Metagenome / Metatranscriptome Family F062998

Basic Information
Family ID	F062998
Family Type	Metagenome / Metatranscriptome
Number of Sequences	130
Average Sequence Length	76 residues
Representative Sequence	FGRMIREARIHFAAVIEEARIAGLDTGAIAVMLGKLNIELADSIRPELWVRVEQLLAERAARKPAERRGLR
Number of Associated Samples	120
Number of Associated Scaffolds	130

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	0.00 %
% of genes near scaffold ends (potentially truncated)	0.00 %
% of genes from short scaffolds (< 2000 bps)	0.00 %
Associated GOLD sequencing projects	119
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.35

Most Common Taxonomy
Group	Unclassified (100.000 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (19.231 % of family members)
Environment Ontology (ENVO)	Unclassified (26.923 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (30.000 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 51.52% β-sheet: 0.00% Coil/Unstructured: 48.48%
Feature Viewer

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Pfam ID	Name	% Frequency in 130 Family Scaffolds
PF00037	Fer4	46.92
PF12838	Fer4_7	7.69
PF13577	SnoaL_4	4.62
PF00291	PALP	3.08
PF00072	Response_reg	2.31
PF02397	Bac_transf	1.54
PF00118	Cpn60_TCP1	1.54
PF03460	NIR_SIR_ferr	1.54
PF13450	NAD_binding_8	1.54
PF06210	DUF1003	0.77
PF13472	Lipase_GDSL_2	0.77
PF00578	AhpC-TSA	0.77
PF12800	Fer4_4	0.77
PF00389	2-Hacid_dh	0.77
PF07313	DUF1460	0.77
PF01161	PBP	0.77
PF06762	LMF1	0.77
PF00082	Peptidase_S8	0.77
PF03704	BTAD	0.77
PF00484	Pro_CA	0.77
PF00171	Aldedh	0.77
PF13490	zf-HC2	0.77
PF00561	Abhydrolase_1	0.77
PF16925	TetR_C_13	0.77

COG ID	Name	Functional Category	% Frequency in 130 Family Scaffolds
COG0459	Chaperonin GroEL (HSP60 family)	Posttranslational modification, protein turnover, chaperones [O]	1.54
COG2148	Sugar transferase involved in LPS biosynthesis (colanic, teichoic acid)	Cell wall/membrane/envelope biogenesis [M]	1.54
COG0014	Gamma-glutamyl phosphate reductase	Amino acid transport and metabolism [E]	0.77
COG0288	Carbonic anhydrase	Inorganic ion transport and metabolism [P]	0.77
COG1012	Acyl-CoA reductase or other NAD-dependent aldehyde dehydrogenase	Lipid transport and metabolism [I]	0.77
COG1881	Uncharacterized conserved protein, phosphatidylethanolamine-binding protein (PEBP) family	General function prediction only [R]	0.77
COG3629	DNA-binding transcriptional regulator DnrI/AfsR/EmbR, SARP family, contains BTAD domain	Transcription [K]	0.77
COG3947	Two-component response regulator, SAPR family, consists of REC, wHTH and BTAD domains	Transcription [K]	0.77
COG4230	Delta 1-pyrroline-5-carboxylate dehydrogenase	Amino acid transport and metabolism [E]	0.77
COG4420	Uncharacterized membrane protein	Function unknown [S]	0.77

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	100.00 %

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	84.62%
Host-Associated	Host-Associated	13.85%
Engineered	Engineered	1.54%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	67.69%
Aquatic	Environmental → Aquatic	16.92%
Plants	Host-Associated → Plants	13.85%
Bioremediation	Engineered → Bioremediation	1.54%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	65.38%
Rhizosphere	Host-Associated → Plants → Rhizosphere	10.77%
Freshwater	Environmental → Aquatic → Freshwater	9.23%
Sediment	Environmental → Aquatic → Sediment	5.38%
Rhizoplane	Host-Associated → Plants → Rhizoplane	3.08%
Marine	Environmental → Aquatic → Marine	2.31%
Agricultural Field	Environmental → Terrestrial → Agricultural Field	1.54%
Metal	Engineered → Bioremediation → Metal	1.54%
Floodplain	Environmental → Terrestrial → Floodplain	0.77%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	52.31%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	9.23%
Loam	Environmental → Terrestrial → Soil → Loam	6.15%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	5.38%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	5.38%
Sediment	Environmental → Aquatic → Freshwater → Sediment	4.62%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	3.08%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	3.08%
Wetlands	Environmental → Aquatic → Marine → Wetlands	2.31%
Ice	Environmental → Aquatic → Freshwater → Ice	1.54%
Sand	Environmental → Terrestrial → Soil → Sand	1.54%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified	1.54%
Soil	Host-Associated → Plants → Rhizosphere → Soil	1.54%
Unclassified	Engineered → Bioremediation → Metal → Unclassified	1.54%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	0.77%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	40.00%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	9.23%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	5.38%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	5.38%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	5.38%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	4.62%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	3.85%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	3.08%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	3.08%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	2.31%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	2.31%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	2.31%
Unclassified	Environmental → Aquatic → Freshwater → Ice → Unclassified	1.54%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	1.54%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified	1.54%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	1.54%
Unclassified	Engineered → Bioremediation → Metal → Unclassified → Unclassified	1.54%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	0.77%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	0.77%
Uranium Contaminated	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated	0.77%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.77%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	0.77%
Unclassified	Environmental → Terrestrial → Soil → Loam → Unclassified	0.77%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	0.77%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	19.23%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	10.00%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	7.69%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	5.38%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	3.85%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	3.85%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.85%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	3.08%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	3.08%
Natural And Restored Wetlands	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands	3.08%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	2.31%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	2.31%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	2.31%
Freshwater Wetlands	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands	1.54%
Polar Desert Sand	Environmental → Aquatic → Freshwater → Ice → Unclassified → Polar Desert Sand	1.54%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	1.54%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	1.54%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.54%
Groundwater Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand	1.54%
Soil	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified → Soil	1.54%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	1.54%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	1.54%
Sediment Slurry	Engineered → Bioremediation → Metal → Unclassified → Unclassified → Sediment Slurry	1.54%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	0.77%
Freshwater Wetlands	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands	0.77%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	0.77%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.77%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	0.77%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.77%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	0.77%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.77%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.77%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.77%
Soil	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil	0.77%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.77%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.77%
Soil	Environmental → Terrestrial → Soil → Loam → Unclassified → Soil	0.77%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	0.77%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.77%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.77%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.77%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.77%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000550	Amended soil microbial communities from Kansas Great Prairies, USA - BrdU amended with acetate total DNA F2.4 TB clc assemly	Environmental	Open in IMG/M
3300003987	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_TuleB_D2	Environmental	Open in IMG/M
3300003990	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Goodyear_PhragC_D2	Environmental	Open in IMG/M
3300004052	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushOxbow_ThreeSqC_D2	Environmental	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300004480	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4	Environmental	Open in IMG/M
3300005295	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005366	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG	Host-Associated	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005542	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1	Environmental	Open in IMG/M
3300005564	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG	Host-Associated	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006224	Freshwater wetland microbial communities from Ohio, USA, analyzing the effect of biotic and abiotic controls - Mud 3 Core 4 Depth 4 metaG	Environmental	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006880	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3	Host-Associated	Open in IMG/M
3300006903	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009168	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (6) Depth 19-21cm September2015	Environmental	Open in IMG/M
3300009789	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot28	Environmental	Open in IMG/M
3300009815	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S1_0_10	Environmental	Open in IMG/M
3300009837	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_20_30	Environmental	Open in IMG/M
3300009840	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105A	Environmental	Open in IMG/M
3300010036	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot26	Environmental	Open in IMG/M
3300010038	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot106	Environmental	Open in IMG/M
3300010323	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300011003	Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t9i015	Environmental	Open in IMG/M
3300011412	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT620_2	Environmental	Open in IMG/M
3300012187	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ448 (21.06)	Environmental	Open in IMG/M
3300012204	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaG	Environmental	Open in IMG/M
3300012225	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT860_2	Environmental	Open in IMG/M
3300012353	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_80_16 metaG	Environmental	Open in IMG/M
3300012354	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_60_16 metaG	Environmental	Open in IMG/M
3300012355	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_113_16 metaG	Environmental	Open in IMG/M
3300012358	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_100_16 metaG	Environmental	Open in IMG/M
3300012360	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_113_16 metaG	Environmental	Open in IMG/M
3300012684	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ279 (21.06)	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012931	Freshwater wetland microbial communities from Ohio, USA - Open water 3 Core 3 Depth 3 metaG	Environmental	Open in IMG/M
3300012937	Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t5i015	Environmental	Open in IMG/M
3300014259	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNE_CattailB_D1	Environmental	Open in IMG/M
3300014263	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_TuleC_D1	Environmental	Open in IMG/M
3300014267	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNE_CattailC_D1	Environmental	Open in IMG/M
3300014302	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNE_CattailA_D2	Environmental	Open in IMG/M
3300015264	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300017930	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_5	Environmental	Open in IMG/M
3300018066	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_5_b1	Environmental	Open in IMG/M
3300018077	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_170_b1	Environmental	Open in IMG/M
3300018078	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_60_coex	Environmental	Open in IMG/M
3300018079	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_127_b1	Environmental	Open in IMG/M
3300018429	Populus adjacent soil microbial communities from riparian zone of Shoshone River, Wyoming, USA - 504 T	Environmental	Open in IMG/M
3300019233	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019259	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019269	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_5 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019377	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 112 T	Environmental	Open in IMG/M
3300020018	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2s2	Environmental	Open in IMG/M
3300021073	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60_b1 redo	Environmental	Open in IMG/M
3300021078	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_5_coex redo	Environmental	Open in IMG/M
3300021344	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2a2	Environmental	Open in IMG/M
3300025289	Soil microbial communities from Rifle, Colorado, USA - sediment 16ft 2	Environmental	Open in IMG/M
3300025324	Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 10_1 (SPAdes)	Environmental	Open in IMG/M
3300025905	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025914	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026088	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026116	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026480	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NL-07-B	Environmental	Open in IMG/M
3300027364	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant Co AM (SPAdes)	Host-Associated	Open in IMG/M
3300027650	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT152D67 HiSeq	Environmental	Open in IMG/M
3300027842	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027875	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300028597	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Glucose_Day14	Environmental	Open in IMG/M
3300028608	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Xylose_Day6	Environmental	Open in IMG/M
3300028711	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_150	Environmental	Open in IMG/M
3300028718	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_194	Environmental	Open in IMG/M
3300028784	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_121	Environmental	Open in IMG/M
3300028793	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_159	Environmental	Open in IMG/M
3300028799	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_123	Environmental	Open in IMG/M
3300028809	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_PalmiticAcid_Day48	Environmental	Open in IMG/M
3300028812	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Vanillin_Day48	Environmental	Open in IMG/M
3300028828	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_202	Environmental	Open in IMG/M
3300028872	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_204	Environmental	Open in IMG/M
3300028878	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_117	Environmental	Open in IMG/M
3300028881	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_116	Environmental	Open in IMG/M
3300028884	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_195	Environmental	Open in IMG/M
3300028885	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_185	Environmental	Open in IMG/M
3300030336	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day1	Environmental	Open in IMG/M
3300030606	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT145D125	Environmental	Open in IMG/M
3300030904	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_202 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030987	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_144 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031093	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_198 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031094	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_203 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031114	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_182 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300031854	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D1	Environmental	Open in IMG/M
3300032004	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3	Host-Associated	Open in IMG/M
3300032075	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D3	Environmental	Open in IMG/M
3300032421	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NN3	Environmental	Open in IMG/M
3300033417	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT142D155	Environmental	Open in IMG/M
3300033418	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_T1_C1_D1_A	Environmental	Open in IMG/M
3300033480	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M1_C1_D5_B	Environmental	Open in IMG/M
3300033486	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_N3_C1_D5_A	Environmental	Open in IMG/M
3300034078	Uranium-contaminated sediment microbial communities from bioreactor in Oak Ridge, Tennessee, United States - B1A0.1	Engineered	Open in IMG/M
3300034164	Sediment microbial communities from East River floodplain, Colorado, United States - 14_s17	Environmental	Open in IMG/M
3300034191	Uranium-contaminated sediment microbial communities from bioreactor in Oak Ridge, Tennessee, United States - B4A4.1	Engineered	Open in IMG/M
3300034681	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_121 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
F24TB_124652441	3300000550	Soil	QRLDGARDLYLLALALGDRNDGFAPFGRMIREARIHFAAVIEEARIAGLDTSAIAVMLGKPNMVLADSIRPDLWARVEQLLAEAAGKRAKRRDTR*
Ga0055471_101963741	3300003987	Natural And Restored Wetlands	SALFGRMIREARIHFAAVIEEARIAGLDTGAIAVMLGKRNIELADSIRPELWAGVEQLLAERAARRGPARRARP*
Ga0055455_100266361	3300003990	Natural And Restored Wetlands	LGDRPDGSPLFGRMIREARIHFAAVIEEARIAGLDTGAIAVMLGKMNIELADSIRPELWAGVEQLLAERAARQRSERREPQR*
Ga0055490_100295964	3300004052	Natural And Restored Wetlands	LGERPDGSVFGRMIREARIHFAAVIEEARIAGLDTGAIAVMLGKLNIELADSIRPELWARVEQLLAEQAARKPAERRGLR*
Ga0062589_1026455711	3300004156	Soil	ARDLYLLALALGERTDGFTPFGRMILEARIHFAAVIEEARLAGLDTGAIAGMLGKPELAGSIRPELWVRLEQLLAERTARTRKDRGATGP*
Ga0063356_1033169332	3300004463	Arabidopsis Thaliana Rhizosphere	RMIREARIHFAAVIEEARIAGLDTGAIAVMLGKLNIELADSIRPELWARVEQLLAERAARKPAERPGRRSTL*
Ga0062595_1024917441	3300004479	Soil	LIREARIHFAAVIEEARIAGLDTGAIAGMLGRASRELTESIRPELWARVEELLAERATHQRAERREQR*
Ga0062592_1003169201	3300004480	Soil	FAAVIEEARIAGLDTKAIASMLGRLSSELNDSIRPELWARVEQLLAERATYPRRGAPG*
Ga0065707_109299721	3300005295	Switchgrass Rhizosphere	ARDLYLLALALGQRHDGPSLFGRMIREARIHFAAVIEEARIAGLDTSAIAVMLGKLNIELADSIRPELWTRVEQLLAERAARRSSP*
Ga0066388_1021193754	3300005332	Tropical Forest Soil	GERHEGPSPLGRMIREARIHFAAVIEEARIAGLDTSAIAVMLGKLNIELADSIRPELWTRVEQLLAERASRRSSP*
Ga0070659_1010761941	3300005366	Corn Rhizosphere	RSDGSPLFGRMIREARIHFAAVIEEARIAGLDTKAIASMLGRLSSELNDSIRPELWARVEQLLAERATYPRRGAPG*
Ga0070705_1000297093	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	MIREARIHFAAVVEEARIARLDTSAIAVMLGKLNIELADSIRPELWARVEQLLAEQAARRSSP*
Ga0070697_1019995821	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	HFAAVIEEARIAGLDTGAIAVMLGKLNIELADSIRPELWVRVEQLLAERAARKPGERRGLR*
Ga0070732_101594553	3300005542	Surface Soil	PGGSPLFGRMIQEARIHFAAVIEEARIAGLDTSSIAAMLGKMNTGVGDSIRPELWARFEQLVADRAARRGRRKSS*
Ga0070664_1012218751	3300005564	Corn Rhizosphere	FAAVIEEARIAGLDTKSIASMLGRLSSELNDSIRPELWARVEQLLAERATYPRRGAPG*
Ga0070716_1015195751	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	DGARDLYLLALALGDRPGGSALFGRMIREARIHFAAVIEEARIAGLDTGAIAAMLGKRSIELADSIRPELWAGVEKLLAERAARRGPARRGRP*
Ga0079037_1017834322	3300006224	Freshwater Wetlands	ALGDRRAGFAPFGRMIREARIHFAAVIEEARIAGLDTGAIAEVLGQSNIERSIRPDLWSRLEQLLTEAGDTPAQRQDAR*
Ga0079220_106310012	3300006806	Agricultural Soil	YLLALALGTRGDGATLFGRMIREARIHFAAVIEECRIAGLETSAIAVMLGKANRELVDSIRPEIWEHLEKLMAQRARGRAG*
Ga0075428_1013954082	3300006844	Populus Rhizosphere	PSPLGRMIREARIHFAAVIEEARIAGLDTSAIAVMLGKWNIKLVDSIRPELWARLEELLAERGARERRARRGPS*
Ga0075428_1015642351	3300006844	Populus Rhizosphere	TLRLDGARDLYLLALALGERPDGSALFGRMIREARIHFAAVIEEARIAGLDTGAIAVMLGQLNIELADSIRPELWAGVEQLLAERAARRVPARRGRP*
Ga0075425_1020650511	3300006854	Populus Rhizosphere	RDLYLLALALGQRHDGPSLFGRMIREARIHFAAVIEEARIAGLDTSAIAVMLGKLNIELADSIRPELWARVEQLLAERAARRISQ*
Ga0075434_1020774501	3300006871	Populus Rhizosphere	LDGARDLYLLALALGDRPDGPALFGRLIREARIHFVAVIEEARIAGLDTGAIAVMLGKTSIELADSIRPELWARVEQLLAERATHKRAERRDTR*
Ga0075429_1016793612	3300006880	Populus Rhizosphere	DGSPLFGRMIREARIHFAAVIEEARIAGLDTKAIASMLGRLSSELNDSIRPELWARVEQLLAERATYPRRGAPG*
Ga0075426_102549311	3300006903	Populus Rhizosphere	RDLYLLALALGDRPDGPALFGRLIREARIHFVAVIEEARIAGLDTGAIAVMLGKTSIELADSIRPELWARVEQLLAERATHKRAERRDTR*
Ga0075424_1011932012	3300006904	Populus Rhizosphere	HFAAVIEEARIAGLDTSAIAVMLGKWNIKLVDSIRPELWARLEELLAERGARERRARRGPS*
Ga0099829_100252292	3300009038	Vadose Zone Soil	MIREARIHFAAVIEEARIARLDTSAIAVMLGKLNIELADSIRPELWARVEQLLAEQAARRGSP*
Ga0066709_1036019332	3300009137	Grasslands Soil	MIRKGGIHFAAVLEEARIAGLDTSAMAEMLGTRSQKLSDSIRPELWARVEELVAQRSARGSR*
Ga0075423_101449874	3300009162	Populus Rhizosphere	LLALALGERDDGTALFGRMIREARIHFVAVIEEARIAGLDTSAIARMLGKLKIELADSIRPELWARVEQLLAERATHKRAERRGPR*
Ga0075423_101594153	3300009162	Populus Rhizosphere	MIREARIHFAAVIEEARIAGLDTGAIAVMLSKRNIELADNIRPELWAGVEKLLAERATRRGPARQARP*
Ga0075423_129271962	3300009162	Populus Rhizosphere	FGRMIREARIHFAAVIEEARIAGLDTSAIAVMLGKWNIKLVDSIRPELWARLEELLAERGARERRARRGPS*
Ga0105104_102695302	3300009168	Freshwater Sediment	MIREARIHFAAVIEEARIAGLDTKAIASMLGRLSSELDDSIRPELWARVEQLLAERVTYPRRGAPG*
Ga0126307_100671475	3300009789	Serpentine Soil	MIREARIHFTAVIEEARIAGLDTGAIAVMLAERNIELADSIRPELWAGVGKLLAERAARKRPERREAR*
Ga0105070_10960282	3300009815	Groundwater Sand	GERPDGSVFGRMIREARIHFAAVIEEARIAGLDTGAIAAMLGKLNIELGDSIRPELWARVEQLLAERATRKGANRRDAR*
Ga0105058_10503971	3300009837	Groundwater Sand	RIHFAAVIEEARIAGLDTGAIAAMLGKLNIELGDSIRPELWARVEQLLAERATGRRSSL*
Ga0126313_110036071	3300009840	Serpentine Soil	LYLLALALGDRPEGPALFGRMIREARIHFAAVIEEARIAGLDTGAIAVMLAKRNIELADSIRPELWVGVEKLLAERAARKRAERREAR*
Ga0126305_106866632	3300010036	Serpentine Soil	YLLALALGDRPEGSALFGRMIREARIHFAAVIEEARIAGLDTGAIAVMLAERNIELADSIRPELWAGVGKLLAERAARKRPERREAR*
Ga0126315_104600582	3300010038	Serpentine Soil	MIREARIHFAAVIEEARIAGLDTGAIAVMLAKRNIELADSIRPELWAGVEKLLADRVARKRAERREAR*
Ga0134086_103935732	3300010323	Grasslands Soil	EARIHFAAVIEEARIAGLDTSAIAVMLGKLNIELADSIRPELWARVEQLLAERAARERPVRRGPR*
Ga0126377_129695153	3300010362	Tropical Forest Soil	AVIEEVRIAGLVTCAIAVMLGKLNIELGDSIQPELWARVEQLLAERATRRNSP*
Ga0134128_126444661	3300010373	Terrestrial Soil	MIREARIHFAAVIEEARIAGLDTGAIAAMLGKRSIELADSIRPELWAGVEKLLAERAARRGPARRGRP*
Ga0134126_130580582	3300010396	Terrestrial Soil	DGARDLYLLALALGARPQGATPFGRLIREARIHFAAVIEEARIAGLDTGAIAGMLGKASSELTDSIRPELWARVEQLLAERASRQRAERRDAG*
Ga0134124_106273683	3300010397	Terrestrial Soil	LDGARDLYLLALALGQRHDGPSLFGRMIREARIHFAAVIEEARIAGLDTSAIAVMLGKLNIELADSIRPELWTRVEQLLAERAARRSSP*
Ga0134127_116659331	3300010399	Terrestrial Soil	LGARPQGAAPFGRLIREARIHFAAVIEEARIAGLDTGAIAGMLGKASSELTDSIRPELWARVEQLLAERASQQRAERRDAR*
Ga0138514_1001150321	3300011003	Soil	PSLFGRMIREARIHFAAVIEEARIAGLDTSAIAMMLGKLNIELADSIRPELWARVEQILAERAARERPVRRGPR*
Ga0137424_11250372	3300011412	Soil	EARIHFAAVIEEARIAGLDTGAIAVMLGKLNIELADSIRPELWARVEQLLAERAARKPAERRGRRGTL*
Ga0136622_102363771	3300012187	Polar Desert Sand	ERPDGSVFGRMIREARIHFAAVIEEARIAGLNTGGIAVMLGKLNIELADSIRPELWARVEQLLAERAARKPAERRGLR*
Ga0137374_104448173	3300012204	Vadose Zone Soil	RPDGSALFGRMIREARIHFAAVIEEGRIAGLDTGAIAVMLGKLNFELADSIRPELWARVEQLLAERAVRKRAERRDTR*
Ga0137434_10827482	3300012225	Soil	YLLALALADRPEGSPLFGRMIREARIHFAAVIEEARIAGLDTGAIAVMLGKLNIELADSIRPELWVRVEQLLAERAAPKPAERRGLR*
Ga0137367_103176771	3300012353	Vadose Zone Soil	PLFGRMIREARIHFAAVIEEARIAGLDTGAIAVMLGKLNIELADSIRPELWARVEQLLAERAARKRSEGRGRR*
Ga0137366_101876061	3300012354	Vadose Zone Soil	SLFGRMIREARIHFAAVIEEARIAGLDTSAIAMMLGKLNIELADSIRPELWARVEQLLAERAARERPVRRGPR*
Ga0137369_102217582	3300012355	Vadose Zone Soil	MIREARIHFAAVIEEARIAGLDTGAIAVMLGKLNIELADGIRPELWARVEQLLAERAARKRSEGRGRR*
Ga0137369_104730223	3300012355	Vadose Zone Soil	REARIHFAAVIEEGRIAGLDTGAIAVMLGKLNFELADSIRPELWARVEQLLAERAVRKRAERRDTR*
Ga0137368_108674502	3300012358	Vadose Zone Soil	MIREARIHFAAVIEEARIAGLDTGVIAVMLGKLNIELADSIRPELWARVEQLLAERAARRRGA*
Ga0137375_102253833	3300012360	Vadose Zone Soil	EGSSLFGRMIGEARIHFAAVIEEARIAGLDTSAIAMMLGKLNIELADSIRPELWARVEQLLAERAARERPVRRGPR*
Ga0137375_112512072	3300012360	Vadose Zone Soil	LYLLALALGERDDGTAPFGRMIREARIHFAGVIEEARIAGLDTGAIATMLGKLKIELADSIRPELWARVEQLLAERATHKRAERRGAR*
Ga0136614_105090063	3300012684	Polar Desert Sand	REARIHFAAVIEEARIAGLDTGAIAVMLGKLNIELADSIRPELWARVEQLLAERAARKPAERRGRRSTL*
Ga0137407_101964693	3300012930	Vadose Zone Soil	MIREARIHFAAVIEEARIAGLDTGAIAVMLGKLNIELADSIRPELWVRVEQLLAERAAPKPAERRGLR*
Ga0137407_121224362	3300012930	Vadose Zone Soil	EARIHFAAVIEEARIAGLDTSAIAVMLSKRTIELADNIRPELWAGVEKLLAERAARRGPARRGRP*
Ga0153915_130703191	3300012931	Freshwater Wetlands	RMIREARIHFAAVIEEARIAGLDTSAIAVMLGKLNIELADSIRPELWARVEQLLAERAAGRSSP*
Ga0153915_133506722	3300012931	Freshwater Wetlands	QEARIHFAAVIEEARIAGLDTSSIAVMLGKMNTGVGDSIRPELWARFEQLVADRAARRGRRKSS*
Ga0162653_1000096322	3300012937	Soil	MIREARIHFAAVIEEARIAGLDTGAIAVMLAKRNIELADSIRPELWVGVEKLLAERAARKRAERREAR*
Ga0075311_10059983	3300014259	Natural And Restored Wetlands	MIREARIHFAAVIEEARIAGLDTGAIAVMLGKRNIELADSIRPELWAGVEQLLAERAARRGPARRARP*
Ga0075324_10173561	3300014263	Natural And Restored Wetlands	RSDGSPLFGRMIREARIHFAAVIEEARIAGLDTKAIAAMLGRLSSELDDSIRPELWARVEQLLAERATYPRRGAPG*
Ga0075313_10011468	3300014267	Natural And Restored Wetlands	IHFAAVIEEARIAGLDTKAIAAMLGRLSSELDDSIRPELWARVEQLLAERATYPRRGAPG
Ga0075310_11406662	3300014302	Natural And Restored Wetlands	RIHFAAVIEEARIAGLDTGAIATMLSKRSIELADSIRPELWAGVEKLLAERAARRGPGRPGRP*
Ga0137403_115321682	3300015264	Vadose Zone Soil	ALFGRMIREARIHFAAVIEEARIAGLDTGAIAVMLGKSNIELADSIRPELWARVEQLLAEGAAHKRGARAGASESSG*
Ga0187825_103153462	3300017930	Freshwater Sediment	GARDLYLLALALGARPGGSPLFGRMIQEARIHFAAVIEEARIAGLDTSSIAVMLGKMNTGVGDSIRPELWARFEQLVADRAARRGRKKSS
Ga0184617_12180532	3300018066	Groundwater Sediment	GRMIREARIHFAAVIEEARIAGLDTGAIAAMLGKLNIELADSIRPELWARVEQLLAERAARERSVQRGPR
Ga0184633_100760781	3300018077	Groundwater Sediment	ALALGERLDGPALFGRMIREARIHFAAVIEEARIAGLDTGAIAMMLGKLNIELADSIRPELWARVEQLLAERATRTGAKRRDAR
Ga0184612_103431993	3300018078	Groundwater Sediment	LFGRMIREARIHFAAVIEEGRIAGLDTGAIAIMLGKLNFELADSIRPELWARVEQLLAERATRKRAERRDVR
Ga0184627_101403093	3300018079	Groundwater Sediment	DLYLLALALGERPDGSVFGRMIREARIHFAAVIEEARIAGLDTGAIAVMLGKLNIELADSIRPELWTRVEQLLAERAARKPAARRGLP
Ga0184627_102301542	3300018079	Groundwater Sediment	DLYLLALALGERDDGSALFGRMIREARIHFAAVVEEARIAGLDTGAIAMMLGKLNIELADSIRPELWARVEQLLAERATRTGAKRRDAR
Ga0190272_107067741	3300018429	Soil	QRLDGARDLYLLALALGARPDGSPLFGRMIREARIHFAAVIEEARIAGLDTGAIAVMLGKLNIELADSIRPELWTRVEQLLAERAVRKPGERRGLP
Ga0184645_11391402	3300019233	Groundwater Sediment	MIREARIHFAAVIEEARIAGLDTSAIAMMLGKLNIELADSIRPELWARVEQLLAERAARERPVRRGPR
Ga0184646_11473322	3300019259	Groundwater Sediment	LALGDRPDGSPLFGRMIREARIHFAAVIEEARIAGLDTSAIAMMLGKLNIELADSIRPELWARVEQLLAERAARERPVRRGPR
Ga0184644_15752891	3300019269	Groundwater Sediment	LALALGDRPEGSALFGRMIREARIHFAAVIEEARIAGLDTGSIAVMLAKRNIDLADSIRPELWAGVEKLLADRVARKRAERREAR
Ga0190264_120924442	3300019377	Soil	IREARIHFAAVIEEARIAGLDTGAIAVMLGKRNIELADSIRPELWAAVEQLLAERAARKGPARRGRP
Ga0193721_11574612	3300020018	Soil	IHFAAVIEEARIAGLDTGAIAVMLGKLNIELADSIRPELWARVEQLLAERAARKPAERRGRR
Ga0210378_103059501	3300021073	Groundwater Sediment	LYLLALALGDRPDGPSLFGRMIREARIHFAAVIEEARIAGLDTSAIAMMLGKLNIELADSIRPELWARVEQLLAERAARERSVQRGPR
Ga0210381_102910781	3300021078	Groundwater Sediment	DLYLLALALGDRPDGSALFGRMIREARIHFAAVIEEGRIAGLDTGAIAVMLGKLNFELADSIRPELWARVEQLLAERAVRKRAERRDTR
Ga0193719_102092202	3300021344	Soil	RLDGARDLYLLALALGERPDGSVFGRMIREARIHFAAVIEEARIAGLDTGAIAVMLGKLNIELADSIRPELWARVEQLLAERAALKPAKRRRSIL
Ga0209002_107482981	3300025289	Soil	LALALGDRHDGFPPFGRMIREARIHFAAVIEEARIAGLDTSAIAVMLGKSNIELADSIRPELWARVEQLLAEQGTRKRPARRGRR
Ga0209640_109519732	3300025324	Soil	DGARDLYLLALALGDRPDGSPLFGRMIREARIHFAAVIEEARIAGLDTGAIAVMLGKLNIELANSIRPELWARVEQLLAERATRKGAKRRDAR
Ga0207685_100636314	3300025905	Corn, Switchgrass And Miscanthus Rhizosphere	EARIHFAAVIEEARIAGLDTGAIAVMLGKQNIRLADSIRPELWARVEQLLTERGPRRRSS
Ga0207684_100182732	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MIREARIHFAAVVEEARIARLDTSAIAVMLGKLNIELADSIRPELWARVEQLLAEQAARRSSP
Ga0207671_105168113	3300025914	Corn Rhizosphere	RDLYLLALALGQRHDGPSLFGRMIREARIHFAAVIEEARIAGLDTSAIAVMLGKLNIELADSIRPELWTRVEQLLAERAARRSSP
Ga0207641_110309061	3300026088	Switchgrass Rhizosphere	ALALGQRHDGPSLFGRMIREARIHFAAVIEEARIAGLDTSAIAVMLGKLNIELADSIRPELWTRVEQLLAERAARRSSP
Ga0207674_118975581	3300026116	Corn Rhizosphere	LALALGERSDGSPLFGRMIREARIHFAAVIEEARIAGLDTKAIASMLGRLSSELNDSIRPELWARVEQLLAERATYPRRGAPG
Ga0257177_10278811	3300026480	Soil	LYLLALALGDRLDGAASFGRMIREARIHFAAVIEEARIAGLDTGAIAVMLGKQNIRLADSIRPELWARVEQLLTERGPRRRSSP
Ga0209967_10494061	3300027364	Arabidopsis Thaliana Rhizosphere	LGERTDGFTPFGRMILEARIHFAAVIEEARLAGLDTGAIAGMLGKPELAGSIRPELWVRLEQLLAERTARTRKDRGATGP
Ga0256866_10445451	3300027650	Soil	YLLALALGERPDGSVFGRMIREARIHFAAVIEEARIAGLDTGAIAVMLGKLNIELADSIRPELWTRVEQLLAERAPRKPAKRRGLP
Ga0209580_101078262	3300027842	Surface Soil	GARPGGSPLFGRMIQEARIHFAAVIEEARIAGLDTSSIAAMLGKMNTGVGDSIRPELWARFEQLVADRAARRGRRKSS
Ga0209283_103480672	3300027875	Vadose Zone Soil	MIREARIHFAAVIEEARIARLDTSAIAVMLGKLNIELADSIRPELWARVEQLLAEQAARRGSP
Ga0247820_100284241	3300028597	Soil	LYLLALALGERSDGSPLFGRMIREARIHFAAVIEEARIAGLDTKAIASMLGRLSSELNDSIRPELWARVEQLLAERATYPRRGAPG
Ga0247819_102092011	3300028608	Soil	IEEARIAGLDTKAIASMLGRLSSELDDSIRPELWARVEQLLAERVTYPRRGAPG
Ga0307293_100710911	3300028711	Soil	RDLYLLALALGDRPDGPSLFGRMIREARIHFAAVIEEARIAGLDTSAIAMMLGKLNIELADSIRPELWARVEQILAERAARERPVRRGPR
Ga0307307_102027961	3300028718	Soil	YLLALALGERPDGSVFGRMIREARIHFAAVIEEARIAGLDTGAIAVMLGKLNIELADSIRPELWARVEQLLAERAARKPAERQGLR
Ga0307282_100545531	3300028784	Soil	ARDLYLLALALGERPDGSVFGRMIREARIHFAAVIEEARIAGLDTGTIAVMLGKLNIELADSIRPELWVRVEQLLAERAARKPAERRGLR
Ga0307299_103551311	3300028793	Soil	RIHFAAVIEEARIAGLDTGAIAVMLGKLNIELADSIRPELWVRVEQLLAERAARKPAERRGRR
Ga0307284_100768123	3300028799	Soil	DGARDLYLLALALGERPDGSVFGRMIREARIHFAAVIEEARIAGLDTGAIAVMLGKLNIELADSIRPELWARVEQLLAERAARKPAERQGLR
Ga0247824_109845892	3300028809	Soil	MIREARIHFAAVIEEARIAGLETGAIAVMLGKLNIELADSIRPELWARVEQLVTERAVRKRAERRDTR
Ga0247825_112989772	3300028812	Soil	LDGARDLYLLALALGERSDGSPLFGRMIREARIHFAAVIEEARIAGLDTKAIASMLGRLSSELDDSIRPELWARVEQLLAERPTYPRRGAPG
Ga0307312_100013101	3300028828	Soil	RDLYLLALALGERPDGSVFGRMIREARIHFAAVIEEARIAGLDTGAIAVMLGKLNIELADSIRPELWARVEQLLAERAARKPAERRGRR
Ga0307314_100854522	3300028872	Soil	DGPALFGRMIREARIHFAAVIEEARIAGLDTGAIAVMLGKLNIELADSIRPELWARVEQLLAERAARKPAERRGLR
Ga0307278_100741783	3300028878	Soil	FGRMIREARIHFAAVIEEARIAGLDTGAIAVMLGKLNIELADSIRPELWVRVEQLLAERAARKPAERRGLR
Ga0307277_103173352	3300028881	Soil	LALGERPDGSMLWRMIREARIHFAAVIEEARIAGLDTGAIAVMLGKLNIELADSIRPELWVRVEQLLAERAARKPAERRGLR
Ga0307308_102278521	3300028884	Soil	GSVFGRMIREARIHFAAVIEEARIAGLDTGAIAVMLGKLNIELADSIRPELWARVEQLLAERAARKPAERQGLR
Ga0307304_101106843	3300028885	Soil	GRMIREARIHFAAVIEEARIAGLDTGAIAVMLGKLNIELADSIRPELWVRVEQLLAERAARKPAERRGLR
Ga0247826_104293691	3300030336	Soil	SPLFGRMIREARIHFAAVIEEARIAGLDTKAIASMLGRLSSELNDSIRPELWARVEQLLAERATYPRRGAPG
Ga0299906_109502651	3300030606	Soil	LALGDRHDRFQPFGRMIREARIHFAAVIEEARIAGLDTGAIAVMLGKLNIELADSIRPDLWAPVEQLLAEAAGKRDTRRDTRSKADRRNEREGTA
Ga0308198_10331062	3300030904	Soil	MIREARIHFAAVIEEARIAGLDTSAIAMMLGKLNIELADSIRPELWARVEQLLAERAPRERPVRRGPR
Ga0308155_10200652	3300030987	Soil	REARIHFAAVIEEARIAGLDTGAIAVMLGKLNIELADSIRPELWARVEQLLAERAARKPAERRGRR
Ga0308197_100860251	3300031093	Soil	LGARPDGPALFGRMIREARIHFAAVIEEARIAGLDTGAIAVMLGKLNIELADSIRPELWARVEQLLAERAARKPAERRGRR
Ga0308199_10303242	3300031094	Soil	SVFGRMIREARVHFAAVIEEARIAGLDTGAIAAMLGKLNIELADSIRPELWVRVEQLLAERAARKPAERRGLR
Ga0308187_101646292	3300031114	Soil	SLFGRMIREARIHFAAVIEEARIAGLDTSAIAMMLGKLNIELADSIRPELWARVEQLLAERAARERPVRRGPR
Ga0308187_104353031	3300031114	Soil	RIHFAAVIEEARIAGLDTGSIAVMLAKRNIDLADSIRPELWAAVEKLLADRVARKRAERREAR
Ga0307473_107977711	3300031820	Hardwood Forest Soil	SFGRMIREARIHFAAVIEEARIAGLDTGAIAMMLGKPNVPLADSIRPELWARVEQLLLERGARRAHRSRP
Ga0307473_112152122	3300031820	Hardwood Forest Soil	MIREARIHFAAVVEEARIAQLDTSAIAVMLGKLNIELADSIRPELWARVEQLLAEQAARRSSP
Ga0310904_111639812	3300031854	Soil	IHFAAVIEEARIAGLDTKAIASMLGRLSSELDDSIRPELWARVEQLLAERATYPRRGAPG
Ga0307414_101916384	3300032004	Rhizosphere	RDLYLLALALSNRPEGSALFGRMIREARIHFAAVIEEARIAGLDTGAIAVMLAKRNIELADSIRPELWAGVEKLLADRAARKRAERLEAR
Ga0310890_113509722	3300032075	Soil	IREARIHFAAVIEEARIAGLDTKAIASMLGRLSSELNDSIRPELWARVEQLLAERATYPRRGAPG
Ga0310812_101213793	3300032421	Soil	ALGQRHDGPSLFGRMIREARIHFAAVIEEARIAGLDTSAIAVMLGKLNIELADSIRPELWTRVEQLLAERAAQRSGP
Ga0214471_106513283	3300033417	Soil	LGERPDGSVFGRMIREARIHFAAVIEEARIAGLDTGAIAVMLGKLNIELADSIRPELWARVEQLLAERAAHTRAERRGRR
Ga0316625_1015434611	3300033418	Soil	PFGRMIREARIHFAAIIEEARIAGLDTGAIAEVLGQSNIERSIRPDLWARVEQLLTEAGDTPAQRQEAR
Ga0316620_113782341	3300033480	Soil	ALGLGQRDDGISAFGRMIREARIHFAAVIEEARVAGLETGAIAAMLGEQEIGANIRPELWARLQQLLAEAGPNRPPRL
Ga0316624_100360221	3300033486	Soil	LFGRMIQEARIHFAAVIEEARIAGLDTSSIAVMLGKMNTGVGDSIRPELWARFEQLVADRAARRGRRKSS
Ga0373900_072172_2_283	3300034078	Sediment Slurry	RLDGARDLYLLALALGARPGGSPLFGRMIQEARIHFAAVIEEARIAGLDTSSIAVMLGKMNTGVGDSIRPELWARFEQLVADRAAHRGRRKSS
Ga0364940_0086234_601_873	3300034164	Sediment	ARDLYLLALALGARHDGFAPFGRMIREARIHFAAVIEEARIAGLDTSTIAVMLGKLNIELADSIRADLWARVEQLLAEAAHKRTKRRDTR
Ga0373909_0127574_542_742	3300034191	Sediment Slurry	MIQEARIHFAAVIEEARIAGLDTSSIAVMLGKMNTGVGDSIRPELWARFEQLVADRAAHRGRRKSS
Ga0370546_036583_7_228	3300034681	Soil	LLFGRMIREARIHFAAVIEEARIAGLDTSAIAMMLGKLNIELADSIRPELWARVEQLLAERAARERPVRRGPR

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.35
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.35
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F062998

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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