Metagenome / Metatranscriptome Family F063023

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F063023
Family Type	Metagenome / Metatranscriptome
Number of Sequences	130
Average Sequence Length	78 residues
Representative Sequence	MQFRIGKISAKCSSCDSTQFKADPEDYSGPLARFYCAVCGTAMQYADLIAQIGKQAAPPSKEGRAARRKRAHSKGGTVRR
Number of Associated Samples	95
Number of Associated Scaffolds	130

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	70.77 %
% of genes near scaffold ends (potentially truncated)	39.23 %
% of genes from short scaffolds (< 2000 bps)	80.77 %
Associated GOLD sequencing projects	76
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (83.846 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (38.462 % of family members)
Environment Ontology (ENVO)	Unclassified (53.077 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (58.462 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 40.00% β-sheet: 0.00% Coil/Unstructured: 60.00%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 130 Family Scaffolds
PF03950	tRNA-synt_1c_C	40.77
PF00034	Cytochrom_C	32.31
PF13379	NMT1_2	4.62
PF03401	TctC	1.54
PF07883	Cupin_2	1.54
PF01546	Peptidase_M20	1.54
PF12697	Abhydrolase_6	0.77
PF00749	tRNA-synt_1c	0.77
PF07687	M20_dimer	0.77
PF13924	Lipocalin_5	0.77
PF00005	ABC_tran	0.77
PF00528	BPD_transp_1	0.77
PF00069	Pkinase	0.77

COG ID	Name	Functional Category	% Frequency in 130 Family Scaffolds
COG0008	Glutamyl- or glutaminyl-tRNA synthetase	Translation, ribosomal structure and biogenesis [J]	41.54
COG0515	Serine/threonine protein kinase	Signal transduction mechanisms [T]	3.08
COG3181	Tripartite-type tricarboxylate transporter, extracytoplasmic receptor component TctC	Energy production and conversion [C]	1.54

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	84.62 %
Unclassified	root	N/A	15.38 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	84.62 %
Unclassified	root	N/A	15.38 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	83.85 %
Unclassified	root	N/A	15.38 %
Eukaryota	superkingdom	All Organisms → cellular organisms → Eukaryota	0.77 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	66.92 %
Unclassified	root	N/A	15.38 %
Viridiplantae	kingdom	All Organisms → cellular organisms → Eukaryota → Viridiplantae	0.77 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	17.69 %
Unclassified	root	N/A	15.38 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	13.08 %
Streptophyta	phylum	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta	0.77 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	15.38 %
unclassified Betaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria	10.00 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	10.00 %
Streptophytina	subphylum	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina	0.77 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	15.38 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	10.00 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	6.15 %
Embryophyta	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta	0.77 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	15.38 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	10.00 %
Afipia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Afipia	3.08 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2.31 %
Tracheophyta	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta	0.77 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	15.38 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	10.00 %
Afipia birgiae	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Afipia → Afipia birgiae	3.08 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2.31 %
Euphyllophyta	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta	0.77 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	15.38 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	10.00 %
Afipia birgiae	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Afipia → Afipia birgiae	3.08 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2.31 %
Spermatophyta	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta	0.77 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	15.38 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	10.00 %
Afipia birgiae	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Afipia → Afipia birgiae	3.08 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2.31 %
Magnoliopsida	class	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida	0.77 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	15.38 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	10.00 %
Afipia birgiae	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Afipia → Afipia birgiae	3.08 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2.31 %
Mesangiospermae	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae	0.77 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	15.38 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	10.00 %
Afipia birgiae	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Afipia → Afipia birgiae	3.08 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2.31 %
eudicotyledons	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons	0.77 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	15.38 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	10.00 %
Afipia birgiae	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Afipia → Afipia birgiae	3.08 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2.31 %
Gunneridae	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae	0.77 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	15.38 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	10.00 %
Afipia birgiae	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Afipia → Afipia birgiae	3.08 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2.31 %
Pentapetalae	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae	0.77 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	15.38 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	10.00 %
Afipia birgiae	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Afipia → Afipia birgiae	3.08 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2.31 %
asterids	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → asterids	0.77 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	15.38 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	10.00 %
Afipia birgiae	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Afipia → Afipia birgiae	3.08 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2.31 %
campanulids	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → asterids → campanulids	0.77 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	15.38 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	10.00 %
Afipia birgiae	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Afipia → Afipia birgiae	3.08 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2.31 %
Asterales	order	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → asterids → campanulids → Asterales	0.77 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	15.38 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	10.00 %
Afipia birgiae	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Afipia → Afipia birgiae	3.08 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2.31 %
Asteraceae	family	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → asterids → campanulids → Asterales → Asteraceae	0.77 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	15.38 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	10.00 %
Afipia birgiae	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Afipia → Afipia birgiae	3.08 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2.31 %
Asteroideae	subfamily	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → asterids → campanulids → Asterales → Asteraceae → Asteroideae	0.77 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	15.38 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	10.00 %
Afipia birgiae	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Afipia → Afipia birgiae	3.08 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2.31 %
Anthemideae	tribe	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → asterids → campanulids → Asterales → Asteraceae → Asteroideae → Anthemideae	0.77 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	15.38 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	10.00 %
Afipia birgiae	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Afipia → Afipia birgiae	3.08 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2.31 %
Anthemidinae	subtribe	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → asterids → campanulids → Asterales → Asteraceae → Asteroideae → Anthemideae → Anthemidinae	0.77 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	15.38 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	10.00 %
Afipia birgiae	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Afipia → Afipia birgiae	3.08 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2.31 %
Tanacetum	genus	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → asterids → campanulids → Asterales → Asteraceae → Asteroideae → Anthemideae → Anthemidinae → Tanacetum	0.77 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	15.38 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	10.00 %
Afipia birgiae	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Afipia → Afipia birgiae	3.08 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2.31 %
Tanacetum cinerariifolium	species	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → asterids → campanulids → Asterales → Asteraceae → Asteroideae → Anthemideae → Anthemidinae → Tanacetum → Tanacetum cinerariifolium	0.77 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001661\|JGI12053J15887_10092908	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → asterids → campanulids → Asterales → Asteraceae → Asteroideae → Anthemideae → Anthemidinae → Tanacetum → Tanacetum cinerariifolium	1643	Open in IMG/M
3300001661\|JGI12053J15887_10336353	Not Available	732	Open in IMG/M
3300002557\|JGI25381J37097_1065485	Not Available	584	Open in IMG/M
3300002560\|JGI25383J37093_10111011	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Afipia → Afipia birgiae	785	Open in IMG/M
3300002561\|JGI25384J37096_10009241	All Organisms → cellular organisms → Bacteria → Proteobacteria	3718	Open in IMG/M
3300002561\|JGI25384J37096_10237330	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Afipia → Afipia birgiae	532	Open in IMG/M
3300002908\|JGI25382J43887_10087828	All Organisms → cellular organisms → Bacteria → Proteobacteria	1660	Open in IMG/M
3300002908\|JGI25382J43887_10200801	All Organisms → cellular organisms → Bacteria	959	Open in IMG/M
3300002911\|JGI25390J43892_10047257	Not Available	1022	Open in IMG/M
3300005167\|Ga0066672_10058481	All Organisms → cellular organisms → Bacteria → Proteobacteria	2239	Open in IMG/M
3300005171\|Ga0066677_10684072	Not Available	575	Open in IMG/M
3300005172\|Ga0066683_10539875	All Organisms → cellular organisms → Bacteria	711	Open in IMG/M
3300005174\|Ga0066680_10339954	Not Available	957	Open in IMG/M
3300005174\|Ga0066680_10842297	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	548	Open in IMG/M
3300005176\|Ga0066679_10088729	All Organisms → cellular organisms → Bacteria → Proteobacteria	1860	Open in IMG/M
3300005176\|Ga0066679_10162305	All Organisms → cellular organisms → Bacteria → Proteobacteria	1406	Open in IMG/M
3300005176\|Ga0066679_10478622	Not Available	813	Open in IMG/M
3300005176\|Ga0066679_10887903	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	562	Open in IMG/M
3300005177\|Ga0066690_10200547	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1328	Open in IMG/M
3300005177\|Ga0066690_10229197	All Organisms → cellular organisms → Bacteria → Proteobacteria	1242	Open in IMG/M
3300005177\|Ga0066690_10289737	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1104	Open in IMG/M
3300005177\|Ga0066690_10835853	All Organisms → cellular organisms → Bacteria → Proteobacteria	594	Open in IMG/M
3300005180\|Ga0066685_10265912	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1184	Open in IMG/M
3300005186\|Ga0066676_10016126	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	3806	Open in IMG/M
3300005187\|Ga0066675_10943505	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	650	Open in IMG/M
3300005445\|Ga0070708_101595260	Not Available	607	Open in IMG/M
3300005467\|Ga0070706_101285793	All Organisms → cellular organisms → Bacteria	671	Open in IMG/M
3300005540\|Ga0066697_10167557	All Organisms → cellular organisms → Bacteria	1301	Open in IMG/M
3300005560\|Ga0066670_10485739	Not Available	760	Open in IMG/M
3300005561\|Ga0066699_10136206	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1662	Open in IMG/M
3300005569\|Ga0066705_10012370	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	4123	Open in IMG/M
3300005586\|Ga0066691_10125186	All Organisms → cellular organisms → Bacteria	1462	Open in IMG/M
3300006046\|Ga0066652_101752723	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	563	Open in IMG/M
3300006173\|Ga0070716_100363090	All Organisms → cellular organisms → Bacteria → Proteobacteria	1029	Open in IMG/M
3300006791\|Ga0066653_10308260	All Organisms → cellular organisms → Bacteria	798	Open in IMG/M
3300006794\|Ga0066658_10370480	All Organisms → cellular organisms → Bacteria	770	Open in IMG/M
3300006796\|Ga0066665_10849764	All Organisms → cellular organisms → Bacteria → Proteobacteria	713	Open in IMG/M
3300006797\|Ga0066659_10705401	Not Available	825	Open in IMG/M
3300006797\|Ga0066659_10741798	All Organisms → cellular organisms → Bacteria	806	Open in IMG/M
3300006797\|Ga0066659_10803829	All Organisms → cellular organisms → Bacteria	778	Open in IMG/M
3300006800\|Ga0066660_10736333	All Organisms → cellular organisms → Bacteria → Proteobacteria	806	Open in IMG/M
3300007255\|Ga0099791_10131874	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1161	Open in IMG/M
3300007258\|Ga0099793_10392835	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Afipia → Afipia birgiae	681	Open in IMG/M
3300007258\|Ga0099793_10397086	All Organisms → cellular organisms → Bacteria → Proteobacteria	678	Open in IMG/M
3300007258\|Ga0099793_10481325	All Organisms → cellular organisms → Bacteria → Proteobacteria	616	Open in IMG/M
3300007265\|Ga0099794_10172093	All Organisms → cellular organisms → Bacteria → Proteobacteria	1104	Open in IMG/M
3300009012\|Ga0066710_102066984	All Organisms → cellular organisms → Bacteria → Proteobacteria	840	Open in IMG/M
3300009012\|Ga0066710_102751047	All Organisms → cellular organisms → Bacteria	699	Open in IMG/M
3300009038\|Ga0099829_10746534	Not Available	813	Open in IMG/M
3300009088\|Ga0099830_10343768	Not Available	1198	Open in IMG/M
3300009088\|Ga0099830_10864090	All Organisms → cellular organisms → Bacteria	747	Open in IMG/M
3300009089\|Ga0099828_11442759	All Organisms → cellular organisms → Bacteria → Proteobacteria	607	Open in IMG/M
3300009090\|Ga0099827_10112656	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2179	Open in IMG/M
3300009090\|Ga0099827_11611345	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	565	Open in IMG/M
3300009137\|Ga0066709_101711980	All Organisms → cellular organisms → Bacteria	891	Open in IMG/M
3300009137\|Ga0066709_103355004	All Organisms → cellular organisms → Bacteria → Proteobacteria	582	Open in IMG/M
3300010322\|Ga0134084_10003515	All Organisms → cellular organisms → Bacteria → Proteobacteria	3554	Open in IMG/M
3300010329\|Ga0134111_10551905	All Organisms → cellular organisms → Bacteria	511	Open in IMG/M
3300010336\|Ga0134071_10793406	Not Available	506	Open in IMG/M
3300010337\|Ga0134062_10009920	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3486	Open in IMG/M
3300010364\|Ga0134066_10123577	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	781	Open in IMG/M
3300011269\|Ga0137392_11178429	Not Available	624	Open in IMG/M
3300011270\|Ga0137391_10050182	All Organisms → cellular organisms → Bacteria → Proteobacteria	3557	Open in IMG/M
3300011271\|Ga0137393_10981089	All Organisms → cellular organisms → Bacteria	720	Open in IMG/M
3300011271\|Ga0137393_11139710	All Organisms → cellular organisms → Bacteria → Proteobacteria	662	Open in IMG/M
3300012096\|Ga0137389_10197542	All Organisms → cellular organisms → Bacteria → Proteobacteria	1673	Open in IMG/M
3300012189\|Ga0137388_10311116	Not Available	1446	Open in IMG/M
3300012189\|Ga0137388_11678805	All Organisms → cellular organisms → Bacteria → Proteobacteria	569	Open in IMG/M
3300012198\|Ga0137364_10289462	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1215	Open in IMG/M
3300012198\|Ga0137364_11016451	All Organisms → cellular organisms → Bacteria	626	Open in IMG/M
3300012199\|Ga0137383_10108041	All Organisms → cellular organisms → Bacteria → Proteobacteria	2024	Open in IMG/M
3300012200\|Ga0137382_10563254	All Organisms → cellular organisms → Bacteria → Proteobacteria	812	Open in IMG/M
3300012203\|Ga0137399_11235264	All Organisms → cellular organisms → Bacteria	629	Open in IMG/M
3300012203\|Ga0137399_11245281	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	626	Open in IMG/M
3300012203\|Ga0137399_11796822	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	501	Open in IMG/M
3300012206\|Ga0137380_11427361	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Afipia → Afipia birgiae	577	Open in IMG/M
3300012224\|Ga0134028_1097921	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	599	Open in IMG/M
3300012361\|Ga0137360_10374772	All Organisms → cellular organisms → Bacteria → Proteobacteria	1196	Open in IMG/M
3300012362\|Ga0137361_10328228	Not Available	1402	Open in IMG/M
3300012362\|Ga0137361_11552593	All Organisms → cellular organisms → Bacteria	583	Open in IMG/M
3300012685\|Ga0137397_10120623	All Organisms → cellular organisms → Bacteria → Proteobacteria	1931	Open in IMG/M
3300012685\|Ga0137397_10123280	All Organisms → cellular organisms → Bacteria → Proteobacteria	1910	Open in IMG/M
3300012918\|Ga0137396_11181694	All Organisms → cellular organisms → Bacteria → Proteobacteria	541	Open in IMG/M
3300012922\|Ga0137394_10374576	All Organisms → cellular organisms → Bacteria → Proteobacteria	1214	Open in IMG/M
3300012925\|Ga0137419_10274449	All Organisms → cellular organisms → Bacteria → Proteobacteria	1279	Open in IMG/M
3300012925\|Ga0137419_11214696	Not Available	631	Open in IMG/M
3300012925\|Ga0137419_11714950	Not Available	536	Open in IMG/M
3300012929\|Ga0137404_10111963	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2218	Open in IMG/M
3300012930\|Ga0137407_10422638	All Organisms → cellular organisms → Bacteria	1236	Open in IMG/M
3300012944\|Ga0137410_11177664	All Organisms → cellular organisms → Bacteria	659	Open in IMG/M
3300015054\|Ga0137420_1198085	Not Available	574	Open in IMG/M
3300015241\|Ga0137418_10133019	All Organisms → cellular organisms → Bacteria → Proteobacteria	2207	Open in IMG/M
3300018061\|Ga0184619_10189521	All Organisms → cellular organisms → Bacteria → Proteobacteria	944	Open in IMG/M
3300018431\|Ga0066655_10029968	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2640	Open in IMG/M
3300018431\|Ga0066655_10459072	All Organisms → cellular organisms → Bacteria → Proteobacteria	841	Open in IMG/M
3300018468\|Ga0066662_11483785	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	705	Open in IMG/M
3300018482\|Ga0066669_10053674	Not Available	2564	Open in IMG/M
3300024330\|Ga0137417_1326938	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	2425	Open in IMG/M
3300024330\|Ga0137417_1422083	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1238	Open in IMG/M
3300024330\|Ga0137417_1436594	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	4497	Open in IMG/M
3300026296\|Ga0209235_1016346	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	4034	Open in IMG/M
3300026296\|Ga0209235_1045466	All Organisms → cellular organisms → Bacteria → Proteobacteria	2149	Open in IMG/M
3300026297\|Ga0209237_1109118	Not Available	1194	Open in IMG/M
3300026306\|Ga0209468_1139989	All Organisms → cellular organisms → Bacteria	661	Open in IMG/M
3300026310\|Ga0209239_1030197	All Organisms → cellular organisms → Bacteria	2585	Open in IMG/M
3300026313\|Ga0209761_1028013	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3420	Open in IMG/M
3300026313\|Ga0209761_1318846	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	532	Open in IMG/M
3300026316\|Ga0209155_1000043	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	51867	Open in IMG/M
3300026318\|Ga0209471_1123802	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1097	Open in IMG/M
3300026318\|Ga0209471_1135069	All Organisms → cellular organisms → Bacteria → Proteobacteria	1036	Open in IMG/M
3300026318\|Ga0209471_1146761	All Organisms → cellular organisms → Bacteria → Proteobacteria	979	Open in IMG/M
3300026318\|Ga0209471_1324395	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	510	Open in IMG/M
3300026324\|Ga0209470_1262948	All Organisms → cellular organisms → Bacteria → Proteobacteria	682	Open in IMG/M
3300026325\|Ga0209152_10237370	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	679	Open in IMG/M
3300026328\|Ga0209802_1138954	All Organisms → cellular organisms → Bacteria → Proteobacteria	1043	Open in IMG/M
3300026329\|Ga0209375_1002301	All Organisms → cellular organisms → Bacteria → Proteobacteria	13897	Open in IMG/M
3300026333\|Ga0209158_1138629	All Organisms → cellular organisms → Bacteria	898	Open in IMG/M
3300026532\|Ga0209160_1169182	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	950	Open in IMG/M
3300026538\|Ga0209056_10082048	All Organisms → cellular organisms → Bacteria → Proteobacteria	2715	Open in IMG/M
3300026542\|Ga0209805_1024813	All Organisms → cellular organisms → Bacteria → Proteobacteria	3104	Open in IMG/M
3300026548\|Ga0209161_10202235	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1096	Open in IMG/M
3300026555\|Ga0179593_1028526	All Organisms → cellular organisms → Bacteria → Proteobacteria	3347	Open in IMG/M
3300027181\|Ga0208997_1046299	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	644	Open in IMG/M
3300027383\|Ga0209213_1088388	All Organisms → cellular organisms → Bacteria → Proteobacteria	576	Open in IMG/M
3300027643\|Ga0209076_1035619	All Organisms → cellular organisms → Bacteria → Proteobacteria	1394	Open in IMG/M
3300027738\|Ga0208989_10078542	All Organisms → cellular organisms → Bacteria → Proteobacteria	1129	Open in IMG/M
3300027862\|Ga0209701_10094131	All Organisms → cellular organisms → Bacteria → Proteobacteria	1878	Open in IMG/M
3300027875\|Ga0209283_10163367	All Organisms → cellular organisms → Bacteria → Proteobacteria	1478	Open in IMG/M
3300027882\|Ga0209590_10302465	All Organisms → cellular organisms → Bacteria → Proteobacteria	1027	Open in IMG/M
3300028536\|Ga0137415_10031520	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	5215	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	99.23%
Aquatic	Environmental → Aquatic	0.77%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	99.23%
Sediment	Environmental → Aquatic → Sediment	0.77%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	91.54%
Loam	Environmental → Terrestrial → Soil → Loam	7.69%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.77%

Habitat	Taxonomy	Distribution
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	48.46%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	43.08%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	3.85%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	2.31%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	1.54%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.77%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	38.46%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	32.31%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	16.15%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	4.62%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	3.85%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.31%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	1.54%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.77%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001661	Mediterranean Blodgett CA OM1_O3 (Mediterranean Blodgett coassembly)	Environmental	Open in IMG/M
3300002557	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_20cm	Environmental	Open in IMG/M
3300002560	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_20cm	Environmental	Open in IMG/M
3300002561	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_40cm	Environmental	Open in IMG/M
3300002908	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_40cm	Environmental	Open in IMG/M
3300002911	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_2_20cm	Environmental	Open in IMG/M
3300005167	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121	Environmental	Open in IMG/M
3300005171	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126	Environmental	Open in IMG/M
3300005172	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132	Environmental	Open in IMG/M
3300005174	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129	Environmental	Open in IMG/M
3300005176	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128	Environmental	Open in IMG/M
3300005177	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139	Environmental	Open in IMG/M
3300005180	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134	Environmental	Open in IMG/M
3300005186	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125	Environmental	Open in IMG/M
3300005187	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005540	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_146	Environmental	Open in IMG/M
3300005560	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_119	Environmental	Open in IMG/M
3300005561	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148	Environmental	Open in IMG/M
3300005569	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154	Environmental	Open in IMG/M
3300005586	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140	Environmental	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006791	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_102	Environmental	Open in IMG/M
3300006794	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107	Environmental	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300006800	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109	Environmental	Open in IMG/M
3300007255	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1	Environmental	Open in IMG/M
3300007258	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3	Environmental	Open in IMG/M
3300007265	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300010322	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010329	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_11112015	Environmental	Open in IMG/M
3300010336	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09082015	Environmental	Open in IMG/M
3300010337	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09082015	Environmental	Open in IMG/M
3300010364	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09212015	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012224	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_20cm_2_4_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental	Open in IMG/M
3300012918	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300015054	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300015241	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300018061	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_b1	Environmental	Open in IMG/M
3300018431	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300024330	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300026296	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_20cm (SPAdes)	Environmental	Open in IMG/M
3300026297	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_40cm (SPAdes)	Environmental	Open in IMG/M
3300026306	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_102 (SPAdes)	Environmental	Open in IMG/M
3300026310	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_2_20cm (SPAdes)	Environmental	Open in IMG/M
3300026313	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_40cm (SPAdes)	Environmental	Open in IMG/M
3300026316	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122 (SPAdes)	Environmental	Open in IMG/M
3300026318	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128 (SPAdes)	Environmental	Open in IMG/M
3300026324	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125 (SPAdes)	Environmental	Open in IMG/M
3300026325	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107 (SPAdes)	Environmental	Open in IMG/M
3300026328	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129 (SPAdes)	Environmental	Open in IMG/M
3300026329	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131 (SPAdes)	Environmental	Open in IMG/M
3300026333	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140 (SPAdes)	Environmental	Open in IMG/M
3300026532	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153 (SPAdes)	Environmental	Open in IMG/M
3300026538	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114 (SPAdes)	Environmental	Open in IMG/M
3300026542	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148 (SPAdes)	Environmental	Open in IMG/M
3300026548	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155 (SPAdes)	Environmental	Open in IMG/M
3300026555	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300027181	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM2_M1 (SPAdes)	Environmental	Open in IMG/M
3300027383	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM1_M2 (SPAdes)	Environmental	Open in IMG/M
3300027643	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3 (SPAdes)	Environmental	Open in IMG/M
3300027738	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM3_M1 (SPAdes)	Environmental	Open in IMG/M
3300027862	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027875	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027882	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300028536	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12053J15887_100929082	3300001661	Forest Soil	MQFRIGKISAKCSSCDSTQFKADPEDHSGPLARFYCAVCGTTMQYAELIAQIGKQAAPHPKEARPARPKQRAK*
JGI12053J15887_103363532	3300001661	Forest Soil	MQFRIGKISAKCSSCGSTQFKADPEDHSGPLARFYCALCGTAMQYSNLIAQIGKQAAPGSKEGRAARRKRSHSKGGTV
JGI25381J37097_10654852	3300002557	Grasslands Soil	MQFRIGKISAKCSSCDSTQFKADPEDYSGPLARFYCAVCGTAMQYADLIAQIGQQAAPRPKEARAPQRKRAHSKGGTVRR
JGI25383J37093_101110112	3300002560	Grasslands Soil	MQFRIGKISAKCSSCDSTQFKADPEDYSGPLARFYCAVCGTAMQYADLISQIGKQAAPLSKESRAARPKRRRAR*
JGI25384J37096_100092414	3300002561	Grasslands Soil	MQFRIGKISAKCSSCDSTQFKADPEDYSGPLARFYCAVCGTAMQYADLIAQIGKQAAPPSKEARVPRRKRAHSKGGTVRR*
JGI25384J37096_102373301	3300002561	Grasslands Soil	LISRKARMQFRIGKISAKCSSCDSTQFKADPEDYSGPLARFYCAVCGTAMQYADLISQIGKQAAPLSKESRAARPKRRRAR*
JGI25382J43887_100878282	3300002908	Grasslands Soil	MQFRIGKISANCSSCDSTQFKADPEDYSGPLARFYCAVCGTAMQYADLIAQIGQQAAPPSKEARVPRRKRAHSKGGTVRR*
JGI25382J43887_102008011	3300002908	Grasslands Soil	MQFRIGKISAKCSSCDSTQFKADPEDYSGPLARFYCAVCGTAMQYADLISQIGKQAAPPSKESRAARPKRRRAR*
JGI25390J43892_100472572	3300002911	Grasslands Soil	MQFRIGKISAKCSSCDSTQFKADPEDYSGPLARFYCAVCGTAMQYADLIAQIGQQAAPPSKE
Ga0066672_100584812	3300005167	Soil	MQFRIGKISAKCSCGSTQFKADPEDHSGPLARFYCAVCATATQYSELIAQIGQQAAPRSKEGRGPQRKRVHSKGGTVRR*
Ga0066677_106840722	3300005171	Soil	MQFRIGKISAKCSSCDSTQFKPDPEDYSGPLARYYCAVCGTAMQYADLIAQIGQQAAPPSKEAR
Ga0066683_105398752	3300005172	Soil	AKCSSCDSTQFKADPEDYSGPLARFYCAVCGTAMQYADLISQIGKQAAPLSKESRAARPKRRRAR*
Ga0066680_103399542	3300005174	Soil	MQFRIGKISAKCSSCDSTQFKADPEDYSGPLARFYCAVCGTAIQYADLIAQIGKQAAPPSKEGRAARRKRAHSKGGTIRR*
Ga0066680_108422972	3300005174	Soil	MQFRIGKISAKCSSCDSTQFKADPEDYSGPLARFYCAVCGTAMQYADLIAQIGQQAAPPSKEARVPRRKRAHSKGGTVRR*
Ga0066679_100887292	3300005176	Soil	MQFRIGKISAKCSSCGSTQFKADPEDHSGPLARFYCAICDTATQYSELIAQIGQQAAPRSKEGRAPQRKRVQSKGGTVRR*
Ga0066679_101623052	3300005176	Soil	MQFRIGKISAKCSCGSTQFKADPEDHSGPLARFYCAVCATATQYSELIAQIGQQAAPRSKEGRASQRKRVQSKGGTVRR*
Ga0066679_104786222	3300005176	Soil	MQFRIGKISAKCSSCGSTQFKADPADHSGPLARFYCAVCDTATQYAELIAQIGQQAAPRSKEGRGPQR
Ga0066679_108879032	3300005176	Soil	MQFRIGKISAKCSSCGSTQFKADPEDHSGPLARFYCAVCGSAMQYSELIAQIGQQAAPRSKEGRGPQRRRAYSKGGTVRR*
Ga0066690_102005473	3300005177	Soil	KARMQFRIGKISAKCSSCDSTQFKADPEDYSGPLARFYCAVCGTAMQYADLIAQIGQQAAPPSKEARVPRRKRAHSKGGTVRR*
Ga0066690_102291972	3300005177	Soil	MQFRIGKISAKCSSCGSTQFKADPEDHSGPLARFYCAVCGSAMQYSELIAQIGQQAAPRSKEGRGPQRKRVHSKGGTVRR*
Ga0066690_102897371	3300005177	Soil	VLLPSLLISRKASMQFRIGKISAKCSSCGSTQFKADPEDHSGPLARFYCAICDTATQYSELIAQIGQQAAPRSKEGRAPQRKRVQSKGGTVRR*
Ga0066690_108358532	3300005177	Soil	MQFRIGKISAKCSSCGSTQFKPDPEDHSGPLARFYCAVCGTATQYSELIAQIGQQAAPRSKEGRASQRKRAYSKGGSVRR*
Ga0066685_102659122	3300005180	Soil	AKCSSCDSTQFKADPEDYSGPLARFYCAVCGTAMQYADLIAQIGQQAAPPSKEARVPRRKRAHSKGGTVRR*
Ga0066676_100161266	3300005186	Soil	MQFRIGKISAKCSSCDSTQFKADPEDYSGPLARFYCAVCGTAMQYADLIAQIGQQAAPPSKESRAARPKRRRAR*
Ga0066675_109435051	3300005187	Soil	MQFRIGKISAKCSSCDSTQFKPDPEDYSGPLARFYCAVCGTAMQYADLIAQIGQAAPPSKEARIPRRKRAHSKGGTVRR*
Ga0070708_1015952602	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MQFRIGKISAKCSACDSTQFKADPEDYSGPLARFYCAVCNTAMQYADLIAQIGKQAAPPSKEGRAARRKRAHSKGGTVRR*
Ga0070706_1012857931	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	SAKCSACDSTQFKADPEDYSGPLARFYCAVCNTAMQYADLIAQIGKQAAPPSKEGRAARRKRAHSKGGTVRR*
Ga0066697_101675571	3300005540	Soil	RIGKISAKCSSCDSTQFKADPEDYSGPLARFYCAVCGTAMQYADLIAQIGKQAAPPSKEGRAARRKRAHSKGGTVRR*
Ga0066670_104857392	3300005560	Soil	MQFRIGKISAKCSSCDSTQFKPDPEDYSGPLARFYCAVCGTAMQYADLIAQIGQQAAPPSKEAR
Ga0066699_101362063	3300005561	Soil	MQFRIGKISAKCSSCGSTQFKPDPEDHSGPLARFYCAVCDTATQYSELIAQIGQQAAPRSKEGRGPQRKRAYSKGGTVRR*
Ga0066705_100123705	3300005569	Soil	MQFRIGKISAKCSSCDSTQFKPDPEDYSGPLARFYCAVCGTAMQYADLIAQIGQAAPPSKEARVPRRKRAHSKGGTVRR*
Ga0066691_101251862	3300005586	Soil	MQFRIGKISAKCSSCGSTQFKADPEDHSGPLARFYCALCDTTMQYSQLIAQIGKQAAPRSKEGRAAR
Ga0066652_1017527232	3300006046	Soil	RIGKISAKCSSCDSTQFKADPEDYSGPLARFYCAVCGTAMQYADLIAQIGKQAAPPSKEARVPRRKRAHSKGGTVRR*
Ga0070716_1003630902	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	MQFRIGKISAKCSDCDSTQFKADPEDYSGPLARFYCAVCNTAMQYADLIAQIGKQAAPPSKEGRAARRKRAHSKGGTVRR*
Ga0066653_103082601	3300006791	Soil	RIGKISAKCSSCDSTQFKADPEDYSGPLARFYCAVCGTAMQYADLIAQIGQQAAPRPKEARVPQRKRAHSKGGTVRR*
Ga0066658_103704801	3300006794	Soil	RMQFRIGKISAKCSSCDSTQFKADPEDYSGPLARFYCAVCGTAMQYADLIAQIGQQAAPPSKEARVPRRKRAHSKGGTVRR*
Ga0066665_108497642	3300006796	Soil	MQFRIGKISAKCSSCDSTQFKADPEDYSGPLARFYCAVCGTAMQYSDLIAQIGQQAAPTSKEDRAARRKRAHSKGGTVRR*
Ga0066659_107054012	3300006797	Soil	MQFRIGKISAKCSSCGSTQFKADPEDHSGPLARFYCAICDTATQYSELIAQIGQQAAPRSKE
Ga0066659_107417982	3300006797	Soil	SSCDSTQFKADPEDYSGPLARFYCAVCGTAMQYADLIAQIGQQAAPPSKEARVPRRKRAHSKGGTVRR*
Ga0066659_108038292	3300006797	Soil	SSCDSTQFKADPEDYSGPLARFYCAVCGTAMQYADLIAQIGKQAAPPSKEARVPRRKRAHSKGGTVRR*
Ga0066660_107363332	3300006800	Soil	MQFRIGKISAKCSSCGSTQFKADPADHSGPLARFYCAVCDTATQYSELIAQIGQQAAPRSKEGRGPQRKRVHSKGGTVRR*
Ga0099791_101318742	3300007255	Vadose Zone Soil	RKAGMQFRIGKISAKCSSCDSTQFKADPEDYSGPLARFYCAVCGTAMQYADLIAQIGKQAAPRPKEGRAAQRKRAHSKGGTVRR*
Ga0099793_103928352	3300007258	Vadose Zone Soil	GYRFTTLADHFRKAPMQFRIGKINAKCSSCGSTQFKADPEDHSGPLARFYCALCDTTMQYSQLIAQIGKQAAPRSKEGRAARRKRRPAD*
Ga0099793_103970862	3300007258	Vadose Zone Soil	MQFRIGKISAKCSSCDSTQFKADPEDYSGPLARFYCAVCGTAMQYADLIAQIGKQAAPHPKEARPARPKQRAK*
Ga0099793_104813252	3300007258	Vadose Zone Soil	MQFRIGKISAKCSSCDSTQFKADPEDYSGPLARFYCAVCGTAMQYADLIAQIGKQAAPTSKEGRAARRKRAHSKGGTVRR*
Ga0099794_101720932	3300007265	Vadose Zone Soil	MQFRIGRISAKWSSCGSTQFKADPEDHSGPLARFYCALCGTTMQYSQLIAQIGKQAAPRSKEGRAARRKRRPAD*
Ga0066710_1020669842	3300009012	Grasslands Soil	MQFRIGKISAKCSSCDSTQFKPDPEDYSGPLARFHCAVCGTAMQYADLISQIGKQAAPPSKEARIPRRKRAHSKGGTVRR
Ga0066710_1027510471	3300009012	Grasslands Soil	SAKCSSCDSTQFKADPEDYSGPLARFYCAVCGTAMQYADLIAQIGQQAAPPSKESRAARPKRRRAR
Ga0099829_107465342	3300009038	Vadose Zone Soil	MQFRIGRISAKCSSCGSTQFKADPEDHSGPLARFYCALCGTTMQYSELIAQIGKQAAPRSKEDRPARRKRSHSRGGTVRR*
Ga0099830_103437681	3300009088	Vadose Zone Soil	MQFRIGRISAKCSSCSSTQFKADPEDHSGPLARFYCALCGTTMQYSQLIAQIGKQAAPGSKEGRAARRKRSHSKGGTVRR*
Ga0099830_108640902	3300009088	Vadose Zone Soil	IGRISAKCSSCSSTQFKADPEDHSGPLARFYCALCGTTMQYSQLIAQIGKQAAPGSKEARAARRKRSHSKGGTVRR*
Ga0099828_114427592	3300009089	Vadose Zone Soil	MQFCIGRISAKCSSCASTQFKADPEDHSGPLARFYCALCGTTMQYSELIAQIGKQAAPGSKEGRAARRKRSHSKGGTVRR*
Ga0099827_101126562	3300009090	Vadose Zone Soil	MQFRIGRISAKCSSCGSTQFKADPEDHSGPLARFYCALCGTTMQYSQLIAQIGKQAAPRSKEGRAARRKRRPAD*
Ga0099827_116113452	3300009090	Vadose Zone Soil	MQFRIGKISAKCSACDSTQFKADPEDYSGPLARFYCAVCNTAMQYADLIAQIGKQAAPGSKEGRAARRKRSHSKGGTVRR*
Ga0066709_1017119802	3300009137	Grasslands Soil	SCDSTQFKADPEDYSGPLARFYCAVCGTAMQYADLISQIGKQAAPLSKESRAARPKRRRAR*
Ga0066709_1033550042	3300009137	Grasslands Soil	MQFRIGKISAKCSSCDSTQFKPDPEDYSGPLARFHCAVCGTAMQYADLISQIGKQAAPPSKEARIPRRKRAHSKGGTVRR*
Ga0134084_100035153	3300010322	Grasslands Soil	MQFRIGKISAKCSSCDSTQFKPDPEDYSGPLARFYCAVCGTAMQYADLIAQIGQQAAPPSKEARVPRRKRAHSKGGTVRR*
Ga0134111_105519052	3300010329	Grasslands Soil	MQFRIGKISAKCSSCDSTQFKADPEDYSGPLARFYCAVCGTAMQYADLIAQIGQQAAPPSKESRAARPKRSRAR*
Ga0134071_107934061	3300010336	Grasslands Soil	MQFRIGKISAKCSSCDSTQFKADPEDYSGPLARFYCAVCGTAMQYADLIAQIGQQAAPRPKEARAPQRKR
Ga0134062_100099205	3300010337	Grasslands Soil	MQFRIGKISAKCSSCDSTQFKADPEDYSGPLARFYCAVCGTAMQYADLIAQIGQQAAPPSKEARIPRRKRAHSKGGTVRR*
Ga0134066_101235771	3300010364	Grasslands Soil	MQFRIGKISAKCSSCDSTQFKPDPEDYSGPLARFYCAVCGTAMQYADLIAQIGQQAAPRPKEARVPQRKRAHSKGGTVRR*
Ga0137392_111784291	3300011269	Vadose Zone Soil	MQFRIGRISAKCSSCASTQFKADPEDHSGPLARFYCALCGTTMQYSELIAQIGKQAAPGSKEGRAARRKRSHSKGGTVRR*
Ga0137391_100501826	3300011270	Vadose Zone Soil	YRFTTLADHFRKARMQFRIGRISAKCSSCGSTQFKADPEDHSGPLARFYCALCGTTMQYSQLIAQIGKQAAPGSKEGRAARRKRSHSKGGTVRR*
Ga0137393_109810891	3300011271	Vadose Zone Soil	GHNSSRRGYRFTTLADHFRKARMQFRIGRISAKCSSCGSTQFKADPEDHSGPLARFYCALCGTTMQYSELIAQIGKQAAPGSKEGRAARRKRSHSKGGTVRR*
Ga0137393_111397102	3300011271	Vadose Zone Soil	MQFRIGRISAKCSSCSSTQFKADPEDHSGPLARFYCALCGTTMQYSQLIAQIGKQAAPRSKEGRAARRKRSHSKGGTVRR*
Ga0137389_101975423	3300012096	Vadose Zone Soil	MQFRIGRISAKCSSCGSTQFKADPEDHSGPLARFYCALCGTTMQYSQLIAQIGKQAAPRSKEGRAARRKRSHSKGGTVRR*
Ga0137388_103111162	3300012189	Vadose Zone Soil	MQFRIGRISAKCSSCSSTQFKADPEDHSGPLARFYCALCGTTMQYSQLIAQIGKQAAPGSKEGRAARRKRSHS
Ga0137388_116788052	3300012189	Vadose Zone Soil	MQFRIGKISAKCSSCGSTQFKADPEDHSGPLARFYCALCGTTMQYSQLIAQIGKQAAPRSKEGRAARRKRSHSKGGTVRR*
Ga0137364_102894622	3300012198	Vadose Zone Soil	MQFRIGRISAKCSSCDSTQFKADPEDHSGPLARFYCAVCGGAMQYSDLIAQIGKQAAPHPKQGRAPRPKQRAK*
Ga0137364_110164512	3300012198	Vadose Zone Soil	FLEQVKANENAVIIPRGAVAVLLPSLLISRKARMQFRIGKISAKCSSCGSTQFKADPEDHSGPLARFYCAVCGTATQYSELIAQIGQQAAPRSKEGRASQRKRAYSKGGTVRR*
Ga0137383_101080412	3300012199	Vadose Zone Soil	MQFRIGKISAKCSSCDSTQFKADPEDYSGPLARFYCAVCGTAMQYADLIAQIGQQAAPRPKEARVPQRKRAHSKGGTVRR*
Ga0137382_105632542	3300012200	Vadose Zone Soil	MQFRIGKISAKCSSCGSTQFKADPEDHSGPLARFYCALCGTATQYSELIAQIGQQAAPRPKEARVPQRKRAHSKGGTVRR*
Ga0137399_112352641	3300012203	Vadose Zone Soil	MQFRIGKISAKCSSCSSMQFKADPDDHSGPLARFYCALCGTTMQYAQLIAQIGKQAAPRSKEDRSARRKRSHSKGGTVRR*
Ga0137399_112452812	3300012203	Vadose Zone Soil	SSCDSTQFKADPEDYSGPLARFYCAVCGTAMQYADLIAQIGKQAAPTSKEGRAARRKRAHSKGGTVRR*
Ga0137399_117968221	3300012203	Vadose Zone Soil	SRRGYRFTTLADHFRKAPMQFRIGKISAKCSSCGSTQFKADPEDHSGPLARFYCALCGTTMQYSQLIAQIGKQAAPRSKEGRAARRKRRPAD*
Ga0137380_114273611	3300012206	Vadose Zone Soil	LPSLLISRKARMQFRIGKISAKCSSCDSTQFKADPEDYSGPLARFYCAVCGTAMQYADLISQIGKQAAPPSTESRAARPKRRRAR*
Ga0134028_10979211	3300012224	Grasslands Soil	RKARMQFRIGKISAKCSSCDSTQFKPDPEDYSGPLARFYCAVCGTAMQYADLIAQIGQQAAPPSKEARVPRRKRAHSKGGTVRR*
Ga0137360_103747722	3300012361	Vadose Zone Soil	MQFRIGKISAKCSSCDSTQFKADPEDYSGPLARFYCAVCDTAMQYADLIAQIGKQAAPTSKEGRAARRKRAHSKGGTVRR*
Ga0137361_103282282	3300012362	Vadose Zone Soil	MQFRIGKISAKCSSCGSTQFKADPEDHSGPLARFYCALCDTTMQYSQLIAQIGKQAAPRSKEGRAARRKRRPAD*
Ga0137361_115525932	3300012362	Vadose Zone Soil	ARMQFRIGKISAKCSSCDSTQFKADPEDYSGPLARFYCAVCGTAMQYADLIAQIGKQAAPTSKEGRAARRKRAHSKGGTVRR*
Ga0137397_101206232	3300012685	Vadose Zone Soil	MQFRIGKISAKCSSCDSTQFKADPEDYSGPLARFYCAVCGTAMQYADLIAQIGKQAAPRPKEARPARPKQRAK*
Ga0137397_101232803	3300012685	Vadose Zone Soil	MQFRIGKISAKCSSCSSTQFKADPEDHSGPLARFYCALCGTTMQYSQLIAQIGKQAAPGSKEGRGARRKRSHSKGGTVRR*
Ga0137396_111816942	3300012918	Vadose Zone Soil	MQFRIGRISAKCSSCSSTQFKADPEDHSVPLARFYCALCGTAMQYSDLIAQIGKQAAPRSKEDRSARR
Ga0137394_103745762	3300012922	Vadose Zone Soil	MQFRIGRISAKCSSCGSTQFKADPEDHSGSLARFYCALCGTTMQYSQLIAQIGKQAAPRSKEGRAARRKRSHSKGGTVRR*
Ga0137419_102744492	3300012925	Vadose Zone Soil	MQFRIGKISAKCSSCDSTQFKADPEDYSGPLARFYCAVCGTAMQYADLIAQIGKQAAPRPKEGRAAQRKRAHSKGGTVRR*
Ga0137419_112146962	3300012925	Vadose Zone Soil	MQFRIGKISAKCSSCDSTQFKADPEDYSGPLARFYCAVCGTAMQYADLIAQIGKQAAPHPKEARPAR
Ga0137419_117149501	3300012925	Vadose Zone Soil	MQFRIGKISAKCSSCGSTQFKADPEDHSGPLARFYCALCDTTMQYSQLIAQIGKQAAPHPKEARPARPKQRAK*
Ga0137404_101119633	3300012929	Vadose Zone Soil	SCDSTQFKADPEDYSGPLARFYCAVCGTAMQYADLIAQIGKQAAPTSKEGRAARRKRAHSKGGTVRR*
Ga0137407_104226382	3300012930	Vadose Zone Soil	MQFRIGKISAKCSSCDSTQFKADPEDYSGPLARFYCAVCGTAMQYADLIAQIGKQAAPLSKENRAARPKRRRAR*
Ga0137410_111776642	3300012944	Vadose Zone Soil	SCGSTQFKADPEDLSGPLARFYCARCGTGMLYSALIAQIGKQAAPRSKEDRAARPKRGYSKGGTVRR*
Ga0137420_11980851	3300015054	Vadose Zone Soil	MQFRIGKISAKCSSCDSTQFKADPEDYSGPLARFYCAVCGTAMQYADLIAQIGKQAAPHPKEARLARPKQRAK*
Ga0137418_101330192	3300015241	Vadose Zone Soil	MQFRIGRISAKCSSCSSTQFKADPEDHSGPLARFYCALCGTTMQYSQLIAQIGKQAAPGSKEGRAARRKRRPAD*
Ga0184619_101895212	3300018061	Groundwater Sediment	MQFRIGKISAKCSSCDSTQFKADPEDYSGPLARFYCAVCGTAMQYADLIAQIGKQAAPHPKEARPARPKQRAK
Ga0066655_100299681	3300018431	Grasslands Soil	MQFRIGKISAKCSSCDSTQFKADPEDYSGPLARFYCAVCGTAMQYADLIAQIGKQAAPPSKESRAARPKRRRAR
Ga0066655_104590722	3300018431	Grasslands Soil	MQFRIGKISAKCSSCDSTQFKADPEDYSGPLARFYCAVCGTAMQYADLIAQIGQQAAPPSKESRAARPKRRRAR
Ga0066662_114837852	3300018468	Grasslands Soil	MQFRIGKISAKCSSCDSTQFKADPEDYSGPLARFYCAVCGTAMQYADLIAQIGQQAAPRPKEARAPQRKRGHSKGGTVRR
Ga0066669_100536742	3300018482	Grasslands Soil	MQFRIGKISAKCSSCDSTQFKPDPEDYSGPLARFYCAVCGTAMQYADLIAQIGQAAPPSKEARIPRRKRAHSKGGTVRR
Ga0137417_13269383	3300024330	Vadose Zone Soil	MQFRIGKISAKCSSCDSTQFKADPEDYSGPLARFYCAVCGTAMQYADLIAQIGKQAAPTSKEGRAARRKRAHSKGGTVRR
Ga0137417_14220833	3300024330	Vadose Zone Soil	MQFRIGKISAKCSSCDSTQFKADPEDYSGPLARFYCAVCGTAMQYADLIAQIGKQAAPHPKE
Ga0137417_14365943	3300024330	Vadose Zone Soil	MQFRIGKISAKCSSCDSTQFKADPEDYSGPLARFYCAVCGTAMQYADLIAQIGKQAAPHRRKLAPPVRSNAPNNYSSGGTVRR
Ga0209235_10163462	3300026296	Grasslands Soil	MQFRIGKISAKCSSCDSTQFKADPEDYSGPLARFYCAVCGTAMQYADLISQIGKQAAPLSKESRAARPKRRRAR
Ga0209235_10454662	3300026296	Grasslands Soil	MQFRIGKISAKCSSCDSTQFKADPEDYSGPLARFYCAVCGTAMQYADLIAQIGKQAAPPSKEARVPRRKRAHSKGGTVRR
Ga0209237_11091181	3300026297	Grasslands Soil	MQFRIGKISAKCSSCDSTQFKADPEDYSGPLARFYCAVCGTAMQYADLIAQIGQQAAPPSKEARVPRRKRAHSKGGTVRR
Ga0209468_11399891	3300026306	Soil	AALQPRSHAKGFLQQIKNAVIVPRAAVAVLLPSLLISRKARMQFRIGKISAKCSSCDSTQFKADPEDYSGPLARFYCAVCGTAMQYADLIAQIGQQAAPRPKEARVPQRKRAHSKGGTVR
Ga0209239_10301972	3300026310	Grasslands Soil	MQFRIGKISAKCSSCDSTQFKADPEDYSGPLARFYCAVCGTAMQYADLIAQIGKQAAPPSKEGRAARRKRAHSKGGTVRR
Ga0209761_10280131	3300026313	Grasslands Soil	RMQFRIGKISAKCSSCDSTQFKADPEDYSGPLARFYCAVCGTAMQYADLISQIGKQAAPLSKESRAARPKRRRAR
Ga0209761_13188461	3300026313	Grasslands Soil	MQFRIGKISAKCSSCDSTQFKADPEDYSGPLARFYCAVCGTAMQYADLIAQIGKQAAPRPKQDRAPRPKQRAK
Ga0209155_100004318	3300026316	Soil	MQFRIGKISAKCSSCDSTQFKPDPEDYSGPLARFYCAVCGTAMQYADLIAQIGQQAAPPSKEARVPRRKRAHSKGGTVRR
Ga0209471_11238022	3300026318	Soil	MQFRIGKISAKCSSCGSTQFKADPEDHSGPLARFYCAICDTAMQYSELIAQIGQQAAPRSKEGRAPQRKRVQSKGGTVRR
Ga0209471_11350691	3300026318	Soil	MQFRIGKISAKCSSCGSTQFKADPEDHSGPLARFYCAVCGSAMQYSELIAQIGQQAAPRSKEGRGPQRRRAYSKGGTVRR
Ga0209471_11467612	3300026318	Soil	MQFRIGKISAKCSSCGSTQFKADPADHSGPLARFYCAVCDTATQYAELIAQIGQQAAPRSKEGRGPQRKRVHSKGGTVRR
Ga0209471_13243952	3300026318	Soil	SCGSTQFKADPEDHSGPLARFYCAVCATATQYSELIAQIGQQAAPRSKEGRASQRKRVQSKGGTVRR
Ga0209470_12629482	3300026324	Soil	MQFRIGKISAKCSSCDSTQFKADPEDYSGPLARFYCAVCGTAMQYADLIAQIGQQAAPRPKEARVPQRKRAHSKGGTVRR
Ga0209152_102373702	3300026325	Soil	AAVAVLLPSLLISRKARMQFRIGKISAKCSSCDSTQFKADPEDYSGPLARFYCAVCGTAMQYADLIAQIGQQAAPPSKEARVPRRKRAHSKGGTVRR
Ga0209802_11389541	3300026328	Soil	MQFRIGKISAKCSSCDSTQFKADPEDYSGPLARFYCAVCGTAIQYADLIAQIGKQAAPPSKEGRAARRKRAHSKGGTIRR
Ga0209375_10023019	3300026329	Soil	MQFRIGKISAKCSSCDSTQFKADPEDYSGPLARFYCAVCGTAMQYADLIAQIGKQAAPPSKEAGVPRRKRAHSKGGTVRR
Ga0209158_11386291	3300026333	Soil	ISAKCSSCDSTQFKADPEDYSGPLARFYCAVCGTAMQYADLISQIGKQAAPLSKESRAARPKRRRAR
Ga0209160_11691821	3300026532	Soil	RIGKISAKCSSCDSTQFKADPEDYSGPLARFYCAVCGTAMQYADLIAQIGQQAAPPSKEARVPRRKRAHSKGGTVRR
Ga0209056_100820483	3300026538	Soil	MQFRIGKISAKCSSCDSTQFKADPEDYSGPLARFYCAVCGTAMQYSDLIAQIGQQAAPTSKEDRAARRKRAHSKGGTVRR
Ga0209805_10248134	3300026542	Soil	MQFRIGKISAKCSSCGSTQFKPDPEDHSGPLARFYCAVCDTATQYSELDGATFGISAPRSKEGRGPQRKRAYSKGGTVRR
Ga0209161_102022352	3300026548	Soil	QFRIGKISAKCSSCDSTQFKADPEDYSGPLARFYCAVCGTAMQYSDLIAQIGQQAAPTSKEDRAARRKRAHSKGGTVRR
Ga0179593_10285262	3300026555	Vadose Zone Soil	MQFRIGKISAKCSSCDSTQFKADPEDYSGPLARFYCAVCGTAMQYADLIAQIGKQAAPHPKEARLARPKQRAK
Ga0208997_10462992	3300027181	Forest Soil	MQFRIGKISAKCSSCDSTQFKADPEDHSGPLARFYCAVCGTTMQYAELIAQIGKQAAPHPKEARPARPKQRAK
Ga0209213_10883882	3300027383	Forest Soil	MQFRIGKISAKCSSCGSTQFKADPEDHSGPLARFYCALCGTAMQYSNLIAQIGKQAAPGSKEGRAARRKRSHSKGGTVRR
Ga0209076_10356191	3300027643	Vadose Zone Soil	GMQFRIGKISAKCSSCDSTQFKADPEDYSGPLARFYCAVCGTAMQYADLIAQIGKQAAPHPKEARPARPKQRAK
Ga0208989_100785422	3300027738	Forest Soil	MQFRIGKISAKCSSCDSTQFKADPEDHSGPLARFYCALCGTAMQYSNLIAQIGKQAAPGSKEGRAARRKRSHSRGGTVRR
Ga0209701_100941312	3300027862	Vadose Zone Soil	MQFRIGRISAKCSSCSSTQFKADPEDHSGPLARFYCALCGTTMQYSQLIAQIGKQAAPGSKEARAARRKRSHSKGGTVRR
Ga0209283_101633672	3300027875	Vadose Zone Soil	MQFRIGRISAKCSSCSSTQFKADPEDHSGPLARFYCALCGTTMQYSQLIAQIGKQAAPGSKEGRAARRKRSHSKGGTVRR
Ga0209590_103024652	3300027882	Vadose Zone Soil	MQFRIGRISAKCSSCGSTQFKADPEDHSGPLARFYCALCGTTMQYSQLIAQIGKQAAPRSKEGRAARRKRRPAD
Ga0137415_100315207	3300028536	Vadose Zone Soil	MQFRIGKISAKCSSCGSTQFKADPEDHSGPLARFYCALCDTTMQYSQLIAQIGKQAAPRSKEGRAARRKRRPAD

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F063023

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences