Candidatus Rokubacteria bacterium 13_1_20CM_4_68_9	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium 13_1_20CM_4_68_9	0.78 %
Deinococcaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Deinococcus-Thermus → Deinococci → Deinococcales → Deinococcaceae	0.78 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.78 %

Name	Rank	Taxonomy	Distribution
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	7.75 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.33 %
Unclassified	root	N/A	2.33 %
Deinococcus	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Deinococcus-Thermus → Deinococci → Deinococcales → Deinococcaceae → Deinococcus	0.78 %
Candidatus Rokubacteria bacterium 13_1_40CM_4_67_11	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium 13_1_40CM_4_67_11	0.78 %
Candidatus Rokubacteria bacterium 13_1_20CM_4_68_9	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium 13_1_20CM_4_68_9	0.78 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.78 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300002558\|JGI25385J37094_10013478	All Organisms → cellular organisms → Bacteria	2932	Open in IMG/M
3300002558\|JGI25385J37094_10033792	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1793	Open in IMG/M
3300002561\|JGI25384J37096_10004048	All Organisms → cellular organisms → Bacteria → Proteobacteria	5272	Open in IMG/M
3300002908\|JGI25382J43887_10001513	All Organisms → cellular organisms → Bacteria	9498	Open in IMG/M
3300002908\|JGI25382J43887_10039508	All Organisms → cellular organisms → Bacteria	2564	Open in IMG/M
3300002911\|JGI25390J43892_10079631	All Organisms → cellular organisms → Bacteria	743	Open in IMG/M
3300005166\|Ga0066674_10016994	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	3097	Open in IMG/M
3300005172\|Ga0066683_10169877	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	1342	Open in IMG/M
3300005174\|Ga0066680_10557490	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	720	Open in IMG/M
3300005174\|Ga0066680_10723354	All Organisms → cellular organisms → Bacteria	608	Open in IMG/M
3300005175\|Ga0066673_10160895	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1256	Open in IMG/M
3300005180\|Ga0066685_10224101	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1293	Open in IMG/M
3300005180\|Ga0066685_10559134	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	788	Open in IMG/M
3300005332\|Ga0066388_100069924	All Organisms → cellular organisms → Bacteria → Proteobacteria	3808	Open in IMG/M
3300005332\|Ga0066388_100112490	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	3222	Open in IMG/M
3300005332\|Ga0066388_101036146	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	1380	Open in IMG/M
3300005451\|Ga0066681_10098768	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	1667	Open in IMG/M
3300005518\|Ga0070699_101147416	Not Available	713	Open in IMG/M
3300005518\|Ga0070699_102063556	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	521	Open in IMG/M
3300005540\|Ga0066697_10255186	All Organisms → cellular organisms → Bacteria → Proteobacteria	1038	Open in IMG/M
3300005554\|Ga0066661_10272897	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	1045	Open in IMG/M
3300005555\|Ga0066692_10277101	All Organisms → cellular organisms → Bacteria	1062	Open in IMG/M
3300005559\|Ga0066700_10892871	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	591	Open in IMG/M
3300005575\|Ga0066702_10186108	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	1251	Open in IMG/M
3300005586\|Ga0066691_10615173	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	645	Open in IMG/M
3300005586\|Ga0066691_10675928	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	611	Open in IMG/M
3300005713\|Ga0066905_101347185	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	644	Open in IMG/M
3300006173\|Ga0070716_100908936	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	690	Open in IMG/M
3300006796\|Ga0066665_10992381	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium 13_1_40CM_4_67_11	645	Open in IMG/M
3300006797\|Ga0066659_10103289	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	1944	Open in IMG/M
3300006797\|Ga0066659_10257009	All Organisms → cellular organisms → Bacteria	1311	Open in IMG/M
3300006797\|Ga0066659_10268047	All Organisms → cellular organisms → Bacteria	1287	Open in IMG/M
3300006854\|Ga0075425_100166394	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	2531	Open in IMG/M
3300006871\|Ga0075434_101170062	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	781	Open in IMG/M
3300006871\|Ga0075434_101561075	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	669	Open in IMG/M
3300006904\|Ga0075424_101416060	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	738	Open in IMG/M
3300007076\|Ga0075435_100434390	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1131	Open in IMG/M
3300007255\|Ga0099791_10456532	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	618	Open in IMG/M
3300007265\|Ga0099794_10646056	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	562	Open in IMG/M
3300009012\|Ga0066710_103688553	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	576	Open in IMG/M
3300009089\|Ga0099828_10241326	All Organisms → cellular organisms → Bacteria	1619	Open in IMG/M
3300009090\|Ga0099827_10440069	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	1117	Open in IMG/M
3300009137\|Ga0066709_101127526	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Deinococcus-Thermus → Deinococci → Deinococcales → Deinococcaceae → Deinococcus	1154	Open in IMG/M
3300009137\|Ga0066709_101497138	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	974	Open in IMG/M
3300009162\|Ga0075423_10199830	All Organisms → cellular organisms → Bacteria	2097	Open in IMG/M
3300009162\|Ga0075423_10311372	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1650	Open in IMG/M
3300009162\|Ga0075423_10732581	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	1045	Open in IMG/M
3300010046\|Ga0126384_10045462	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	2998	Open in IMG/M
3300010046\|Ga0126384_10734007	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	878	Open in IMG/M
3300010046\|Ga0126384_10939989	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	783	Open in IMG/M
3300010047\|Ga0126382_10649275	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	877	Open in IMG/M
3300010301\|Ga0134070_10013500	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	2595	Open in IMG/M
3300010301\|Ga0134070_10060165	All Organisms → cellular organisms → Bacteria	1287	Open in IMG/M
3300010329\|Ga0134111_10417277	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	577	Open in IMG/M
3300010336\|Ga0134071_10010230	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	3749	Open in IMG/M
3300010336\|Ga0134071_10180570	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium 13_1_20CM_4_68_9	1036	Open in IMG/M
3300010336\|Ga0134071_10184053	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	1026	Open in IMG/M
3300010359\|Ga0126376_10011178	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	5600	Open in IMG/M
3300010359\|Ga0126376_10599241	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	1042	Open in IMG/M
3300010360\|Ga0126372_10319030	All Organisms → cellular organisms → Bacteria	1376	Open in IMG/M
3300010360\|Ga0126372_10374165	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	1288	Open in IMG/M
3300012199\|Ga0137383_10096130	All Organisms → cellular organisms → Bacteria	2148	Open in IMG/M
3300012199\|Ga0137383_10815905	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	681	Open in IMG/M
3300012203\|Ga0137399_10380105	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	1176	Open in IMG/M
3300012205\|Ga0137362_10531877	All Organisms → cellular organisms → Bacteria	1016	Open in IMG/M
3300012206\|Ga0137380_10051092	All Organisms → cellular organisms → Bacteria → Proteobacteria	3791	Open in IMG/M
3300012206\|Ga0137380_10383645	All Organisms → cellular organisms → Bacteria	1250	Open in IMG/M
3300012207\|Ga0137381_11721193	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	517	Open in IMG/M
3300012209\|Ga0137379_11043371	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	723	Open in IMG/M
3300012209\|Ga0137379_11151607	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	682	Open in IMG/M
3300012210\|Ga0137378_10408987	Not Available	1258	Open in IMG/M
3300012210\|Ga0137378_10774882	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	871	Open in IMG/M
3300012211\|Ga0137377_11289702	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	660	Open in IMG/M
3300012349\|Ga0137387_10528163	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	856	Open in IMG/M
3300012349\|Ga0137387_10603311	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	796	Open in IMG/M
3300012351\|Ga0137386_10764455	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	694	Open in IMG/M
3300012356\|Ga0137371_11032046	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	622	Open in IMG/M
3300012357\|Ga0137384_11543361	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	514	Open in IMG/M
3300012685\|Ga0137397_10400812	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	1022	Open in IMG/M
3300012685\|Ga0137397_10986495	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	621	Open in IMG/M
3300012929\|Ga0137404_11416607	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	642	Open in IMG/M
3300012930\|Ga0137407_10287350	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	1501	Open in IMG/M
3300012930\|Ga0137407_10288367	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1498	Open in IMG/M
3300012930\|Ga0137407_10986823	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	797	Open in IMG/M
3300012948\|Ga0126375_10247949	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	1204	Open in IMG/M
3300012948\|Ga0126375_10655660	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	810	Open in IMG/M
3300012948\|Ga0126375_11020064	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	675	Open in IMG/M
3300012948\|Ga0126375_12032118	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	509	Open in IMG/M
3300012971\|Ga0126369_10854578	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	994	Open in IMG/M
3300012976\|Ga0134076_10156184	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	937	Open in IMG/M
3300014154\|Ga0134075_10148469	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	1001	Open in IMG/M
3300015358\|Ga0134089_10046429	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	1574	Open in IMG/M
3300015359\|Ga0134085_10021103	All Organisms → cellular organisms → Bacteria	2481	Open in IMG/M
3300017654\|Ga0134069_1044698	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1384	Open in IMG/M
3300017656\|Ga0134112_10085408	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1175	Open in IMG/M
3300018431\|Ga0066655_10004617	All Organisms → cellular organisms → Bacteria → Proteobacteria	5522	Open in IMG/M
3300018431\|Ga0066655_10059269	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	2007	Open in IMG/M
3300018433\|Ga0066667_10058353	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	2372	Open in IMG/M
3300018468\|Ga0066662_10057963	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	2514	Open in IMG/M
3300018468\|Ga0066662_10250868	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	1446	Open in IMG/M
3300018468\|Ga0066662_12688670	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	527	Open in IMG/M
3300018482\|Ga0066669_10073684	All Organisms → cellular organisms → Bacteria	2268	Open in IMG/M
3300020170\|Ga0179594_10041032	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1527	Open in IMG/M
3300020170\|Ga0179594_10239461	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	683	Open in IMG/M
3300026301\|Ga0209238_1007727	All Organisms → cellular organisms → Bacteria → Proteobacteria	4264	Open in IMG/M
3300026323\|Ga0209472_1059725	All Organisms → cellular organisms → Bacteria	1605	Open in IMG/M
3300026324\|Ga0209470_1222639	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	776	Open in IMG/M
3300026328\|Ga0209802_1285717	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	549	Open in IMG/M
3300026332\|Ga0209803_1179199	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	799	Open in IMG/M
3300026334\|Ga0209377_1065367	Not Available	1580	Open in IMG/M
3300026528\|Ga0209378_1009218	All Organisms → cellular organisms → Bacteria	6083	Open in IMG/M
3300026536\|Ga0209058_1149960	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1096	Open in IMG/M
3300026537\|Ga0209157_1325805	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	556	Open in IMG/M
3300026538\|Ga0209056_10330990	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	1020	Open in IMG/M
3300026540\|Ga0209376_1141391	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1165	Open in IMG/M
3300027655\|Ga0209388_1182833	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	585	Open in IMG/M
3300031720\|Ga0307469_10631872	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	962	Open in IMG/M
3300031820\|Ga0307473_10117248	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	1453	Open in IMG/M
3300031820\|Ga0307473_10477438	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	836	Open in IMG/M
3300031820\|Ga0307473_10803684	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	671	Open in IMG/M
3300032174\|Ga0307470_11827641	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	515	Open in IMG/M
3300032180\|Ga0307471_100151650	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	2231	Open in IMG/M
3300032180\|Ga0307471_100224487	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	1906	Open in IMG/M
3300032180\|Ga0307471_100308267	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	1674	Open in IMG/M
3300032180\|Ga0307471_101145101	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	943	Open in IMG/M
3300032205\|Ga0307472_101607132	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	639	Open in IMG/M
3300032205\|Ga0307472_102377441	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	537	Open in IMG/M
3300032205\|Ga0307472_102435369	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	531	Open in IMG/M
3300032205\|Ga0307472_102760466	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	502	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	93.80%
Host-Associated	Host-Associated	6.20%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	93.80%
Plants	Host-Associated → Plants	6.20%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	93.80%
Rhizosphere	Host-Associated → Plants → Rhizosphere	6.20%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	87.60%
Loam	Environmental → Terrestrial → Soil → Loam	6.20%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	6.20%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	42.64%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	34.88%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	10.08%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	6.20%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	3.10%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	2.33%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.78%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	23.26%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	21.71%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	13.18%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	10.08%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	10.08%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	9.30%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	6.20%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	3.10%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.33%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.78%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002558	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_40cm	Environmental	Open in IMG/M
3300002561	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_40cm	Environmental	Open in IMG/M
3300002908	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_40cm	Environmental	Open in IMG/M
3300002911	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_2_20cm	Environmental	Open in IMG/M
3300005166	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_123	Environmental	Open in IMG/M
3300005172	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132	Environmental	Open in IMG/M
3300005174	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129	Environmental	Open in IMG/M
3300005175	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122	Environmental	Open in IMG/M
3300005180	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005451	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005540	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_146	Environmental	Open in IMG/M
3300005554	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110	Environmental	Open in IMG/M
3300005555	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141	Environmental	Open in IMG/M
3300005559	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149	Environmental	Open in IMG/M
3300005575	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_151	Environmental	Open in IMG/M
3300005586	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300007255	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1	Environmental	Open in IMG/M
3300007265	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010301	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09082015	Environmental	Open in IMG/M
3300010329	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_11112015	Environmental	Open in IMG/M
3300010336	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09082015	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012349	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaG	Environmental	Open in IMG/M
3300012351	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaG	Environmental	Open in IMG/M
3300012356	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG	Environmental	Open in IMG/M
3300012357	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaG	Environmental	Open in IMG/M
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300012976	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_0_1 metaG	Environmental	Open in IMG/M
3300014154	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09212015	Environmental	Open in IMG/M
3300015358	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300015359	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09182015	Environmental	Open in IMG/M
3300017654	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300017656	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_11112015	Environmental	Open in IMG/M
3300018431	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300020170	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad1_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300026301	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_20cm (SPAdes)	Environmental	Open in IMG/M
3300026323	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130 (SPAdes)	Environmental	Open in IMG/M
3300026324	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125 (SPAdes)	Environmental	Open in IMG/M
3300026328	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129 (SPAdes)	Environmental	Open in IMG/M
3300026332	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138 (SPAdes)	Environmental	Open in IMG/M
3300026334	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141 (SPAdes)	Environmental	Open in IMG/M
3300026528	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156 (SPAdes)	Environmental	Open in IMG/M
3300026536	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147 (SPAdes)	Environmental	Open in IMG/M
3300026537	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135 (SPAdes)	Environmental	Open in IMG/M
3300026538	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114 (SPAdes)	Environmental	Open in IMG/M
3300026540	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134 (SPAdes)	Environmental	Open in IMG/M
3300027655	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1 (SPAdes)	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI25385J37094_100134783	3300002558	Grasslands Soil	MGRRILGLLLIMTALALMPAAYASPPDPTWIAGLYDNADFDDVVLFITSGLGGIQPSLAWSPRVVALVVGVVPSVAISVPTSVSVASAPSRAPPLA*
JGI25385J37094_100337922	3300002558	Grasslands Soil	MLRRIVGLCVIAALLALVPAAQASPPDQTWIAGLYDNADFDDVILFITSGLGAVQPSLMWSPRVVAPVVGLVSPADTPVQSLRRVASGPSRAPPLA*
JGI25384J37096_100040487	3300002561	Grasslands Soil	MTALALMPAAYASPPDPTWIAGLYDNADFDDVVLFITSGLGGIQPSLAWSPRVVALVVGVVPSVAISVPTSVSVASAPSRAPPLA*
JGI25382J43887_100015132	3300002908	Grasslands Soil	MTALALMPAAYASPPDPTWIAGLYDNADFDDVVLXITSGLGGIQPSLAWSPRVVALVVGVVPSVAISVPTSVSVASAPSRAPPLA*
JGI25382J43887_100395082	3300002908	Grasslands Soil	VIARRIVGLVLVLTVLALLPAAYASPPDQTWIAGLYDNADYDDAVLFITSCLGGIQPNRAWCPHVASLVVGVVPPAEIPVRAFSPVTSGPSRAPPLA*
JGI25390J43892_100796311	3300002911	Grasslands Soil	RRILGLLLIMTALALMPAAYASPPDPTWIAGLYDNADFDDVVLFITSGLGGIQPSLAWSPRVVALVVGVVPSVAISVPTSVSVASAPSRAPPLA*
Ga0066674_100169942	3300005166	Soil	MIPRLIGLGLVAAILTLAPFTHASPPDQTWIAGFYDNADFDDVVLFITGGLGALQPSLEWSPSIVAPTAGLVPPADRPVKPLRRVALGPSRAPPLA*
Ga0066683_101698772	3300005172	Soil	PARSSVPSGVAVAAMLRKVMIPRLIGLGLVAAILTLAPFTHASPPDQTWIAGFYDNADFDDVVLFITGGLGALQPSLEWSPSIVAPTAGLVPPADRPVKPLRRVALGPSRAPPLA*
Ga0066680_105574901	3300005174	Soil	LALLPAAYASPPDQTWIAGLYDNADYDDAVLFITSCLGGIQPNRAWCPHVASLVVGVVPPAEIPVRAFSPVTSGPSRAPPLA*
Ga0066680_107233541	3300005174	Soil	VVPSLVAAILALAPAAHASSPDQSWIAGLYDNADFDDVILFITSGLGDAQPSLLWSPRVVALVVGLVSPVDTAAPALSPPSPARGRAPPLA*
Ga0066673_101608951	3300005175	Soil	MLRKVMIPRLIGLGLVAAILTLAPFTHASPPDQTWIAGFYDNADFDDVVLFITGGLGALQPSLEWSPSIVAPTAGLVPPADRPVKPLRRVALGPSRAPPLA*
Ga0066685_102241013	3300005180	Soil	SVPSGVAVAAMLRKVMIPRLIGLGLVAAILTLAPFTHASPPDQTWIAGFYDNADFDDVVLFITGGLGALQPSLEWSPSIVAPTAGLVPPADRPVKPLRRVALGPSRAPPLA*
Ga0066685_105591341	3300005180	Soil	MLDRLVGLSLLAVLLALAPAADATPPDQTWIAGLYDNADFDDVILFIRSGLGAVQPSLMWSPRVVAPVVGLVSPADTPVQSLRRVASGPSRAPPLA*
Ga0066388_1000699242	3300005332	Tropical Forest Soil	MLLTLIAGVFALVPAAYAIPPDQSWIAGLYDNADFDDVILFITIGFGDVQPSVLWSPHVAVVVVGSVSPADVAAHARSPRGSAWSRAPPLA*
Ga0066388_1001124903	3300005332	Tropical Forest Soil	MALQPGASARYLRDVTSRRILSLVLVLAALALTPAAYASPPDPSWIAGLYDNADFDDVVLFITSGLGGVQPSLEWSPRVVSLVVGVVPPVEISVPTSVSLASAPSRAPPLA*
Ga0066388_1010361461	3300005332	Tropical Forest Soil	VILHRLVGLCVVAAIVALTPAAHASPPDQTWIGGLYDNADFDDVILFIVSGLGAVQPSLVWSPRMVALVVGLVSPAGTPVQSLPRVASDPSRAPPFA*
Ga0066681_100987682	3300005451	Soil	MIPRLIGLGLVAAILTLAPFTHASPPDQTWIAGFYDNADFDDVVLFITGGLGALQPSLEWSPSIVAPTAGLVPPADRPVKPLRRVALGPSRAPPLT*
Ga0070699_1011474162	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	MRSVEFLRASRPGGIGLLLVMTMLALLPAAYASPPDQTWIAGLYDNADYDDAVVFITSCFGGIQPNRAWCPHVASLVVGVVPPAEIPVPASAPVASGP
Ga0070699_1020635561	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	MGRRILGLLLIMTALALMPAAYASPPDQTWIAGLYDNADFDDVVLFITSGLGGIQPSLAWSPRVVALVVGVVPSVAVSVPTSVSVASGPSRAPPLA*
Ga0066697_102551862	3300005540	Soil	VIARRIFGLVLVITVLALLPAAYASPPDQTWIAGLYDNADYDDAVLFITSCLGGIQPNRSWCPHVASLVVGVIPPAEIPVPASAPVTSGPSRA
Ga0066661_102728973	3300005554	Soil	VAATAREVILHGLVVPSLVAAILALAPAAHASSPDQSWIAGLYDNADFDDVILFITSGLGDAQPSLLWSPRVVALVVGLVSPVDTAAPALSPPSPARGRAPPLA*
Ga0066692_102771012	3300005555	Soil	VIARRIVGLVLVLTVLALLPAAYASPPDQTWIAGLYDNADYDDAVLFITSCLGGIQPNRSWCPHVASLVVGVIPPAEIPVPASAPVTSGPSRAPPLA*
Ga0066700_108928711	3300005559	Soil	MIPRLIGLGLVAAILTLAPLTHASPPDQTWIAGFYDNADFDDVVLFITGGLGALQPSLEWSPSIVAPTAGLVPPADRPVKPLRRVALGPSRAPPLA*
Ga0066702_101861082	3300005575	Soil	MGRRILGLLLIMTALALMPAAYASPPDPTWIAGLYDNADFDDVVLFITSGLGGIQPSLAWSPRVVALVVGVVPSVAISVPTSVSVASAPSRAPPLPLTSRP*
Ga0066691_106151732	3300005586	Soil	MIPRLIGLGLVAAILTLAPFTHASPPDQTWIAGFYDNADFDDVVLFITGGLGALQPSLEWSPSIVAPTAGLVPPADRPGKPLRRVALGPSRAPPLA*
Ga0066691_106759281	3300005586	Soil	VVLRRLVGLSLVTAVLALAPAAHACPPDQTWIAGLYDNADFDDVILFITSGLGAVQPSLMWSPRVVALVVGLVSPADTPVQSLRRVASGPSRAPPLA
Ga0066905_1013471852	3300005713	Tropical Forest Soil	LVLAALALTPAAYASPPDQTWVAGLYDNADFDDVVLFITSGLGGVQPSLEWSPRVVSLVVGVVPPVEMSVPTSVSLASAPSRAPPLA*
Ga0070716_1009089362	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	VIAGRIVGLVLVLTVLALLPAAYASPPDQTWIAGLYDNADYDDAVVFITSCFGGIQPNRAWCPHVASLVVGVVPPAEIPVPASAPVASGPSRAPPLA*
Ga0066665_109923811	3300006796	Soil	VKFWARSSLLVSSRPLVGLSLIATVVALAPAAHASPPDQTWIAGLYDNADYDDVILFIMRGLGAVQPSLVWSPRIVALVVGLVSSANTPVPGLPPAAFGPSRAPPFA*
Ga0066659_101032892	3300006797	Soil	MTALALMPAAYASPPDPTWIAGLYDNADFDDVVLFITSGLGGIQPSLAWSPRVVALVVGVVPSVAISVPTSVSVASAPSRAPPLPLTSRP*
Ga0066659_102570092	3300006797	Soil	VIARRIFGLVLVITVLALLPAAYASPPDQTWIAGLYDNADYDDAVLFITSCLGGIQPNRSWCPHVASLVVGVIPPAEIPVPASAPVTSGPSRAPPLA*
Ga0066659_102680472	3300006797	Soil	MIPRLIGLGLVAAILTLAPFTHASPPDQTWIAGFYDNADFDDVVLFITGVGALQPSLEWSPSIVAPTAGLVPPADRPGKPLRRVALGPSRAPPLA*
Ga0075425_1001663942	3300006854	Populus Rhizosphere	VTSRRILNLLLLVALLALTPAAYASPPDQTWIAGLYDNADFDDVVLFITGGLGGVQPSLLWSPRVVALVVGLVPPADTPIPALAPLAAGPSRAPPLA*
Ga0075434_1011700621	3300006871	Populus Rhizosphere	EAVSGTMSSISVLSSPPIRRDRFVIVHRLVSLSAVIAILALTPAAHASPPDQTWITGLYDNADFDDVIIFITSGLGAVQPGLLWSPRAVALVVGLVSQADTPVRSIRSVDLAPSRAPPLTSQSRA*
Ga0075434_1015610752	3300006871	Populus Rhizosphere	PAAYASPPDQTWIAGLYDNADFDDVVLFITSGLGGIQPSLTWSPRVVALVVGVVPSVPISIPTSVSVASGPSRAPPLA*
Ga0075424_1014160602	3300006904	Populus Rhizosphere	SSPPIRRDRFVIVHRLVSLSAVIAILALTPAAHASPPDQTWITGLYDNADFDDVIIFITSGLGAVQPGLLWSPRAVALVVGLVSQADTPVRSIRSVDLAPSRAPPLTSQSRA*
Ga0075435_1004343901	3300007076	Populus Rhizosphere	SLVTAILALTPAAHASPPDQTWITGLYDNADFDDVIIFITSGLGAVQPGLLWSPRAVALVVGLVSQADTPVRSIRSVDLAPSRAPPLTSQSRA*
Ga0099791_104565322	3300007255	Vadose Zone Soil	IRMALQPGASARYLQNVTCRRILGLVLVMTALALTPAAYASPPDQTWIAGLYDNADYDDVVLFITSGLGGIQPSLAWSPRVVALVVGVVLSVEISAPTSDSVASGPSRAPPLA*
Ga0099794_106460562	3300007265	Vadose Zone Soil	VIARRIVGLVLVLTVLALLPAAYASPPDQTWIAGLYDNADYDDVVLFITSGLGGIQPSLAWSPRVVALVVGVVLSVEISAPTSD
Ga0066710_1036885531	3300009012	Grasslands Soil	VILRGLVGLCLVAAILTLVPAAHACPPDQTWIAGLYDNADFDDVILFIRSGLGAVQPSLMWSPRVVAPVVGLVSPPVTPVQSLRRVVAGPSRAPHPAYYP
Ga0099828_102413262	3300009089	Vadose Zone Soil	MVRSLIYWRTISLLLIAALLALTPAAYASPPDQTWISGLYDDADYDDVVLFITSGLGGIQPTLVWAPRVVAPVIGLVPPADTPVPALPPVAFSLSRAPPLA*
Ga0099827_104400693	3300009090	Vadose Zone Soil	VILRRLVGLCLVAAILALAPAAHASPPDQTWITGLYDNADFDDVILFITSSLGAVQPSLVWSRRIVALVVGFVSPADTAAPVLSSSSSGPSRAPPLA*
Ga0066709_1011275263	3300009137	Grasslands Soil	VILHGLVVPSLVAAILALAPAAHASSPDQSWIAGLYDNADFDDVILFITSGLGDAQPSLLWSPRVVALVVGLVSPVDTAAPALSPPSPARGRAPPLA*
Ga0066709_1014971383	3300009137	Grasslands Soil	VILRGLVGLCLVAAILTLVPAAHACPPDQTWIAGLYDNADFDDVILFIRSGLGAVQPSLMWSPRVVAPVVGLVSPADTPVQSLRRVASGPSRAPPLA*
Ga0075423_101998302	3300009162	Populus Rhizosphere	MSSISVLSSPPIRRDRFVIVHRLVSLSAVIAILALTPAAHASPPDQTWITGLYDNADFDDVIIFITSGLGAVQPGLLWSPRAVALVVGLVSQADTPVRSIRSVDLAPSRAPPLTSQSRA*
Ga0075423_103113722	3300009162	Populus Rhizosphere	MPGYCTVVTSRRILNLLLLVALLALTPAAYASPPDQTWIAGLYDNADFDDVVLFITGGLGGVQPSLLWSPRVVALVVGLVPPADTPIPALAPLAAGPSRAPPLA*
Ga0075423_107325812	3300009162	Populus Rhizosphere	GLARDIFETVIARRILGLVLVLTVLALLPAAYASPPDQTWIAGMYDSADYDDAVLFITSSLGGIQPQRVWCPDVASLVVGVVSPAEIPVPALAPVTSGPSRAPPLA*
Ga0126384_100454622	3300010046	Tropical Forest Soil	VEAERTVVLPYGKALWRNAPVIFDRLVGLGLVAAILALAPLAHASPPDQTWIAGLYDNADFDDVIRCITSGLGAIQPSLAWSPCVVALVVGLVTPMDTKMRPLFSLSSDLSRAPPLA*
Ga0126384_107340072	3300010046	Tropical Forest Soil	MISRLIGLSLVAAVLALAPLTHASPPDQTWIAGFYDNADFDDVVLFITGGFGAVRPGLEWSPSIVAPTASLAPPADRPVKSLRRVAPGPSRAPPLA*
Ga0126384_109399891	3300010046	Tropical Forest Soil	VVVVAIIREAVLQRLVVLGLAAAVLALTPVAQASPPDQSWIGGLYDNADFDDVILFITIGLGDVQPSRLRSSRVVVLIVELVSPVDTPAHAVVPFPSASSRAPPLA*
Ga0126382_106492751	3300010047	Tropical Forest Soil	MISRLIGLSLVAAVLALAPLTHASPPDQTWIAGFYDNADFDDVVLFITGGFGAVRPGLEWSPSIVAPTASLAPLADRPVKSLRRVAPGPSRAPPLA*
Ga0134070_100135002	3300010301	Grasslands Soil	MLRKVMIPRLIGLGLVAAILTLAPFTHASPPDQTWIAGFYDNADFDDVVLFITGGLGALQPSLEWSPSIVAPTAGLVPPADRPGKPLRRVALGPSRAPPLA*
Ga0134070_100601652	3300010301	Grasslands Soil	MGRRILGLLLIMTALALMPAAYASPPDPTWIAGLYDNADFDDVVLFITSGLGGIQPSLAWSPRVVALVVGVVPSVAISVPPSVSVASAPSRAPPLA*
Ga0134111_104172771	3300010329	Grasslands Soil	AYASPPDPTWIAGLYDNADFDDVVLFITSGLGGIQPSLAWSPRVVALVVGVVPSVAISVPTSVSVASAPSRAPPLA*
Ga0134071_100102302	3300010336	Grasslands Soil	MLRKVMIPRLIGLGLVAAILTLAPLTHASPPDQTWIAGFYDNADFDDVVLFITGVGALQPSLEWSPSIVAPTAGLVPPADRPVKPLRRVALGPSRAPPLA*
Ga0134071_101805701	3300010336	Grasslands Soil	PPDPTWIAGLYDNADFDDVVLFITSGLGGIQPSLAWSPRVVALVVGVVPSVAISVPTSVSVASAPSRAPPLA*
Ga0134071_101840532	3300010336	Grasslands Soil	MTLQPKAGASYLRNVICRRIFGLVLIVTALTLTPAAYASPADQTWIAGLYDNADFDDVVLFITSGLGGVQPSLTWSPRVVALVVGVVPSVEISVPTSVFVTSGPSRAPPFA*
Ga0126376_100111783	3300010359	Tropical Forest Soil	MALQPNASARYLRNVTCQRILGLVLVLAALALTPAAYASPPDQTWVAGLYDNADFDDVVLFITSGLGGVQPSLEWSPRVVSLVVGVVPPVEMSVPTSVSLASAPSRAPPLA*
Ga0126376_105992412	3300010359	Tropical Forest Soil	MISRLIGLSLVAAVLALAPLTHASPPDQTWIAGFYDNADFDDVVLFITGGLGAVQPSLEWSPSIAAPTAGFAPQADRPVKSLRRVAPGPSRAPPLA*
Ga0126372_103190301	3300010360	Tropical Forest Soil	LALTPAAYASPPDPSWIAGLYDNADFDDVVLFITSGLGGVQPSLVWSPRVVVRVVGVVPPVEISVPSSVSLASGPSRAPPLA*
Ga0126372_103741653	3300010360	Tropical Forest Soil	MALQPNASARYLRNVTCQRILGLVLVLAALALTPAAYASPPDQTWVAGLYDNADFDDVVLFITSGLGGVQPSLEWSPRVVSLVVGVVPPVEISVPTSVSLASAPSRAPPLA*
Ga0137383_100961303	3300012199	Vadose Zone Soil	VVLRRLVGLSLVTAVLALAPAAHASPPDQSWIPGLYDNADFDDVILFITSGLGAVQPSLMWSLRVVAPVVGLVSPADTPVQSLRRVASGPSRAPPLA*
Ga0137383_108159051	3300012199	Vadose Zone Soil	LVAAILTLAPFTHASPPDQTWIAGFYDNADFDDVVLFITGGLGALQPSLEWSPSIVAPTADLVPPADRPGKTLRRVALGPSRAPPLA*
Ga0137399_103801052	3300012203	Vadose Zone Soil	MGRRILGLLLIMTALALMPAAYASPPDPTWIAGLYDNADFDDVVLFITSGLGGIQPSLAWSPRVVALVVGVVPSVAISVPTSVSVASCPSRAPPLA*
Ga0137362_105318771	3300012205	Vadose Zone Soil	SPPDQTWIAGLYDNADYDDVVLFITSGLGGIQPSLAWSPRVVALVVGVVLSVEISAPTSDSVASGPSRAPPLA*
Ga0137380_100510921	3300012206	Vadose Zone Soil	MGRRILGLILIMTALALTPAAYASPPDQTWIAGLYDNADFDDVVLFITSGLGGIQPSLAWSPRVVALVVGVVPSVAISVPTSVSVASAPSRAPPLA*
Ga0137380_103836451	3300012206	Vadose Zone Soil	IGLGLVAAILTLAPFTHASPPDQTWIAGFYDNADFDDVVLFITGGLGALQPSLEWSPSIVAPTAGLVPPADRPVKPLRRVALGPSRAPPLA*
Ga0137381_117211932	3300012207	Vadose Zone Soil	MLRKVMIPRLIGLGLVAAILTLAPFTHASPPDQTWIAGFYDNADFDDVVLFITGGLGALQPSLEWSPSLVAPTAGLVPPADRPVKPLRRVAL
Ga0137379_110433712	3300012209	Vadose Zone Soil	MALQPGASARYVQNVTCRRILGLVLVMTALALTPAAYASPPDQTWIAGLYDNADYDDVVLFITSGLGGIQPSLAWSPRVVALVVGVVLSVEISAPTSDSVASGPSRAPPLA*
Ga0137379_111516071	3300012209	Vadose Zone Soil	MPHRLVALGLTAAMLALAPVAHASPPDQTWIAGLYDNADFDDVILVITSDLGAVQPRAPWSLRVVALVVGLVSLIDPAAPVLSPSSSGPSRAPPLA*
Ga0137378_104089872	3300012210	Vadose Zone Soil	VIARRIVGLVLVLTVLALLPAAYASPPDQTWIAGLYDNADYDDAVLFITSCLGGIQPNRAWCPHVASLVVGVVPPAEIPVRAFSPVTSG
Ga0137378_107748821	3300012210	Vadose Zone Soil	MTALALTPAAYASPPDQTWIAGLYDNADYDDVVLFITSGLGGIQPSLAWSPRVVALVVGVVLSVEISAPTSDSVASGPSRAPPLA*
Ga0137377_112897022	3300012211	Vadose Zone Soil	MLRRIVGLCVIAALLALVPAAQASPPDQTWIAGLYDNADFDDVILFITSGLGAVQPSLMWSPRVVAPVVGLVSRADTPVKSLRRVASGPSRAPPLA*
Ga0137387_105281631	3300012349	Vadose Zone Soil	NLQSVMGRRILGLILIMTALALTPAAYASPPDQTWIAGLYDNADFDDVVLFITSGLGGIQPSLAWSPRVVALVVGVVPSVAISVPTSVSVASAPSRAPPLA*
Ga0137387_106033111	3300012349	Vadose Zone Soil	IGLGLVAAILTLAPFTHASPPDQTWIAGFYDNADFDDVVLFITGGLGALQPSLEWSPSIVAPTAGLVPPADRPGKPLRRGARGPSRAPPLAGDPARQVTAHSRPA*
Ga0137386_107644551	3300012351	Vadose Zone Soil	MGRRILGLLLVMTALALMPAAYASPPDPTWIAGLYDNADFDDVVLFITSGLGGIQPSLAWSPRVVALVVGVVPSVAISVPTSVSVASAPSRAPPLA*
Ga0137371_110320461	3300012356	Vadose Zone Soil	VILCRLVGLSLVTAVLALAPAAHASPPDQSWIPGLYDNADFDDVILFITSGLGAVQPSLMWSPRVVAPVVGLVSPADTPAQSLRRVASGPSRAPPLA*
Ga0137384_115433611	3300012357	Vadose Zone Soil	MPHRLVALGLTAVRLALAPLAHASQRDQTWIARLYDNADFDDVILVITSDLGAVQPRAPWSLRVVALVVGLVSLIDPAAPVLSPSSSGP
Ga0137397_104008123	3300012685	Vadose Zone Soil	MLRRIVGLCVIAALLALVPAAQASPPDQTWIAGLYDNADFEDVILFITSGLGAVQPSLMWSPRVVAPVVGLVSPADTPVQSLRRVASGPSRAPPLA*
Ga0137397_109864952	3300012685	Vadose Zone Soil	MTALALTPAAYASPPDQTWIAGLYDNADFDDVVLFITSGLGGIQPSLAWSPRVVALVVGVVPSVAISVPTSVSVASSPSRAPPLA*
Ga0137404_114166071	3300012929	Vadose Zone Soil	AAYASPPDQTWIAGLYDNADYDDAVLFITSCLGGIQPNRAWCPHVASLVVGVVPPAEIPVRAFSPVTSGPSRAPPLA*
Ga0137407_102873501	3300012930	Vadose Zone Soil	LALMPAAYASPPDPTWIAGLYDNADFDDVVLFITSGLGGIQPSLAWSPRVVALVVGVVPSVAISVPTSVSVASAPSRAPPLA*
Ga0137407_102883671	3300012930	Vadose Zone Soil	LTLAPFTHASPPDQTWIAGFYDNADFDDVVLFITGGLGALQPSLEWSPSIVAPTAGLVPPADRPVKPLRRVALGPSRAPPLA*
Ga0137407_109868231	3300012930	Vadose Zone Soil	MLRRIVGLCVIAALLALVPAAQASPPDQTWIAGLYDNADFEDVILFITSGLGAVQPSLMWSPRVVAPVVGLVSPADTPVQSLRRV
Ga0126375_102479491	3300012948	Tropical Forest Soil	MISRLIGLGLVAAVLALAPLTHASPPDQTWIAGFYDNADFDDVVLFITGGFGAVQPGLEWSPSIVAPTASLAPPADRPVKSLRRVAPGPSRAPPLA*
Ga0126375_106556602	3300012948	Tropical Forest Soil	VLGVCLVVVILALAPAAHASPPDQTWIAGLYDNADFDDVVLFITGGLDLVEPTLFWSQRTVALVVGLASPADSLVRSLRPLATRPSRAPPLA*
Ga0126375_110200642	3300012948	Tropical Forest Soil	VILHRLVGLGLIAAIVVLAPMAHASPPDQTWIAGLYDNADFDDVIRCITSGLGAIQPSLAWSPCVVALVVGLVTPMDTKMRPLFSLSSDLSRAPPLA*
Ga0126375_120321181	3300012948	Tropical Forest Soil	VTCRRILGLALVLAALALTPAAYASPPDQTWVAGLYDNADFDDVVLFITSGLGGVQPSLEWSPRVVSLVVGVVPPVEMSVPTSVSLASAPSRAPPLA*
Ga0126369_108545781	3300012971	Tropical Forest Soil	MLALSLLPVLLALVPLAYANPPDQTWLVGFYDDADFDDVVLFITSSLGGVQPSLEWSPRVVSLVVGVVPPVEISVPTSVSLASAPSRAPPLA*
Ga0134076_101561842	3300012976	Grasslands Soil	VIARRILGFVLVLTVLALLPAAYASPPDPTWIAGLYDNADYDDAVLFITSCLGGIQLQRAWCPHVASLVVGVVSPAEIPVPALAPVTSGPSRAPPLA*
Ga0134075_101484691	3300014154	Grasslands Soil	LMPAAYASPPDPTWIAGLYDNADFDDVVLFITSGLGGIQPSLAWSPRVVALVVGVVPSVAISVPTSVSVASAPSRAPPLA*
Ga0134089_100464292	3300015358	Grasslands Soil	MLRKVMIPRLIGLGLVAAILTLAPFTHASPPDQTWIAGFYDNADFDDVVLFITGGLGALQPSLEWSPSIVAPTAGLVPPADRPVKPLRRVALGPSRAPPLT*
Ga0134085_100211032	3300015359	Grasslands Soil	MLRKVMIPRLIGLGLVAAILTLAPFTHASPPDLTWLAGFYDNADFDDVVLFITGGLGALQPSLEWSPSIVAPTAGLVPPADRPVKPLRRVALGPSRAPPLA*
Ga0134069_10446981	3300017654	Grasslands Soil	MLRKVMIPRLIGLGLVAAILTLAPFTHASPPDQTWIAGFYDNADFDDVVLFITGGLGALQPSLEWSPSIVAPTAGLVPPADRPVKPLRRVALGPSRAPPLA
Ga0134112_100854081	3300017656	Grasslands Soil	RSGVAVAAMLRKVMIPRLIGLGLVAAILTLAPFTHASPPDQTWIAGFYDNADFDDVVLFITGGLGALQPSLEWSPSIVAPTAGLVPPADRPVKPLRRVALGPSRAPPLA
Ga0066655_100046174	3300018431	Grasslands Soil	MTALALMPAAYASPPDPTWIAGLYDNADFDDVVLFITSGLGGIQPSLAWSPRVVALVVGVVPSVAISVPTSVSVASAPSRAPPLA
Ga0066655_100592692	3300018431	Grasslands Soil	MIPRLIGLGLVAAILTLAPFTHASPPDQTWIAGFYDNADFDDVVLFITGGLGALQPSLEWSPSIVAPTAGLVPPADRPGKPLRRVALGPSRAPPLA
Ga0066667_100583534	3300018433	Grasslands Soil	MGRRILGLLLIMTALALMPAAYASPPDPTWIAGLYDNADFDDVVLFITSGLGGIQPSLAWSPRVVALVVGVVPSVAISVPTSVSVASAPSRAPPLA
Ga0066662_100579635	3300018468	Grasslands Soil	VLVITVLALLPAAYASPPDQTWIAGLYDNADYDDAVLFITSCLGGIQPNRSWCPHVASLVVGVIPPAEIPVPASAPVTSGPSRAPPLA
Ga0066662_102508683	3300018468	Grasslands Soil	MTALALMPAAYASPPDPTWIAGLYDNADFDDVVLFITSGLGGIQPSLAWSPRVVALVVGVVPSVAISVPTSVSVASAPSRAPPLPLTSRP
Ga0066662_126886702	3300018468	Grasslands Soil	VVLRRLVGLSLVTAVLALAPAAHASPPDQTWIAGLYDNADFDDVILFITSGLGAVQPSLMWSPRVVALVVGLVSPADTPVQSLRRVASGPSRAPPLA
Ga0066669_100736842	3300018482	Grasslands Soil	MIPRLIGLGLVAAILTLAPFTHASPPDQTWIAGFYDNADFDDVVLFITGGLGALQPSLEWSPSIVAPTAGLVPPADRPVKPLRRVALGPSRAPPLA
Ga0179594_100410322	3300020170	Vadose Zone Soil	VIARRIVGLVLVLTVLALLPAAYASPPDQTWIAGLYDNADYDDAVLFITSCLGGIQPNRAWCPHVASLVVGVVPPAEIPVRAFSPVTSGPSRAPPLA
Ga0179594_102394612	3300020170	Vadose Zone Soil	MGRRILGLLLVMTALALMPAAYASPPDPTWIAGLYDNADFDDVVLFITSGLGGIQPSLAWSPRVVALVVGVVPSVAISVPTSVSVASAPSRAPPLA
Ga0209238_10077276	3300026301	Grasslands Soil	ILGLLLIMTALALMPAAYASPPDPTWIAGLYDNADFDDVVLFITSGLGGIQPSLAWSPRVVALVVGVVPSVAISVPTSVSVASAPSRAPPLA
Ga0209472_10597252	3300026323	Soil	MIPRLIGLGLVAAILTLAPFTHASPPDQTWIAGFYDNADFDDVVLFITGGLGALQPSLEWSPSIVAPTAGLVPPADRPVKPLRRVALGPSRAPPLT
Ga0209470_12226392	3300026324	Soil	MIPRLIGLGLVAAILTLAPLTHASPPDQTWIAGFYDNADFDDVVLFITGGLGALQPSLEWSPSIVAPTAGLVPPADRPGKPLRRVALGPSRAPPLA
Ga0209802_12857172	3300026328	Soil	AAYASPPEQRWIAGLYDNADYDDAVLFITSCLGGIQPNRSWCPHVASLVVGVIPPAEIPVPASAPVTSGPSRAPPLA
Ga0209803_11791992	3300026332	Soil	IGLGLVAAILTLAPFTHASPPDQTWIAGFYDNADFDDVVLFITGGLGALQPSLEWSPSIVAPTAGLVPPADRPGKPLRRVALGPSRAPPLA
Ga0209377_10653672	3300026334	Soil	VIARRIFGLVLVITVLALLPAVYASPPDQTWIAGLYDNADYDDAVLFITSCLGGIQPNRSWCPHVASLVVGVIPPAEIP
Ga0209378_10092181	3300026528	Soil	MIPRLIGLGLVAAILTLAPFTHASPPDQTWIAGFYDNADFDDVVLFITGGLGALQPSLEWSPSIVAPTAGLVPPADRPVKPLRRV
Ga0209058_11499602	3300026536	Soil	MIPRLIGLGLVAAILTLAPFTHASPPDQTWIAGFYDNADFDDVVLFITGGLGALQPSLEWSPSIVAPTAGLVPPADRPGKPLRRVALGPSRAPRSPDIPLAV
Ga0209157_13258051	3300026537	Soil	AADADLVSRVILCRLVGLSLVTAVLALAPAAHASPPDQTWIAGLYDNADFDNVILFITSGLGAVQPSLMWSPRVVAPVVGLVSPADTPVQSLRRVASGPSRAPPLA
Ga0209056_103309902	3300026538	Soil	VIARRIFGLVLVITVLALLPAAYASPPDQTWIAGLYDNADYDDAVLFITSCLGGIQPNRSWCPHVASLVVGVIPPAEIPVPASAPVTSGPSRAPPLA
Ga0209376_11413912	3300026540	Soil	SGVAVAAMLRKVMIPRLIGLGLVAAILTLAPFTHASPPDQTWLAGFYDNADFDDVVLFITGGLGALQPSLEWSPSIVAPTAGLVPPADRPVKPLRRVALGPSRAPPLA
Ga0209388_11828331	3300027655	Vadose Zone Soil	IRMALQPGASARYLQNVTCRRILGLVLVMTALALTPAAYASPPDQTWIAGLYDNADYDDVVLFITSGLGGIQPSLAWSPRVVALVVGVVLSVEISAPTSDSVASGPSRAPPLA
Ga0307469_106318722	3300031720	Hardwood Forest Soil	VILRRLVGLSLVTAVLALAPVAHASPPDQTWIAGLYDNADFDDVILFITSGLGAVQPSLMWSPRVVAPVVGLVSPADTPVQSLRRVASGPSRAPPLA
Ga0307473_101172482	3300031820	Hardwood Forest Soil	VSLILVALLLALAPAAYASPPDQTWIGGLYDDGDYDDVVLFITGGLGGIQPELTWSPRVVVVVIGLVLQADPATPALTPLASGPSRAPPLA
Ga0307473_104774382	3300031820	Hardwood Forest Soil	MTLQPRTSARYLQNVTCRRILGLVLVMTALALMPAAYASPPDQTWIAGLYDNADLDDIVLFITSGLGGIQPSLTWSPRAVALVVGVVPSVPISIPTSVSVASGPSRAPPLA
Ga0307473_108036841	3300031820	Hardwood Forest Soil	LALTPVAYATPPDQTWIAGLYDNADYDDVILFITGGLGAVQPTLAWSPCVVALVVRLAPAADTPVPDLAPDASGPSRAPPLA
Ga0307470_118276412	3300032174	Hardwood Forest Soil	DQTWIAGLYDNADLDDIVLFITSGLGGIQPSLTWSPRAVALVVGVVPSVPISIPTSVSVASGPSRAPPLA
Ga0307471_1001516502	3300032180	Hardwood Forest Soil	VIARRIVGLVLVLTVLALLPAAYASPPDQTWIAGLYDNADYDDAVLFITSCLGGIQPNRAWCPHVASLVVDVVPPAEIAVPTCAPVTSGPSRAPPLA
Ga0307471_1002244872	3300032180	Hardwood Forest Soil	VSLILVALLLALAPAAYASPPDQTWIGGLYDDGDYDDVVLFITGGLGGIQPELAWSPRVVVVVIGLVLQADPATPALTPLASGPSRAPPLA
Ga0307471_1003082672	3300032180	Hardwood Forest Soil	MALQPGASARYVQNVTCRRILGLVLVMMALALTPAAYASPPDQTWIAGLYDNADFDDVVLFITSGLGGIQPSLTWSPRAVALVVGVVPSVPISIPTSVSVASGPSRAPPLA
Ga0307471_1011451012	3300032180	Hardwood Forest Soil	MIPRLIVLSLVAAILTLAPVAHASPPDQTWIAGFYDNADFDDVVLFIVGGLGAVQPSLEWSLSFVAPPAGLVPPADRPVKSLRRVASGPSRAPPLA
Ga0307472_1016071322	3300032205	Hardwood Forest Soil	VSLVLVALLLTLAPAAYASPPDQTWIGGLYDDGDYDDVVLFITGGLGGIQPDLTWSPRVVVVVIGLVLQADPAIPVLAPLASGPSRAPPLA
Ga0307472_1023774411	3300032205	Hardwood Forest Soil	VVVVAAIARLAIPQRLFVLSLITAVLALAPVAHASPPDQTWIAGLYDNADFDDVILFITSGLGAVQPSLMWSPRVVAPVVGLVSPADTPVQSLRRVASGPSRAPPLA
Ga0307472_1024353691	3300032205	Hardwood Forest Soil	GLARDIFETVIARRIVGLVVVLTVLALLPAAYASPPDQTWIAGLYDNADYDDAVLFITSCLGGIQPQRAWCPDVASLVVGVVSPAKIPVPALAPVTSGPSRAPPLA
Ga0307472_1027604661	3300032205	Hardwood Forest Soil	RLSLVAAVLTLAPLTHASPPDQTWIAGFYDNADFDDVVLFITGGLGALQPSLEWSPSIVAPTAGLVPPADRPVKPLRRVALGPSRAPPLA

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F064000

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences