NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome Family F063994

Metagenome Family F063994

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F063994
Family Type Metagenome
Number of Sequences 129
Average Sequence Length 54 residues
Representative Sequence MIFASVSAHGATGTWLDEILELGVPLVLFIGLWWWSTRKEKKKAKPAPEAEAKK
Number of Associated Samples 93
Number of Associated Scaffolds 129

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 5.51 %
% of genes near scaffold ends (potentially truncated) 22.48 %
% of genes from short scaffolds (< 2000 bps) 78.29 %
Associated GOLD sequencing projects 85
AlphaFold2 3D model prediction Yes
3D model pTM-score0.40

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Bacteria (98.450 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil
(22.481 % of family members)
Environment Ontology (ENVO) Unclassified
(40.310 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(50.388 % of family members)


 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      

 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Transmembrane (alpha-helical) Signal Peptide: No Secondary Structure distribution: α-helix: 36.59%    β-sheet: 0.00%    Coil/Unstructured: 63.41%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.40
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 129 Family Scaffolds
PF13115YtkA 33.33
PF13442Cytochrome_CBB3 32.56
PF00034Cytochrom_C 5.43
PF01523PmbA_TldD 5.43
PF05425CopD 3.10
PF13400Tad 1.55
PF07811TadE 1.55

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 129 Family Scaffolds
COG0312Zn-dependent protease PmbA/TldA or its inactivated homologGeneral function prediction only [R] 5.43
COG1276Putative copper export proteinInorganic ion transport and metabolism [P] 3.10

 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms98.45 %
UnclassifiedrootN/A1.55 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300001536|A1565W1_10093003All Organisms → cellular organisms → Bacteria744Open in IMG/M
3300002558|JGI25385J37094_10080856All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi1009Open in IMG/M
3300002562|JGI25382J37095_10137382All Organisms → cellular organisms → Bacteria812Open in IMG/M
3300005167|Ga0066672_10781647All Organisms → cellular organisms → Bacteria603Open in IMG/M
3300005171|Ga0066677_10019700All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi3098Open in IMG/M
3300005171|Ga0066677_10029165All Organisms → cellular organisms → Bacteria2627Open in IMG/M
3300005171|Ga0066677_10050104All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi2086Open in IMG/M
3300005172|Ga0066683_10078773All Organisms → cellular organisms → Bacteria1982Open in IMG/M
3300005175|Ga0066673_10156755All Organisms → cellular organisms → Bacteria1272Open in IMG/M
3300005175|Ga0066673_10158259All Organisms → cellular organisms → Bacteria1266Open in IMG/M
3300005176|Ga0066679_10044634All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi2522Open in IMG/M
3300005177|Ga0066690_10021612All Organisms → cellular organisms → Bacteria3596Open in IMG/M
3300005184|Ga0066671_10123339All Organisms → cellular organisms → Bacteria1473Open in IMG/M
3300005294|Ga0065705_10598987All Organisms → cellular organisms → Bacteria708Open in IMG/M
3300005355|Ga0070671_101742527All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi553Open in IMG/M
3300005444|Ga0070694_100692922All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium828Open in IMG/M
3300005446|Ga0066686_10198435All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi1344Open in IMG/M
3300005450|Ga0066682_10342863All Organisms → cellular organisms → Bacteria963Open in IMG/M
3300005467|Ga0070706_100125242All Organisms → cellular organisms → Bacteria2396Open in IMG/M
3300005518|Ga0070699_100073276All Organisms → cellular organisms → Bacteria2979Open in IMG/M
3300005555|Ga0066692_10332796All Organisms → cellular organisms → Bacteria → Proteobacteria963Open in IMG/M
3300005557|Ga0066704_10773847All Organisms → cellular organisms → Bacteria598Open in IMG/M
3300005558|Ga0066698_10688466All Organisms → cellular organisms → Bacteria676Open in IMG/M
3300005559|Ga0066700_10318264All Organisms → cellular organisms → Bacteria1098Open in IMG/M
3300005561|Ga0066699_11103666All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia547Open in IMG/M
3300005568|Ga0066703_10013566All Organisms → cellular organisms → Bacteria4011Open in IMG/M
3300005569|Ga0066705_10013779All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi3959Open in IMG/M
3300005569|Ga0066705_10120458All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium1582Open in IMG/M
3300006173|Ga0070716_100983473All Organisms → cellular organisms → Bacteria666Open in IMG/M
3300006854|Ga0075425_100948371All Organisms → cellular organisms → Bacteria983Open in IMG/M
3300006854|Ga0075425_101530803All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi753Open in IMG/M
3300007076|Ga0075435_100850744All Organisms → cellular organisms → Bacteria795Open in IMG/M
3300007258|Ga0099793_10238632All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi876Open in IMG/M
3300009012|Ga0066710_100022948All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi6997Open in IMG/M
3300009012|Ga0066710_100264913All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi2495Open in IMG/M
3300009012|Ga0066710_101993315All Organisms → cellular organisms → Bacteria862Open in IMG/M
3300009089|Ga0099828_10453999All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi1156Open in IMG/M
3300009090|Ga0099827_10134815All Organisms → cellular organisms → Bacteria2005Open in IMG/M
3300009090|Ga0099827_10192621All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi1692Open in IMG/M
3300009090|Ga0099827_10444017All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium1112Open in IMG/M
3300009090|Ga0099827_11870228All Organisms → cellular organisms → Bacteria523Open in IMG/M
3300009093|Ga0105240_12132902All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi581Open in IMG/M
3300009137|Ga0066709_100128637All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi3184Open in IMG/M
3300009137|Ga0066709_103631229All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi560Open in IMG/M
3300010303|Ga0134082_10379381All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium602Open in IMG/M
3300010325|Ga0134064_10335942All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium586Open in IMG/M
3300010326|Ga0134065_10292016All Organisms → cellular organisms → Bacteria622Open in IMG/M
3300010337|Ga0134062_10771784All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium512Open in IMG/M
3300011401|Ga0153984_1122339All Organisms → cellular organisms → Bacteria538Open in IMG/M
3300011992|Ga0120146_1055787All Organisms → cellular organisms → Bacteria651Open in IMG/M
3300011999|Ga0120148_1020576All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi1484Open in IMG/M
3300012189|Ga0137388_10528569All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi1096Open in IMG/M
3300012198|Ga0137364_10002813All Organisms → cellular organisms → Bacteria8832Open in IMG/M
3300012200|Ga0137382_10300737All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi1119Open in IMG/M
3300012200|Ga0137382_10387031All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi984Open in IMG/M
3300012202|Ga0137363_11376860All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi595Open in IMG/M
3300012203|Ga0137399_10106887All Organisms → cellular organisms → Bacteria2175Open in IMG/M
3300012203|Ga0137399_10490597All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi1030Open in IMG/M
3300012203|Ga0137399_10516609All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi1002Open in IMG/M
3300012203|Ga0137399_10906213All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi742Open in IMG/M
3300012203|Ga0137399_11169352All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium648Open in IMG/M
3300012208|Ga0137376_10334635All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi1314Open in IMG/M
3300012208|Ga0137376_11689391All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium524Open in IMG/M
3300012685|Ga0137397_10065149All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi2631Open in IMG/M
3300012918|Ga0137396_10228764All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi1370Open in IMG/M
3300012922|Ga0137394_10073002All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi2862Open in IMG/M
3300012922|Ga0137394_10859332All Organisms → cellular organisms → Bacteria758Open in IMG/M
3300012925|Ga0137419_10002071All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi9035Open in IMG/M
3300012927|Ga0137416_11601003All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium593Open in IMG/M
3300012930|Ga0137407_11296305All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi692Open in IMG/M
3300015241|Ga0137418_10213024All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi1662Open in IMG/M
3300017656|Ga0134112_10213593All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium757Open in IMG/M
3300017997|Ga0184610_1190100All Organisms → cellular organisms → Bacteria684Open in IMG/M
3300018027|Ga0184605_10052332All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi1740Open in IMG/M
3300018027|Ga0184605_10057426All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium1667Open in IMG/M
3300018027|Ga0184605_10116298All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium1188Open in IMG/M
3300018028|Ga0184608_10000805All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi8697Open in IMG/M
3300018028|Ga0184608_10109068All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi1163Open in IMG/M
3300018028|Ga0184608_10304272All Organisms → cellular organisms → Bacteria701Open in IMG/M
3300018061|Ga0184619_10419644All Organisms → cellular organisms → Bacteria602Open in IMG/M
3300018431|Ga0066655_10212975All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium1205Open in IMG/M
3300018433|Ga0066667_10122538All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium1780Open in IMG/M
3300018433|Ga0066667_11083340All Organisms → cellular organisms → Bacteria693Open in IMG/M
3300018468|Ga0066662_10490421All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi1115Open in IMG/M
3300018468|Ga0066662_10790939All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi919Open in IMG/M
3300018468|Ga0066662_11629255All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi674Open in IMG/M
3300018482|Ga0066669_10082707All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi2167Open in IMG/M
3300018482|Ga0066669_10510333All Organisms → cellular organisms → Bacteria1042Open in IMG/M
3300019885|Ga0193747_1000602All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium11474Open in IMG/M
3300019885|Ga0193747_1020586All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi1620Open in IMG/M
3300020006|Ga0193735_1010375All Organisms → cellular organisms → Bacteria2931Open in IMG/M
3300020018|Ga0193721_1036403All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi1301Open in IMG/M
3300020022|Ga0193733_1111896All Organisms → cellular organisms → Bacteria758Open in IMG/M
3300021078|Ga0210381_10014863All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi1970Open in IMG/M
3300022694|Ga0222623_10388919All Organisms → cellular organisms → Bacteria531Open in IMG/M
3300022756|Ga0222622_10190878All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium1353Open in IMG/M
3300022756|Ga0222622_10687710All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi743Open in IMG/M
3300025910|Ga0207684_10226490All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi1613Open in IMG/M
3300025910|Ga0207684_10423810All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium1143Open in IMG/M
3300026296|Ga0209235_1147927All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium939Open in IMG/M
3300026296|Ga0209235_1287943All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi502Open in IMG/M
3300026300|Ga0209027_1052098All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium1534Open in IMG/M
3300026318|Ga0209471_1133745All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi1043Open in IMG/M
3300026320|Ga0209131_1367328All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi536Open in IMG/M
3300026322|Ga0209687_1060618All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium1228Open in IMG/M
3300026327|Ga0209266_1069307All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi1647Open in IMG/M
3300026329|Ga0209375_1186533All Organisms → cellular organisms → Bacteria810Open in IMG/M
3300026333|Ga0209158_1058778All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium1546Open in IMG/M
3300026335|Ga0209804_1319333All Organisms → cellular organisms → Bacteria524Open in IMG/M
3300026523|Ga0209808_1004234All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi7335Open in IMG/M
3300026524|Ga0209690_1014223All Organisms → cellular organisms → Bacteria4157Open in IMG/M
3300026542|Ga0209805_1088087All Organisms → cellular organisms → Bacteria1492Open in IMG/M
3300026542|Ga0209805_1379309All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium542Open in IMG/M
3300026552|Ga0209577_10246610All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi1349Open in IMG/M
3300027587|Ga0209220_1175526All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi549Open in IMG/M
3300028536|Ga0137415_10073087All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium3289Open in IMG/M
3300028536|Ga0137415_10355654All Organisms → cellular organisms → Bacteria1268Open in IMG/M
3300028536|Ga0137415_11198171All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium574Open in IMG/M
3300028791|Ga0307290_10059943All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium1376Open in IMG/M
3300028799|Ga0307284_10076378All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium1222Open in IMG/M
3300028881|Ga0307277_10005461All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi4875Open in IMG/M
3300028884|Ga0307308_10275371All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi806Open in IMG/M
3300031720|Ga0307469_10654880All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi946Open in IMG/M
3300031720|Ga0307469_11392896All Organisms → cellular organisms → Bacteria668Open in IMG/M
3300031820|Ga0307473_10062414All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi1828Open in IMG/M
3300032180|Ga0307471_100399338All Organisms → cellular organisms → Bacteria1502Open in IMG/M
3300032180|Ga0307471_101017109All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium996Open in IMG/M


 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil22.48%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil20.93%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil15.50%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil6.98%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment6.20%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere4.65%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil3.88%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil3.88%
SoilEnvironmental → Terrestrial → Soil → Loam → Grasslands → Soil3.88%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment2.33%
PermafrostEnvironmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost2.33%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere2.33%
Groundwater SedimentEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment0.78%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere0.78%
Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil0.78%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere0.78%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere0.78%
Attine Ant Fungus GardensHost-Associated → Fungi → Mycelium → Unclassified → Unclassified → Attine Ant Fungus Gardens0.78%

Visualization
Powered by ApexCharts



Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300001536Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - (A15-65cm-8A)- 1 week illuminaEnvironmentalOpen in IMG/M
3300002558Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_40cmEnvironmentalOpen in IMG/M
3300002562Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_40cmEnvironmentalOpen in IMG/M
3300005167Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121EnvironmentalOpen in IMG/M
3300005171Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126EnvironmentalOpen in IMG/M
3300005172Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132EnvironmentalOpen in IMG/M
3300005175Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122EnvironmentalOpen in IMG/M
3300005176Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128EnvironmentalOpen in IMG/M
3300005177Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139EnvironmentalOpen in IMG/M
3300005184Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_120EnvironmentalOpen in IMG/M
3300005294Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk SoilEnvironmentalOpen in IMG/M
3300005355Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaGHost-AssociatedOpen in IMG/M
3300005444Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaGEnvironmentalOpen in IMG/M
3300005446Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135EnvironmentalOpen in IMG/M
3300005450Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131EnvironmentalOpen in IMG/M
3300005467Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaGEnvironmentalOpen in IMG/M
3300005518Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaGEnvironmentalOpen in IMG/M
3300005555Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141EnvironmentalOpen in IMG/M
3300005557Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153EnvironmentalOpen in IMG/M
3300005558Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147EnvironmentalOpen in IMG/M
3300005559Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149EnvironmentalOpen in IMG/M
3300005561Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148EnvironmentalOpen in IMG/M
3300005568Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152EnvironmentalOpen in IMG/M
3300005569Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154EnvironmentalOpen in IMG/M
3300006032Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145EnvironmentalOpen in IMG/M
3300006173Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaGEnvironmentalOpen in IMG/M
3300006854Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4Host-AssociatedOpen in IMG/M
3300007076Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4Host-AssociatedOpen in IMG/M
3300007258Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3EnvironmentalOpen in IMG/M
3300009012Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159EnvironmentalOpen in IMG/M
3300009089Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaGEnvironmentalOpen in IMG/M
3300009090Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaGEnvironmentalOpen in IMG/M
3300009093Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaGHost-AssociatedOpen in IMG/M
3300009137Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158EnvironmentalOpen in IMG/M
3300010303Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09182015EnvironmentalOpen in IMG/M
3300010325Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_2_0_1 metaGEnvironmentalOpen in IMG/M
3300010326Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_2_24_1 metaGEnvironmentalOpen in IMG/M
3300010337Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09082015EnvironmentalOpen in IMG/M
3300011401Attine ant fungus gardens microbial communities from Georgia, USA - TSGA068 MetaGHost-AssociatedOpen in IMG/M
3300011992Permafrost microbial communities from Nunavut, Canada - A23_65cm_12MEnvironmentalOpen in IMG/M
3300011999Permafrost microbial communities from Nunavut, Canada - A28_65cm_6MEnvironmentalOpen in IMG/M
3300012189Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaGEnvironmentalOpen in IMG/M
3300012198Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaGEnvironmentalOpen in IMG/M
3300012200Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaGEnvironmentalOpen in IMG/M
3300012202Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaGEnvironmentalOpen in IMG/M
3300012203Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaGEnvironmentalOpen in IMG/M
3300012208Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaGEnvironmentalOpen in IMG/M
3300012685Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaGEnvironmentalOpen in IMG/M
3300012918Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaGEnvironmentalOpen in IMG/M
3300012922Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaGEnvironmentalOpen in IMG/M
3300012925Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012927Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012930Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300015241Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300017656Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_11112015EnvironmentalOpen in IMG/M
3300017997Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100_coexEnvironmentalOpen in IMG/M
3300018027Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_coexEnvironmentalOpen in IMG/M
3300018028Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_coexEnvironmentalOpen in IMG/M
3300018061Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_b1EnvironmentalOpen in IMG/M
3300018431Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104EnvironmentalOpen in IMG/M
3300018433Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116EnvironmentalOpen in IMG/M
3300018468Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111EnvironmentalOpen in IMG/M
3300018482Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118EnvironmentalOpen in IMG/M
3300019885Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1m2EnvironmentalOpen in IMG/M
3300020006Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1m2EnvironmentalOpen in IMG/M
3300020018Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2s2EnvironmentalOpen in IMG/M
3300020022Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1s2EnvironmentalOpen in IMG/M
3300021078Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_5_coex redoEnvironmentalOpen in IMG/M
3300022694Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30_coexEnvironmentalOpen in IMG/M
3300022756Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1EnvironmentalOpen in IMG/M
3300025910Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300026296Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_20cm (SPAdes)EnvironmentalOpen in IMG/M
3300026300Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_20cm (SPAdes)EnvironmentalOpen in IMG/M
3300026318Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128 (SPAdes)EnvironmentalOpen in IMG/M
3300026320Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_40cm (SPAdes)EnvironmentalOpen in IMG/M
3300026322Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_136 (SPAdes)EnvironmentalOpen in IMG/M
3300026327Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132 (SPAdes)EnvironmentalOpen in IMG/M
3300026329Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131 (SPAdes)EnvironmentalOpen in IMG/M
3300026333Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140 (SPAdes)EnvironmentalOpen in IMG/M
3300026335Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139 (SPAdes)EnvironmentalOpen in IMG/M
3300026523Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157 (SPAdes)EnvironmentalOpen in IMG/M
3300026524Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150 (SPAdes)EnvironmentalOpen in IMG/M
3300026542Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148 (SPAdes)EnvironmentalOpen in IMG/M
3300026552Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109 (SPAdes)EnvironmentalOpen in IMG/M
3300027587Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM3_M3 (SPAdes)EnvironmentalOpen in IMG/M
3300028536Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300028791Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_144EnvironmentalOpen in IMG/M
3300028799Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_123EnvironmentalOpen in IMG/M
3300028881Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_116EnvironmentalOpen in IMG/M
3300028884Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_195EnvironmentalOpen in IMG/M
3300031720Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515EnvironmentalOpen in IMG/M
3300031820Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515EnvironmentalOpen in IMG/M
3300032180Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515EnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap


 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
A1565W1_1009300323300001536PermafrostMIYASVSAHGATGTWLDEILELGVPLVLFIGLWWWSTRKEKKKAKPT
JGI25385J37094_1008085623300002558Grasslands SoilMTFASLATHGVTGTWLDEILELGVPLALFLGLWWWSTRKEKRKAKAKSAEPETEK*
JGI25382J37095_1013738223300002562Grasslands SoilMIFASVSTHGATGTWLDEILELGVPLLLFIGLWWWSTRREKQKTKTKPAGKPEPPE*
Ga0066672_1078164723300005167SoilVIFLSLSAHGATGTWLDEILELGLPLALFAGLWWWSTRKEKKKKAKATAEAEAAKR*
Ga0066677_1001970013300005171SoilTGTWLDEILELGVPLVLFVGLWWWSTRKEKKKAKPPPSADAKK*
Ga0066677_1002916533300005171SoilMIFASVSTHGATGTWLDEILELGVPLVLFIGLWWWSTRKGKKKAKSAPASEPDAKK*
Ga0066677_1005010423300005171SoilMILASISAHGATGTWLDEILELGVPLALFVGLWWWSTRKDKKKRPKTKAAEPEAAKK*
Ga0066683_1007877323300005172SoilMIFASVSTHGATGTWLDEALELGVPLLLFIGLWWWSTRKEKQRTKAKPVEEAEPPK*
Ga0066673_1015675523300005175SoilMIYASVSAHGATGTWLDEILELGVPLVLFIGLWWWSTRKEKKKAKTAPKADVKK*
Ga0066673_1015825923300005175SoilMIIASVSAHGATGTWLDEILELGVPLVLFIGLWWWSTRKEKKKAKAATPKAEAKK*
Ga0066679_1004463433300005176SoilMIFASVSAHGATGTWLDEILELGVPLVLFVGLWWWSTRKEKKKAKPPPNADAKR*
Ga0066690_1002161223300005177SoilMIFASVSAHGATGTWLDEILELGVPLVLFVGLWWWSTRKEKKKAKPPPSADAKK*
Ga0066671_1012333923300005184SoilMIFASVSAHGATGTWLDEILELGVPLVLFIGLWWWSTRQEKKKAKAATPKAEAKK*
Ga0065705_1059898723300005294Switchgrass RhizosphereMIFASVSTHGATGTWLDEILELGVPLVLFIGLWWWSTRKEKKKAKSTPKADTKK*
Ga0070671_10174252713300005355Switchgrass RhizosphereLIFASVSAHGATGTWLDEVLELGVPLVLFVGLWWWSTRKEKNKVKPTAP
Ga0070694_10069292223300005444Corn, Switchgrass And Miscanthus RhizosphereMIYASVSAHGATGTWLDEILELGVPLVLFIGLWWWSTRKEKKKAKPAPKPDAEK*
Ga0066686_1019843523300005446SoilMTFASLATHGVTGTWLDEILELGVPLALFLGLWWWSTRKEKRKAKAKAPEPGTEK*
Ga0066682_1034286323300005450SoilMILASISAHGATGTWLDEILELGVPLALFVGLWWWSTRKDKKKRPKTRAAEPEPAKK*
Ga0070706_10012524223300005467Corn, Switchgrass And Miscanthus RhizosphereMIFASVSAHGATGTWLDEILELGVPLVLFVGLWWWSTRKEKKKAKSTSKADAKK*
Ga0070699_10007327643300005518Corn, Switchgrass And Miscanthus RhizosphereMIYASVSAHGATGTWLDEILELGVPLVLFIGLWWWSTRKEKKKAKPAPKPDPEK*
Ga0066692_1033279623300005555SoilMIFASVSTHGATGTWLDEALELGVPLLLFIGLWWWSTRKEKRKAKAKSAEPETEK*
Ga0066704_1077384723300005557SoilRRIPMIFASVSAHGATGTWLDEILELGVPLVLFVGLWWWSTRKEKKKAKPPPNADAKR*
Ga0066698_1068846623300005558SoilMTFASLATHGVTGTWLDEILELGVPLALFLGLWWWSTRKDKRKAKAKAPEPGTEK*
Ga0066700_1031826413300005559SoilHGATGTWLDEILELGVPLVLFVGLWWWSTRKEKKKAKATPAIKPDLEK*
Ga0066699_1110366623300005561SoilMILASISAHGATGTWLDEILELGVPLALFVGLWWWSTRKDKKKRPKTKAAEPAAAKK*
Ga0066703_1001356633300005568SoilMIFASVSTHGVTGTWLDEILELGVPLVLFVGLWWWSTRKEKKKAKATPAIKPDLEK*
Ga0066705_1001377953300005569SoilATGTWLDEILELGLPLALFAGLWWWSTRKEKKKKAKATAEAEAAKR*
Ga0066705_1012045823300005569SoilMILASISAHGATGTWLDEILELGVPLALFVGLWWWSTRKDKKKRPKTKAAEPEPAKK*
Ga0066696_1022479233300006032SoilGTWLDEILELGVPLALFVGLWWWSTRKDKKKRPKTRAAEPEPAKK*
Ga0070716_10098347313300006173Corn, Switchgrass And Miscanthus RhizosphereAHGATGTWLDEILELGLPLALFAGLWWWSTRKEKKKNKAKAAAEPQPAKK*
Ga0075425_10094837123300006854Populus RhizosphereMIFASVSAHGATGTWLDEILELGVPLVLFIGLWWWSTRKEKKKVKPAPKPDAEK*
Ga0075425_10153080323300006854Populus RhizosphereMIIASVSTHGATGTWLDEILELGVPLVLFIGLWWWSTRKEKKKAKPAPKPDAEK*
Ga0075435_10085074423300007076Populus RhizosphereVSAHGATGTWLDEILELGVPLVLFIGLWWWSTRKEKKKVKPAPKPDAEK*
Ga0099793_1023863223300007258Vadose Zone SoilMIFASVSTHGATGTWLDEILELGVPLVLFIGLWWWSTRKEKKKAKVKPAVKPDLEK*
Ga0066710_10002294833300009012Grasslands SoilMIYASVSAHGATGTWLDEILELGVPLVLFIGLWWWSTRKEKKKAKTAPRADVKK
Ga0066710_10026491323300009012Grasslands SoilMILASISAHGATGTWLDEILELGVPLVLFVGLWWWSTRKDKKKRPKTKAAEPEPAKK
Ga0066710_10199331523300009012Grasslands SoilMILASISAHGATGTWLDEILELGVPLALFVGLWWWSTRKDKKKRPKTRAAEPEPAKK
Ga0099828_1045399923300009089Vadose Zone SoilMTFASLATHGVTGTWLDEILELGLPLALFLGLWWWSTRKEKRKAKAK
Ga0099827_1013481523300009090Vadose Zone SoilMIFASVSAHGVTGTWLDEILELGVPLVLFIGLWCWSTRKEKKKAKSTPEANAKK*
Ga0099827_1019262123300009090Vadose Zone SoilMTFASLATHGVTGTWLDEILELGLPLALFLGLWWWSTRKEKRKAKAKSVEPETEK*
Ga0099827_1044401723300009090Vadose Zone SoilMTFASLATHGVTGTWLDEILELGLPLALFLGLWWWSTRKEKRKAKAKAPEPGAEK*
Ga0099827_1187022823300009090Vadose Zone SoilMIFASVSAHGATGTWLDEILELGVPLVLFVGLWWWSTRKEKKKAKPTPKADAKK*
Ga0105240_1213290223300009093Corn RhizosphereMILASVSAHGATGTWLDEVLELGVPLLLFVGLWWWSTRKEKKKDKSTPSAEAQPKK*
Ga0066709_10012863723300009137Grasslands SoilMILASISTHGATGTWLDEILELGVPLALFVGLWWWSTRKDKKKRPKTRAAEPEPAKK*
Ga0066709_10363122923300009137Grasslands SoilMILASVSTHGATGTWLDEILELGVPLLLFIGLWWWSTRKEKKARVKPAVKPEIEK*
Ga0134082_1037938123300010303Grasslands SoilMIFASVSAHGATGTWLDEILELGVPLVLFIGLWWWSTRNEKKKA
Ga0134064_1033594223300010325Grasslands SoilMILASISAHGATGTWLDEILELGVPLALFVGLWWWSTRKDKKKRPKTKAAEPEAAK
Ga0134065_1029201623300010326Grasslands SoilMILASISAHGATGTWLDEILELGVPLVLFVGLWWWSTRKDKKKRPKTRAAEPEPAKK*
Ga0134062_1077178423300010337Grasslands SoilMILASISAHGATGTWLDEILELGVPLVLFVGLWWWSTRKDKKKRPKTKAAEPAAAKK*
Ga0153984_112233923300011401Attine Ant Fungus GardensMILLSLSAHGATGTWLDEILELGLPLALFAGLWWWSTRKEKKKNKAKAAAEPQAAKK*
Ga0120146_105578723300011992PermafrostMIYASVSAHGATGTWLDEILELGVPLVLFIGLWWWSTRKEKKKAKPTPDKAEAKK*
Ga0120148_102057623300011999PermafrostMIYASVSAHGATGTWLDEILELGVPLVLFIGLWWWSTRKEKRKAKPTPDKAEAKK*
Ga0137388_1052856913300012189Vadose Zone SoilMIFASVSAHGATGTWLDEILELGVPLVLFIGLWWWSTRKERNKGKSTRGAPAPA
Ga0137364_10002813103300012198Vadose Zone SoilMIFASVSAHGATGTWLDEMLELGVPLVLFIGLWWWSTRKEKKKAKAATPKAEAKK*
Ga0137382_1030073723300012200Vadose Zone SoilMIFASVSAHGATGTWLDEILELGVPLVLFIGLWWWSTRKEKKKAKAATPKAEAKK*
Ga0137382_1038703123300012200Vadose Zone SoilMIFASVSAHGATGTWLDEILELGVPLVLFIGLWWWSTRKEKKKAKPAPEAEAKK*
Ga0137363_1137686013300012202Vadose Zone SoilMIIAAVSAHGVTGTWLDEILELGVPLLLFIGLWWWSTRKEKKKAKSIPKADVKK*
Ga0137399_1010688743300012203Vadose Zone SoilSTHGATGTWLDEILELGVPLVLFVGLWWWSTRKEKKKAKVKPAVKPDLEK*
Ga0137399_1049059713300012203Vadose Zone SoilMIFASVLAHGVTGTWLDEIVELGVPLVLFIGLWWWSTRKEKKKAKATPKTEPKK*
Ga0137399_1051660923300012203Vadose Zone SoilMIFASVSAHGVTGTWLDEILELGVPLVLFIGLWWWSTRKEKKKAKSTPETETKE*
Ga0137399_1090621313300012203Vadose Zone SoilMIFAAVSAHGATGTWLDEILELGVPLVLFVGLWWWSTRKEKKKA
Ga0137399_1116935223300012203Vadose Zone SoilMIYASVSAHGATGTWLDEILELGVPLLLFIGLWWWSTRKEKKKAKSAPRPNLKK*
Ga0137376_1033463523300012208Vadose Zone SoilMIIASVSAHGATGTWLDEMLELGVPLVLFIGLWWWSTRKEKKKAKAATPKAEAKK*
Ga0137376_1168939123300012208Vadose Zone SoilMILASISAHGATGTWLDEILELGVPLLLFVGLWWWSTRKDKKKRPKTKTAEPEPAKK*
Ga0137397_1006514933300012685Vadose Zone SoilMIFASVSAHGATGTWLDEILELGVPLVLFIGLWWWSTRKEKKKAKSTPETEPKE*
Ga0137396_1022876423300012918Vadose Zone SoilMIFASVSTHGATGTWLDEILELGVPLALFVGLWWWSTRKEKKKAKVKPAVKPDLEK*
Ga0137394_1007300223300012922Vadose Zone SoilMIFASVSAHGATGTWLDEILELGVPLVLFIGLWWWSTRKEKKKAKATPETEPKE*
Ga0137394_1085933223300012922Vadose Zone SoilMIVASVSAHGVTGTWLDEILELGVPLVLFIGLWWWSTRKEKKKAKPTPKADLKK*
Ga0137419_1000207173300012925Vadose Zone SoilMIFASVSAHGVTGTWLDEILELGVPLVLFIGLWWWSTRKEKKKAKSTPETEPKE*
Ga0137416_1160100313300012927Vadose Zone SoilMIYASVSAHGATGTWLDEILELGVPLLLFIGLWWWSTRKEKKKAKSTPKADLKK*
Ga0137407_1129630513300012930Vadose Zone SoilMIFASVSTHGATGTWLDEILELGVPLVLFIGLWWWSTRKEKKKAKSTPEVEAKK*
Ga0137418_1021302423300015241Vadose Zone SoilMIFASVSTHGATGTWLDEILELGVPLVLFIGLWWWSTRKEKKKAKSAPRPNLKK*
Ga0134112_1021359313300017656Grasslands SoilMTFASLATHGVTGTWLDEILELGVPLALFLGLWWWSTRKEKRKAKAKAPEPGTEK
Ga0184610_119010023300017997Groundwater SedimentMIFASVSAHGVTGTWLDEILELGVPLVLFIGLWWWSTRKEKKKAKSTPETEPKK
Ga0184605_1005233233300018027Groundwater SedimentMIFASVSMHGVTGTWLDEILELGVPLVLFIGLWWWSTRKEKQKAKGKPLGKPEPEK
Ga0184605_1005742623300018027Groundwater SedimentMILASVSAHGVTGTWLDEILELGVPLVLFIGLWWWSTRKEKKKAKSTPKTLPKE
Ga0184605_1011629823300018027Groundwater SedimentMIFASVSAHGVTGTWLDEILELGVPLVLFIGLWWWSTRKQKKKGKSGPNGGVKK
Ga0184608_1000080593300018028Groundwater SedimentMIFASVSAHGVTGTWLDEILELGVPLVLFIGLWWWSTRKEKKKAKSTPKTEPKE
Ga0184608_1010906823300018028Groundwater SedimentMIFASVSAHGATGTWLDEILELGVPLILFIGLWWWSTRKEKKKAKSTEADAKK
Ga0184608_1030427223300018028Groundwater SedimentGTWLDEILELGVPLVLFVGLWWWSTRKEKKKAKSSTRGAPTPEAEAKK
Ga0184619_1041964413300018061Groundwater SedimentMIFASVSMHGVTGTWLDEILELGVPLILFIGLWWWSTRKEKQKAKAKPLGKPEPEK
Ga0066655_1021297523300018431Grasslands SoilMIFASVSAHGATGTWLDEILELGVPLFLFIGLWWWSTRKGKKKAKSAPASEPDA
Ga0066667_1012253833300018433Grasslands SoilMIYASVSAHGATGTWFDEILELGVPLVLFIGLWWWSTRKEKKKAKTAPKADVKK
Ga0066667_1108334013300018433Grasslands SoilMIFASVSTHGATGTWLDEALELGVPLLLFIGLWWWSTRKEKQRTKAKPVEEAEPPK
Ga0066662_1049042123300018468Grasslands SoilMIFASVSAHGATGTWLDEILELGVPLVLFVGLWWWSTRKEKKKAKPPPSADAKK
Ga0066662_1079093923300018468Grasslands SoilMIFASVSTHGATGTWLDEILELGVPLLLFIGLWWWSTRKEKKARVKPAVKPEIEK
Ga0066662_1081959533300018468Grasslands SoilVTGTWLDEILELGVPLALFLGLWWWSTRKEKRKAKAKSAEPETEK
Ga0066662_1162925513300018468Grasslands SoilMTFASFATHGVTGTWLDEIIELGLPLALFLGLWWWSTRKEKRKAKAKSA
Ga0066669_1008270723300018482Grasslands SoilMIIASVSAHGATGTWLDEILELGVPLVLFIGLWWWSTRKEKKKAKAATPKAEAKK
Ga0066669_1051033323300018482Grasslands SoilMIFASVSAHGATGTWLDEILELGVPLVLFLGLWWWSTRKEKKKAKAATPKAEAKK
Ga0193747_100060253300019885SoilMIFASVSAHGATGTWLDEILELGVPLILFIGLWWWSTRKEKKKAKAATPKAEAKK
Ga0193747_102058633300019885SoilMIFASVSAHGATGTWLDEILELGVPLVLFVGLWWWSTRKEKKKAKPTPKVEAKK
Ga0193735_101037543300020006SoilTGTWLDEILELGVPLILFIGLWWWSTRKEKKKAKAATPKAEAKK
Ga0193721_103640323300020018SoilMIFASISAHGATGTWLDEILELGVPLVLFIGLWWWSTRKEKKKAKAATPKAEAKK
Ga0193733_111189623300020022SoilMIFASVSAHGATGTWLDEILELGVPLVLFIGLWWWSTRKEKKKAKAATPKAEAKK
Ga0210381_1001486323300021078Groundwater SedimentMIFASVSTHGATGTWLDEILELGVPLILFIGLWWWSTRKEKKKAKSTEADAKK
Ga0222623_1038891923300022694Groundwater SedimentMIFASVSTHGVTGTWLDEILELGVPLVLFIALWWWSTRKQKQKAKAKPLGKPEPEK
Ga0222622_1019087823300022756Groundwater SedimentMIFASVSAHGATGTWLDEILELGVPLVLFIGLWWWSTRKEKKKAKSTPKTEPKE
Ga0222622_1068771023300022756Groundwater SedimentMIFASVSAHGATGTWLDEILELGVPLILFIGLWWWSTRKEKKKAKSTEVDAKK
Ga0207684_1022649023300025910Corn, Switchgrass And Miscanthus RhizosphereMIFASVSAHGATGTWLDEILELGVPLVLFVGLWWWSTRKEKKKAKSTSKADAKK
Ga0207684_1042381023300025910Corn, Switchgrass And Miscanthus RhizosphereMIYASVSAHGATGTWLDEILELGVPLVLFIGLWWWSTRKEKKKAKPAPKPDAEK
Ga0209235_114792723300026296Grasslands SoilMTFASLATHGVTGTWLDEILELGVPLALFLGLWWWSTRKEKRKAKAKSAEPETEK
Ga0209235_128794323300026296Grasslands SoilMIFASVSAHGATGTWLDEILELGVPLVLFVGLWWWSTRKEKKKAKPTPNADAKK
Ga0209027_105209813300026300Grasslands SoilMIFASVSAHGATGTWLDEILELGVPLVLFIGLWWWSTRKEKKKAKSTPKADLKK
Ga0209471_113374523300026318SoilMIFASVSAHGATGTWLDEILELGVPLVLFVGLWWWSTRKEKKKAKPPPSADAKR
Ga0209131_136732813300026320Grasslands SoilMIFASVSTHGATGTWLDEILELGVPLVLFIGLWWWSTRKEKKKAK
Ga0209687_106061813300026322SoilMIFASVSAHGATGNWLDEILELGVPLVLFIGLWWWSTRKEKKKAKSTGRA
Ga0209266_106930723300026327SoilMIFASVSAHGATGTWLDEILELGVPLVLFIGLWWWSTRKEKKKAKSG
Ga0209375_118653323300026329SoilMILASISTHGATGTWLDEILELGVPLALFVGLWWWSTRKDKKKRPKTRAAEPEPAKK
Ga0209158_105877823300026333SoilMIFASVSAHGATGTWLDEILELGVPLVLFIGLWWWSTRKKKKKAKSAP
Ga0209804_131933313300026335SoilRRIPMIFASVSAHGATGTWLDEILELGVPLVLFVGLWWWSTRKEKKKAKPPPSADAKK
Ga0209808_100423443300026523SoilMIYASVSAHGATGTWLDEILELGVPLVLFIGLWWWSTRKEKKKAKTAPKADVKK
Ga0209690_101422323300026524SoilMIFASVSTHGATGTWLDEALELGVPFLLFIGLWWWSTRKEKQRTKAKPVEEAEPPK
Ga0209805_108808723300026542SoilMIFASVSTHGATGTWLDEILELGVPLVLFIGLWWWSTRKGKKKAKSAPASEPDAKK
Ga0209805_137930923300026542SoilMILASISAHGATGTWLDEILELGVPLALFVGLWWWSTRKDKKKRPKTKAAEPAAAKK
Ga0209577_1024661023300026552SoilVIFLSLSAHGATGTWLDEILELGVPLVLFVGLWWWSTRKDKKKRPKTKAAEPAAAK
Ga0209220_117552623300027587Forest SoilMIFASVSTHGATGTWLDEILELGVPLVLFIGLWWWSTRKEKKKAKSTPKADAKK
Ga0137415_1007308753300028536Vadose Zone SoilMIFASVSAHGVTGTWLDEILELGVPLVLFIGLWWWSTRKEKKKAKSTPETEPKE
Ga0137415_1035565413300028536Vadose Zone SoilMIFASVSTHGATGTWLDEILELGVPLLLFIGLWWWSTRKEKKKAKSAPRPTLKK
Ga0137415_1119817113300028536Vadose Zone SoilMIYASVSAHGATGTWLDEILELGVPLLLFIGLWWWSTRKEKKKAKSAPRPNLKK
Ga0307290_1005994313300028791SoilSAHGATGTWLDEILELGVPLILFIGLWWWSTRKEKKKAKSTEADAKK
Ga0307284_1007637813300028799SoilMIFASVSTHGATGTWLDEILELGVPLVLFVGLWWWSTRKEKKKVKPPKPEADAKK
Ga0307277_1000546153300028881SoilMIFASISAHGATGTWLDEILELGVPLVLFIGLWWWSTRKEKKKAKSASEADVKK
Ga0307308_1027537123300028884SoilMILASVSAHGVTGTWLDEILELGVPLVLFIGLWWWSTRKEKKKSKSTAGAP
Ga0307469_1065488023300031720Hardwood Forest SoilMIFASVSAHGATGTWLDEILELGVPLVLFIGLWWWSTRKEKKKAKS
Ga0307469_1139289623300031720Hardwood Forest SoilMIFASVSTHGVTGTWLDEILELGVPLVLFIGLWWWSTRKEKRKAKAKPLGKPEPEK
Ga0307473_1006241423300031820Hardwood Forest SoilMILLSLSAHGATGTWLDEILELGLPLALFAGLWWWSTRKEKKKNKGKAAAEPEAAKK
Ga0307471_10039933843300032180Hardwood Forest SoilMIIASVSAHGVTGTWLDEILELGVPLVLFIGLWWWSTRKEKKKAKSTPKADLKK
Ga0307471_10101710923300032180Hardwood Forest SoilMILLSLSAHGATGTWLDEILELGLPLALFAGLWWWSTRKEKKKNKAKAAAEPQAAKK

 ⦗Top⦘


Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.