Metagenome / Metatranscriptome Family F063437

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F063437
Family Type	Metagenome / Metatranscriptome
Number of Sequences	129
Average Sequence Length	48 residues
Representative Sequence	MPKVLVCVFCSEEIEAQEKWLDVPGRTNEVAHLKCWKENNRPEVRSRST
Number of Associated Samples	109
Number of Associated Scaffolds	129

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	78.29 %
% of genes near scaffold ends (potentially truncated)	23.26 %
% of genes from short scaffolds (< 2000 bps)	82.17 %
Associated GOLD sequencing projects	101
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.54

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (64.341 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (18.605 % of family members)
Environment Ontology (ENVO)	Unclassified (30.233 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (41.085 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 9.09% β-sheet: 14.29% Coil/Unstructured: 76.62%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.54
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.54
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 129 Family Scaffolds
PF00118	Cpn60_TCP1	15.50
PF08734	GYD	7.75
PF00903	Glyoxalase	3.10
PF00027	cNMP_binding	3.10
PF11249	DUF3047	3.10
PF00487	FA_desaturase	2.33
PF11154	DUF2934	1.55
PF02675	AdoMet_dc	1.55
PF00941	FAD_binding_5	1.55
PF13408	Zn_ribbon_recom	0.78
PF00072	Response_reg	0.78
PF04392	ABC_sub_bind	0.78
PF03795	YCII	0.78
PF13545	HTH_Crp_2	0.78
PF04226	Transgly_assoc	0.78
PF13701	DDE_Tnp_1_4	0.78
PF00011	HSP20	0.78
PF11897	DUF3417	0.78
PF07238	PilZ	0.78
PF03448	MgtE_N	0.78
PF00005	ABC_tran	0.78
PF00528	BPD_transp_1	0.78
PF06305	LapA_dom	0.78
PF13384	HTH_23	0.78
PF14499	DUF4437	0.78
PF00166	Cpn10	0.78
PF12681	Glyoxalase_2	0.78
PF13683	rve_3	0.78
PF13649	Methyltransf_25	0.78
PF01070	FMN_dh	0.78
PF07355	GRDB	0.78
PF01068	DNA_ligase_A_M	0.78
PF12867	DinB_2	0.78
PF13492	GAF_3	0.78

COG ID	Name	Functional Category	% Frequency in 129 Family Scaffolds
COG0459	Chaperonin GroEL (HSP60 family)	Posttranslational modification, protein turnover, chaperones [O]	15.50
COG4274	Uncharacterized conserved protein, contains GYD domain	Function unknown [S]	7.75
COG1398	Fatty-acid desaturase	Lipid transport and metabolism [I]	2.33
COG3239	Fatty acid desaturase	Lipid transport and metabolism [I]	2.33
COG1586	S-adenosylmethionine decarboxylase	Amino acid transport and metabolism [E]	1.55
COG0069	Glutamate synthase domain 2	Amino acid transport and metabolism [E]	0.78
COG0071	Small heat shock protein IbpA, HSP20 family	Posttranslational modification, protein turnover, chaperones [O]	0.78
COG0234	Co-chaperonin GroES (HSP10)	Posttranslational modification, protein turnover, chaperones [O]	0.78
COG1304	FMN-dependent dehydrogenase, includes L-lactate dehydrogenase and type II isopentenyl diphosphate isomerase	Energy production and conversion [C]	0.78
COG1423	ATP-dependent RNA circularization protein, DNA/RNA ligase (PAB1020) family	Replication, recombination and repair [L]	0.78
COG1793	ATP-dependent DNA ligase	Replication, recombination and repair [L]	0.78
COG2239	Mg/Co/Ni transporter MgtE (contains CBS domain)	Inorganic ion transport and metabolism [P]	0.78
COG2261	Uncharacterized membrane protein YeaQ/YmgE, transglycosylase-associated protein family	General function prediction only [R]	0.78
COG2350	YciI superfamily enzyme, includes 5-CHQ dehydrochlorinase, contains active-site pHis	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.78
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	0.78
COG3771	Lipopolysaccharide assembly protein YciS/LapA, DUF1049 family	Cell wall/membrane/envelope biogenesis [M]	0.78

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	64.34 %
Unclassified	root	N/A	35.66 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	64.34 %
Unclassified	root	N/A	35.66 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	64.34 %
Unclassified	root	N/A	35.66 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	35.66 %
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	13.95 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	10.85 %
Aquificae	phylum	All Organisms → cellular organisms → Bacteria → Aquificae	1.55 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.78 %
unclassified Bacteria	no rank	All Organisms → cellular organisms → Bacteria → unclassified Bacteria	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	35.66 %
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	13.95 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	3.10 %
Aquificae	class	All Organisms → cellular organisms → Bacteria → Aquificae → Aquificae	1.55 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	0.78 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	35.66 %
Candidatus Rokubacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	13.18 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	3.10 %
Desulfurobacteriales	order	All Organisms → cellular organisms → Bacteria → Aquificae → Aquificae → Desulfurobacteriales	0.78 %
unclassified Chloroflexi	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi	0.78 %
Candidatus Bipolaricaulota	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Bipolaricaulota	0.78 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	35.66 %
unclassified Candidatus Rokubacteria	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria	9.30 %
Myxococcales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	1.55 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.78 %
Candidatus Bipolaricaulis	genus	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Bipolaricaulota → Candidatus Bipolaricaulis	0.78 %
Desulfurobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Aquificae → Aquificae → Desulfurobacteriales → Desulfurobacteriaceae	0.78 %
unclassified Deltaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria	0.78 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	35.66 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	9.30 %
Cystobacterineae	suborder	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae	1.55 %
Candidatus Bipolaricaulis anaerobius	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Bipolaricaulota → Candidatus Bipolaricaulis → Candidatus Bipolaricaulis anaerobius	0.78 %
Olavius sp. associated proteobacterium Delta 1	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Olavius sp. associated proteobacterium Delta 1	0.78 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.78 %
Desulfurobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Aquificae → Aquificae → Desulfurobacteriales → Desulfurobacteriaceae	0.78 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	35.66 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	9.30 %
Archangiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Archangiaceae	1.55 %
Candidatus Bipolaricaulis anaerobius	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Bipolaricaulota → Candidatus Bipolaricaulis → Candidatus Bipolaricaulis anaerobius	0.78 %
Olavius sp. associated proteobacterium Delta 1	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Olavius sp. associated proteobacterium Delta 1	0.78 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.78 %
Desulfurobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Aquificae → Aquificae → Desulfurobacteriales → Desulfurobacteriaceae	0.78 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	35.66 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	9.30 %
Stigmatella	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Archangiaceae → Stigmatella	1.55 %
Candidatus Bipolaricaulis anaerobius	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Bipolaricaulota → Candidatus Bipolaricaulis → Candidatus Bipolaricaulis anaerobius	0.78 %
Olavius sp. associated proteobacterium Delta 1	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Olavius sp. associated proteobacterium Delta 1	0.78 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.78 %
Desulfurobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Aquificae → Aquificae → Desulfurobacteriales → Desulfurobacteriaceae	0.78 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	35.66 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	9.30 %
Stigmatella aurantiaca	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Archangiaceae → Stigmatella → Stigmatella aurantiaca	1.55 %
Candidatus Bipolaricaulis anaerobius	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Bipolaricaulota → Candidatus Bipolaricaulis → Candidatus Bipolaricaulis anaerobius	0.78 %
Olavius sp. associated proteobacterium Delta 1	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Olavius sp. associated proteobacterium Delta 1	0.78 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.78 %
Desulfurobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Aquificae → Aquificae → Desulfurobacteriales → Desulfurobacteriaceae	0.78 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	35.66 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	9.30 %
Stigmatella aurantiaca DW4/3-1	strain	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Archangiaceae → Stigmatella → Stigmatella aurantiaca → Stigmatella aurantiaca DW4/3-1	1.55 %
Candidatus Bipolaricaulis anaerobius	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Bipolaricaulota → Candidatus Bipolaricaulis → Candidatus Bipolaricaulis anaerobius	0.78 %
Olavius sp. associated proteobacterium Delta 1	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Olavius sp. associated proteobacterium Delta 1	0.78 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.78 %
Desulfurobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Aquificae → Aquificae → Desulfurobacteriales → Desulfurobacteriaceae	0.78 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	0.78 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000443\|F12B_10032811	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Bipolaricaulota → Candidatus Bipolaricaulis → Candidatus Bipolaricaulis anaerobius	1004	Open in IMG/M
3300000550\|F24TB_10625698	Not Available	745	Open in IMG/M
3300000550\|F24TB_11647641	Not Available	743	Open in IMG/M
3300000574\|JGI1357J11328_10194006	Not Available	551	Open in IMG/M
3300000956\|JGI10216J12902_108499302	All Organisms → cellular organisms → Bacteria	948	Open in IMG/M
3300002122\|C687J26623_10074980	Not Available	920	Open in IMG/M
3300002245\|JGIcombinedJ26739_101589430	Not Available	551	Open in IMG/M
3300002886\|JGI25612J43240_1055814	Not Available	593	Open in IMG/M
3300004099\|Ga0058900_1408987	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	920	Open in IMG/M
3300004117\|Ga0058893_1004743	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	530	Open in IMG/M
3300005294\|Ga0065705_10586497	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	715	Open in IMG/M
3300005406\|Ga0070703_10011802	All Organisms → cellular organisms → Bacteria	2471	Open in IMG/M
3300005440\|Ga0070705_101098836	Not Available	650	Open in IMG/M
3300005444\|Ga0070694_100006034	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	7352	Open in IMG/M
3300005445\|Ga0070708_101628881	Not Available	600	Open in IMG/M
3300005467\|Ga0070706_100299531	Not Available	1500	Open in IMG/M
3300005467\|Ga0070706_100364476	All Organisms → cellular organisms → Bacteria → Proteobacteria	1346	Open in IMG/M
3300005468\|Ga0070707_101292531	All Organisms → cellular organisms → Bacteria	696	Open in IMG/M
3300005471\|Ga0070698_100926025	Not Available	817	Open in IMG/M
3300005471\|Ga0070698_101737088	Not Available	576	Open in IMG/M
3300005518\|Ga0070699_101166951	Not Available	706	Open in IMG/M
3300005526\|Ga0073909_10271892	All Organisms → cellular organisms → Bacteria	760	Open in IMG/M
3300005564\|Ga0070664_100120540	All Organisms → cellular organisms → Bacteria	2296	Open in IMG/M
3300006041\|Ga0075023_100071718	All Organisms → cellular organisms → Bacteria → Proteobacteria	1138	Open in IMG/M
3300006047\|Ga0075024_100193154	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	950	Open in IMG/M
3300006845\|Ga0075421_102766068	Not Available	506	Open in IMG/M
3300006852\|Ga0075433_10388738	All Organisms → cellular organisms → Bacteria	1231	Open in IMG/M
3300006854\|Ga0075425_100747032	All Organisms → cellular organisms → Bacteria	1122	Open in IMG/M
3300007265\|Ga0099794_10089521	All Organisms → cellular organisms → Bacteria	1526	Open in IMG/M
3300007265\|Ga0099794_10535411	Not Available	618	Open in IMG/M
3300009078\|Ga0105106_10186510	All Organisms → cellular organisms → Bacteria → Aquificae → Aquificae → Desulfurobacteriales → Desulfurobacteriaceae	1517	Open in IMG/M
3300009088\|Ga0099830_10141929	All Organisms → cellular organisms → Bacteria	1840	Open in IMG/M
3300009088\|Ga0099830_11262541	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	614	Open in IMG/M
3300009090\|Ga0099827_10693749	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	880	Open in IMG/M
3300009143\|Ga0099792_10027257	All Organisms → cellular organisms → Bacteria	2613	Open in IMG/M
3300009143\|Ga0099792_10166038	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Archangiaceae → Stigmatella → Stigmatella aurantiaca → Stigmatella aurantiaca DW4/3-1	1229	Open in IMG/M
3300009147\|Ga0114129_12744771	All Organisms → cellular organisms → Bacteria	586	Open in IMG/M
3300009171\|Ga0105101_10265596	All Organisms → cellular organisms → Bacteria → Aquificae → Aquificae	829	Open in IMG/M
3300009804\|Ga0105063_1039920	All Organisms → cellular organisms → Bacteria	638	Open in IMG/M
3300009816\|Ga0105076_1020857	All Organisms → cellular organisms → Bacteria	1136	Open in IMG/M
3300009837\|Ga0105058_1123113	All Organisms → cellular organisms → Bacteria	619	Open in IMG/M
3300010159\|Ga0099796_10184699	All Organisms → cellular organisms → Bacteria	838	Open in IMG/M
3300010391\|Ga0136847_12701155	Not Available	838	Open in IMG/M
3300010400\|Ga0134122_11068110	Not Available	797	Open in IMG/M
3300010400\|Ga0134122_12399452	Not Available	575	Open in IMG/M
3300011120\|Ga0150983_15941910	Not Available	617	Open in IMG/M
3300011270\|Ga0137391_10508344	All Organisms → cellular organisms → Bacteria	1019	Open in IMG/M
3300011271\|Ga0137393_11321606	All Organisms → cellular organisms → Bacteria	610	Open in IMG/M
3300012034\|Ga0137453_1019283	All Organisms → cellular organisms → Bacteria	1068	Open in IMG/M
3300012174\|Ga0137338_1102444	Not Available	630	Open in IMG/M
3300012189\|Ga0137388_10064275	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	3031	Open in IMG/M
3300012199\|Ga0137383_11074663	Not Available	584	Open in IMG/M
3300012203\|Ga0137399_10166539	Not Available	1771	Open in IMG/M
3300012205\|Ga0137362_10201269	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	1714	Open in IMG/M
3300012355\|Ga0137369_10714238	Not Available	688	Open in IMG/M
3300012582\|Ga0137358_10555129	Not Available	772	Open in IMG/M
3300012683\|Ga0137398_11125959	All Organisms → cellular organisms → Bacteria	539	Open in IMG/M
3300012685\|Ga0137397_10047316	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	3083	Open in IMG/M
3300012917\|Ga0137395_11198138	Not Available	532	Open in IMG/M
3300012923\|Ga0137359_10287267	All Organisms → cellular organisms → Bacteria → Proteobacteria	1466	Open in IMG/M
3300012958\|Ga0164299_11414571	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	538	Open in IMG/M
3300012960\|Ga0164301_10251568	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1161	Open in IMG/M
3300015241\|Ga0137418_10057192	All Organisms → cellular organisms → Bacteria	3574	Open in IMG/M
3300015259\|Ga0180085_1113744	Not Available	802	Open in IMG/M
3300015371\|Ga0132258_10004794	All Organisms → cellular organisms → Bacteria	26341	Open in IMG/M
3300018052\|Ga0184638_1116390	All Organisms → cellular organisms → Bacteria	977	Open in IMG/M
3300018063\|Ga0184637_10042932	All Organisms → cellular organisms → Bacteria	2751	Open in IMG/M
3300018071\|Ga0184618_10159472	All Organisms → cellular organisms → Bacteria	926	Open in IMG/M
3300018077\|Ga0184633_10621329	Not Available	508	Open in IMG/M
3300018078\|Ga0184612_10527939	Not Available	571	Open in IMG/M
3300018084\|Ga0184629_10197203	All Organisms → cellular organisms → Bacteria	1039	Open in IMG/M
3300018422\|Ga0190265_11099049	All Organisms → cellular organisms → Bacteria	915	Open in IMG/M
3300018422\|Ga0190265_11678653	Not Available	746	Open in IMG/M
3300018469\|Ga0190270_13238830	Not Available	516	Open in IMG/M
3300019877\|Ga0193722_1088618	Not Available	752	Open in IMG/M
3300019879\|Ga0193723_1015973	Not Available	2334	Open in IMG/M
3300019881\|Ga0193707_1087285	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	948	Open in IMG/M
3300019882\|Ga0193713_1198330	Not Available	513	Open in IMG/M
3300019887\|Ga0193729_1213491	Not Available	646	Open in IMG/M
3300020579\|Ga0210407_11039188	All Organisms → cellular organisms → Bacteria	623	Open in IMG/M
3300020580\|Ga0210403_10308006	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1298	Open in IMG/M
3300020580\|Ga0210403_10515336	Not Available	971	Open in IMG/M
3300021081\|Ga0210379_10268098	Not Available	743	Open in IMG/M
3300021178\|Ga0210408_10500222	All Organisms → cellular organisms → Bacteria	966	Open in IMG/M
3300021432\|Ga0210384_10001094	All Organisms → cellular organisms → Bacteria	38227	Open in IMG/M
3300021432\|Ga0210384_10136583	Not Available	2200	Open in IMG/M
3300025160\|Ga0209109_10159788	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Archangiaceae → Stigmatella → Stigmatella aurantiaca → Stigmatella aurantiaca DW4/3-1	1130	Open in IMG/M
3300025165\|Ga0209108_10256337	Not Available	888	Open in IMG/M
3300025324\|Ga0209640_10552417	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Olavius sp. associated proteobacterium Delta 1	934	Open in IMG/M
3300025885\|Ga0207653_10062909	All Organisms → cellular organisms → Bacteria	1255	Open in IMG/M
3300025910\|Ga0207684_10002275	All Organisms → cellular organisms → Bacteria	19537	Open in IMG/M
3300025910\|Ga0207684_10013441	All Organisms → cellular organisms → Bacteria	7080	Open in IMG/M
3300025910\|Ga0207684_10209051	All Organisms → cellular organisms → Bacteria	1683	Open in IMG/M
3300025910\|Ga0207684_10241380	Not Available	1559	Open in IMG/M
3300025922\|Ga0207646_10011144	All Organisms → cellular organisms → Bacteria	8727	Open in IMG/M
3300025922\|Ga0207646_10245437	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	1617	Open in IMG/M
3300025922\|Ga0207646_10994277	All Organisms → cellular organisms → Bacteria	741	Open in IMG/M
3300026369\|Ga0257152_1000115	All Organisms → cellular organisms → Bacteria	4445	Open in IMG/M
3300026481\|Ga0257155_1045296	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	680	Open in IMG/M
3300026481\|Ga0257155_1060682	Not Available	599	Open in IMG/M
3300026482\|Ga0257172_1027524	All Organisms → cellular organisms → Bacteria → Proteobacteria	1019	Open in IMG/M
3300026496\|Ga0257157_1023907	All Organisms → cellular organisms → Bacteria	999	Open in IMG/M
3300026551\|Ga0209648_10414965	All Organisms → cellular organisms → Bacteria	869	Open in IMG/M
3300027013\|Ga0209884_1008346	All Organisms → cellular organisms → Bacteria	960	Open in IMG/M
3300027273\|Ga0209886_1084131	All Organisms → cellular organisms → Bacteria	513	Open in IMG/M
3300027277\|Ga0209846_1030084	All Organisms → cellular organisms → Bacteria	869	Open in IMG/M
3300027655\|Ga0209388_1145907	Not Available	670	Open in IMG/M
3300027727\|Ga0209328_10028973	All Organisms → cellular organisms → Bacteria	1703	Open in IMG/M
3300027727\|Ga0209328_10275267	Not Available	500	Open in IMG/M
3300027818\|Ga0209706_10151372	All Organisms → cellular organisms → Bacteria → Proteobacteria	1140	Open in IMG/M
3300027882\|Ga0209590_10438123	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	844	Open in IMG/M
3300027894\|Ga0209068_10000887	All Organisms → cellular organisms → Bacteria	15333	Open in IMG/M
3300027903\|Ga0209488_11233070	Not Available	502	Open in IMG/M
3300027909\|Ga0209382_10394750	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1542	Open in IMG/M
3300027915\|Ga0209069_10039834	All Organisms → cellular organisms → Bacteria	2201	Open in IMG/M
3300027915\|Ga0209069_10203152	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1012	Open in IMG/M
3300028792\|Ga0307504_10167443	All Organisms → cellular organisms → Bacteria	758	Open in IMG/M
3300029636\|Ga0222749_10018920	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	2834	Open in IMG/M
3300030006\|Ga0299907_10179037	Not Available	1752	Open in IMG/M
3300030990\|Ga0308178_1020807	All Organisms → cellular organisms → Bacteria → Proteobacteria	1039	Open in IMG/M
3300031720\|Ga0307469_11065582	Not Available	758	Open in IMG/M
3300031949\|Ga0214473_10047476	All Organisms → cellular organisms → Bacteria → Proteobacteria	5030	Open in IMG/M
3300032017\|Ga0310899_10311719	Not Available	733	Open in IMG/M
3300032180\|Ga0307471_101049694	All Organisms → cellular organisms → Bacteria	981	Open in IMG/M
3300032205\|Ga0307472_100933487	All Organisms → cellular organisms → Bacteria	806	Open in IMG/M
3300033433\|Ga0326726_10011479	All Organisms → cellular organisms → Bacteria → Proteobacteria	7811	Open in IMG/M
3300033433\|Ga0326726_10039785	All Organisms → cellular organisms → Bacteria → Proteobacteria	4105	Open in IMG/M
3300033433\|Ga0326726_10143848	All Organisms → cellular organisms → Bacteria → Proteobacteria	2169	Open in IMG/M
3300033486\|Ga0316624_11568817	Not Available	606	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	94.57%
Host-Associated	Host-Associated	5.43%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	79.07%
Aquatic	Environmental → Aquatic	15.50%
Plants	Host-Associated → Plants	5.43%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	76.74%
Sediment	Environmental → Aquatic → Sediment	10.85%
Freshwater	Environmental → Aquatic → Freshwater	4.65%
Rhizosphere	Host-Associated → Plants → Rhizosphere	4.65%
Peat	Environmental → Terrestrial → Peat	2.33%
Rhizoplane	Host-Associated → Plants → Rhizoplane	0.78%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	48.84%
Loam	Environmental → Terrestrial → Soil → Loam	22.48%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	10.85%
Sand	Environmental → Terrestrial → Soil → Sand	4.65%
Sediment	Environmental → Aquatic → Freshwater → Sediment	3.10%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	3.88%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	2.33%
Lake	Environmental → Aquatic → Freshwater → Lake	0.78%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	0.78%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.78%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.78%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.78%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	33.33%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	13.95%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	11.63%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	10.85%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	4.65%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	4.65%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	3.10%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	3.88%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	2.33%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	2.33%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	2.33%
Unclassified	Environmental → Terrestrial → Soil → Loam → Unclassified	1.55%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	0.78%
Contaminated	Environmental → Aquatic → Freshwater → Groundwater → Contaminated	0.78%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	0.78%
Uranium Contaminated	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated	0.78%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.78%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.78%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.78%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	18.60%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	13.95%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	10.08%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	9.30%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	4.65%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	4.65%
Groundwater Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand	4.65%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	3.88%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	3.88%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	2.33%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	2.33%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	2.33%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	2.33%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	2.33%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.55%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.55%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.55%
Soil	Environmental → Terrestrial → Soil → Loam → Unclassified → Soil	1.55%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	0.78%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Freshwater Sediment	0.78%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater → Contaminated → Groundwater	0.78%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.78%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	0.78%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.78%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	0.78%
Soil	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil	0.78%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.78%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.78%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.78%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000443	Amended soil microbial communities from Kansas Great Prairies, USA - BrdU F1.2B clc assemly	Environmental	Open in IMG/M
3300000550	Amended soil microbial communities from Kansas Great Prairies, USA - BrdU amended with acetate total DNA F2.4 TB clc assemly	Environmental	Open in IMG/M
3300000574	Subsurface groundwater microbial communities from S. Glens Falls, New York, USA - GMW46 contaminated, 5.4 m	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300002122	Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 10_2	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300002886	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_20cm	Environmental	Open in IMG/M
3300004099	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF236 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004117	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF222 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005294	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk Soil	Environmental	Open in IMG/M
3300005406	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG	Environmental	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005444	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005526	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1	Environmental	Open in IMG/M
3300005564	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG	Host-Associated	Open in IMG/M
3300006041	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2014	Environmental	Open in IMG/M
3300006047	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2013	Environmental	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300007265	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1	Environmental	Open in IMG/M
3300009078	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 10-12cm September2015	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009171	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 19-21cm May2015	Environmental	Open in IMG/M
3300009804	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N3_30_40	Environmental	Open in IMG/M
3300009816	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_0_10	Environmental	Open in IMG/M
3300009837	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_20_30	Environmental	Open in IMG/M
3300010159	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3	Environmental	Open in IMG/M
3300010391	Freshwater sediment microbial communities from Lake Superior, USA - Station SU-17. Combined Assembly of Gp0155404, Gp0155335, Gp0155336, Gp0155336, Gp0155403, Gp0155406	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300012034	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT526_2	Environmental	Open in IMG/M
3300012174	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT366_2	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012355	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_113_16 metaG	Environmental	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300012683	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaG	Environmental	Open in IMG/M
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental	Open in IMG/M
3300012917	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300015241	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015259	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT730_16_10D	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300018052	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_50_b2	Environmental	Open in IMG/M
3300018063	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_127_b2	Environmental	Open in IMG/M
3300018071	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_b1	Environmental	Open in IMG/M
3300018077	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_170_b1	Environmental	Open in IMG/M
3300018078	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_60_coex	Environmental	Open in IMG/M
3300018084	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_32_b1	Environmental	Open in IMG/M
3300018422	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 124 T	Environmental	Open in IMG/M
3300018469	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 T	Environmental	Open in IMG/M
3300019877	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2m1	Environmental	Open in IMG/M
3300019879	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2m2	Environmental	Open in IMG/M
3300019881	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3c2	Environmental	Open in IMG/M
3300019882	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H3a2	Environmental	Open in IMG/M
3300019887	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1c2	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300021081	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_32_coex redo	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300025160	Soil microbial communities from Rifle, Colorado, USA - sediment 10ft 2	Environmental	Open in IMG/M
3300025165	Soil microbial communities from Rifle, Colorado, USA - sediment 10ft 1	Environmental	Open in IMG/M
3300025324	Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 10_1 (SPAdes)	Environmental	Open in IMG/M
3300025885	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026369	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DW-05-A	Environmental	Open in IMG/M
3300026481	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NI-19-A	Environmental	Open in IMG/M
3300026482	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DW-16-B	Environmental	Open in IMG/M
3300026496	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NI-69-A	Environmental	Open in IMG/M
3300026551	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)	Environmental	Open in IMG/M
3300027013	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N3_30_40 (SPAdes)	Environmental	Open in IMG/M
3300027273	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N2_40_50 (SPAdes)	Environmental	Open in IMG/M
3300027277	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S3_20_30 (SPAdes)	Environmental	Open in IMG/M
3300027655	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1 (SPAdes)	Environmental	Open in IMG/M
3300027727	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM3H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300027818	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 19-21cm September2015 (SPAdes)	Environmental	Open in IMG/M
3300027882	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027894	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012 (SPAdes)	Environmental	Open in IMG/M
3300027903	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)	Environmental	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300027915	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2013 (SPAdes)	Environmental	Open in IMG/M
3300028792	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 19_S	Environmental	Open in IMG/M
3300029636	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030006	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT152D67	Environmental	Open in IMG/M
3300030990	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_149 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031949	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT98D197	Environmental	Open in IMG/M
3300032017	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D4	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300033433	Lab enriched peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF15MN	Environmental	Open in IMG/M
3300033486	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_N3_C1_D5_A	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
F12B_100328112	3300000443	Soil	MPKVLVCGFCSEEIEAEEKWLEVPGRGNEVAHLKCWKESNRPEVRSRSL*
F24TB_106256983	3300000550	Soil	MPKVLVCVFCSEEIEAEEKWLEVPGRGNEVAHLKCWKESNRPEVRSRSL*
F24TB_116476411	3300000550	Soil	MPKVLVCVFCSQEIDAKEKWLDVPGRGNEVAHLNCWKDSNRPEVRTRSL*
JGI1357J11328_101940062	3300000574	Groundwater	VFCAEEIGTEEKWLDVPGKVNEIAHLKCWKDNMRPEVRSRSV*
JGI10216J12902_1084993023	3300000956	Soil	MPKVLVCVFCSQEIDAEEKWLDVPGKGNEVAHLNCWKESNRPEV
C687J26623_100749803	3300002122	Soil	MPKVLVCVFCSEEIEAKEKWLDVPGRMNEVAHLKCWKENSRPEVRSRST*
JGIcombinedJ26739_1015894302	3300002245	Forest Soil	MPKVLVCVFCFEEIDGMEKWIDAPGRMNEVAHLKCWKENVRPEVRTRSV*
JGI25612J43240_10558142	3300002886	Grasslands Soil	HMPKVLVCVFCSEEIEAQEKWLDVPGRTNEVAHLKCWKENNRPEVRSRST*
Ga0058900_14089871	3300004099	Forest Soil	MPKVLVCVFCFEEIAMEEKWLDVPGRMNEVAHLKCWKDHSRPEVRSRSI*
Ga0058893_10047431	3300004117	Forest Soil	MPKVLVCAFCFEEIDGMEKWLDVPGRMNEAAHLKCWKENVRPEVRTRSV*
Ga0065705_105864972	3300005294	Switchgrass Rhizosphere	MPKVLVCVFCSEEIEAKEKWLDVPGRMNEVAHLKCWKENIRPEVRSRSV*
Ga0070703_100118022	3300005406	Corn, Switchgrass And Miscanthus Rhizosphere	MPKVLVCVFCFEEIETKEKWLDVPGRMNEVAHLKCWKENSRPEVRSRST*
Ga0070705_1010988362	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	MPKVLVCVFCFEEINAKEKWVDVPGRMNEVAHLKCWKENIRPEVRSRSI*
Ga0070694_1000060343	3300005444	Corn, Switchgrass And Miscanthus Rhizosphere	MPKVLVCVFCSEEIEANEKWLDVPGRVNEVAHLKCWKENSRPEVRSRST*
Ga0070708_1016288811	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MPKVLVCVFCSEEIEAQEKWLDVPGRTNEVAHLKCWKENNRPEVRSRST*
Ga0070706_1002995312	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MPKVLVCVFCFEEIETKEKWLDVPGRVNEVAHLKCWKENIRPEVRSRSV*
Ga0070706_1003644763	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MPKVLVCVFCSEEIEVKEKWLDVPGRTNEVAHLKCWKENNRPEVRSRST*
Ga0070707_1012925311	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	MPKVLVCVFCSEEIEAKEKWLDVPGRMNEVAHLKCWKESNRPEVRSRST*
Ga0070698_1009260252	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	MPKVLVCVFCFEEIETKEKWLDVPGRMNEVAHLKCWKENIRPEVRSRSV*
Ga0070698_1017370881	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	MPKALVCVFGSEEIEAQEKWLDLPGRTNEVAHLKCWKENNRFEVRSRST*
Ga0070699_1011669512	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	MCVFCAEEIEAKEKWLDVPGRMNEVAHLKCWKENNRPEVRSRST*
Ga0073909_102718922	3300005526	Surface Soil	VPKVLVCVFCSEEIEAKEKWLDVPGRMNEVAHLKCWKENTRPEVRSRST*
Ga0070664_1001205402	3300005564	Corn Rhizosphere	MPKVSVCVFCSQEIQAKEKWLDVPSRMNEVAHLKCWKESIRPEVRSRSV*
Ga0075023_1000717182	3300006041	Watersheds	MPKVLVCVFCSEEIEAQEKWLNVPGRTNEAAHLKCWKENNRPEVRSRST*
Ga0075024_1001931541	3300006047	Watersheds	MPKVLVCVFCSEEIEAKEKWLDVPGRINEVAHLKCWKESNRPEVRSRST*
Ga0075421_1027660682	3300006845	Populus Rhizosphere	MPKVLVCVFCSEEIAAKEKWLDVPGRMNEVAHLKCWKENSRPEVRTRST*
Ga0075433_103887382	3300006852	Populus Rhizosphere	MPKVLVCAFCFEEIDGMEKWLDVPGRMNEMAHLKCWKENVRPEVRTRSV*
Ga0075425_1007470322	3300006854	Populus Rhizosphere	MPKVLVCVFCFEEIETKEKWLDVPGRMNEVAHLCWKENIRPEVRSRSV*
Ga0099794_100895212	3300007265	Vadose Zone Soil	MPKVLVGVFCSEEIEAQEQWLDVPGRTNEVAHLTCWKENNRPEVCSRST*
Ga0099794_105354111	3300007265	Vadose Zone Soil	VLVCVFCSEEIEAQEKWLDVPGRTNEVAHLKCWKENNRPEVRSRST*
Ga0105106_101865101	3300009078	Freshwater Sediment	MPKVLVCVFCSEEIEEKEKWLDVPGRMNELAHLKCWKESNRPEVRSRSTYS*
Ga0099830_101419292	3300009088	Vadose Zone Soil	MPKVLVGVFCSEEIEAQEKWLDVPGRTNEVAHLTCWKENNRPEVCSRST*
Ga0099830_112625412	3300009088	Vadose Zone Soil	MPKVLVCVFCFEEINAQEKWVDVPGRVNEAAHLKCWKENIRPEVRSRSI*
Ga0099827_106937493	3300009090	Vadose Zone Soil	LVCVFCFEEIGAKEKWVDVPGRMNEVAHLKCWKENIRPEVRSRSI*
Ga0099792_100272573	3300009143	Vadose Zone Soil	MPKVLVGVFCSEEIEAQEQWLDVPGRTNEVAHLTCWKENNRPEVRSRST*
Ga0099792_101660381	3300009143	Vadose Zone Soil	MPKVLVCVLCSEEIEAQEKWLDVPGRTNEVAHLKCWKENNRPEVRSRST*
Ga0114129_127447712	3300009147	Populus Rhizosphere	MPKVLVCVFCSQEIDAEEKWLDVPGKGNEVAHLNCWKESNRPEVRTRSL*
Ga0105101_102655962	3300009171	Freshwater Sediment	MCGFCSEEIEEKEKWLDVPGRMNELAHLKCWKESNRPEVRSRSTYS*
Ga0105063_10399202	3300009804	Groundwater Sand	CHMPKVLVCVFCLEEINVKEKWLDVPGRVNDVAHLKCWKENIRPEVRSRST*
Ga0105076_10208573	3300009816	Groundwater Sand	MPKVLVCVFCSEEIEVKEKWLDVPGRMNEVAHLKCWKENNRPEVRSRSV*
Ga0105058_11231132	3300009837	Groundwater Sand	FCSEEIEAKEKWLDVPGRMNEVAHLKCWKENNRPEVRSRST*
Ga0099796_101846991	3300010159	Vadose Zone Soil	FCSEEIEAQEKWLDVPGRTNEVAHLTCWKENNRPEVRSRST*
Ga0136847_127011552	3300010391	Freshwater Sediment	MPKVLVCVFCSEEIEAKEKWLDVPGRVNEAAHLKCWKENNRPEVRSRST*
Ga0134122_110681101	3300010400	Terrestrial Soil	ARRTRRCSMPKVLVCVFCSDEISDEEKCLDVPGKVNEVAHLKCWKENNRPEVRSRST*
Ga0134122_123994521	3300010400	Terrestrial Soil	TRRSCHMPKVLVCVFCSEEIEAQEKWLDVPGRTNEVVHLKCWKENNRPEVRSRST*
Ga0150983_159419101	3300011120	Forest Soil	RRGHMPKVLVCAFCFEEIDGMEKWLDVPGRMNEAAHLKCWKENVRPEVRTRSV*
Ga0137391_105083442	3300011270	Vadose Zone Soil	MPKVLVGVFCSEEIEAQEQWLDVPGRTNEVAHLTCWKENNRHEVCSRST*
Ga0137393_113216061	3300011271	Vadose Zone Soil	MPKVLVCVFCSEEIEPKEQWLDVPGRTNEVAHLTCGKENNRPEVCSRST*
Ga0137453_10192832	3300012034	Soil	MPKVLVCVFCSDEISAEEKCLDVPGKMNEVAHLKCWKENNRPEVRSRST*
Ga0137338_11024442	3300012174	Soil	MPKVLVCVFCSEEIEEKEKWLDVPGRMNELAHLKCWKESNRPEVRSRST*
Ga0137388_100642758	3300012189	Vadose Zone Soil	MPKVLVCLFCSEEIEAQEKWLDVPGRTNEVAHLKCWKENNRPEVRSRST*
Ga0137383_110746631	3300012199	Vadose Zone Soil	VCVFCSEEIEAQEKWLDVPGRTNEVAHLKCWKENNRPEVRSRST*
Ga0137399_101665393	3300012203	Vadose Zone Soil	MPKVLVGVFCSEEIEAQEKWLDVPGRTNEVAHLKCWKENNRPEVRSRST*
Ga0137362_102012691	3300012205	Vadose Zone Soil	CHMPKVLVCVFCSEEIEAQEKWLDVPGRTNEVAHLKCWKENNRPEVRSRST*
Ga0137369_107142382	3300012355	Vadose Zone Soil	MPKVLVRVFCSEEIEAKEKWLDVPGRMNEVAHLKCWKENSRPEVRSCST*
Ga0137358_105551291	3300012582	Vadose Zone Soil	FCSEEIEAQEKWLDVPGRTNEVAHLKCWKENNRPEVRSRST*
Ga0137398_111259591	3300012683	Vadose Zone Soil	MPKVLVCVFCSEEIEAQEKWLDVPGRTNEVAHLTCWKENNRPEVRSRST*
Ga0137397_100473161	3300012685	Vadose Zone Soil	AQEKWLDVPGRTNEVAHLKCWKENNRPEVRSRST*
Ga0137395_111981381	3300012917	Vadose Zone Soil	MPKVLVCVFCSEEIEVKEKWLDVPGRTNEVAHLKCWKENNRPEVR
Ga0137359_102872673	3300012923	Vadose Zone Soil	VLVCVFCSEEIEAQEKWLDVPGRTNEVAHLKCWKESNRPEVRSRST*
Ga0164299_114145711	3300012958	Soil	VCVFCSEEIEAQEKWLDVPGRTNEVAHLKCWKESNRPEVRSRST*
Ga0164301_102515682	3300012960	Soil	MPKVSVCVFCSQEIQAKEKWLDVPSRMNEVAHLKCWKESIPPEVRSRSV*
Ga0137418_100571924	3300015241	Vadose Zone Soil	MPKVLVCVFCSEEIEEKEKWLDVPGRINELAHLKCWNESNRPEVRSRST*
Ga0180085_11137442	3300015259	Soil	VLVCVFCVEEIGPEEKWLDVPGKVNEIAHLKCWKDNMRPEVRSRSV*
Ga0132258_1000479412	3300015371	Arabidopsis Rhizosphere	MHNVEVNREVHMPKVIVCVFCSQEIDANEKWLDVPGRANEVAHLNCWKESNRPEVRTRSL
Ga0184638_11163902	3300018052	Groundwater Sediment	MPKVLVCVFCSEEIEEKEKWLDVPGRINELAHLKCWKESNRPEVRSRST
Ga0184637_100429322	3300018063	Groundwater Sediment	MPKVLVCVFCFEEINVKEKWLDVPGRVNDVAHLKCWKENIRPEVRSRST
Ga0184618_101594722	3300018071	Groundwater Sediment	MPKILVCVFCSDEISTEEKCLDVPGKMNEIAHLKCWKENNRPEVRSRST
Ga0184633_106213291	3300018077	Groundwater Sediment	MPKVLVCVFCAEEIGTEEKWLDVPGRVNDVAHLKCWKENIRPEVRSRST
Ga0184612_105279391	3300018078	Groundwater Sediment	CSEEIEAEEKWLDVPGKMNELAHLKCWKESNRPEVRSRST
Ga0184629_101972032	3300018084	Groundwater Sediment	MPKVLVCVFCAEEIGPEEKWLDVPGKVNEIAHLKCWKDNMRPEVRSRSV
Ga0190265_110990492	3300018422	Soil	MPKVLVCVFCSEEIAAEEKWLDVPGRGSEVAHLKCWKDSNRPEVRSRSV
Ga0190265_116786532	3300018422	Soil	MPKVLVCIFCSEEIETEEKWLDVPDKMNEVAHLKCWKENNRPEVRSRST
Ga0190270_132388301	3300018469	Soil	MPKVLVCIFCSEEIEEKEKWLDVPGRMNELAHLKCWKESNRPEVRSRST
Ga0193722_10886182	3300019877	Soil	MPKVLACVFCSEEIEAQEKWLDVPGRTNEVAHLKCWKENNRPEVRSRST
Ga0193723_10159733	3300019879	Soil	MPKVLVCVFCSQEIEEKEKWLDVPGRINELAHLKCWKESNRPEVRSRST
Ga0193707_10872853	3300019881	Soil	MPKVLVCVFCSEEIEAQEKWLDVPGRTNEVAHLKCWKENNRPEVRSRST
Ga0193713_11983301	3300019882	Soil	MPKVLVCVFCSEEIEAKEKWLDVPGRVNEAAHLKCWKENNRPEVRSRST
Ga0193729_12134911	3300019887	Soil	MPKVLVCVFCSEEIEAQEKWLDVPGKMNEVAHLKCWKENNRPEVRSRST
Ga0210407_110391881	3300020579	Soil	RRHMPKVLVCVFCFEEIAMEEKWLDVPGRMNEVAHLKCWKDHSRPEVRSRSI
Ga0210403_103080063	3300020580	Soil	FCFEEIAMEEKWLDVPGRMNEVAHLKCWKDHSRPEVRSRSI
Ga0210403_105153363	3300020580	Soil	MPKVLVCVFCFEEIAMEEKWLDVPGRMNEVAHLKCWKDHSRPEVRSRSI
Ga0210379_102680982	3300021081	Groundwater Sediment	MPKVLVCVFCAEEIGTEEKWLDVPGKVNEIAHLKCWKDNMRPEVRSRSV
Ga0210408_105002222	3300021178	Soil	MPKVLVCVFGSEEIEAQEKWLDVPGRTNEGAHLKSWKENNRLEIRSRST
Ga0210384_100010946	3300021432	Soil	MPKVVVCVFCSEEIEAKEQWLDVPGRMNDVAHLTCWKENSRPEVRSRST
Ga0210384_101365833	3300021432	Soil	MPKVLVCVFCFEEIETKEKWLDVPGRMNEVAHLKCWKENIRPEVRSRSV
Ga0209109_101597882	3300025160	Soil	MPKVLVCVFCSEEIEAKEKWLDVPGRMNELAHLKCWKESNRPEVRSRST
Ga0209108_102563372	3300025165	Soil	MPKVLVCVFCSEEIEAKEKWLDVPGRMNEVAHLKCWKENSRPEVRSRST
Ga0209640_105524172	3300025324	Soil	MPKVLVCVFCSEEIEAKEKWLDVPGRMNEVAHLKCWKESNRPEVRSRST
Ga0207653_100629092	3300025885	Corn, Switchgrass And Miscanthus Rhizosphere	MPKVLVCVFCFEEIETKEKWLDVPGRMNEVAHLKCWKENSRPEVRSRST
Ga0207684_1000227510	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MPKVLVCVFCFEEINAKEKWVDVPGRMNEVAHLKCWKENIRPEVRSRSI
Ga0207684_100134412	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MPKVLVCVFCSEEIEVKEKWLDVPGRTNEVAHLKCWKENNRPEVRSRST
Ga0207684_102090512	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MPKVLVCVFCFEEIETKEKWLDVPGRVNEVAHLKCWKENIRPEVRSRSV
Ga0207684_102413803	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MPKVLVCVFCSEEIEAQEKWLDVPGRTNEVAHLKCWKESNRPEVRSRST
Ga0207646_1001114415	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	MPKVLVCVFCAEEIEAKEKWLDVPSRMNEVAHLKCWKENNRPEVRSRST
Ga0207646_102454372	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	MCVFCAEEIEAKEKWLDVPGRMNEVAHLKCWKENNRPEVRSRST
Ga0207646_109942771	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	MPKVLVRLFCSEEIEAQEKWLDGPGRTNEVAHLKCWKENNRPEVRSRST
Ga0257152_10001155	3300026369	Soil	MPKVLVCVLCSEEIEAQEKWLDVPGRTNEVAHLKCWKENNRPEVRSRST
Ga0257155_10452962	3300026481	Soil	MPKVLVCVFCFEEIEAQEKWLDVPGRTNEVAHLTCWKENNRPEVRSRST
Ga0257155_10606822	3300026481	Soil	MPKVLVCVFCSEEIEAQEKWLDVPGRTNEVAHLTCWKENNRPEVRSRS
Ga0257172_10275242	3300026482	Soil	MPKVLVCVFGSEEIEAQEKWLDVPGRTNEVAHLKCWKENNRPEVRSRST
Ga0257157_10239073	3300026496	Soil	MPKVLVCLFCSEEIEAQEKWLDVPGRTNEVAHLKCWKENNRPEVRSRST
Ga0209648_104149653	3300026551	Grasslands Soil	MPKVLVGVFCSEEIEAQEQWLDVPGRTNEVAHLTCWKENNRPEVCSRST
Ga0209884_10083462	3300027013	Groundwater Sand	MPKVLVCVFCSEEIEVKEKWLDVPGRMNEVAHLKCWKENNRPEVRSRSV
Ga0209886_10841312	3300027273	Groundwater Sand	VCVFCLEEINVKEKWLDVPGRVNDVAHLKCWKENIRPEVRSRST
Ga0209846_10300842	3300027277	Groundwater Sand	MPKVLVCVFCLEEINVKEKWLDVPGRVNDVAHLKCWKENIRPEVRSRST
Ga0209388_11459072	3300027655	Vadose Zone Soil	PKVLVCVFCSEEIEAQEKWLDVPGRTNEVAHLKCWKENNRPEVRSRST
Ga0209328_100289732	3300027727	Forest Soil	MPKVLVCVFGSEEFEAQEKWLDVPGRTNEGAHLKSWKENNRLEIRSRST
Ga0209328_102752672	3300027727	Forest Soil	MPKVLVCVFCFEEIDGMEKWIDAPGRMNEVAHLKCWKENVRPEVRTRSV
Ga0209706_101513721	3300027818	Freshwater Sediment	MPKVLVCVFCSEEIEEKEKWLDVPGRMNELAHLKCWKESNRPEVRSRST
Ga0209590_104381233	3300027882	Vadose Zone Soil	CFEEIGAKEKWVDVPGRMNEVAHLKCWKENIRPEVRSRSI
Ga0209068_100008872	3300027894	Watersheds	MPKVLVCVFCSEEIEAQEKWLNVPGRTNEAAHLKCWKENNRPEVRSRST
Ga0209488_112330702	3300027903	Vadose Zone Soil	FCSEEIEAQEKWLDVPGRTNEVAHLKCWKENNRPEVRSRST
Ga0209382_103947503	3300027909	Populus Rhizosphere	MPKVSVCVFCSQEIQAKEKWLDVPSRMNEVAHLKCWKESIRPEVRSRSV
Ga0209069_100398342	3300027915	Watersheds	MPKVLVCVFCFEEIETKEKWLDVPGRMNEVAHLKCWMENSRPEVRSRST
Ga0209069_102031521	3300027915	Watersheds	MPKVLVCVFCSEEIEAKEKWLDVPGRINEVAHLKCWKESNRPEVRSRST
Ga0307504_101674431	3300028792	Soil	MPKVLVCIFCSEEIEAKEKWLDVPGRMNEVAHLKCWKENSRPEVRSRST
Ga0222749_100189204	3300029636	Soil	MPKVLVCVFGSEEIEAQEKWLDVLGRTNEVAHLKCWKENNRPEVRSRST
Ga0299907_101790373	3300030006	Soil	MPKVLVCVFCSEEIEEKEKWLDVPGRINELAHLKCWKESNRPEVRSRSI
Ga0308178_10208071	3300030990	Soil	MPKILVCVFCSDEISAEEKCLDVPGKMNEVAHLKCWKENNRPEVRSRST
Ga0307469_110655822	3300031720	Hardwood Forest Soil	MPKVLVCVFCSEEIGAKEKWLDVPGRMSETAHLKCWKENNRPEVRSRST
Ga0214473_100474765	3300031949	Soil	MPKVLVCVFCFEEINTKEKWLDVPGRVNEVAHLKCWKENMRPEVRSRSI
Ga0310899_103117191	3300032017	Soil	EEIEAAEKWLDVPGRGNEVAHLSCWKENNRPEVRSRSL
Ga0307471_1010496942	3300032180	Hardwood Forest Soil	MPKVLVCVFCSEEIEAEEKWLEVPGRGNEVAHLKCWKESNRPEVRSRSL
Ga0307472_1009334871	3300032205	Hardwood Forest Soil	RGRWAQRTRRYNMPKVLVCVFCFEEIETKEKWLDVPGRMNEVAHLKCWKENSRPEVRSRS
Ga0326726_100114797	3300033433	Peat Soil	MPKVLVCVFCSEEIEAKEKWLDVPGKLNEVAHLKCWKENIRPEVRTRST
Ga0326726_100397857	3300033433	Peat Soil	MPKVLVCVFCSEEIEANEKWLDVPGRVNEVAHLKCWKENSRPEVRSRST
Ga0326726_101438482	3300033433	Peat Soil	MPKVLVCVFCSEEIETKEKWLDVPGRMNEVAHLKCWKENSRPEVRSRST
Ga0316624_115688171	3300033486	Soil	MPKVLVCVFCSEEIEAKEKWLDVPGKLNEVAHLKCWKENSRPEVRTRST

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F063437

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences