Metagenome Family F063360

Basic Information
Family ID	F063360
Family Type	Metagenome
Number of Sequences	129
Average Sequence Length	46 residues
Representative Sequence	MFVAEFREDVRITIPAIAERLKDSDRYVRSAAIELLSRLAAQGMC
Number of Associated Samples	13
Number of Associated Scaffolds	98

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	48.06 %
% of genes near scaffold ends (potentially truncated)	40.31 %
% of genes from short scaffolds (< 2000 bps)	70.54 %
Associated GOLD sequencing projects	7
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.58

Most Common Taxonomy
Group	Unclassified (81.395 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (100.000 % of family members)
Environment Ontology (ENVO)	Unclassified (66.667 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (100.000 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 53.42% β-sheet: 0.00% Coil/Unstructured: 46.58%
Feature Viewer

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Pfam ID	Name	% Frequency in 98 Family Scaffolds
PF02985	HEAT	40.82
PF08031	BBE	2.04
PF16879	Sin3a_C	1.02
PF12765	Cohesin_HEAT	1.02
PF00023	Ank	1.02
PF06245	DUF1015	1.02
PF12717	Cnd1	1.02
PF04005	Hus1	1.02
PF00227	Proteasome	1.02

COG ID	Name	Functional Category	% Frequency in 98 Family Scaffolds
COG0277	FAD/FMN-containing lactate dehydrogenase/glycolate oxidase	Energy production and conversion [C]	2.04
COG0638	20S proteasome, alpha and beta subunits	Posttranslational modification, protein turnover, chaperones [O]	1.02
COG3484	Predicted proteasome-type protease	Posttranslational modification, protein turnover, chaperones [O]	1.02
COG4198	Uncharacterized conserved protein, DUF1015 family	Function unknown [S]	1.02
COG5405	ATP-dependent protease HslVU (ClpYQ), peptidase subunit	Posttranslational modification, protein turnover, chaperones [O]	1.02

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	81.40 %
All Organisms	root	All Organisms	18.60 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	81.40 %
cellular organisms	root	All Organisms → cellular organisms	17.83 %
Viruses	superkingdom	All Organisms → Viruses	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	81.40 %
Eukaryota	superkingdom	All Organisms → cellular organisms → Eukaryota	17.83 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	81.40 %
Opisthokonta	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta	16.28 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	81.40 %
Fungi	kingdom	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi	16.28 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	81.40 %
Dikarya	subkingdom	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya	16.28 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	81.40 %
Basidiomycota	phylum	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Basidiomycota	16.28 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	81.40 %
Agaricomycotina	subphylum	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Basidiomycota → Agaricomycotina	16.28 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	81.40 %
Agaricomycetes	class	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Basidiomycota → Agaricomycotina → Agaricomycetes	14.73 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	81.40 %
Agaricomycetidae	subclass	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Basidiomycota → Agaricomycotina → Agaricomycetes → Agaricomycetidae	8.53 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	81.40 %
Agaricales	order	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Basidiomycota → Agaricomycotina → Agaricomycetes → Agaricomycetidae → Agaricales	8.53 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	81.40 %
Mycenaceae	family	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Basidiomycota → Agaricomycotina → Agaricomycetes → Agaricomycetidae → Agaricales → Mycenaceae	8.53 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	81.40 %
Mycena	genus	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Basidiomycota → Agaricomycotina → Agaricomycetes → Agaricomycetidae → Agaricales → Mycenaceae → Mycena	8.53 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	81.40 %
Mycena sanguinolenta	species	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Basidiomycota → Agaricomycotina → Agaricomycetes → Agaricomycetidae → Agaricales → Mycenaceae → Mycena → Mycena sanguinolenta	2.33 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.78 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300007788\|Ga0099795_10016066	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Basidiomycota → Agaricomycotina → Agaricomycetes	2359	Open in IMG/M
3300007788\|Ga0099795_10016066	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Basidiomycota → Agaricomycotina → Agaricomycetes	2359	Open in IMG/M
3300007788\|Ga0099795_10018449	Not Available	2243	Open in IMG/M
3300007788\|Ga0099795_10018449	Not Available	2243	Open in IMG/M
3300007788\|Ga0099795_10018449	Not Available	2243	Open in IMG/M
3300007788\|Ga0099795_10018449	Not Available	2243	Open in IMG/M
3300007788\|Ga0099795_10042981	Not Available	1615	Open in IMG/M
3300007788\|Ga0099795_10047734	Not Available	1548	Open in IMG/M
3300007788\|Ga0099795_10050409	Not Available	1514	Open in IMG/M
3300007788\|Ga0099795_10050409	Not Available	1514	Open in IMG/M
3300007788\|Ga0099795_10051347	Not Available	1503	Open in IMG/M
3300007788\|Ga0099795_10066381	Not Available	1351	Open in IMG/M
3300007788\|Ga0099795_10109426	Not Available	1093	Open in IMG/M
3300007788\|Ga0099795_10165459	Not Available	915	Open in IMG/M
3300007788\|Ga0099795_10209809	Not Available	825	Open in IMG/M
3300007788\|Ga0099795_10254462	Not Available	758	Open in IMG/M
3300007788\|Ga0099795_10297297	Not Available	709	Open in IMG/M
3300007788\|Ga0099795_10298925	Not Available	707	Open in IMG/M
3300007788\|Ga0099795_10362540	Not Available	651	Open in IMG/M
3300007788\|Ga0099795_10395348	Not Available	627	Open in IMG/M
3300007788\|Ga0099795_10411887	Not Available	616	Open in IMG/M
3300007788\|Ga0099795_10412957	Not Available	615	Open in IMG/M
3300007788\|Ga0099795_10474601	Not Available	579	Open in IMG/M
3300007788\|Ga0099795_10474601	Not Available	579	Open in IMG/M
3300007788\|Ga0099795_10481820	Not Available	576	Open in IMG/M
3300007788\|Ga0099795_10590860	Not Available	527	Open in IMG/M
3300009143\|Ga0099792_10015220	Not Available	3329	Open in IMG/M
3300009143\|Ga0099792_10044658	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Basidiomycota → Agaricomycotina → Agaricomycetes → Agaricomycetidae → Agaricales → Mycenaceae → Mycena → Mycena sanguinolenta	2132	Open in IMG/M
3300009143\|Ga0099792_10107593	Not Available	1476	Open in IMG/M
3300009143\|Ga0099792_10156884	Not Available	1259	Open in IMG/M
3300009143\|Ga0099792_10193397	Not Available	1152	Open in IMG/M
3300009143\|Ga0099792_10193397	Not Available	1152	Open in IMG/M
3300009143\|Ga0099792_10193397	Not Available	1152	Open in IMG/M
3300009143\|Ga0099792_10214533	Not Available	1102	Open in IMG/M
3300009143\|Ga0099792_10224315	Not Available	1081	Open in IMG/M
3300009143\|Ga0099792_10667233	Not Available	669	Open in IMG/M
3300009143\|Ga0099792_10667233	Not Available	669	Open in IMG/M
3300009143\|Ga0099792_10839271	Not Available	604	Open in IMG/M
3300009143\|Ga0099792_11007673	Not Available	557	Open in IMG/M
3300010159\|Ga0099796_10020954	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Basidiomycota → Agaricomycotina → Agaricomycetes → Agaricomycetidae → Agaricales → Mycenaceae → Mycena → Mycena sanguinolenta	2006	Open in IMG/M
3300010159\|Ga0099796_10051727	Not Available	1428	Open in IMG/M
3300010159\|Ga0099796_10099937	Not Available	1090	Open in IMG/M
3300010159\|Ga0099796_10202039	Not Available	807	Open in IMG/M
3300010159\|Ga0099796_10202039	Not Available	807	Open in IMG/M
3300010159\|Ga0099796_10310530	Not Available	670	Open in IMG/M
3300010159\|Ga0099796_10447896	Not Available	574	Open in IMG/M
3300010159\|Ga0099796_10462625	Not Available	565	Open in IMG/M
3300010159\|Ga0099796_10578016	Not Available	506	Open in IMG/M
3300010159\|Ga0099796_10590848	Not Available	500	Open in IMG/M
3300012683\|Ga0137398_10670384	Not Available	720	Open in IMG/M
3300012924\|Ga0137413_11552044	Not Available	540	Open in IMG/M
3300012944\|Ga0137410_11145859	Not Available	667	Open in IMG/M
3300015052\|Ga0137411_1245403	Not Available	1230	Open in IMG/M
3300015242\|Ga0137412_10573744	Not Available	857	Open in IMG/M
3300015245\|Ga0137409_10641187	Not Available	894	Open in IMG/M
3300015245\|Ga0137409_10806376	Not Available	774	Open in IMG/M
3300015245\|Ga0137409_11319309	Not Available	565	Open in IMG/M
3300020140\|Ga0179590_1000457	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Basidiomycota → Agaricomycotina → Agaricomycetes → Agaricomycetidae → Agaricales → Mycenaceae → Mycena	5063	Open in IMG/M
3300020140\|Ga0179590_1000457	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Basidiomycota → Agaricomycotina → Agaricomycetes → Agaricomycetidae → Agaricales → Mycenaceae → Mycena	5063	Open in IMG/M
3300020140\|Ga0179590_1000619	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Basidiomycota → Agaricomycotina → Agaricomycetes → Agaricomycetidae → Agaricales → Mycenaceae → Mycena	4679	Open in IMG/M
3300020140\|Ga0179590_1000619	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Basidiomycota → Agaricomycotina → Agaricomycetes → Agaricomycetidae → Agaricales → Mycenaceae → Mycena	4679	Open in IMG/M
3300020140\|Ga0179590_1000619	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Basidiomycota → Agaricomycotina → Agaricomycetes → Agaricomycetidae → Agaricales → Mycenaceae → Mycena	4679	Open in IMG/M
3300020140\|Ga0179590_1000619	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Basidiomycota → Agaricomycotina → Agaricomycetes → Agaricomycetidae → Agaricales → Mycenaceae → Mycena	4679	Open in IMG/M
3300020140\|Ga0179590_1010085	Not Available	2012	Open in IMG/M
3300020140\|Ga0179590_1011478	Not Available	1922	Open in IMG/M
3300020140\|Ga0179590_1011478	Not Available	1922	Open in IMG/M
3300020140\|Ga0179590_1014148	Not Available	1782	Open in IMG/M
3300020140\|Ga0179590_1014677	Not Available	1757	Open in IMG/M
3300020140\|Ga0179590_1014677	Not Available	1757	Open in IMG/M
3300020140\|Ga0179590_1014677	Not Available	1757	Open in IMG/M
3300020140\|Ga0179590_1021731	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Basidiomycota → Agaricomycotina → Agaricomycetes → Agaricomycetidae → Agaricales → Mycenaceae → Mycena	1515	Open in IMG/M
3300020140\|Ga0179590_1059554	Not Available	995	Open in IMG/M
3300020140\|Ga0179590_1059554	Not Available	995	Open in IMG/M
3300020140\|Ga0179590_1093343	Not Available	807	Open in IMG/M
3300020140\|Ga0179590_1139404	Not Available	661	Open in IMG/M
3300020140\|Ga0179590_1139404	Not Available	661	Open in IMG/M
3300020140\|Ga0179590_1139404	Not Available	661	Open in IMG/M
3300020140\|Ga0179590_1170216	Not Available	597	Open in IMG/M
3300020140\|Ga0179590_1170216	Not Available	597	Open in IMG/M
3300020140\|Ga0179590_1179076	Not Available	581	Open in IMG/M
3300020140\|Ga0179590_1194883	Not Available	555	Open in IMG/M
3300020140\|Ga0179590_1195492	Not Available	554	Open in IMG/M
3300024288\|Ga0179589_10001059	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Basidiomycota → Agaricomycotina → Agaricomycetes → Agaricomycetidae → Agaricales → Mycenaceae → Mycena → Mycena sanguinolenta	5722	Open in IMG/M
3300024288\|Ga0179589_10001397	Not Available	5273	Open in IMG/M
3300024288\|Ga0179589_10015303	Not Available	2414	Open in IMG/M
3300024288\|Ga0179589_10028351	Not Available	1939	Open in IMG/M
3300024288\|Ga0179589_10055709	Not Available	1503	Open in IMG/M
3300024288\|Ga0179589_10066254	Not Available	1403	Open in IMG/M
3300024288\|Ga0179589_10172814	Not Available	932	Open in IMG/M
3300024288\|Ga0179589_10215319	Not Available	844	Open in IMG/M
3300024288\|Ga0179589_10224356	Not Available	828	Open in IMG/M
3300024288\|Ga0179589_10421313	Not Available	613	Open in IMG/M
3300024288\|Ga0179589_10452198	Not Available	592	Open in IMG/M
3300024288\|Ga0179589_10618216	Not Available	508	Open in IMG/M
3300027512\|Ga0209179_1007930	Not Available	1771	Open in IMG/M
3300027512\|Ga0209179_1050538	Not Available	890	Open in IMG/M
3300027512\|Ga0209179_1062348	Not Available	810	Open in IMG/M
3300027512\|Ga0209179_1078639	Not Available	726	Open in IMG/M
3300027512\|Ga0209179_1088357	Not Available	686	Open in IMG/M
3300027512\|Ga0209179_1141493	Not Available	537	Open in IMG/M
3300027512\|Ga0209179_1150426	Not Available	520	Open in IMG/M
3300027903\|Ga0209488_10000232	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Basidiomycota → Agaricomycotina → Agaricomycetes	44678	Open in IMG/M
3300027903\|Ga0209488_10000232	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Basidiomycota → Agaricomycotina → Agaricomycetes	44678	Open in IMG/M
3300027903\|Ga0209488_10000232	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Basidiomycota → Agaricomycotina → Agaricomycetes	44678	Open in IMG/M
3300027903\|Ga0209488_10000813	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Basidiomycota → Agaricomycotina → Agaricomycetes	26506	Open in IMG/M
3300027903\|Ga0209488_10002062	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Basidiomycota → Agaricomycotina → Agaricomycetes	16888	Open in IMG/M
3300027903\|Ga0209488_10004565	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Basidiomycota → Agaricomycotina	10783	Open in IMG/M
3300027903\|Ga0209488_10004565	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Basidiomycota → Agaricomycotina	10783	Open in IMG/M
3300027903\|Ga0209488_10014087	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Basidiomycota → Agaricomycotina → Agaricomycetes	5833	Open in IMG/M
3300027903\|Ga0209488_10014222	Not Available	5806	Open in IMG/M
3300027903\|Ga0209488_10014222	Not Available	5806	Open in IMG/M
3300027903\|Ga0209488_10014222	Not Available	5806	Open in IMG/M
3300027903\|Ga0209488_10026257	Not Available	4233	Open in IMG/M
3300027903\|Ga0209488_10026257	Not Available	4233	Open in IMG/M
3300027903\|Ga0209488_10026257	Not Available	4233	Open in IMG/M
3300027903\|Ga0209488_10031530	All Organisms → cellular organisms → Eukaryota	3863	Open in IMG/M
3300027903\|Ga0209488_10031530	All Organisms → cellular organisms → Eukaryota	3863	Open in IMG/M
3300027903\|Ga0209488_10041439	All Organisms → Viruses → Predicted Viral	3374	Open in IMG/M
3300027903\|Ga0209488_10046947	Not Available	3176	Open in IMG/M
3300027903\|Ga0209488_10073439	Not Available	2537	Open in IMG/M
3300027903\|Ga0209488_10121120	Not Available	1969	Open in IMG/M
3300027903\|Ga0209488_10176781	Not Available	1611	Open in IMG/M
3300027903\|Ga0209488_10316832	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Basidiomycota → Agaricomycotina → Agaricomycetes → Agaricomycetidae → Agaricales → Mycenaceae → Mycena	1163	Open in IMG/M
3300027903\|Ga0209488_10370111	Not Available	1063	Open in IMG/M
3300027903\|Ga0209488_10370111	Not Available	1063	Open in IMG/M
3300027903\|Ga0209488_10370111	Not Available	1063	Open in IMG/M
3300027903\|Ga0209488_10644098	Not Available	764	Open in IMG/M
3300027903\|Ga0209488_10912372	Not Available	615	Open in IMG/M
3300027903\|Ga0209488_10938783	Not Available	604	Open in IMG/M

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	100.00%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	100.00%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	100.00%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	100.00%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	100.00%

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300007788	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2	Environmental	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300010159	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3	Environmental	Open in IMG/M
3300012683	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaG	Environmental	Open in IMG/M
3300012924	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300015052	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300015242	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015245	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300020140	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300024288	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_08_16fungal	Environmental	Open in IMG/M
3300027512	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2 (SPAdes)	Environmental	Open in IMG/M
3300027903	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)	Environmental	Open in IMG/M

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0099795_100160661	3300007788	Vadose Zone Soil	MILAEFREDIRITIPAIAEGLNRSHFDARKAAIKLLSVLATQGMC*
Ga0099795_100160662	3300007788	Vadose Zone Soil	MIVAEFRGDIRITIPAIVDRLKDSDSAVRKAAIKGVLRLAAHGVC*
Ga0099795_100184491	3300007788	Vadose Zone Soil	MFVAEFWEDIRIIFPAIVEHLHDSDHDIHSAAIELLSELAAQGVC*
Ga0099795_100184496	3300007788	Vadose Zone Soil	VLKESVAEFREEIRMTIPAIAEHLTDSKWDVRPAAIELLSRLVAQGLC*
Ga0099795_100184497	3300007788	Vadose Zone Soil	VCSSTFVAEFRDDIRIAIPAIAEHLKDSDWHVRKEVIELLSTLEAQGIC*
Ga0099795_100184499	3300007788	Vadose Zone Soil	WVCSSIFIAEFREDIRTTIPAIMGHLKDSNLYVRSAAIEHVTMLAAKGMC*
Ga0099795_100429811	3300007788	Vadose Zone Soil	FWEDVRIAVPAIAQCLKDFDWHVRSAAIGVLSRLAAQGMC*
Ga0099795_100477341	3300007788	Vadose Zone Soil	VFVAEFRKDVQITIRAIAEGVKNSHRYLRQAAIEILSRLAAQ
Ga0099795_100504093	3300007788	Vadose Zone Soil	VCSNTFVADFREDIPITIPAMAEHLKDSDLYVREAAIEGVLRMAAQGMC*
Ga0099795_100504095	3300007788	Vadose Zone Soil	MFVAEFQEDVPISTIAEHLKDSDMYVRKTVIEGVSMLAAQGMC*
Ga0099795_100513471	3300007788	Vadose Zone Soil	MFVAEFQEDVRITIPAIAEHLKNSHFGIRKAAIEGVSRLAEQGMCS
Ga0099795_100663813	3300007788	Vadose Zone Soil	EFWDDVRIAIPAIAEYLKDSHSDVLKAAIEGVSRLAVQGI*
Ga0099795_101094263	3300007788	Vadose Zone Soil	MLVAEFREDIRIAIPAIAECLKDFDSDVCKAAIELLSRLAMQGMC*
Ga0099795_101654591	3300007788	Vadose Zone Soil	FVAEFREDIRITIPAIVGYLKDSDWHVRNAAIEFLSRVALRGMC*
Ga0099795_102098092	3300007788	Vadose Zone Soil	MTVAEFREGVRITIPVIAEGLKHFDSDVRKTAIVGVSRLAVQGMC*
Ga0099795_102544621	3300007788	Vadose Zone Soil	EDIRITIPAIVEHLKDSNSHVCSAAIKVLSRLAAQGMY*
Ga0099795_102972971	3300007788	Vadose Zone Soil	VYSSTVVAEFQEDVRITIPVIAERLKDFHDGGDVRSAAIELLSRLAGQGMC*
Ga0099795_102989251	3300007788	Vadose Zone Soil	SITLWWECSSMFVAEFLEDVRIMIPAIAEHLKNSDFYVHKAAIRLLSKLAVQGMF*
Ga0099795_103625401	3300007788	Vadose Zone Soil	QFREDVRITIPAVTECLKDSHSDVCKAVIELLSRLRAQGMC*
Ga0099795_103953482	3300007788	Vadose Zone Soil	SGCAQAYFLADFLEDIRIIVPVIAEHLKSSYWYVRNVAIELLSRLAAQGMC*
Ga0099795_104118871	3300007788	Vadose Zone Soil	MSITLRWVCSMFVAEFREDVRITIPAIAEGLKNSGQYPLSAAIELLSGLAAQGMC*
Ga0099795_104129572	3300007788	Vadose Zone Soil	CVSITLRWVCSSVFVAEFREDVRITIPAIAERLKDSESGVRSAAIGLLSRLTAQGMC*
Ga0099795_104746011	3300007788	Vadose Zone Soil	MFVAEFQEDIRITIPAIAECLKDSHSHIREVAIKL
Ga0099795_104746012	3300007788	Vadose Zone Soil	VRITIPAIADRLKDSHWYVRKAAITHLSWLAAQGMC*
Ga0099795_104818201	3300007788	Vadose Zone Soil	AEFREDIRTTIPAIAEHLKDSDSHVHKAAIEGLSMLAAQGMR*
Ga0099795_105908601	3300007788	Vadose Zone Soil	MFVAKFREDVWITIPAIAERLKASDRYVRSAAIEILSGLAVQGMCK
Ga0099792_100152201	3300009143	Vadose Zone Soil	ACSSMFVAEFREDVRIIVLGIAEHLKNSDWYVRNAAIEFLSRLAAQGMC*
Ga0099792_100446582	3300009143	Vadose Zone Soil	MFVVAGLREDVRITIPAIAERLKDPDSHVRSEAIGVLSRLAAQGMC*
Ga0099792_101075933	3300009143	Vadose Zone Soil	MFVAEFQEDIQTVISVIAEHLKDSDPEVRLAAIGILSGLAAQGMC*
Ga0099792_101568843	3300009143	Vadose Zone Soil	MLVAEFWEDIRTVIPAIAECLKGFDSDVCKAAIELLSRLAMQGMC*
Ga0099792_101933971	3300009143	Vadose Zone Soil	MFVAEFREDVWITIPTIAEHLKDSDSGVRKAASEGVSRLAAQGMC*
Ga0099792_101933972	3300009143	Vadose Zone Soil	MFVAEFQEEVRIAIPAIAEHLKDSDYDVRKAAIKLVSILAVQSMC*
Ga0099792_101933974	3300009143	Vadose Zone Soil	MLVAEFREEVRIAIPSIAEHLKDSDSDVRKAAIKLVSGLAAQGMC*
Ga0099792_102145335	3300009143	Vadose Zone Soil	IAIPAIAERLKISDRYVRKAAIEVLSRLAAQGMF*
Ga0099792_102243151	3300009143	Vadose Zone Soil	MFEAEFREDVRITIPAIVGRLKDFDSDVRKAAIEGLSTLAGLGMC*
Ga0099792_106672331	3300009143	Vadose Zone Soil	RVCVSITLQWVYSSTVVAEFRGNVQITIPVIAERLKDSDSEIRTAAIVGLSRMAAQGLC*
Ga0099792_106672333	3300009143	Vadose Zone Soil	MFVAEFREDVRTIIPAIAECLKDFDSGVRKAAIKLLSRLATQG
Ga0099792_108392711	3300009143	Vadose Zone Soil	MRSSLFVAEFREDVRITIPAIAECLKEFDSDVCKGAIELLS
Ga0099792_110076732	3300009143	Vadose Zone Soil	AEFQEYVRIAIPTIAECLKDSESDVLKAAIEGLSMLAAQGLC*
Ga0099796_100209542	3300010159	Vadose Zone Soil	VCSSIFVAEFKEEVRTTIPATVECLRDSDSDVREAAIELLSRL
Ga0099796_100517275	3300010159	Vadose Zone Soil	MFVAEFREDVWITIPTIAEHLKDSDSGVRKAASEG
Ga0099796_100999372	3300010159	Vadose Zone Soil	VCSSVFVAHFRENVSIIIPAIEEGLKNTDSGIRKTAIEGVSRLAMQGIH*
Ga0099796_102020394	3300010159	Vadose Zone Soil	MMVAEFRGDIRITIPAIVDRLKDSDSAVRKAAIKGVLRLAAHGVC*
Ga0099796_102020395	3300010159	Vadose Zone Soil	REDIRITIPAIAEGLNRSHFDARKAAIKLLSVLATQGMC*
Ga0099796_103105301	3300010159	Vadose Zone Soil	AEFQEDIRISIPAVVEQLKNSDWYVRNAAIEFLSRLAAQGTC*
Ga0099796_104478961	3300010159	Vadose Zone Soil	MFVAEFREDIRIVIPTIAEGLKNSGQYVRSAAIGLLSSLAAQGMC*
Ga0099796_104626251	3300010159	Vadose Zone Soil	MFVAEFLEDVRIMIPAIAEHLKNSDFYVHKAAIRLLSKLAVQGMF*
Ga0099796_105780161	3300010159	Vadose Zone Soil	MTVAEFREDVRITIPVIAEGLKHVDSDVRKTAIVGVSRLAVQGMC*
Ga0099796_105908482	3300010159	Vadose Zone Soil	VCSSMFAAEFREDVRITIPAIVECLKDSDSHVCLAAIEVLSRLAAQGMC*
Ga0137398_106703843	3300012683	Vadose Zone Soil	MLVAEFREDVRIIVLGIAEHLNDSDWYVRNVAIELLSRLAAQGMY*
Ga0137413_115520442	3300012924	Vadose Zone Soil	MFVAEFQEDVRIAIPAIVKRLKDSHSDVRKAAIRLLSML
Ga0137410_111458591	3300012944	Vadose Zone Soil	CSSTFVAEFRDDIRIAIPAIAEHLKDSDWHVRKEVIELLSTLEAQGIC*
Ga0137411_12454031	3300015052	Vadose Zone Soil	MFEAEFREDVRITIPAIVGRLKDFDSDVRKAAIEGLSTLAALGMC*
Ga0137412_105737441	3300015242	Vadose Zone Soil	MCVAEFLEDVRTTIPAIAECLKDFDSDVRKAAIELLSEPAAQGMC*
Ga0137409_106411871	3300015245	Vadose Zone Soil	RDDIRIAIPVIAEHLKDSDWHVRKEVIELLSTLEAQGIC*
Ga0137409_108063762	3300015245	Vadose Zone Soil	MFVVEFLEDIQITIPAVAEHLKNSDPDVRLVAIQILSRLADQGVF*
Ga0137409_113193091	3300015245	Vadose Zone Soil	SSIFVAEFREDVRITIPAIAEHLKDSHSYVRLAAIELLSRLAAEGMC*
Ga0179590_10004573	3300020140	Vadose Zone Soil	MFVAEFREDVRITIPAIVECLKDSDSHVCLAAIEVLSRLAAQGMC
Ga0179590_10004574	3300020140	Vadose Zone Soil	MFVAKFREDVRITIPAIAERLKASDRYVRSAAIEILSGLAVQGMC
Ga0179590_100061911	3300020140	Vadose Zone Soil	MFVAEFQEDVPISTIAEHLKDSDMYVRKTVIEGVSMLAAQGMC
Ga0179590_10006195	3300020140	Vadose Zone Soil	MFVAEFREDVWITIPTIAEHLKDSDSGVRKAASEGVSRLAAQGMG
Ga0179590_10006196	3300020140	Vadose Zone Soil	MFVAEFQEEVRIAIPAIAEHLKDSDYDVRKAAIKLVSILAVQSMC
Ga0179590_10006198	3300020140	Vadose Zone Soil	VLTSLSGGCTQSMLVAEFREEVRIAIPAIAEHLKDSDSDVRKAAIKLVSGLAAQGMC
Ga0179590_10100855	3300020140	Vadose Zone Soil	MFIAEFREDVRITIPAIVEYLKDSDWYVCKAAVELLSRVAVQGM
Ga0179590_10114781	3300020140	Vadose Zone Soil	FRWACSSMFVAEFREDVRITIPAIVEYLKDSDWYVCKAAVELLSRVAVQGMC
Ga0179590_10114782	3300020140	Vadose Zone Soil	MLVAEFREDIRIAIPAIAECLKDFDSDVCKAAIELLSRLAMQGMC
Ga0179590_10141482	3300020140	Vadose Zone Soil	MFEAEFREDVRITIPAIVGRLKDFDSDVRKAAIEGLSTLAALGMC
Ga0179590_10146772	3300020140	Vadose Zone Soil	MFVAEFREDVQITIRAIVEGVKNSHRYLRQAAIEVLSRLAAQGGC
Ga0179590_10146774	3300020140	Vadose Zone Soil	MFIAEFREDVRTILPAVAECLKDSDSDFREAAIGLISSLAARGMC
Ga0179590_10146776	3300020140	Vadose Zone Soil	MCVAEFLKDVRTTIPAIAECLKDFDSDVRKAAIELLSELAAQGMC
Ga0179590_10217311	3300020140	Vadose Zone Soil	VFVAEFREDVRITIPAIADRLKHSDSDVRSAAIKLLSMLAAQ
Ga0179590_10595545	3300020140	Vadose Zone Soil	VLKESVAEFREEIRMTIPAIAEHLTDSKWDVRPAAIELLSRLVAQGLC
Ga0179590_10595546	3300020140	Vadose Zone Soil	VCSSTFVAEFRDDIRIAIPAIAEHLKDSDWHVRKEVIELLSTLEAQGIC
Ga0179590_10933432	3300020140	Vadose Zone Soil	VRTMIPAIAEHLKNSDFYVHKAAIRLLSKLAVQGMF
Ga0179590_11394041	3300020140	Vadose Zone Soil	MFVAEFREDVRIIIPAIAEGLKDSDRYVRSAAIEGVSRLVAQGMC
Ga0179590_11394042	3300020140	Vadose Zone Soil	MFVAEFREDIRIVIPTIAEGLKNSGQYVRSAAIGLLSSLAAQGMC
Ga0179590_11394043	3300020140	Vadose Zone Soil	MFVAEFREDIRIIITAIAEGLKDSDSQVSAAIELLSRLAARGMC
Ga0179590_11702161	3300020140	Vadose Zone Soil	VCVRITFWWVCSGMFVAEFREDILITIPAIVGLLKDFDSDVRKAAIEGLSTLAALGMC
Ga0179590_11702162	3300020140	Vadose Zone Soil	MFIAEFQEDVRIAIPAIGECLKDSESDVLKAAIEGLSMLAAQGLC
Ga0179590_11790761	3300020140	Vadose Zone Soil	MTVAEFRGDIRITIPAIVDRLKDSDSAVRKAAIKGVLRLAAHGVC
Ga0179590_11948831	3300020140	Vadose Zone Soil	MFVAEFLEDVRTMIPAIAEHLKNSDFYVHKAAIRLLSKLAVQGMF
Ga0179590_11954921	3300020140	Vadose Zone Soil	VYSSVFVAEFQEDIRISIPAVVEQLKNSDWYVRNAAIEFLSRLAAQGTC
Ga0179589_100010594	3300024288	Vadose Zone Soil	VCSNTFVADFREDIPITIPAMAEHLKDSDLYVREAAIEGVLRMAAQGMC
Ga0179589_100013975	3300024288	Vadose Zone Soil	MFVAEFREDVRITVLGIAEHLNDSDWYDRNVAIELLSRLAAQGMY
Ga0179589_100153033	3300024288	Vadose Zone Soil	MFAVEFRVDVRITIPTIVECLKDSGSHVRSAAIEHLSRLAAQVCVRSAPTCL
Ga0179589_100283514	3300024288	Vadose Zone Soil	MILAEFREDIRITIPAIAEGLNRSHFDARKAAIKLLSVLATQGMC
Ga0179589_100557092	3300024288	Vadose Zone Soil	MLFLAEFRDDIRITIPAIVEGMKDSNQYLRNAAIELLSRLAALGMY
Ga0179589_100662543	3300024288	Vadose Zone Soil	MFVAEFWEDIRIIFPAIVEHLHDSDHDIHSAAIELLSELAAQGVC
Ga0179589_101728141	3300024288	Vadose Zone Soil	VFVAHLQKDVSIVIPAIEEGLKNSDSGICKTAIEGVSRLAMQGIY
Ga0179589_102153193	3300024288	Vadose Zone Soil	MFVAEFREDILITIPAIVGLLKDFDSDVRKAAIEGLSTLAALGMC
Ga0179589_102243563	3300024288	Vadose Zone Soil	VLVSLRWVCSSIFVAEFQEDVRITIPAITEGLNVSDWYVRQAAIEGVSRLAAQGMC
Ga0179589_104213133	3300024288	Vadose Zone Soil	SMFVVAGLREDVRITIPAIAERLKDPDSHVRSEAIGVLSRLAAQSMC
Ga0179589_104521982	3300024288	Vadose Zone Soil	VFVAEFREDVRITIPAIADHLKDSHFYVRKAAIELLSMLAAQGMC
Ga0179589_106182161	3300024288	Vadose Zone Soil	VFEAEFREDIRIIIPVILEGLKAPRQYVCKASIELLSRLAA
Ga0209179_10079304	3300027512	Vadose Zone Soil	TFVAEFREDVRITIPAIMQCLEHFDPHVQEAVIEGVVRLAAQGMC
Ga0209179_10505382	3300027512	Vadose Zone Soil	MTVAEFREGVRITIPVIAEGLKHFDSDVRKTAIVGVSRLAVQGMC
Ga0209179_10623483	3300027512	Vadose Zone Soil	CVSITLRWVCSSVFVAEFREDVRITIPAIAERLKDSESGVRSAAIGLLSRLTAQGMC
Ga0209179_10786391	3300027512	Vadose Zone Soil	SITLWWECSSMFVAEFLEDVRIMIPAIAEHLKNSDFYVHKAAIRLLSKLAVQGMF
Ga0209179_10883572	3300027512	Vadose Zone Soil	EFREDVRITIPAIVECLKDSDSHVCLAAIEVLSRLAAQGMC
Ga0209179_11414933	3300027512	Vadose Zone Soil	IFVAEFREDVQITIPAIAEHLKDSHSYVRLAAIELLSRLAAEGMC
Ga0209179_11504262	3300027512	Vadose Zone Soil	NLRWVFSSMFVAEFREDIRITISAIVDGLKDSYSNVRSTAIEVLSRLAAQGMC
Ga0209488_1000023210	3300027903	Vadose Zone Soil	MFVAEFRKDVRITIPSIAERLKDSHSDVRSTAIEVLSRLAAQGMC
Ga0209488_1000023218	3300027903	Vadose Zone Soil	MCSSMFVAEFREDLRITIPAIAERLKASNRYVRSAAIEILSKLAAQGMC
Ga0209488_100002328	3300027903	Vadose Zone Soil	MFVAEFREDIRITISAIVDGLKDSYSNVRSTAIEVLSRLAAQGMC
Ga0209488_1000081322	3300027903	Vadose Zone Soil	MFVAEFWEDIRIIFPAIVEHLHDSDHDIHSAAIELLSGLAAQGVC
Ga0209488_100020624	3300027903	Vadose Zone Soil	MMVAEFRGDIRITIPAIVDRLKDSDSAVRKAAIKGVLRLAAHGVC
Ga0209488_1000456511	3300027903	Vadose Zone Soil	MFVAEFREDVWITIPTIAEHLKDSDSGVRKAASEGVSRLAAQGMC
Ga0209488_100045658	3300027903	Vadose Zone Soil	VLTSLSGGCTQSMLVAEFREEVRIAIPSIAEHLKDSDSDVRKAAIKLVSGLAAQGMC
Ga0209488_100140871	3300027903	Vadose Zone Soil	MLVGEFKEDVRITIPTIVARLKDSDPDVCKAAIELLSRL
Ga0209488_100142222	3300027903	Vadose Zone Soil	MLVAEFWEDIRTVIPAIAECLKGFDSDVCKAAIELLSRLAMQGMC
Ga0209488_100142223	3300027903	Vadose Zone Soil	MFVAEFREDVRITIPAIVEYLKDSDWYVCKAAVELLSRVAVQGMC
Ga0209488_100142229	3300027903	Vadose Zone Soil	MRSSLFVAEFREDVRITIPAIAECLKEFDSDVCKGAIELLSRLAAQGMC
Ga0209488_100262572	3300027903	Vadose Zone Soil	MFVAEFLEDVRIMIPAIAEHLKNSDFYVHKAAIRLLSKLAVQGMF
Ga0209488_100262574	3300027903	Vadose Zone Soil	MLVAEFREDVRITIPAIVGRLKDFDSDVRKAAIEGLSTLAALGMC
Ga0209488_100262579	3300027903	Vadose Zone Soil	MFEAEFREDVRITIPAIVGRLKDFDSDVRKAAIEGLSTLAGLGMC
Ga0209488_100315301	3300027903	Vadose Zone Soil	MFVAEFREDVRIIVLGIAEHLKNSDWYVRNAAIEFLSRLAAQGMC
Ga0209488_100315302	3300027903	Vadose Zone Soil	MFIAEFREDVRITIPATVEHLKDSDWHVRNAAITLFSRMTAHGMC
Ga0209488_100414395	3300027903	Vadose Zone Soil	VCSSIFVAEFREDVRVTISAIAEHLKGSDSHVRSAAVEVLSRLAAQGMC
Ga0209488_100469471	3300027903	Vadose Zone Soil	VCSSVFVAEFREDVRTIIPAIAERLKHFDSDVRSAAIKLLSGLAAQGMCQHHF
Ga0209488_100734394	3300027903	Vadose Zone Soil	VFVAHLREDVSIVIPAIEEGLKNSDSGIRKTAIEGVSRLAMQGIH
Ga0209488_101211203	3300027903	Vadose Zone Soil	MFAAKFLEDVWITIPAIAKCLKDSDSHVRLVVIEHHPRLGV
Ga0209488_101767811	3300027903	Vadose Zone Soil	TLRWVCSSMFVAEFREDVRIVIPAIAEGLKDSDPYVREEAVKGVSRLVVQGMY
Ga0209488_103168322	3300027903	Vadose Zone Soil	MSITLRWVCSMFVAEFREDVRITIPAIAEGLKNSGQYPLSAAIELLSGLAAQGMC
Ga0209488_103701111	3300027903	Vadose Zone Soil	LLVAEFREDVRTIIPAITEARKDSDSDVRKAVIELLSRLA
Ga0209488_103701113	3300027903	Vadose Zone Soil	MFVAEFRGNVQITIPVIAERLKDSDSEIRTAAIVGLSRMAAQGLC
Ga0209488_103701114	3300027903	Vadose Zone Soil	MFVAEFREDVQITIPAVAERLKNSDSYVRKAAIELLSRLAAQGMC
Ga0209488_106440983	3300027903	Vadose Zone Soil	MFVAEFREDVRITIPAIAERLKDSDRYVRSAAIELLSRLAAQGMC
Ga0209488_109123722	3300027903	Vadose Zone Soil	MFVAEFWEDVRVIIPAIAERLEHSDSYIRSAAIEHLSRLAAQGMC
Ga0209488_109387833	3300027903	Vadose Zone Soil	MFVAEFLEDVRIAIPAIAECLKRSDFDVRKAAVELFSRLAAQGIC

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.58
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.58
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F063360

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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