Metagenome Family F063520

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F063520
Family Type	Metagenome
Number of Sequences	129
Average Sequence Length	88 residues
Representative Sequence	YSVNVSGSNLTAETFLDVRFISPGSNESAVVLNWQKGLVARHDVPAGTASGVWAINGVRAHQIETDHTDSFVPVSATITVSP
Number of Associated Samples	73
Number of Associated Scaffolds	129

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	5.60 %
% of genes near scaffold ends (potentially truncated)	89.92 %
% of genes from short scaffolds (< 2000 bps)	92.25 %
Associated GOLD sequencing projects	70
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.69

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Bacteria (65.891 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil (24.031 % of family members)
Environment Ontology (ENVO)	Unclassified (34.884 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (58.915 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 0.00% β-sheet: 30.91% Coil/Unstructured: 69.09%
Feature Viewer

Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.69
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.69
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 129 Family Scaffolds
PF13418	Kelch_4	3.10
PF17164	DUF5122	1.55
PF07676	PD40	1.55
PF12704	MacB_PCD	1.55
PF07690	MFS_1	1.55
PF13442	Cytochrome_CBB3	1.55
PF03693	ParD_antitoxin	0.78
PF00501	AMP-binding	0.78
PF00196	GerE	0.78
PF00034	Cytochrom_C	0.78
PF01451	LMWPc	0.78
PF03712	Cu2_monoox_C	0.78
PF13620	CarboxypepD_reg	0.78
PF13302	Acetyltransf_3	0.78
PF00665	rve	0.78
PF04986	Y2_Tnp	0.78
PF07080	DUF1348	0.78
PF12543	DUF3738	0.78
PF00239	Resolvase	0.78
PF02776	TPP_enzyme_N	0.78
PF00296	Bac_luciferase	0.78
PF00593	TonB_dep_Rec	0.78
PF00529	CusB_dom_1	0.78
PF13964	Kelch_6	0.78
PF12840	HTH_20	0.78
PF03972	MmgE_PrpD	0.78
PF00069	Pkinase	0.78
PF13531	SBP_bac_11	0.78
PF01068	DNA_ligase_A_M	0.78
PF02577	BFN_dom	0.78
PF12120	Arr-ms	0.78
PF13378	MR_MLE_C	0.78
PF00326	Peptidase_S9	0.78
PF07366	SnoaL	0.78

COG ID	Name	Functional Category	% Frequency in 129 Family Scaffolds
COG0515	Serine/threonine protein kinase	Signal transduction mechanisms [T]	3.10
COG1259	Bifunctional DNase/RNase	General function prediction only [R]	0.78
COG1423	ATP-dependent RNA circularization protein, DNA/RNA ligase (PAB1020) family	Replication, recombination and repair [L]	0.78
COG1793	ATP-dependent DNA ligase	Replication, recombination and repair [L]	0.78
COG1961	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	Replication, recombination and repair [L]	0.78
COG2079	2-methylcitrate dehydratase PrpD	Carbohydrate transport and metabolism [G]	0.78
COG2141	Flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase SsuD and methylene tetrahydromethanopterin reductase)	Coenzyme transport and metabolism [H]	0.78
COG2452	Predicted site-specific integrase-resolvase	Mobilome: prophages, transposons [X]	0.78
COG2801	Transposase InsO and inactivated derivatives	Mobilome: prophages, transposons [X]	0.78
COG2826	Transposase and inactivated derivatives, IS30 family	Mobilome: prophages, transposons [X]	0.78
COG3316	Transposase (or an inactivated derivative), DDE domain	Mobilome: prophages, transposons [X]	0.78
COG3558	Uncharacterized conserved protein, nuclear transport factor 2 (NTF2) superfamily	Function unknown [S]	0.78
COG3609	Transcriptional regulator, contains Arc/MetJ-type RHH (ribbon-helix-helix) DNA-binding domain	Transcription [K]	0.78
COG4584	Transposase	Mobilome: prophages, transposons [X]	0.78

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	66.67 %
Unclassified	root	N/A	33.33 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	66.67 %
Unclassified	root	N/A	33.33 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	65.89 %
Unclassified	root	N/A	33.33 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	0.78 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	51.94 %
Unclassified	root	N/A	33.33 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	4.65 %
DPANN group	clade	All Organisms → cellular organisms → Archaea → DPANN group	0.78 %

Name	Rank	Taxonomy	Distribution
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	43.41 %
Unclassified	root	N/A	33.33 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1.55 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	1.55 %
Candidatus Woesearchaeota	phylum	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Woesearchaeota	0.78 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.78 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	0.78 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	43.41 %
Unclassified	root	N/A	33.33 %
Bryobacterales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	0.78 %
Candidatus Woesearchaeota archaeon	species	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Woesearchaeota → Candidatus Woesearchaeota archaeon	0.78 %
Candidatus Acidoferrales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales	0.78 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.78 %
Oceanospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Oceanospirillales	0.78 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.78 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	43.41 %
Unclassified	root	N/A	33.33 %
Solibacteraceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae	0.78 %
Oceanospirillaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Oceanospirillales → Oceanospirillaceae	0.78 %
Syntrophobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales	0.78 %
Candidatus Acidoferrum	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum	0.78 %
Candidatus Woesearchaeota archaeon	species	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Woesearchaeota → Candidatus Woesearchaeota archaeon	0.78 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.78 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	43.41 %
Unclassified	root	N/A	33.33 %
Candidatus Solibacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter	0.78 %
Candidatus Acidoferrum panamensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	0.78 %
Syntrophobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophobacteraceae	0.78 %
Marinomonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Oceanospirillales → Oceanospirillaceae → Marinomonas	0.78 %
Candidatus Woesearchaeota archaeon	species	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Woesearchaeota → Candidatus Woesearchaeota archaeon	0.78 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.78 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	43.41 %
Unclassified	root	N/A	33.33 %
Candidatus Solibacter usitatus	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	0.78 %
Marinomonas profundimaris	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Oceanospirillales → Oceanospirillaceae → Marinomonas → Marinomonas profundimaris	0.78 %
Syntrophobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophobacteraceae → Syntrophobacter	0.78 %
Candidatus Acidoferrum panamensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	0.78 %
Candidatus Woesearchaeota archaeon	species	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Woesearchaeota → Candidatus Woesearchaeota archaeon	0.78 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.78 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	43.41 %
Unclassified	root	N/A	33.33 %
Syntrophobacter fumaroxidans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophobacteraceae → Syntrophobacter → Syntrophobacter fumaroxidans	0.78 %
Candidatus Solibacter usitatus	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	0.78 %
Marinomonas profundimaris	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Oceanospirillales → Oceanospirillaceae → Marinomonas → Marinomonas profundimaris	0.78 %
Candidatus Acidoferrum panamensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	0.78 %
Candidatus Woesearchaeota archaeon	species	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Woesearchaeota → Candidatus Woesearchaeota archaeon	0.78 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.78 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	43.41 %
Unclassified	root	N/A	33.33 %
Syntrophobacter fumaroxidans MPOB	strain	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophobacteraceae → Syntrophobacter → Syntrophobacter fumaroxidans → Syntrophobacter fumaroxidans MPOB	0.78 %
Candidatus Solibacter usitatus	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	0.78 %
Marinomonas profundimaris	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Oceanospirillales → Oceanospirillaceae → Marinomonas → Marinomonas profundimaris	0.78 %
Candidatus Acidoferrum panamensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	0.78 %
Candidatus Woesearchaeota archaeon	species	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Woesearchaeota → Candidatus Woesearchaeota archaeon	0.78 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.78 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2170459017\|G14TP7Y01BHLHS	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	575	Open in IMG/M
3300000955\|JGI1027J12803_100314476	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	573	Open in IMG/M
3300000955\|JGI1027J12803_100688278	Not Available	539	Open in IMG/M
3300004157\|Ga0062590_102351884	All Organisms → cellular organisms → Bacteria	561	Open in IMG/M
3300004463\|Ga0063356_100673205	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	1416	Open in IMG/M
3300004463\|Ga0063356_100863120	All Organisms → cellular organisms → Bacteria	1272	Open in IMG/M
3300004633\|Ga0066395_10407172	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	768	Open in IMG/M
3300004643\|Ga0062591_101370966	Not Available	699	Open in IMG/M
3300005294\|Ga0065705_11140941	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Oceanospirillales → Oceanospirillaceae → Marinomonas → Marinomonas profundimaris	514	Open in IMG/M
3300005332\|Ga0066388_100387052	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2044	Open in IMG/M
3300005332\|Ga0066388_102848389	Not Available	884	Open in IMG/M
3300005332\|Ga0066388_105579250	Not Available	637	Open in IMG/M
3300005332\|Ga0066388_106122806	Not Available	607	Open in IMG/M
3300005332\|Ga0066388_107875146	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Woesearchaeota → Candidatus Woesearchaeota archaeon	533	Open in IMG/M
3300005446\|Ga0066686_10963631	Not Available	556	Open in IMG/M
3300005586\|Ga0066691_10826016	All Organisms → cellular organisms → Bacteria	546	Open in IMG/M
3300005618\|Ga0068864_102553785	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	517	Open in IMG/M
3300005713\|Ga0066905_102030477	All Organisms → cellular organisms → Bacteria → Acidobacteria	534	Open in IMG/M
3300005713\|Ga0066905_102260815	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	508	Open in IMG/M
3300005764\|Ga0066903_107270120	Not Available	573	Open in IMG/M
3300005764\|Ga0066903_107808892	Not Available	550	Open in IMG/M
3300006796\|Ga0066665_10130593	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1884	Open in IMG/M
3300006796\|Ga0066665_11517174	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	524	Open in IMG/M
3300006844\|Ga0075428_100701517	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1078	Open in IMG/M
3300006852\|Ga0075433_10744589	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	857	Open in IMG/M
3300006854\|Ga0075425_100292863	All Organisms → cellular organisms → Bacteria	1873	Open in IMG/M
3300006854\|Ga0075425_100876514	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1027	Open in IMG/M
3300006854\|Ga0075425_101050351	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	929	Open in IMG/M
3300006871\|Ga0075434_100180388	All Organisms → cellular organisms → Bacteria → Proteobacteria	2131	Open in IMG/M
3300006871\|Ga0075434_100708405	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1024	Open in IMG/M
3300006871\|Ga0075434_102098938	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	570	Open in IMG/M
3300006871\|Ga0075434_102658386	Not Available	500	Open in IMG/M
3300006880\|Ga0075429_101869807	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	520	Open in IMG/M
3300006903\|Ga0075426_10687726	All Organisms → cellular organisms → Bacteria	767	Open in IMG/M
3300006904\|Ga0075424_101099477	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	847	Open in IMG/M
3300006904\|Ga0075424_101110654	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	842	Open in IMG/M
3300006904\|Ga0075424_102170496	All Organisms → cellular organisms → Bacteria → Acidobacteria	585	Open in IMG/M
3300006914\|Ga0075436_100079896	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2266	Open in IMG/M
3300006954\|Ga0079219_10939996	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	706	Open in IMG/M
3300007076\|Ga0075435_101186969	Not Available	668	Open in IMG/M
3300009012\|Ga0066710_103665598	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	578	Open in IMG/M
3300009012\|Ga0066710_104007684	Not Available	551	Open in IMG/M
3300009012\|Ga0066710_104304276	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	532	Open in IMG/M
3300009094\|Ga0111539_10400277	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1599	Open in IMG/M
3300009137\|Ga0066709_100223874	All Organisms → cellular organisms → Bacteria	2494	Open in IMG/M
3300009147\|Ga0114129_10483653	All Organisms → cellular organisms → Bacteria → Acidobacteria	1619	Open in IMG/M
3300009147\|Ga0114129_11138856	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	975	Open in IMG/M
3300009156\|Ga0111538_10445177	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1642	Open in IMG/M
3300009156\|Ga0111538_11794773	All Organisms → cellular organisms → Bacteria	772	Open in IMG/M
3300009156\|Ga0111538_12692183	Not Available	623	Open in IMG/M
3300009162\|Ga0075423_10593897	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1167	Open in IMG/M
3300009162\|Ga0075423_13034822	Not Available	514	Open in IMG/M
3300009176\|Ga0105242_13245100	Not Available	505	Open in IMG/M
3300010043\|Ga0126380_12063074	Not Available	523	Open in IMG/M
3300010046\|Ga0126384_11843776	Not Available	575	Open in IMG/M
3300010046\|Ga0126384_12029471	All Organisms → cellular organisms → Bacteria → Acidobacteria	550	Open in IMG/M
3300010047\|Ga0126382_10545493	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	942	Open in IMG/M
3300010047\|Ga0126382_10854173	Not Available	782	Open in IMG/M
3300010047\|Ga0126382_11487252	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	622	Open in IMG/M
3300010047\|Ga0126382_11627116	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	600	Open in IMG/M
3300010047\|Ga0126382_11776790	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	579	Open in IMG/M
3300010047\|Ga0126382_12464985	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	506	Open in IMG/M
3300010048\|Ga0126373_13285733	All Organisms → cellular organisms → Bacteria → Acidobacteria	503	Open in IMG/M
3300010323\|Ga0134086_10431676	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	535	Open in IMG/M
3300010358\|Ga0126370_11978796	Not Available	569	Open in IMG/M
3300010359\|Ga0126376_11977605	Not Available	624	Open in IMG/M
3300010362\|Ga0126377_10428448	All Organisms → cellular organisms → Bacteria → Acidobacteria	1341	Open in IMG/M
3300010362\|Ga0126377_11503635	Not Available	747	Open in IMG/M
3300010362\|Ga0126377_11719323	All Organisms → cellular organisms → Bacteria → Acidobacteria	702	Open in IMG/M
3300010362\|Ga0126377_13155357	Not Available	532	Open in IMG/M
3300010366\|Ga0126379_10987899	All Organisms → cellular organisms → Bacteria	946	Open in IMG/M
3300010366\|Ga0126379_11328737	Not Available	825	Open in IMG/M
3300010398\|Ga0126383_11320011	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	811	Open in IMG/M
3300010398\|Ga0126383_12331168	Not Available	621	Open in IMG/M
3300010400\|Ga0134122_12419847	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	573	Open in IMG/M
3300011119\|Ga0105246_11481804	Not Available	636	Open in IMG/M
3300012509\|Ga0157334_1071903	Not Available	522	Open in IMG/M
3300012948\|Ga0126375_11303201	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	610	Open in IMG/M
3300012948\|Ga0126375_11632566	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophobacteraceae → Syntrophobacter → Syntrophobacter fumaroxidans → Syntrophobacter fumaroxidans MPOB	556	Open in IMG/M
3300012948\|Ga0126375_11929815	Not Available	519	Open in IMG/M
3300012958\|Ga0164299_11401939	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	540	Open in IMG/M
3300012971\|Ga0126369_11347851	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	803	Open in IMG/M
3300012971\|Ga0126369_11475782	All Organisms → cellular organisms → Bacteria	770	Open in IMG/M
3300012971\|Ga0126369_12820915	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	569	Open in IMG/M
3300013306\|Ga0163162_10779888	All Organisms → cellular organisms → Bacteria	1074	Open in IMG/M
3300014326\|Ga0157380_13166792	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	525	Open in IMG/M
3300015371\|Ga0132258_10247976	All Organisms → cellular organisms → Bacteria → Acidobacteria	4351	Open in IMG/M
3300015371\|Ga0132258_10725399	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	2503	Open in IMG/M
3300015371\|Ga0132258_11617595	All Organisms → cellular organisms → Bacteria → Proteobacteria	1635	Open in IMG/M
3300015371\|Ga0132258_11810469	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	1538	Open in IMG/M
3300015372\|Ga0132256_102643522	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	602	Open in IMG/M
3300015372\|Ga0132256_102651651	Not Available	601	Open in IMG/M
3300015373\|Ga0132257_102100985	Not Available	730	Open in IMG/M
3300015373\|Ga0132257_102767664	Not Available	639	Open in IMG/M
3300015374\|Ga0132255_102929963	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	729	Open in IMG/M
3300015374\|Ga0132255_102999906	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	721	Open in IMG/M
3300015374\|Ga0132255_103740328	Not Available	647	Open in IMG/M
3300015374\|Ga0132255_104182266	Not Available	612	Open in IMG/M
3300015374\|Ga0132255_105792376	Not Available	523	Open in IMG/M
3300016319\|Ga0182033_11233441	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	671	Open in IMG/M
3300016341\|Ga0182035_11347291	Not Available	640	Open in IMG/M
3300016341\|Ga0182035_11402609	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	627	Open in IMG/M
3300016357\|Ga0182032_11274643	All Organisms → cellular organisms → Bacteria → Acidobacteria	634	Open in IMG/M
3300016404\|Ga0182037_10871023	All Organisms → cellular organisms → Bacteria	780	Open in IMG/M
3300016422\|Ga0182039_10161370	Not Available	1749	Open in IMG/M
3300016445\|Ga0182038_11298476	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	650	Open in IMG/M
3300018064\|Ga0187773_10778976	Not Available	605	Open in IMG/M
3300018064\|Ga0187773_11160966	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	517	Open in IMG/M
3300021560\|Ga0126371_11443801	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	818	Open in IMG/M
3300021560\|Ga0126371_13157235	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	557	Open in IMG/M
3300021560\|Ga0126371_13228262	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	551	Open in IMG/M
3300024232\|Ga0247664_1050375	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	964	Open in IMG/M
3300026322\|Ga0209687_1250904	All Organisms → cellular organisms → Bacteria	549	Open in IMG/M
3300027909\|Ga0209382_11163621	Not Available	792	Open in IMG/M
3300031719\|Ga0306917_11354501	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	550	Open in IMG/M
3300031719\|Ga0306917_11439049	Not Available	531	Open in IMG/M
3300031820\|Ga0307473_10414123	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	887	Open in IMG/M
3300031820\|Ga0307473_11543627	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	505	Open in IMG/M
3300031942\|Ga0310916_10957152	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	716	Open in IMG/M
3300031954\|Ga0306926_12582033	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	555	Open in IMG/M
3300032017\|Ga0310899_10659297	Not Available	528	Open in IMG/M
3300032211\|Ga0310896_10558669	Not Available	634	Open in IMG/M
3300032261\|Ga0306920_102972898	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	641	Open in IMG/M
3300032261\|Ga0306920_103616694	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	569	Open in IMG/M
3300032261\|Ga0306920_103712859	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	560	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	64.34%
Host-Associated	Host-Associated	34.88%
Engineered	Engineered	0.78%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	64.34%
Plants	Host-Associated → Plants	34.88%
Solid Waste	Engineered → Solid Waste	0.78%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	64.34%
Rhizosphere	Host-Associated → Plants → Rhizosphere	23.26%
Rhizoplane	Host-Associated → Plants → Rhizoplane	11.63%
Grass	Engineered → Solid Waste → Grass	0.78%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	54.26%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	21.71%
Loam	Environmental → Terrestrial → Soil → Loam	8.53%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	8.53%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	3.10%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	1.55%
Soil	Host-Associated → Plants → Rhizosphere → Soil	1.55%
Composting	Engineered → Solid Waste → Grass → Composting	0.78%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	28.68%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	21.71%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	13.18%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	8.53%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	8.53%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	8.53%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	3.10%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	2.33%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	1.55%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	1.55%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	1.55%
Unclassified	Engineered → Solid Waste → Grass → Composting → Unclassified	0.78%

Habitat	Taxonomy	Distribution
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	24.03%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	19.38%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	10.08%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	8.53%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	8.53%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	5.43%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	3.10%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.55%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	1.55%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.55%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.55%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.55%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	1.55%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	1.55%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	1.55%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.55%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	1.55%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.78%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.78%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.78%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.78%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.78%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.78%
Switchgrass, Maize And Mischanthus Litter	Engineered → Solid Waste → Grass → Composting → Unclassified → Switchgrass, Maize And Mischanthus Litter	0.78%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2170459017	Litter degradation ZMR4	Engineered	Open in IMG/M
3300000955	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300004157	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300004643	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3	Environmental	Open in IMG/M
3300005294	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk Soil	Environmental	Open in IMG/M
3300005295	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005446	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135	Environmental	Open in IMG/M
3300005586	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140	Environmental	Open in IMG/M
3300005618	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2	Host-Associated	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006880	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3	Host-Associated	Open in IMG/M
3300006903	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300006914	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5	Host-Associated	Open in IMG/M
3300006954	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control	Environmental	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010323	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300011119	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG	Host-Associated	Open in IMG/M
3300012509	Unplanted soil (control) microbial communities from North Carolina - M.Soil.8.old.080610_6	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300014326	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG	Host-Associated	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300018064	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP05_10_MG	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300024232	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK05	Environmental	Open in IMG/M
3300026322	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_136 (SPAdes)	Environmental	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300032017	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D4	Environmental	Open in IMG/M
3300032211	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D1	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
4ZMR_04386320	2170459017	Switchgrass, Maize And Mischanthus Litter	YSVSVSGSNLTSETFLDVRFISPGSNASNVVLNWQRGVAASHDVVAGTASGNWAIIGVRAHEIETDHTSSFVPVSATITVSP
JGI1027J12803_1003144762	3300000955	Soil	VGSSFSANFSGSNLTSQTFFDVRFTSPGNNNSDVVLNWQRGLEVSHDVAVGTVAGSYTIIGVRAHEIETDHTGIFFPVSATITVSP*
JGI1027J12803_1006882782	3300000955	Soil	SVSAELYTPSILMPIPVVETVRFDRSVVPAGASYSVDVSGSYLTSEMFFDVRFISPETTEFAVVLNWQRGFTGEHDLPAGTTLGNWTINGVRAHEIETDHTGNFFPVSATITVSR*
Ga0062590_1023518842	3300004157	Soil	SLNSQTFFDVRFSFPGSTASDVVLNWQKGLTASHGVATGTAQGTWTITGVRPHQVEAEHTGDFLPVLATISVAQ*
Ga0063356_1006732051	3300004463	Arabidopsis Thaliana Rhizosphere	LETFFDVRFVSPGSTSSVVVLNWQRGIAASHGVLAGTTSGRWTITAVRPHEIETDHTGNFFPVSATITVSP*
Ga0063356_1008631201	3300004463	Arabidopsis Thaliana Rhizosphere	SAPAVVAPGASYSVEVSGSNLTSQMFFDVRFTDPRSNDSAVVLNWQKGLTASHEVPAGIAPGGWTITGVRAHEIETDHTGTFVPVSATIGVSR*
Ga0066395_104071722	3300004633	Tropical Forest Soil	SLLVPAQIITDLRFDRTSVVAGSSYSVNVSGSNLTPQTFFDVRFTSPGSNAWNVAPNWQRGVAVSHDVPVGLAPGSWTINGVRAHEVETDHTGIFFPVSATITVSP*
Ga0062591_1013709661	3300004643	Soil	MPIPVVGAVRFDRMVVPAGSSYSVDLSGSNLTPEMFFDVRLTSPESNESVVALNWQNGLAENHEVPAGIASGSWKITGVRAHKIETDDTGIFFP
Ga0065705_111409411	3300005294	Switchgrass Rhizosphere	VIGDLHFDRTNVAAGSTYSVNVSGSNLTAETFFDVRFTRPGSNDSDVALNWQKGLSGRHGIPNDTASGIWKITGVRAHEIETDHTDSFVPVSATITVSP*
Ga0065707_111299391	3300005295	Switchgrass Rhizosphere	LSAVHQHPTVLSNQSAVVLNWQKGLVVRHDVPAGIASGVWAINGVRAHQIETDHTGSFASVSATITVSP*
Ga0066388_1003870521	3300005332	Tropical Forest Soil	RASVATGSFYSVNFSGPNLIDEMFFDVRFTAPGSKESVVVLNWQKGLLANHSVPAGTTSGIWTINGVRAHKIETDYSGNFVPVSAKITVSP*
Ga0066388_1028483891	3300005332	Tropical Forest Soil	VGAVRFDRMVVPAGSSYSVDLSGSNLAPDMFFDVRFTSPENNESAVALNWQKGLAENHEVPAGIASGSWKITGVRAHKIETNHTGIFFPVSATLTVSP*
Ga0066388_1055792501	3300005332	Tropical Forest Soil	NLPMDALFDVRFIIPGTNESVVALNWQRGLAQRHDVPAGVTPGAWAINGVRPHQEEADHTGDFIPVSATITVVELPWQ*
Ga0066388_1061228061	3300005332	Tropical Forest Soil	VFVGAFYSADVSGSNLTSETFFDVRFVSPGSNESGVALNWQKGFVATHDVPAGTASGVWTINGVRAHQVETDHTGSFVPVSAKITVP*
Ga0066388_1078751462	3300005332	Tropical Forest Soil	VRFTAPGSNTSSVVLNWQKGLAASHAVAVGTPAGKWTITGVRAHQVEGDHSGDFVPVYATITVAP*
Ga0066686_109636311	3300005446	Soil	EMFFDVRFIGPGSNESAVVLNWQRGLAVKHDVPAGTPLGAWIINGVRAHEIETDHTGIFFPVSATITVSP*
Ga0066691_108260162	3300005586	Soil	ITAGTFFDVRFTSPGSNAFAVVLNWQRGLAASHDVPIGTASGNWTINGVRAHQIEADHTGGFVPVSATITVSPSN*
Ga0068864_1025537852	3300005618	Switchgrass Rhizosphere	RTNVAAGGSYAVTVSGSSLTPQTFFDVRFSAPGSGAASVVLNWQKGLVVSHNLPAGIAAGAWTITGVRAHELEADHTDSFVPVSATITVSR*
Ga0066905_1020304772	3300005713	Tropical Forest Soil	PAGSSYSVDLSGSSLTAKMFFDVRFISPESNESAVVLNWQKGLAASHEVPAGIAPGSWKIMGVRAHKIETDHTGNFSQVSATITVSP*
Ga0066905_1022608151	3300005713	Tropical Forest Soil	GSNLTPQTFFDVRFISPDSNESAVVLNWQRGLVANHDVPAGIASGNWTINGMRAHQVETDHTGGFFRVSATITVSP*
Ga0066903_1056433901	3300005764	Tropical Forest Soil	FTSPGSNESAVVLNWQRGLGARHDVPAGTASGMWAINGVRAHQIETDHTGNFVPASATITVFP*
Ga0066903_1072701202	3300005764	Tropical Forest Soil	TDLQFDRMNVAAGSSYSVKLSGSNLTSQTFFDVRFTSPGSNDSAVVLNWQRGLTANHDVAAGTPSGRWTINGVRAHEIQADHTGSLIPVSATITVSP*
Ga0066903_1078088922	3300005764	Tropical Forest Soil	DVRFTAPGSNDSDVALNWQKGVTANHSVPAGIRSGNWTINGVRVHQIETDHSGNFSPLSITITVSP*
Ga0066665_101305932	3300006796	Soil	VLAVRFLRNFSASVSGSDILTSQTFFDVRVTAPGSNASDVALNWQRGLAASHAVSVGTPAGNWTVTGVRAQQVEADHTGDFIPVNATITVAP*
Ga0066665_115171742	3300006796	Soil	GLAVVIANTSYSVNISGSGLTTETFFDVRFTDPESHTGVVLNWQRGLAASHGVPIGTASGNWTINGVRAHQIEEDHTSSFVPVSATITVSH*
Ga0075428_1007015171	3300006844	Populus Rhizosphere	SNLTPKMFFDVRFISPESSESAVALNWQRGLFASHDVPASIARGSWKITGVRAHEIETDHSGDFFSVSATITVSP*
Ga0075433_107445891	3300006852	Populus Rhizosphere	VALNWQKGLSENHAVIVGTAAGNWTITGVRAHQVEADHTGDFLPVFARITVLP*
Ga0075425_1002928631	3300006854	Populus Rhizosphere	PAGSSYSVGLSGSNLTPDMFFDVRFTSPENNESAVALTWQTGLVENHDVPAGLAPGNWKITGVRAHQIETDHTGIFFPASATITVSP*
Ga0075425_1008765141	3300006854	Populus Rhizosphere	DLRFDQTSVVAGSSYSLSVSGSNLTSETFLDVRFISPGSNESAVVLNWQRGLAASHDVAAGTASGTWTINGVRAHEIETDHTGDFVPVSATITVSP*
Ga0075425_1010503511	3300006854	Populus Rhizosphere	NVAAGSSYSVNLSGSNLTPQTFFDVRFTRPGSTESAVLLNWQRGLAASHAVAAGTTSGSWTINGVRPHEIETDHTGSFIPVSATITVSP*
Ga0075434_1001803881	3300006871	Populus Rhizosphere	GSNLTSQTFFDVRFTAPGSNASNVALNWQTGVASSHDVPPALALGNWTINGVRAHEVETDHTGIFFPVSATITVVP*
Ga0075434_1007084051	3300006871	Populus Rhizosphere	MSELYVPPLSVPAPFVAELRFDRSNVAAGSSFKVSFSGSSLAPQSFFDVRFSAPESNSYQVVLNWQKGVELSHSVPASTAPGMWTINGVRAHQMETDHTGSFNPVSAVITVSQ*
Ga0075434_1020989381	3300006871	Populus Rhizosphere	SVVAGSSYSLSVSGSNLTSETFLDVRFISPGSNESAVVLNWQRGLAASHDVAAGTASGTWTINGVRAHEIETDHTGDFVPVSATITVSRWI*
Ga0075434_1026583862	3300006871	Populus Rhizosphere	MVVPAGSSFSVDLSGSNLTTEMFFDVRFISPESNQSAVVLNWQKGLAASHEVPAGIAPGSWKIAGVRAHKIEANHTGIFFPVSAT
Ga0075429_1018698071	3300006880	Populus Rhizosphere	LYVPSVLAPTPVVTGMRFDRTTSVAGGSFSVSISGTNLTTQTFFDVRFTSPGTNESAVVLNWQQGFATSHDLATGIAAGRWTVIGVRAHEIETDHTGSFFPVSATLTVFP*
Ga0075426_106877261	3300006903	Populus Rhizosphere	VAGTSYSVNVSVADITAQTFFDVRFIAPGNKTSDVVLNWQRGVTASHGVPAGTASGIWTINGVRPHQIETDHTGSFIPVSATITVSP*
Ga0075424_1010994771	3300006904	Populus Rhizosphere	SDLRFDVTAVTAGGSFSVNIAGSNLTSQTFFDVRFKAPGSNAYSVLLNWQKGLVASHDVPAGTAAGSWTIDGVRAHEIEADHTGSFFPVSATIIVSP*
Ga0075424_1011106541	3300006904	Populus Rhizosphere	FSFSGSSLTPQSFFDVRFSAPESNSYQVVLNWQKGVELSHSVPASTAPGMWTINGVRAHQMETDHTGSFNPVSAVITVSQ*
Ga0075424_1021704962	3300006904	Populus Rhizosphere	LSVSGPNLTSETFLDVRFISPGSNESAVVLNWQRGLAASHDVAAGTASGTWTINGVRAHEIETDHTGDFVPVSATITVSR*
Ga0075436_1000798961	3300006914	Populus Rhizosphere	VVSRFELDRSVVASGSSYSVELSGSNLTPPMFFDIRVRRSGSNDPFVVLNWQRGLAANHDVPAGIASGSWTITGVRAHEIETDHTGNFFPVSATITVSQ*
Ga0079219_109399962	3300006954	Agricultural Soil	FDVRFSAQGSNATDVVLNWQRGPAASHALPSGTASGIWTIKGVRAHQIETDHTGTFFPISATIRVFNPLSPQTLVESNAAAR*
Ga0075435_1011869692	3300007076	Populus Rhizosphere	VNLSGSNLTPQTFFDVRFTAPGSSDSDVVLNWQRGLAATHSVPAGTALGIWTITGVRAHQVETDHTGNFVQVSATMTVSP*
Ga0066710_1036655981	3300009012	Grasslands Soil	NSYSVNVSGSNLTSQAFFDVRVTAPGSYTSDVVLNWQRGLAPIHSVPAGTASGIWTITGVRAHEIETDHTGNFVPVSATITVSP
Ga0066710_1040076842	3300009012	Grasslands Soil	VLAVRFLRNFSASVSGSDILTSQTFFDVRFTAPGSNASDVALNWQRGLVANHDVSVGTPAGNWTVTGVRAHQVETDHTGDFDPVYATIMVAP
Ga0066710_1043042761	3300009012	Grasslands Soil	LYIPSILIPTPVVKTVRFDRVVVPAGSSYSVDLSGSNLTPEMFFDVRFIGPGSNESAVVLNWQRGLAVKHDVPAGTPLGAWIINGVRAHEIETDHTGIFFPVSATITVSP
Ga0111539_104002772	3300009094	Populus Rhizosphere	LAKFSGSNLTSQTFFDVRFTAPGSNASNVALNWQTGVASSHDVPPALALGNWTINGVRAHEVETDHTGIFFPVSATITVVP*
Ga0066709_1002238745	3300009137	Grasslands Soil	GSNLRPDTFFDVRFISPGSNESAVALNWQRGLAQRHDLPAGIAPGAWTINGVRAHLEDVDHTGDFIPISAT*
Ga0114129_104836533	3300009147	Populus Rhizosphere	SQTFFDVRFTAPGSNVSDVALNWQRGLAASHSVPVGTSAGNWTVTGVRPHQIEADHTGDFVPVFATITVAP*
Ga0114129_111388561	3300009147	Populus Rhizosphere	TNLAPQPFFDVRFISPESSESAVALNWQRGLFASHDVPASIARGSWKITGVRAHEIETDHSGDFFSVSATITVSP*
Ga0111538_104451771	3300009156	Populus Rhizosphere	TPETFFDIRFTSPESNVSDVVLNWQRGVAASHAVPVGTAPGTWTINSVRAHQIETDHTGSFIPVRATITVSPALSN*
Ga0111538_117947732	3300009156	Populus Rhizosphere	AILVPAAVVTDLQFDRTTAGAGASFSVNVSGLNLDAQTFFDVRFTSPGNADSAVVLNWQRGLTATHTVAADTTPGDWTINGVRAHQIETDHTGRFVAVSATITVPR*
Ga0111538_126921832	3300009156	Populus Rhizosphere	GSSYSVNVSGFNLTPETFFDIRFISPESNVSDVVLNWQRGVAASHALPAGTAPGTWTINGVRAHQSETDHTGSFVPVQATITISPAP*
Ga0075423_105938971	3300009162	Populus Rhizosphere	KTVRFDRVVVPAGSSFSVDLSGSNLTTEMFFDVRFISPESSESAVALNWQRGLFASHDVPASIARGSWKITGVRAHEIETDHSGDFFSVSATITVSP*
Ga0075423_130348221	3300009162	Populus Rhizosphere	YDVRFTSPESNESAVALNWQKGFAENHEAPAGLASGSWKITSVRAHEIETDHTGIFFPVSATITVP*
Ga0105242_132451001	3300009176	Miscanthus Rhizosphere	IQFDRTTVVAGTSYSVNVSGVNLTPQTFFDVRFTAPGSNATDVVLNWQRGVASAHGVSAATSPGIWTINGIRAHQQEEDHTGDLLPVSARITVSH*
Ga0126380_120630741	3300010043	Tropical Forest Soil	VRFDRVAVPAGSSYSVDLSGSNLTQEMFFDVRFTSPESNQSVVVLNWQKGLVENHEVPAGIALGSWTITDVRAHKIETDHTGIFFPVSATIIVSP*
Ga0126384_118437761	3300010046	Tropical Forest Soil	PAPIITALRFDRSTVVAGTSYLVTVSGSNLTPQTYFDVRFTTPGSNDSAVVLNWQRGLATSHAVSVGTAVGIWTITGIRAHDIETDHTGNFVPVSATITVAP*
Ga0126384_120294712	3300010046	Tropical Forest Soil	SSYSASIAGSDQLTSQTFFDVRFIAPGSNGSDVVLNWQKGLAASHALSIGTAAGTWTITGVRAHQVEGDHAGNFVPVYATIRVVP*
Ga0126382_105454931	3300010047	Tropical Forest Soil	NLTSQTFFDVRCTSPGSNVSMIVLNWQRGVTATHDVPAGTASGTWTISGVRAHEIETDHTGNFFPVSAPMIVLP*
Ga0126382_108541732	3300010047	Tropical Forest Soil	VRFDRMVVPAGSSYSVDLSGSNLTPEMFFDVRFTSPESNESAVALNWQQGLVAQHEVPAALGSWTITGVRAHKIETDHTGSFFPVSATLTVSP*
Ga0126382_114872521	3300010047	Tropical Forest Soil	QTFFDVRFTSPGSNSSAVALNWQRGLTASHVVAVGTAAGNWTVTGVRAHQAEADHSGNFDPVYATITVAP*
Ga0126382_116271161	3300010047	Tropical Forest Soil	TGSFYSVNFSGPNLIDEMFFDVRFTAPGSNDSVVVLNWQKGLVAKHSVPADTTSGVWTINGVRAHKTETDHNGNFVPVPATITVSQ*
Ga0126382_117767901	3300010047	Tropical Forest Soil	TPQTFFDVRFTGPGSNDSAVVLNWQRGLAASHGVAAGTAFGLWTINGVRAHEIETDHTGSFFPVSAAITVSP*
Ga0126382_124649851	3300010047	Tropical Forest Soil	YSVNVSGSNLTAETFLDVRFISPGSNESAVVLNWQKGLVARHDVPAGTASGVWAINGVRAHQIETDHTDSFVPVSATITVSP*
Ga0126373_132857331	3300010048	Tropical Forest Soil	YSVTFPGPNLSDETFFDVRYAAPGSNDSGVAVNWQIGLAANHNVPADMTLGIWTITGVRAHQIETDHSGNFVPVWATITVSP*
Ga0134086_104316762	3300010323	Grasslands Soil	FDVRFTDPESHTGVVSNWQRGLAASHGVPIGTASGNWTINGVRAHQIEEDHTSSFVPVSATITVSP*
Ga0126370_119787961	3300010358	Tropical Forest Soil	IVTDLQFDRTSVVAGSSYSVDVSGSNLTSQTFFDVRFISPGSNESAVVLNWQKGLAARHDILAATASGVWAINGIRAHQIETDHTGNFVPVSATITVSR*
Ga0126376_119776051	3300010359	Tropical Forest Soil	TSISGSNLTDQTFFDVRFTKPGSNSSTVALNWQKGVVADHDVPAGSASGVWIINGVRAHSVEGDHTGNFFPVSATITVP*
Ga0126376_125654132	3300010359	Tropical Forest Soil	AELYTPAVLVPVSIVADLQFDRMNVVAGASYLATVSGSNLTPDTFFDVRFSSPGSNESAVVLNWQKGLVAKHDVPGGCASGVWTINGVRAHQIETDHAGNFVTFSAAITVSP*
Ga0126377_104284482	3300010362	Tropical Forest Soil	SYSVNVSGTNLTPETFFDIRFISPDSKESAVVLNWQRGVAASHGVLVGTASGVWTINGARAHQIETDHTGDFFPISATITVSR*
Ga0126377_115036352	3300010362	Tropical Forest Soil	PVVEKVRFDRVAVPAGSSYSVDLSGSNLTQEMFFDVRFTSPESNQSVVVLNWQKGLVENHEVPAGIALGSWTITDVRAHKIETDHTGIFFPVSATIIVSP*
Ga0126377_117193232	3300010362	Tropical Forest Soil	TAETFFDVEFTGPESNDSVVALNWQKGLSASHSVPAIIASGNWTITGLRAHKIETDHTGNFFPVSATITVSP*
Ga0126377_131553572	3300010362	Tropical Forest Soil	SDFRFDRTNVVAGGSYSVTVSGSNLTTQTFFDVRVTAPGSSTSDVVLNWQKGLVASHDVPAGIAAGTWTVTGVRAHEIESDHIDTFVPVSATITVLQ*
Ga0126379_109878992	3300010366	Tropical Forest Soil	ASYTVNVSGFNLTPDTFFDVRFISPDGNESAVALNWQRGLAQIHDVPAGVASGDWTINGVRAHRVETDHTGSFASVSATITVSP*
Ga0126379_113287372	3300010366	Tropical Forest Soil	APDMFFDVRFSSPQSNESAVALNWQKGLAENHEVPTGIASGSWKITGVLAHKIETDHTGIFFPVSATLTVSP*
Ga0126381_1016211912	3300010376	Tropical Forest Soil	VVTGGSYLVNLSGSNLTPQTFFDVQFTAPGSNTSNVALNWQTGLTASHTVSLDTAPGNWTINGVRAHQNEADHTGDFIPVSATITVVQVSP*
Ga0126383_113200111	3300010398	Tropical Forest Soil	LNISGSNLTPETFFDIRFIGPDTDSDVTLNWQKGLAASHDLPTGTPLGKWTINGVRAHEGEADHTGNFFPVSATITVSP*
Ga0126383_123311681	3300010398	Tropical Forest Soil	NLTDETFFDVHFTAPWSNDSGVVLDWQEGVVANHTVPAGITSGIWTINAVRAHQIETDHTGNFVPVSAMITVFP*
Ga0134122_124198472	3300010400	Terrestrial Soil	NLSGSNLTQETFFDVRVTSPGTNESTVVLNWQRGLAVSHGLPFGTVSGRWTITGVRAHEIETDHTGGFFPVLATITVSP*
Ga0105246_114818041	3300011119	Miscanthus Rhizosphere	KFDRTSVVAGASYSAGFSGSYLTSQTFFDVRFTAPGTNASDVSLNWQRGLDTNHDVPAGIAPGNWTINGVRAHEIETDHTGGFFPVSATIMVYP*
Ga0157334_10719031	3300012509	Soil	GGGAFVITFGPDLVVTEFRFDRANVPSGGSFSVNISGPNLTSQTYFDVRFTSPGSNESADALNWQRGLAASHEVAAGTALGTWTINGVRAHEIETDHTGDFFPVSSTITVSP*
Ga0126375_113032011	3300012948	Tropical Forest Soil	VVVPAGSSYSVDLSGSNLTPEMFFDVRFIGPGSNESAVVLNWQRGLAVKHDVPAGTPLGAWIINGVRAHEIETDHTGIFFPVSATITVSP*
Ga0126375_116325662	3300012948	Tropical Forest Soil	VTNLQFDHMNVFAGASYWADISGSNLTPETFFDVRFVSPGSNESAVALNWQKGLAERHEVPRGTASGEWTINGVRAHQVETDHTGSFVPVSAKITVEMSLQHESQEADSGGQIKCTPER*
Ga0126375_119298151	3300012948	Tropical Forest Soil	MFFDVRFISPGSNQSSVVLNWQKGLAASHEVPAGIAPGSWKIMGVRAHKIETDHTGNFSQVSATITVSP*
Ga0164299_114019391	3300012958	Soil	SAEVYIPSILVPIPVVRAVRFDRMVVPTGSSFSVDLSGSNLTREMFFDIRFTSPESNESVVALNWQNGLAENHELPAGLAPGSWTITGVRAHRIETDHTGNFFPVSATITVSP*
Ga0126369_113478512	3300012971	Tropical Forest Soil	SGSNLTAQTFFDVRLTSPGSTDSAVVSNWQRGVAASHDVPVGIAAGSWTINGVRAHEVETDHTGIFFPVSATITVSP*
Ga0126369_114757821	3300012971	Tropical Forest Soil	GSSFSVNLSGSNLAPEMFFDVRFTSPESNESAVALNWQEGLVANHEVPRSLALGSWTITDVRAHEIETDHTGIFFPVSATITVSP*
Ga0126369_128209152	3300012971	Tropical Forest Soil	MVVPAGSSFSVDLSGSNLTPEMFFDVRLTSPESNESVVALNWQKGLAENHEVPAGLAPGSWTITGVRAHKIEGNHTGIFFPVSATLTVSP*
Ga0163162_107798883	3300013306	Switchgrass Rhizosphere	SSYSVDLSGSNLTPEMFFDVRFTSPESNELVVALNWQKGLAGNHEVPAGIASGSWTITGVRAHKIETDHTGIFFPVSATLTVSP*
Ga0157380_131667921	3300014326	Switchgrass Rhizosphere	VLKPVPVVNNLRIDRSVVSAGSSFAADFSGSNLTSEMFFDVRFISPETNESAVVLNWQKGQKGSHVVEAGVASGNWTITGVRAHQIETDHTEGFLPVLASVTVLP*
Ga0132258_102479764	3300015371	Arabidopsis Rhizosphere	VVPVGSSYSVDFSGSNLTPDLFFDVRFTNPESSESAVALNWQKGLAENHQVPADLAPGSWKITSVRTHAIETDHTGNFFPVSATITVSR*
Ga0132258_107253991	3300015371	Arabidopsis Rhizosphere	MLLPDLLIRSKLSGSNLTSQTFFDVRFTSPGGNDSIVVFNWQRGLTASHDVAAGIASGRWTINGVRAHEIEADHTGSFVPVSATITVSP*
Ga0132258_116175952	3300015371	Arabidopsis Rhizosphere	LLDDEQPLGGSYSVNLSGSNLSAQTFFDVRFTAPGSDSSDVVLNWQRGVVLSHDVPTDLASGMWAINGVRAHEIETDHTGNFDPVSATIIVSR*
Ga0132258_118104692	3300015371	Arabidopsis Rhizosphere	GLQFDRTTVAAGSSYSVNVSGSNLTSETFFDVRFTGPGSNAAAFVLNWQKGVAAKHDIPAGAASGVWTITGVRAHQIETDHIGIFVPASATITVFP*
Ga0132256_1026435221	3300015372	Arabidopsis Rhizosphere	MFFDVRFTTPESNESAVALNWQNRLAENHEAPAGLAPGSWTITGVRAHEIETDHTGIFFPVSATLTVSP*
Ga0132256_1026516512	3300015372	Arabidopsis Rhizosphere	MFFDVRFTSPENNESVVALSWQKGLAENHEVTAGVASGSWRITGVRAHKIETDHPGIFFPVSATLTVSP*
Ga0132257_1021009852	3300015373	Arabidopsis Rhizosphere	AGLGFDRMSVVAGTSYSVNVSGASITAQTFFDVRFIAPGSRTSDVVLNWQRGVTATHEVPIGTASGIWTINGVRPHQIETDHTGSFIPVSATITVSP*
Ga0132257_1027676641	3300015373	Arabidopsis Rhizosphere	IPSILVPIPVVRAVRLNQMVVPARSSYSVDLSGSNLTPEMFFDVRFTSPESNELVVALNWQKGLAGNHEVPAGIASGSWTITGVRAHKIETDHTGIFFPVSATLTVSP*
Ga0132255_1029299632	3300015374	Arabidopsis Rhizosphere	AVRFDRMVVPAGSSFSVDLSGSNLTPEMFFDVRFTSPESNESAVALNWQNGLAENHEVPAGLAPGSWTITDVRAHELETDHTGNFYPVSATITVSP*
Ga0132255_1029999062	3300015374	Arabidopsis Rhizosphere	SSFAVDISGSNLTPQTFFDVRFAAPDSDAYQVVLNWQKGLEASHSVPAGTAPGMWTINGVRAHQIETDHTGEFVPVSATITVSS*
Ga0132255_1037403282	3300015374	Arabidopsis Rhizosphere	GGSSYLVDVSGSNLTSETFFDIRFTSPGTNGSDVALNWQRGVTAGHYVPASTALGIWNINGVRAHQIETDHTGSFSPVSATIMVAP*
Ga0132255_1041822662	3300015374	Arabidopsis Rhizosphere	AEVYIPSVLMPIPVVRGVRFDRMVVPAGSSYSVDFSGSNLTPEMFYDVRFTSPESNESAVALNWQKGFAENHEAPAGLASGSWKITSVRAHEIETDHTGIFFPVSATITVP*
Ga0132255_1057923762	3300015374	Arabidopsis Rhizosphere	GLGFDRTTVATGSTYSVNVSGPNLTPQTFFDVRFIAPGSAASDVVLNWQRGVTTNHDVPFGTASGIWAITGVRPHQIESDHTGSFIRVSATITVSR*
Ga0182033_112334412	3300016319	Soil	FDLAVVGASYSVDISGSGITAGTFFDVRFTSPGNNASPVVLNWQRGLAASHDVPIGTASRNWTINGVRAHRIETDHTGNFYPVSATITVSQ
Ga0182035_113472912	3300016341	Soil	DRTSVLVGGSFSVNISGPNLTTQTFFDVRYTSPGSNESAVVLNWQRGLAASHDVTAGTASGTWTINGVRAHEIETDHTGDFFPVTATITVFPMTPSIQIFSDLGKAPQPR
Ga0182035_114026091	3300016341	Soil	LTTETFFDVRFISPGSNESAVVLNWQKGPAASHALPAGIAPGIWTINGVRAHEIETDHTGIFFPVSATITVSNPLSP
Ga0182032_112746432	3300016357	Soil	NNLTDKTFFDIRFTAPGSNDSGVVLNWQTGTAANHSVTAGTTPGSWTITGVRAHQIETDHDGNFVPLSAVITVVTR
Ga0182037_108710233	3300016404	Soil	LTADTFFDVRFTSPGSTRSAVVLNWQTGTVESHDVPAGLAPGKWTINGVRPHETETDHSGDFVLVSATITVSQ
Ga0182039_101613702	3300016422	Soil	FDRMVVPAGSSYSVDLSGSNLTPEMFFDVRFTSPESNESAVALNWQKGLAENHKVPASLAPGSWTITGVRAHKIEPDHTGSFFPVSATIRVSPDRFNCTKCANPFLD
Ga0182038_112984762	3300016445	Soil	TFGPDLVVTELRFDRTSVLVGGSFSVNISGPNLTTQTFFDVRYTSPGSNESAVVLNWQRGLAASHDVTAGTASGTWTINGVRAHEIETDHTGDFFPVTATITVFPMTPSIQIFSDLGKAPQPH
Ga0187773_107789762	3300018064	Tropical Peatland	FTSTFSGSNLAVDTFFDVRFSAQGSNATDVVLNWQRGPAASHALPAGTPSGTWTIKGVRAHQIETDHTGNFEPVSATITVSP
Ga0187773_111609661	3300018064	Tropical Peatland	VRFTSPESNESAVVLNWQKGLVANHDVPAGLALGSWTITGVRAHEIETDHTGIFFPVTATITVSP
Ga0126371_114438011	3300021560	Tropical Forest Soil	SVVAGSSYAASFSGLNLTDETFFDVRYTASGSNDSSVALNWQKGIAANHSVPADISSGIWMINGVRAHQIETDHSGNFVPVLATITVSP
Ga0126371_131572351	3300021560	Tropical Forest Soil	VSGFNLTSQTFFDVRFVSPGGNQSLVVLNWQKGIVAGHDVPAGTASGVWNINGVRAHQIQTDHTGNFVPVSATITVSP
Ga0126371_132282621	3300021560	Tropical Forest Soil	GSSYSVDLSGSNLTSGMFFDVRFTSPESNESAVVLNWQQGLTENHAIPAGLVSGSWTITGVRAHQIETDHTGTFFPVSATITVTP
Ga0247664_10503751	3300024232	Soil	APVITDFHFDRTTVVAGTSYSVNVSGTNLAPQTFFDVRFTSPGSNESAVVLNWQKGLAASHDVPVGIASGVWAINGVRAHQIETDHTGTFVTVSASITVFP
Ga0209687_12509041	3300026322	Soil	FDIRFTTPGSNASDVVLNWQRGVAARHDVSVGAAVGRWTINGVRAHEVETDHTGWFIPVSETMTVSR
Ga0209382_111636211	3300027909	Populus Rhizosphere	GSDLTAQTFFDVRFTAPGSNASAVVLNWQRGMALSHDVSPDTAAGNWTINGVRPHEIETDHTGIFFPVSATITVTP
Ga0306917_113545011	3300031719	Soil	IPVVNAVRFDRMVVPAGSSYSVALSGSNLAPDMFFDVRFTSPERNRSAVVWNWQKGLVENHEVPVGLSPGSWTITSVRAHEIETDHTGIFFPVSATITVSPLVPSIQIFSDHGKAPQPH
Ga0306917_114390492	3300031719	Soil	TNLRFDRTNTVTGSSYSLNISGSNLTPETFFDIRFIGPGHTDFDVALNWQKGLAARHDVPGGTASGVWTINGVRAHQIETDHTGDFVPASATLTVSP
Ga0307473_104141232	3300031820	Hardwood Forest Soil	LRFDQTSLAAGSSFNVSVSGSNLTSQSFFDVRFSAPGSNSYQVVLNWQKGLEASHIVPAGTASGMWTINGVRAHQIETDQTGIFNPVSAVITVSP
Ga0307473_115436271	3300031820	Hardwood Forest Soil	QFDRMNTVAGSSYSVSISGSNLNSQTFFDVRFASPGSNQSAVVLNWQKGFAARHDVAAGIASGAWAINGVRAHQIETDHTGNFVPVSATITVSP
Ga0310916_109571521	3300031942	Soil	FSVNISGPNLTTQTFFDVRYTSPGSNESAVVLNWQRGLAASHDVTAGTASGTWTINGVRAHEIETDHTGDFFPVTATITVFPMTPSIQIFSDLGKAPQPH
Ga0306926_125820331	3300031954	Soil	NWWSVSAGNSYSVNVSGSNLTSQTFFDVRVTAPGSYTSDVILNWQKGLAAIHSVPAGTASGMWTISGVRAHEIETDHTGNFYPVSATITVSQ
Ga0310899_106592971	3300032017	Soil	YIPSVLVPTPVVTGMQFDRTTIVAGGSFSVSISGPNLTTQTFFDVRFTSPGTTESAVVLNWQKGLATSHDVAAGIASGNWTVIGVRAHEIETDHTGSFFPVSATITVSP
Ga0310896_105586691	3300032211	Soil	YSVNISGSNLTPQTFFDVRFIAPGSTLSDVAMNWQNGVAGDHFVLAGTAPGIWTINGVRAHEVETDHTGSFVPVNATITVSP
Ga0306920_1029728982	3300032261	Soil	LPVSATIVLVAPFVESFRFDRSEVVSGSSFSADISGSNLTSQTFFDVQFTAPGSNGAAVALNWQRGLSMSHDVPAEMAIGSWTINGVRAHEIETDHTGNFSPVSATITVSP
Ga0306920_1036166942	3300032261	Soil	FFDVRFISPGSNESAVALNWQKGLVQIHDVPAGTPLGAWTINGVRGHQIETDHTGNFVPVSATITVSQGIIFLRRGGN
Ga0306920_1037128592	3300032261	Soil	LTTQTFFDVRYTSPGSNESAVVLNWQRGLAASHDVTAGTASGTWTINGVRAHEIETDHTGDFFPVTATITVFPMTPSIQIFSDLGKAPQPH

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F063520

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences