NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome Family F062891

Metagenome Family F062891

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F062891
Family Type Metagenome
Number of Sequences 130
Average Sequence Length 123 residues
Representative Sequence VPTAVRELAGSLTAFGPVAPTLLRDRAGTLSACLFLPSSLDALPLARFARDLQAALVGAEIGRVASVILKLGSRRVILRSMDGESGNVTMLVGVGRIDRPGLARIELDRAATRLGALVRS
Number of Associated Samples 119
Number of Associated Scaffolds 130

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 1.54 %
% of genes near scaffold ends (potentially truncated) 96.92 %
% of genes from short scaffolds (< 2000 bps) 92.31 %
Associated GOLD sequencing projects 108
AlphaFold2 3D model prediction Yes
3D model pTM-score0.81

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Bacteria (100.000 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil
(17.692 % of family members)
Environment Ontology (ENVO) Unclassified
(20.769 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(32.308 % of family members)


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Multiple Sequence Alignments

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 31.76%    β-sheet: 24.32%    Coil/Unstructured: 43.92%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.81
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Structural matches with SCOPe domains

SCOP familySCOP domainRepresentative PDBTM-score
d.110.7.1: Roadblock/LC7 domaind1j3wa_1j3w0.71757
d.110.7.1: Roadblock/LC7 domaind6b9xc_6b9x0.69752
d.110.7.1: Roadblock/LC7 domaind6b9xb16b9x0.69419
d.110.7.0: automated matchesd6h5bb_6h5b0.69043
e.3.1.1: beta-Lactamase/D-ala carboxypeptidased2ffya_2ffy0.67529

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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 130 Family Scaffolds
PF00071Ras 30.77
PF03259Robl_LC7 7.69
PF08378NERD 3.08
PF00155Aminotran_1_2 2.31
PF00496SBP_bac_5 0.77
PF00374NiFeSe_Hases 0.77
PF00528BPD_transp_1 0.77

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 130 Family Scaffolds
COG2018Predicted regulator of Ras-like GTPase activity, Roadblock/LC7/MglB familySignal transduction mechanisms [T] 7.69
COG0374Ni,Fe-hydrogenase I large subunitEnergy production and conversion [C] 0.77
COG3259Coenzyme F420-reducing hydrogenase, alpha subunitEnergy production and conversion [C] 0.77

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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms100.00 %
UnclassifiedrootN/A0.00 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300000363|ICChiseqgaiiFebDRAFT_13209350All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium564Open in IMG/M
3300000364|INPhiseqgaiiFebDRAFT_101157437All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium517Open in IMG/M
3300002561|JGI25384J37096_10242610All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium526Open in IMG/M
3300002562|JGI25382J37095_10187162All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium633Open in IMG/M
3300005174|Ga0066680_10055041All Organisms → cellular organisms → Bacteria2345Open in IMG/M
3300005174|Ga0066680_10468038All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium794Open in IMG/M
3300005174|Ga0066680_10487856All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium776Open in IMG/M
3300005178|Ga0066688_10742619All Organisms → cellular organisms → Bacteria619Open in IMG/M
3300005186|Ga0066676_10114895All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium1652Open in IMG/M
3300005294|Ga0065705_10402052All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium881Open in IMG/M
3300005332|Ga0066388_108746593All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium503Open in IMG/M
3300005356|Ga0070674_100497339All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium1015Open in IMG/M
3300005445|Ga0070708_101147136All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium727Open in IMG/M
3300005446|Ga0066686_10139553All Organisms → cellular organisms → Bacteria1595Open in IMG/M
3300005459|Ga0068867_101360786All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium657Open in IMG/M
3300005540|Ga0066697_10265125All Organisms → cellular organisms → Bacteria1016Open in IMG/M
3300005544|Ga0070686_101452805All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium577Open in IMG/M
3300005553|Ga0066695_10654086All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium622Open in IMG/M
3300005555|Ga0066692_10452823All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium817Open in IMG/M
3300005558|Ga0066698_11013714All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium527Open in IMG/M
3300005564|Ga0070664_101167219All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium726Open in IMG/M
3300005615|Ga0070702_100877406All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium700Open in IMG/M
3300005713|Ga0066905_100767220All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium833Open in IMG/M
3300005713|Ga0066905_101337321All Organisms → cellular organisms → Bacteria646Open in IMG/M
3300006196|Ga0075422_10238840All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium760Open in IMG/M
3300006903|Ga0075426_10333389All Organisms → cellular organisms → Bacteria1113Open in IMG/M
3300006904|Ga0075424_101511746All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium712Open in IMG/M
3300006904|Ga0075424_102309735All Organisms → cellular organisms → Bacteria565Open in IMG/M
3300006914|Ga0075436_100923009All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium653Open in IMG/M
3300009147|Ga0114129_10049883All Organisms → cellular organisms → Bacteria5880Open in IMG/M
3300009147|Ga0114129_11737241All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium760Open in IMG/M
3300009795|Ga0105059_1035382All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium613Open in IMG/M
3300009799|Ga0105075_1047715All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium545Open in IMG/M
3300009818|Ga0105072_1021304All Organisms → cellular organisms → Bacteria1183Open in IMG/M
3300009821|Ga0105064_1078266All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium659Open in IMG/M
3300009822|Ga0105066_1032689All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria1060Open in IMG/M
3300009822|Ga0105066_1100833All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium638Open in IMG/M
3300009837|Ga0105058_1080199All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium752Open in IMG/M
3300010029|Ga0105074_1026544All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium976Open in IMG/M
3300010047|Ga0126382_11146563All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium692Open in IMG/M
3300010358|Ga0126370_10717167All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium881Open in IMG/M
3300010361|Ga0126378_12621355All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium576Open in IMG/M
3300010362|Ga0126377_10761234All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium1025Open in IMG/M
3300010366|Ga0126379_12732102All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium590Open in IMG/M
3300010371|Ga0134125_12141798All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium608Open in IMG/M
3300012206|Ga0137380_10531328All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium1034Open in IMG/M
3300012207|Ga0137381_10205356All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria1708Open in IMG/M
3300012349|Ga0137387_10381211All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium1022Open in IMG/M
3300012685|Ga0137397_10683707All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium762Open in IMG/M
3300012918|Ga0137396_10001197All Organisms → cellular organisms → Bacteria13398Open in IMG/M
3300012918|Ga0137396_10598298All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium816Open in IMG/M
3300012922|Ga0137394_10806144All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium787Open in IMG/M
3300012930|Ga0137407_11389029All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium667Open in IMG/M
3300012944|Ga0137410_10600072All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium910Open in IMG/M
3300015358|Ga0134089_10565934All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium505Open in IMG/M
3300015372|Ga0132256_100030173All Organisms → cellular organisms → Bacteria4900Open in IMG/M
3300016270|Ga0182036_10090477All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria2052Open in IMG/M
3300017659|Ga0134083_10388037All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium607Open in IMG/M
3300018074|Ga0184640_10433383All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium587Open in IMG/M
3300021073|Ga0210378_10076997All Organisms → cellular organisms → Bacteria1306Open in IMG/M
3300025885|Ga0207653_10383856All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium550Open in IMG/M
3300025899|Ga0207642_10153822All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium1227Open in IMG/M
3300025937|Ga0207669_10451043All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium1019Open in IMG/M
3300025938|Ga0207704_10930549All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium732Open in IMG/M
3300025961|Ga0207712_10677713All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium898Open in IMG/M
3300026089|Ga0207648_10536410All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium1073Open in IMG/M
3300026298|Ga0209236_1040849All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium2390Open in IMG/M
3300026310|Ga0209239_1062218All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium1651Open in IMG/M
3300026313|Ga0209761_1105912All Organisms → cellular organisms → Bacteria1395Open in IMG/M
3300026324|Ga0209470_1129923All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria1114Open in IMG/M
3300026325|Ga0209152_10098455All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium1099Open in IMG/M
3300026333|Ga0209158_1212028All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium672Open in IMG/M
3300026334|Ga0209377_1072225All Organisms → cellular organisms → Bacteria1482Open in IMG/M
3300026528|Ga0209378_1160912All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium866Open in IMG/M
3300026537|Ga0209157_1066409All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium1830Open in IMG/M
3300026537|Ga0209157_1140399All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria1097Open in IMG/M
3300026547|Ga0209156_10172936All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium1040Open in IMG/M
3300027384|Ga0209854_1001307All Organisms → cellular organisms → Bacteria3559Open in IMG/M
3300027511|Ga0209843_1010497All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria1963Open in IMG/M
3300027561|Ga0209887_1026302All Organisms → cellular organisms → Bacteria1362Open in IMG/M
3300027577|Ga0209874_1063020All Organisms → cellular organisms → Bacteria937Open in IMG/M
3300027846|Ga0209180_10113243All Organisms → cellular organisms → Bacteria1553Open in IMG/M
3300027846|Ga0209180_10739142All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium532Open in IMG/M
3300027862|Ga0209701_10569835All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium605Open in IMG/M
3300027874|Ga0209465_10101424All Organisms → cellular organisms → Bacteria1412Open in IMG/M
3300027903|Ga0209488_10095629All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria2223Open in IMG/M
3300027909|Ga0209382_12247745All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium514Open in IMG/M
3300027947|Ga0209868_1009770All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium931Open in IMG/M
3300027961|Ga0209853_1178321All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium501Open in IMG/M
3300028673|Ga0257175_1036618All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium869Open in IMG/M
3300028792|Ga0307504_10026793All Organisms → cellular organisms → Bacteria1491Open in IMG/M
3300028792|Ga0307504_10389848All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium545Open in IMG/M
(restricted) 3300031150|Ga0255311_1041110All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium970Open in IMG/M
3300031538|Ga0310888_10141726All Organisms → cellular organisms → Bacteria1272Open in IMG/M
3300031547|Ga0310887_10954454All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium545Open in IMG/M
3300031561|Ga0318528_10201904All Organisms → cellular organisms → Bacteria1064Open in IMG/M
3300031640|Ga0318555_10023618All Organisms → cellular organisms → Bacteria2921Open in IMG/M
3300031681|Ga0318572_10727432All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium591Open in IMG/M
3300031682|Ga0318560_10147730All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium1243Open in IMG/M
3300031720|Ga0307469_11823674All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium588Open in IMG/M
3300031740|Ga0307468_100226375All Organisms → cellular organisms → Bacteria1291Open in IMG/M
3300031764|Ga0318535_10072548All Organisms → cellular organisms → Bacteria1474Open in IMG/M
3300031768|Ga0318509_10107218All Organisms → cellular organisms → Bacteria1511Open in IMG/M
3300031771|Ga0318546_10008322All Organisms → cellular organisms → Bacteria5367Open in IMG/M
3300031777|Ga0318543_10406730All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium610Open in IMG/M
3300031779|Ga0318566_10358285All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium719Open in IMG/M
3300031781|Ga0318547_10068701All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria1957Open in IMG/M
3300031796|Ga0318576_10477506All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium588Open in IMG/M
3300031797|Ga0318550_10127184All Organisms → cellular organisms → Bacteria1216Open in IMG/M
3300031832|Ga0318499_10268627All Organisms → cellular organisms → Bacteria661Open in IMG/M
3300031846|Ga0318512_10293144All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium808Open in IMG/M
3300031893|Ga0318536_10674694All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium515Open in IMG/M
3300031910|Ga0306923_11273862All Organisms → cellular organisms → Bacteria781Open in IMG/M
3300031942|Ga0310916_10514915All Organisms → cellular organisms → Bacteria1019Open in IMG/M
3300031943|Ga0310885_10284043All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium850Open in IMG/M
3300031944|Ga0310884_10452599All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium746Open in IMG/M
3300031959|Ga0318530_10353767All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium608Open in IMG/M
3300031981|Ga0318531_10301635All Organisms → cellular organisms → Bacteria724Open in IMG/M
3300032000|Ga0310903_10084109All Organisms → cellular organisms → Bacteria1317Open in IMG/M
3300032012|Ga0310902_10310404All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium974Open in IMG/M
3300032013|Ga0310906_10162906All Organisms → cellular organisms → Bacteria1315Open in IMG/M
3300032063|Ga0318504_10345197All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium707Open in IMG/M
3300032067|Ga0318524_10101684All Organisms → cellular organisms → Bacteria1425Open in IMG/M
3300032075|Ga0310890_11032981All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium662Open in IMG/M
3300032090|Ga0318518_10320870All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium795Open in IMG/M
3300032094|Ga0318540_10409374All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium655Open in IMG/M
3300032180|Ga0307471_100438010All Organisms → cellular organisms → Bacteria1443Open in IMG/M
3300032180|Ga0307471_102721745All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium627Open in IMG/M
3300032211|Ga0310896_10448846All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium698Open in IMG/M
3300032770|Ga0335085_10947633All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium934Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).


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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil17.69%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil15.38%
Groundwater SandEnvironmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand10.77%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil10.00%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil6.92%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere6.15%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil3.85%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil3.85%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil3.08%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil3.08%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere3.08%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere2.31%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil1.54%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil1.54%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil1.54%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere1.54%
Groundwater SedimentEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment0.77%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment0.77%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil0.77%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere0.77%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Soil0.77%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere0.77%
Sandy SoilEnvironmental → Terrestrial → Soil → Sand → Unclassified → Sandy Soil0.77%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere0.77%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere0.77%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere0.77%

Visualization
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Associated Samples

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Taxon OIDSample NameHabitat TypeIMG/M Link
3300000363Soil microbial communities from Great Prairies - Iowa, Continuous Corn soilEnvironmentalOpen in IMG/M
3300000364Soil microbial communities from Great Prairies - Iowa, Native Prairie soilEnvironmentalOpen in IMG/M
3300002561Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_40cmEnvironmentalOpen in IMG/M
3300002562Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_40cmEnvironmentalOpen in IMG/M
3300005174Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129EnvironmentalOpen in IMG/M
3300005178Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137EnvironmentalOpen in IMG/M
3300005186Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125EnvironmentalOpen in IMG/M
3300005294Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk SoilEnvironmentalOpen in IMG/M
3300005332Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300005356Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaGHost-AssociatedOpen in IMG/M
3300005445Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaGEnvironmentalOpen in IMG/M
3300005446Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135EnvironmentalOpen in IMG/M
3300005459Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2Host-AssociatedOpen in IMG/M
3300005540Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_146EnvironmentalOpen in IMG/M
3300005544Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaGEnvironmentalOpen in IMG/M
3300005553Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144EnvironmentalOpen in IMG/M
3300005555Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141EnvironmentalOpen in IMG/M
3300005558Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147EnvironmentalOpen in IMG/M
3300005564Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaGHost-AssociatedOpen in IMG/M
3300005615Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaGEnvironmentalOpen in IMG/M
3300005713Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)EnvironmentalOpen in IMG/M
3300006196Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1Host-AssociatedOpen in IMG/M
3300006903Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5Host-AssociatedOpen in IMG/M
3300006904Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3Host-AssociatedOpen in IMG/M
3300006914Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5Host-AssociatedOpen in IMG/M
3300009147Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)Host-AssociatedOpen in IMG/M
3300009795Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N3_40_50EnvironmentalOpen in IMG/M
3300009799Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N2_0_30EnvironmentalOpen in IMG/M
3300009818Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_30_40EnvironmentalOpen in IMG/M
3300009821Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S1_20_30EnvironmentalOpen in IMG/M
3300009822Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S1_30_40EnvironmentalOpen in IMG/M
3300009837Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_20_30EnvironmentalOpen in IMG/M
3300010029Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S1_10_20EnvironmentalOpen in IMG/M
3300010047Tropical forest soil microbial communities from Panama - MetaG Plot_30EnvironmentalOpen in IMG/M
3300010358Tropical forest soil microbial communities from Panama - MetaG Plot_3EnvironmentalOpen in IMG/M
3300010361Tropical forest soil microbial communities from Panama - MetaG Plot_23EnvironmentalOpen in IMG/M
3300010362Tropical forest soil microbial communities from Panama - MetaG Plot_22EnvironmentalOpen in IMG/M
3300010366Tropical forest soil microbial communities from Panama - MetaG Plot_24EnvironmentalOpen in IMG/M
3300010371Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1EnvironmentalOpen in IMG/M
3300012206Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaGEnvironmentalOpen in IMG/M
3300012207Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaGEnvironmentalOpen in IMG/M
3300012349Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaGEnvironmentalOpen in IMG/M
3300012685Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaGEnvironmentalOpen in IMG/M
3300012918Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaGEnvironmentalOpen in IMG/M
3300012922Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaGEnvironmentalOpen in IMG/M
3300012930Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012944Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300015358Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_40cm_5_24_1 metaGEnvironmentalOpen in IMG/M
3300015372Soil combined assemblyHost-AssociatedOpen in IMG/M
3300016270Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080EnvironmentalOpen in IMG/M
3300017659Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_5_24_1 metaGEnvironmentalOpen in IMG/M
3300018074Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_200_b2EnvironmentalOpen in IMG/M
3300021073Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60_b1 redoEnvironmentalOpen in IMG/M
3300025885Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025899Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300025937Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025938Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300025961Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300026089Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026298Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_40cm (SPAdes)EnvironmentalOpen in IMG/M
3300026310Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_2_20cm (SPAdes)EnvironmentalOpen in IMG/M
3300026313Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_40cm (SPAdes)EnvironmentalOpen in IMG/M
3300026324Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125 (SPAdes)EnvironmentalOpen in IMG/M
3300026325Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107 (SPAdes)EnvironmentalOpen in IMG/M
3300026333Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140 (SPAdes)EnvironmentalOpen in IMG/M
3300026334Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141 (SPAdes)EnvironmentalOpen in IMG/M
3300026528Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156 (SPAdes)EnvironmentalOpen in IMG/M
3300026537Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135 (SPAdes)EnvironmentalOpen in IMG/M
3300026547Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124 (SPAdes)EnvironmentalOpen in IMG/M
3300027384Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S3_30_40 (SPAdes)EnvironmentalOpen in IMG/M
3300027511Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S1_20_30 (SPAdes)EnvironmentalOpen in IMG/M
3300027561Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_30_40 (SPAdes)EnvironmentalOpen in IMG/M
3300027577Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_20_30 (SPAdes)EnvironmentalOpen in IMG/M
3300027846Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300027862Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300027874Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes)EnvironmentalOpen in IMG/M
3300027903Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)EnvironmentalOpen in IMG/M
3300027909Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)Host-AssociatedOpen in IMG/M
3300027947Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N3_40_50 (SPAdes)EnvironmentalOpen in IMG/M
3300027961Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S1_30_40 (SPAdes)EnvironmentalOpen in IMG/M
3300028673Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NI-69-BEnvironmentalOpen in IMG/M
3300028792Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 19_SEnvironmentalOpen in IMG/M
3300031150 (restricted)Sandy soil microbial communities from University of British Columbia, Vancouver, Canada - EtOH4_T0_E4EnvironmentalOpen in IMG/M
3300031538Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D1EnvironmentalOpen in IMG/M
3300031547Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D4EnvironmentalOpen in IMG/M
3300031561Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f26EnvironmentalOpen in IMG/M
3300031640Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f23EnvironmentalOpen in IMG/M
3300031681Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f20EnvironmentalOpen in IMG/M
3300031682Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f22EnvironmentalOpen in IMG/M
3300031720Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515EnvironmentalOpen in IMG/M
3300031740Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05EnvironmentalOpen in IMG/M
3300031764Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f27EnvironmentalOpen in IMG/M
3300031768Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f22EnvironmentalOpen in IMG/M
3300031771Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19EnvironmentalOpen in IMG/M
3300031777Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f24EnvironmentalOpen in IMG/M
3300031779Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f22EnvironmentalOpen in IMG/M
3300031781Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20EnvironmentalOpen in IMG/M
3300031796Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f24EnvironmentalOpen in IMG/M
3300031797Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f23EnvironmentalOpen in IMG/M
3300031832Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f25EnvironmentalOpen in IMG/M
3300031846Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f19EnvironmentalOpen in IMG/M
3300031893Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f28EnvironmentalOpen in IMG/M
3300031910Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)EnvironmentalOpen in IMG/M
3300031942Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176EnvironmentalOpen in IMG/M
3300031943Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D2EnvironmentalOpen in IMG/M
3300031944Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D1EnvironmentalOpen in IMG/M
3300031959Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f24EnvironmentalOpen in IMG/M
3300031981Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f25EnvironmentalOpen in IMG/M
3300032000Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D3EnvironmentalOpen in IMG/M
3300032012Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D3EnvironmentalOpen in IMG/M
3300032013Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D3EnvironmentalOpen in IMG/M
3300032063Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f17EnvironmentalOpen in IMG/M
3300032067Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f22EnvironmentalOpen in IMG/M
3300032075Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D3EnvironmentalOpen in IMG/M
3300032090Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f22EnvironmentalOpen in IMG/M
3300032094Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f25EnvironmentalOpen in IMG/M
3300032180Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515EnvironmentalOpen in IMG/M
3300032211Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D1EnvironmentalOpen in IMG/M
3300032770Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID Sample Taxon ID Habitat Sequence
ICChiseqgaiiFebDRAFT_1320935023300000363SoilELRAAIVPPGVRELADSLTAFGTVAPTLLRDRTGALSACLFLPTSLDAVPLAKFACDLHAALEGAEIGRMASVILKLASHRVVLRAMDGVSGTVTMLVGGGRIERPGLARIELDRAAMRLGALVGG*
INPhiseqgaiiFebDRAFT_10115743723300000364SoilLAGSLTAFRPGAPTLLRDHSGTLNACLFLPSSLEAVPLAQFARDLHAALASAEIGRIASVTLKLGARRVILKSMDGAAGHVTMLVGVGRIDRPGLARIELDRAATRLPALVRG*
JGI25384J37096_1024261013300002561Grasslands SoilAGEARAGSGNGKHAGTSGDPLRETELRITTVPPSVRELAGSLTAFGPVAPTVLRDTAGALSACLFLPSSLEALPLAEFARDLYGVLEEAEIGAVASVIVKMGAHRLVVRAVDGVSGRAMLVGGGPIDRPGLARIELDRAATRLGALVRG*
JGI25382J37095_1018716213300002562Grasslands SoilSGPGEETALRATVVPSSVRDLAGSLTAFGPVAPTMVRDAGGSFRVCLFLPGSLEPLPLAQFARDLFGALEGAEIGRVGSVILRLGTHRLISRIVESVSGHATILVGGGPIARPGLARIELDRAATQLGALGRG*
Ga0066680_1005504163300005174SoilLRDTAGALSACLFLPSSLEALPLAEFARDLYGVLEEAEIGAVASVIVKMGAHRLVVRAVDGVSGRAMLVGGGPIDRPGLARIELDRAATRLGALVRG*
Ga0066680_1046803813300005174SoilRIELRAANVPAAVRELAGSLTAFGPVSPTLLCDHAGALSACLFLPSSLDALPLARFARDLHLALEGAEVGRMVSVVLKLGAHRLVLRAMDGVSGSVTMLVGVGRIDRPGLARIELDRAATRLGALVRS*
Ga0066680_1048785623300005174SoilTAFGPVAPTVLRDTAGSLRACLFLPRSFEAMPLAQFARDLYAALEAAEIGQVSSVILRVGAHRLVVRAMDGVPGRAAMLVGGGPIDRPGLARIELDRAATRLGALVRG*
Ga0066688_1074261923300005178SoilGIELRAATVPTAVRELAGSLTAFGPVAPTLLRDRAGTLSACLFLPSSLDALPLARFARDLQAALVGAEIGRVASVILKLGSRRVILRSMDGESGNVTMLVGVGLIDRPGLARIELDRAATRLGALVRS*
Ga0066676_1011489523300005186SoilPVRELADSLTAFGPVAPTVLRDGEGSLSACLFLPPSVEAVPLAELARDLYAALDGAEIGPVTSVTLRLGEHRIVLRTLTGTSVLPTMLVGGGPIDRPGLARIELERAAERLGALAEA*
Ga0065705_1040205223300005294Switchgrass RhizosphereLRDHAGELSACLFLPSSLDALPLARFARDLHLALEDAEVGRVASVILKLGGHRLVLRTIDGVSGSVTMLVGVGRVERPGLARIELDRAASRLGALVRS*
Ga0066388_10874659323300005332Tropical Forest SoilVPAAVREVAGSLTAFGAVTPTLLRDHAGTLSACLFLPRSLDALPLAGFARDLHLALAGAEIGPVTSLTLKLGAHRLVLRALNGASGHVTMLMGVGPVDRPGLARIELDRAASRLGPLVGA
Ga0070674_10049733913300005356Miscanthus RhizosphereDSLTAFGTVAPTLLRDRAGALSACLFLPTSLDAVPLARFARDLHAALEGTEIGRIASVILKLGSHRVVLRAMDGVSGTVTMLVGGARIDRPGLARIELDRAATRLGALVGG*
Ga0070708_10114713613300005445Corn, Switchgrass And Miscanthus RhizosphereNGKHAEPRSELGARIELRAANVPAAVRELAGSLTAFGPVSPTLLCDHAGALSACLFLPSSLDALPLARFARDLHLALEGAEVGRMVSVVLKLGAHRLVLRAMDGVSGSVTMLVGVGRIDRPGLARIELDRAATRLGALVRS*
Ga0066686_1013955333300005446SoilAGAGLELRAANVPAAVRDLAGSLTAFGPVSPTLLRDHAGALSACLFLPSSLDALPLARFARDLHLALEGAEVGPVTSVILKLGAHRLVLRAMDGASGSVTMLVGVGRIDRPGLARIELDRAATRLGALVRS*
Ga0068867_10136078623300005459Miscanthus RhizosphereRAAIVPPGVRELADSLTAFGTVAPTLLRDRAGALSACLFLPTSLDAVPLARFARDLHAALEGTEIGRIASVILKLGSHRVVLRAMDGVSGTVTMLVGGGRIDRPGLARIELDRAATRLGALVGG*
Ga0066697_1026512513300005540SoilQAVGEGGNGKRSGPENDSGAGIELRAATVPTAVRELAGSLTAFGPVAPTLLRDRAGTLSACLFLPSSLDALPLARFARDLQAALVGAEIGRVASVILKLGSRRVILRSMDGESGNVTMLVGVGRIDRPGLARIELDRAATRLGALVRS*
Ga0070686_10145280513300005544Switchgrass RhizosphereAAIVPPGVRELADSLTAFGTVAPTLLRDRAGALSACLFLPTSLDAVSLARFARDLHAALEGTEIGRIASVILKLGSHRVVLRAMDGVSGTVTMLVGGGRIDRPGLARIELDRAATRLGALVGG*
Ga0066695_1065408613300005553SoilTELRITTVPPSVRELAGSLTAFGPVAPTVLRDTAGALSACLFLPSSLEALPLAEFARDLYGVLEEAEIGAVASVIVKMGAHRLVVRAVDGVSGRAMLVGGGPIDRPGLARIELDRAATRLGALVRG*
Ga0066692_1045282313300005555SoilRIELRAANVPAAVRELAGSLTAFGPVSPTLLCDHAGALSACLFLPSSLDALPIARFARDLHLALEGAEVGRMVSVVLKLGAHRLVLRAMDGVSGSVTMLVGVGRIDRPGLARIELDRAATRLGALVRS*
Ga0066698_1101371413300005558SoilSSVRDLAGSLTAFGPVAPTMMRDAGGSFRVCLFLPGSLEPLPLAQFARDLFGALEGAEIGRVGSVILRLGTHRLISRIVESVSGHATILVVGGPIARPGLARIELDRAATQLGALGRG*
Ga0070664_10116721923300005564Corn RhizosphereADAGNVAGAERDLRTANVPPAVHELASSLTAFGSVAATMLRDRDGALSACLFLPRSLDAMPLARFAHDLYELLEGAEIGPVTSVILKLGSHRVVLRAMDGAAGHVTMLVGGGRIDRPGLARIELDRAASRLGALVEG*
Ga0070702_10087740613300005615Corn, Switchgrass And Miscanthus RhizosphereAFGTVAPTLLRDRAGALRACLFLPTSLDAVSLARFARDLHAALEGTEIGRIASVILKLGSHRVVLRAMDGVSGTVTMLVGGARIDRPGLARIELDRAATRLGALVGG*
Ga0066905_10076722013300005713Tropical Forest SoilSLTAFGPVTPTLLCDQAGTLSAYLFLPSTLDAPPLARFARDVEGALEGAEIGQVASVILNLGVHRMVLRAIDGASGHVTMLVGVGRIDRPGLARIELERAATRLGDLVRS*
Ga0066905_10133732123300005713Tropical Forest SoilDSSAGIELRATAVPTAVRELAGSLTAFGPVAPTLLRDRAGLLSACLFLPSSLDALPLARFARDLYGALGGAEIGRVASVILKLGARRVILRSMDGEAGNVTMLVGVGRIDRPGLARIELDRAATRLEALVRS*
Ga0075422_1023884013300006196Populus RhizosphereLTAFGPVAPTLLRDHAGVLSACLFLPRSLDALPLARFARDLHLALDGAELGAITSVILKLGTHRLVLRALSGASGHVTMLMGVGRVDRPGLARIELDRAASRLGALMGA*
Ga0075426_1033338913300006903Populus RhizosphereAAVRELAGSLTAFGPVSPTLLRDRSGALSACLFLPSSLDALPLAGFAHDLQAALAGSEVGRVASVVLKLGAHRVVLRAMDGASGDATMLVGAGRIDRPGLARIELDRAATRLGALVGG*
Ga0075424_10151174613300006904Populus RhizosphereNGAGAERELRTTNVPPAVHELASSLTAFGSVAATMLRDRDGALSACLFLPRSLDAMPLARFAHDLYEVLEGAEIGPITSVILKLGGHRVVLRSMDGAGGHVTMLVGGGRIDRPGLARIELDRAASRLGALVEG*
Ga0075424_10230973523300006904Populus RhizosphereSSDPGSGIELRAATVPAAVREVAGTLTAFGPVAPTLLRDHAGVLSACLFLPRSLDALPLARFARDLHLALDGAEIGVITSVILKLGTHRLVLRALSGASGHVTMLMGVGRVDRPGLARIELDRAASRLGALMGA*
Ga0075436_10092300913300006914Populus RhizosphereASSLTAFGSVAATMLCDRDGALSACLFLPRSLDAMPLARFAHDLYEVLAGAEIGPVTSVILKLGSHRVVLRAMDGAAGHVTMLVGGGRIERPGLARIELDRAASRLGALVEG*
Ga0114129_1004988373300009147Populus RhizosphereELRAANVPAAVRDLAGSLTAFGPVSPTLLRDHAGALSACLFLPSSLDALPLARFARDLHLALEDAEVGRVASVILKLGVHRLVLRTIDGVSGSVTILVGVGRIERPGLARIELDRAASRLGALVRS*
Ga0114129_1173724123300009147Populus RhizosphereTAFGPVSPTLLCDHAGALSACLFLPSSLDALPLARFARDLHLALEGAEVGPVTSVILKLGAHRLVLRAMDGASGGVTMLVGVGRIDRPGLARIELDRAATRLGALVRS*
Ga0105059_103538223300009795Groundwater SandARGSPRNGKHSGPSGESGGATELRATTVPLSVRELAGSLTAFGPVAPTVLRDTAGSLRACLFLPSSLEALPLAQFARDLYGALDGTELGEVSSVVLRVGAHRIVLRAMDGASGGATMLVGGGPIDRLGLARIELDRAATRLGALVRG*
Ga0105075_104771513300009799Groundwater SandRHAGSSGDGDERADLRATVVPPSVRELAGSLTAFGPVAPTVLRDPAGALRACLFLPRTLEALPLARFARDLYAALEGSELGEVSSVTLRVGAQRVVLRAMDGASGEATMLVGAGPVDRPGLARIELDRAATRLGALVRS*
Ga0105072_102130413300009818Groundwater SandAFGPVAPIVLRDPAGALRACLFLPRTLEALPLARFARELYAALEGSELGEVSSVTLRVGAQRVVLRAMDGASGEATMLVGAGPVDRPGLARIELDRAATRLGALVRS*
Ga0105064_107826613300009821Groundwater SandQSVRELAGSLTAFGPVAPTVLRDTAGSLRACLFLPRSLEAMPLAQFVRDLYAALEEAEIGQVSSVILRVGAHRLVVRAMDGVPGRAAMLVGGGPIDRPGLARIELDRAATRLGALVRG*
Ga0105066_103268913300009822Groundwater SandVLRDTAGSLRACLFLPRSLEAMPLAQFVRDLYAALEEAEIGQVSSVILRVGAHRLLVRAMDGVPGRAAMLVGGGPIDRPGLARIELDRAATRLGALVRG*
Ga0105066_110083323300009822Groundwater SandEARGSPRNGKHSGPSGESGGATELRATTVPPSVRELAGSLTAFGPIAPTVLRDTAGSLRACLFLPSSLEALPLAQFARDLYGALDGTELGEVSSVVLRVGAHRIVLRAMDGASGGATMLVGGGPIDRLGLARIELDRAATRLGALVRG*
Ga0105058_108019923300009837Groundwater SandVPESVRELAGSLTAFGPVAPTVLRDTAGSLRACLFLPRSLEAMPLAQFAQDLYAALEEAEIGQVSSVILRVGAHRLVVRAMDGVPGRAAMLVGGGPIDRPGLARIELDRAAMRLGALVRG
Ga0105074_102654423300010029Groundwater SandPSVRELAGSLTAFGPVAPTVLRDPAGALRACLFLPRTLEALPLARFARDLYAALEGSELGEVSSVTLRVGAQRVVLRAMDGASGEATMLVGAGPVDRPGLARIELDRAATRLGALVRS*
Ga0126382_1114656313300010047Tropical Forest SoilSSLTAFGPVTPTLLCDEAGALSTYLFLPSALDAQPLARFARDVDDALEGAEIGRVGSVILNLGAHRMVLRAIDGASGHVTMLVGVGRIDRPGLARIELERAATRLGDLVRS*
Ga0126370_1071716723300010358Tropical Forest SoilTAFGSVAPTVLRDRAGLLNACLFLPSSFAALPLAGFARDLHAALEDAEIGPVASVIVKLGDDRIVLRAMDGAPGSVTMLVGGGRVERPGLARIELDRAASRLGALVRG*
Ga0126378_1262135523300010361Tropical Forest SoilHPASVPPAIHELAGSLTAFGSVAPTVLRDRSGLLSACLFLPSSLDALPLAGFARDLHVALEGAEIGPVASVILKLGSDRIVLRAMDGAPGNVTMLVGVGRIERPGLARIELDRAASRLDALVRG*
Ga0126377_1076123423300010362Tropical Forest SoilSNVDIELRTTAVPTAVRELAGALTAFGPVAPTLLRDRTGLLSACLFLPSSLDALPLAQFARDLYGALGGAEIGRVASVILKLGARRVILRSMDGESGNVTMLVGVGRIDRPGLARIELDRAATRLAALVGS*
Ga0126379_1273210213300010366Tropical Forest SoilGIELRTTAVPTAVRELAGALTAFGPVAPTLLRDRAGLLSACLFLPSSLDALPLAQFARDLYGALGGAEIGRVASVILKLGARRVILRSMDGESGNVTMLVGVGRIDRPGLARIELDRAATRLAALVGS*
Ga0134125_1214179813300010371Terrestrial SoilAQVTRANGKHADAGNVAGAERDLRTANVPPAVHELASSLTAFGSVAATMLRDRDGALSACLFLPRSLDAMPLARFAHDLYELLEGAEIGPVTSVILKLGSHRVVLRAMDGAAGHVTMLVGGGRIDRPGLARIELDRAASRLGALVEG*
Ga0137380_1053132833300012206Vadose Zone SoilELAGSLTAFGPVAPTVLRDTAGALSACLFLPSSLEALPLAEFARDLYGVLEEAEIGAVASVIVKMGAHRLVVRAVDGVSGRAMLVGGGPIDRPGLARIELDRAATRLGALVRG*
Ga0137381_1020535643300012207Vadose Zone SoilPELRAATVPPGVRELADSLTAFGTVAPTLLRDRTGALSACLFLPTSLDAVPLARFARDLHAALEGTEIGRIASVILKLGSHRVVLRAMDGVSGTVTMLVGGGRIDRPGLARIELDRAATRLGALVGG*
Ga0137387_1038121113300012349Vadose Zone SoilDPAEEMELRATSVPQSVRELAGSLTAFGPVAPTVLRDTAGSLRACLFLPRSLEAMPLAQFARDLYAALEEAEIGQVSSVILRVGAHRLVVRAMDGVPGRAAMLVGGGPIDRPGLARIELDRAATRLGALVRG*
Ga0137397_1068370723300012685Vadose Zone SoilDSSAGIELREASVPTAVRELAGSLTAFGPVAPTLLRDRAGALSACLFLPSSLEALPLARFARDLHAALGGAEIGRVASIILKLGARRVVLRTMDGRSGTVTMLVGGGPIDRPGLARIELDRAATRLGILVGG*
Ga0137396_1000119713300012918Vadose Zone SoilRSGPGAEIELRAANVPAAVRELAGSLTAFGPVSPTLLCDHAGALNACLFLPSSLDAVPIARFARDLHLALEGAEVGRVASVILKLGAHRLVSRAMDGASGNVTMLVGVGRIDRPGLARIELDRAAACLGALVRS*
Ga0137396_1059829833300012918Vadose Zone SoilAFGPVAPTMMRDAGGSFRVCLFLPGSLEPLPLAQFARDLFGALEGAEIGRVGSVILRLGTHRLISRIVESASGHATILVGGGPIARPGLARIELDRAATRLGALGRG*
Ga0137394_1080614423300012922Vadose Zone SoilSLTAFGTVAPTLLRDRAGTLSACLFLPTSLDAVPLARFARDLHAALEGTEIGRIASVILKLGSHRVVLRAMDGVSGTVTMLVGGGRIDRPGLARIELDRAATRLGALVGG*
Ga0137407_1138902913300012930Vadose Zone SoilLRAAIVPPGVRELADSLTAFGTVAPTLLRDRAGTLSACLFLPTSLDAVPLARFARDLHAALEGTEIGRIASVILKLGSHRVVLRAMDGVSGTVTMLVGGGRIDRPGLARIELDRAATRLGALVGG*
Ga0137410_1060007213300012944Vadose Zone SoilHELAGSLTAFGPVAPTLLRDRAGSLSALLFLPASLEALPLARFARELHGALEDAEIGRVASVILKLGAHRLVLRAVDGVSGNVTMLVGVGRIDRPGLARIELDRAAARLGALVRS*
Ga0134089_1056593413300015358Grasslands SoilMELRATSVPQSVRELAGSLTAFGPVAPTMLRDTAGSLRACLFLPRSLEAMPLAQFARDLYAALEEAEIGQVSSVILRVGGHRLVVRAMDGVPGRAAMLVGGGPIDRPGLARIELDRAATRLGAIVR
Ga0132256_10003017313300015372Arabidopsis RhizosphereGRHSGPSSDPGSGIELRATSVPAAVREVEGSLTSLPGVAPTLLRDHGGALSACLFLPRSLDALPLARFARDLHLALDGAEIGAITSVILKLGAHRLVLRALSGASGHVTMLMGVGRVDRPGLARIELDRAASRLGALMGA*
Ga0182036_1009047713300016270SoilAAREAGRDPDGGMRDGFQNHSGAEAELHPASVPPAVRDLAGSLTAFGSVAPTVLRDRAGLLSACLFLPSSFDALPLAGFARDLHATLEGAEIGPVASVILKLGSDRIVLRAMDGAPGNVTMLVGVGRIERPGLARIELDRAASRLDALVRG
Ga0134083_1038803723300017659Grasslands SoilTAFGPVSPTLLRDHAGALSACLFLPSSLDALPLARFARDLHLALEGAEVGPVTSVILKLGAHRLVLRAMDGASGSVTMLVGVGRIDRPGLARIELDRAATRLGALVRS
Ga0184640_1043338323300018074Groundwater SedimentAFGPVAPTVVRDAGGSFRVCLFLPGSLEALPLAQFARDLCGALEKAEIGRVASVILRLGTHRLILRSVESASGHATILVGGGPVARPGLARIELDRAATRLGAFGQG
Ga0210378_1007699713300021073Groundwater SedimentVVPSSVRELAGSLTAFGPVAPTVVRDAGGSFRVCLFLPGSLDALPLAQFARDLCGALEKAEIGPVASVILRLGTHRLILRSVESASGHATILVVGGPVARPGLARIELDRAATRLGAFGQ
Ga0207653_1038385613300025885Corn, Switchgrass And Miscanthus RhizosphereVPPGVRELADSLTAFGTVAPTLLRDRAGALRACLFLPTSLDALALARFARDLHAALEGTEIGRIASVILKLGSHRVVLRAMDGVSGTVTMLVGGGRI
Ga0207642_1015382213300025899Miscanthus RhizosphereAIVPPGVRELADSLTAFGTVAPTLLRDRAGALSACLFLPTSLDAVSLARFARDLHAALEGTEIGRIASVILKLGSHRVVLRAMDGVSGTVTMLVGGGRIDRPGLARIELDRAVTRLEALVGG
Ga0207669_1045104313300025937Miscanthus RhizosphereADSLTAFGTVAPTLLRDRAGALSACLFLPTSLDAVPLARFARDLHAALEGTEIGRIASVILKLGSHRVVLRAMDGVSGTVTMLVGGARIDRPGLARIELDRAATRLGALVGG
Ga0207704_1093054913300025938Miscanthus RhizosphereAIVPPGVRELADSLTAFGTVAPTLLRDRAGALSACLFLPTSLDAVSLARFARDLHAALEGTEIGRIASVILKLGSHRVVLRAMDGVSGTVTMLVGGGRIDRPGLARIELDRAATRLGALVGG
Ga0207712_1067771323300025961Switchgrass RhizosphereAAIVPPGVRELADSLTAFGTVAPTLLRDRAGALRACLFLPTSLDAVSLARFARDLHAALEGTEIGRIASVILKLGSHRVVLRAMDGVSGTVTMLVGGGRIDRPGLARIELDRAATRLGALVGG
Ga0207648_1053641013300026089Miscanthus RhizospherePGVRELADSLTAFGTVAPTLLRDRAGALSACLFLPTSLDAVPLARFARDLHAALEGTEIGRIASVILKLGSHRVVLRAMDGVSGTVTMLVGGARIDRPGLARIELDRAATRLGALVGG
Ga0209236_104084933300026298Grasslands SoilGPGEETALRATVVPSSVRDLAGSLTAFGPVAPTMVRDAGGSFRVCLFLPGSLEPLPLAQFARDLFGALEGAEIGRVGSVILRLGTHRLISRIVESVSGHATILVGGGPIARPGLARIELDRAATQLGALGRG
Ga0209239_106221823300026310Grasslands SoilVPTAVRELAGSLTAFGPVAPTLLRDRAGTLSACLFLPSSLDALPLARFARDLQAALVGAEIGRVASVILKLGSRRVILRSMDGESGNVTMLVGVGRIDRPGLARIELDRAATRLGALVRS
Ga0209761_110591233300026313Grasslands SoilVREAQLGTSNGKHAEPRSELGARIELRAANVPAAVRELAGSLTAFGPVSPTLLCDHAGALSACLFLPSSLDALPIARFARDLHLALEGAEVGRMVSVVLKLGAHRLVLRAMDGVSGSVTMLVGVGRIDRPGLARIELDRAATRLGALVRS
Ga0209470_112992333300026324SoilPAAVRDLAGSLTAFGPVSPTLLRDHAGALSACLFLPSSLDALPLARFARDLHLALEGAEVGRMVSVVLKLGAHRLVLRAMDGVSGSVTMLVGVGRIDRPGLARIELDRAATRLGALVRS
Ga0209152_1009845523300026325SoilVRELAGSLTAFGPVAPTLLRDRAGTLSACLFLPSSLDALPLARFARDLQAALVGAEIGRVASVILKLGSRRVILRSMDGESGNVTMLVGVGRIDRPGLARIELDRAATRLGALVRS
Ga0209158_121202823300026333SoilRAANVPAAVRDLAGSLTAFGPVSPTLLRDHAGALSACLFLPSSLDALPLARFARDLHLALEGAEVGPVTSVILKLGAHRLVLRAMDGASGSVTMLVGVGRIDRPGLARIELDRAATRLDALVRS
Ga0209377_107222533300026334SoilGSLTAFGPVAPTVLRDTAGSLRACLFLPRSLEAMPLAQFARDLYAALEAAEIGQVSSVILRVGAHRLVVRAMDGVPGRAAMLVGGGPIDRPGLARIELDRAATRLGALVRG
Ga0209378_116091223300026528SoilELRAANVPAAVRELAGSLTAFGPVSPTLLCDHAGALSACLFLPSSLDALPIARFARDLHLALEGAEVGRMVSVVLKLGAHRLVLRAMDGVSGSVTMLVGVGRIDRPGLARIELDRAATRLGALVRS
Ga0209157_106640913300026537SoilLRATVVPSSVRDLAGSLTAFGPVAPTMMRDAGGSFRVCLFLPGSLEPLPLAQFARDLFGALEGAEIGRVGSVILRLGTHRLISRIVESVSGHATILVVGGPIARPGLARIELDRAATQLGALGRG
Ga0209157_114039933300026537SoilLLRDHAGALSACLFLPSSLDALPLARFARDLHLALEGAEVGRMVSVVLKLGAHRLVLRAMDGASGSVTMLVGVGRIDRPGLARIELDRAATRLGALVRS
Ga0209156_1017293613300026547SoilLRAATVPTAVRELAGSLTAFGPVAPTLLRDRAGTLSACLFLPSSLDALPLARFARDLQAALVGAEIGRVASVILKLGSRRVILRSMDGESGNVTMLVGVGRIDRPGLARIELDRAATRLGALVRS
Ga0209854_100130753300027384Groundwater SandTAFGPVAPTVLRDPAGALRACLFLPRTLEALPLARFARDLYAALEGSELGEVSSVTLRVGAQRVVLRAMDGASGEATMLVGAGPVDRPGLARIELDRAATRLGALVRS
Ga0209843_101049743300027511Groundwater SandLAGSLTAFGPVAPTVLRDTAGSLRACLFLPRSLEAMPLAQFVRDLYAALEEAEIGQVSSVILRVGAHRLLVRAMDGVPGRAAMLVGGGPIDRPGLARIELDRAATRLGALVRG
Ga0209887_102630213300027561Groundwater SandGPVAPTVLRDTAGSLRACLFLPRSLEAMPLAQFARDLYAALEEAEIGQVSSVILRVGAHRLLVRAMDGVPGRAAMLVGGGPIDRPGLARIELDRAATRLGALVRG
Ga0209874_106302023300027577Groundwater SandVPPSVRELAGSLTAFGPVAPTVLRDPAGALRACLFLPRTLEALPLARFARDLYAALEGSELGEVSSVTLRVGAQRVVLRAMDGASGEATMLVGAGPVDRPGLARIELDRAATRLGALVRS
Ga0209180_1011324333300027846Vadose Zone SoilSPVGDPAEEMELRATSVPQSVRELAGSLTAFGPVAPTVLRDTAGSLRACLFLPRSFEAMPLAQFARDLYAALEEAEIGQVSSVILRVGAHRLVVRAMDGVPGRRAAMLVGGGPIDRPGLARIELDRAATRLGALVRG
Ga0209180_1073914213300027846Vadose Zone SoilDLRATLVPPSVRAVADSLTAFGPVAPTMLRDATGSLRACLFLPSSVEAEPLAQFARDLHRALEGSEIGPVSSIILRLGTHRVILETLEVASGGVTLLVGGGPVDRPGLARLELGRAATRLGAVLRG
Ga0209701_1056983523300027862Vadose Zone SoilAAGGPRVIVQNGAHTLDGHREETALRATVVPSSVRELAGSLTAFGPVAPTVVCDAGGSFRVCLFLPGSLEALPLAEFARDLCGALEKAEIGRVASVILRLGTHRLILRSVESASGHATILVGGGPVARPGLARIELDRAATRLGAFGQG
Ga0209465_1010142423300027874Tropical Forest SoilVAPTVLRDRSGLLSACLFLPSSLDALPLAGFARDLHAALEGAEIGRVASVVLKLGGDRIVLRAMDGAPGNVTMLVGVGRIERPGLARIELDRAASRLGALVRG
Ga0209488_1009562913300027903Vadose Zone SoilTVLRDTAGSLRACLFLPRSFEAMPLAQFARDLYGALEEAEIGQVSSVILRVGAHRLVVRAMDGVPGRRAAMLVGGGPIDRPGLARIELDRAATRLGALVRG
Ga0209382_1224774523300027909Populus RhizosphereAPTLLRDHAGELSACLFLPSSLDALPLARFARDLHLALEDAEVGWMASVILKLGVHRLVLRTIDGVSGSVTILVGVGRIERPGLARIELDRAASRLGALVRS
Ga0209868_100977013300027947Groundwater SandSVGDPAEEMELRATSVPQSVRDLAGSLTAFGPVAPTVLRDTAGSLRACLFLPRSLEAMPLAQFARDLYAALEEAEIGQVSSVILRVGAHRLVVRAMDGVPGRAAMLVGGGPIDRPGLARIELDRAATRLGALVRG
Ga0209853_117832113300027961Groundwater SandSFSELAGSVTAFGPVAPTVLRDTAGSLRACLFLPRSLAAVPLAEYAWDLYGALDGTEIGEVSSVVLRVGAHCLVLRAVDGASGGGAVLVGGGPTDRPGLARIELDRAVTRLGALVRG
Ga0257175_103661823300028673SoilPVGDPAEEMELRATSVPQSVRELAGSLTAFGPVAPTVLRDTAGSLRACLFLPRSLEAIPLAQFARDLYAALEEAEIGQVSSVILRVGAHRLVVRAMDGVLGRAAMLVGGGPIDRPGLARIELDRAATRLGALVRG
Ga0307504_1002679333300028792SoilLTAFGPVSPTLLCDHAGALSACLFLPSSLDALPIARFARDLHLALEGAEVGRVASVILKLGAHRLVFRVTDGASGSVTMLVGAGRIDRPGLARIELDRAATRLGALVRS
Ga0307504_1038984813300028792SoilAIVPPGVRELADSLTAFGTVAPTLLRDRAGTLSACLFLPTSLDAVPLARFARDLHAALEGTEIGRIASVILKLGSHRVVLRAMDGVSGTVTMLVGGGRIDRPGLARIELDRAATRLGALVGG
(restricted) Ga0255311_104111013300031150Sandy SoilSPTLLCDHAGALSACLFLPSSLDALPIARFARDLHLALEGAEVGRVASVILKLGAHRLVFRVTDGASGSVTMLVGAGRIDRPGLARIELDRAATRLGALVRS
Ga0310888_1014172633300031538SoilGATNGRHSGYSSDPGSGIELRATSVPAAVREVAGSLTAFGPVAPTLLRDHAGALSACLFLPRSLDALPLARFARDLHLALDGAEIGAITSVILKLGTHRLVLRALSGASGHVTMLMGVGRVDRPGLARIELDRAASQLGALMGA
Ga0310887_1095445413300031547SoilLADSLTAFGTVVPTLLRDRAGALSACLFLPTSLDAVPLARFARDLHATLEGTEIGRIASVILKLGGHRVVLRAIDGVSGNVTMLVGGGRIDRPGLARIELDRAATRLGALVGG
Ga0318528_1020190433300031561SoilVRDLAGSLTAFGSVAPTVLRDRAGLLSACLFLPSSFDALPLAGFARDLHAALEGAEIGPVASVILKLGSDRIVLRAMDGAPGNVTMLVGVGRIERPGLARIELDRAASRLDALVRG
Ga0318555_1002361813300031640SoilADIELRTTAVPTAVRELAGALTAFGPVAPTLLRDRAGLLSACLFLPSSLDALPLAQFARDLYGALGGAEIGRVASVILKLGARRVILRSMDGESGNVTMLVGVGRIDRPGLARIELDRAATRLAALVGS
Ga0318572_1072743223300031681SoilHPASVPPAVHELAGSLTAFGSVAPTVLRDRAGLLGACLFLPSSLDAPPLAGFACDLHAALEGAEIGRVASVILKLGGDRIVLRAMDGAPGNVTMLVGVGRIERPGLARIELDRAASRLDALVRG
Ga0318560_1014773033300031682SoilAQSETGRGRRSGPEADSNADIELRTTAVPTAVRELAGALTAFGPVAPTLLRDRAGLLSACLFLPSSLDALPLAQFARDLYGALGGAEIGRVASVILKLGARRVILRSMDGESGNVTMLVGVGRIDRPGLARIELDRAATRLAALVGS
Ga0307469_1182367423300031720Hardwood Forest SoilFGPVAPTVLRDTAGSLRACLFLPRSLEAMPLAQFARDLYAVLEEAEIGQVSSVILRVGAHRLVVRAMDGVPGRAAMLVGGGPIDRPGLARIELDRAATRLGALVRG
Ga0307468_10022637513300031740Hardwood Forest SoilNDPGAGPELRAATVPPGVRDLADSLTAFGTVAPTLLRDRAGALSACLFLPTSLDAVPLASFARDLHGALEGTEIGRIASVILKLGSHRVVLRAMDGVSGTVTMLVGGGRIDRPGLARIELDRAATRLGALVGG
Ga0318535_1007254833300031764SoilGRRSGPEADSNADIELRTTAVPTAVRELAGALTAFGPVAPTLLRDRAGLLSACLFLPSSLDALPLAQFARDLYGALGGAEIGRVASVILKLGARRVILRSMDGESGNVTMLVGVGRIDRPGLARIELDRAATRLAALVGS
Ga0318509_1010721833300031768SoilTGRGRRSGPEADSNADIELRTTAVPTAVRELAGALTAFGPVAPTLLRDRAGLLSACLFLPSSLDALPLAQFARDLYGALGGAEIGRVASVILKLGARRVILRSMDGESGNVTMLVGVGRIDRPGLARIELDRAATRLAALVGS
Ga0318546_1000832293300031771SoilRMAAREAQSETGRGRRSGPEADSNADIELRTTAVPTAVRELAGALTAFGPVAPTLLRDRAGLLSACLFLPSSLDALPLAQFARDLYGALGGAEIGRVASVILKLGARRVILRSMDGESGNVTMLVGVGRIDRPGLARIELDRAATRLAALVGS
Ga0318543_1040673013300031777SoilLHPASVPPAVHELAGSLTAFGSVAPTVLRDRAGLLGACLFLPSSLDAPPLAGFACDLHAALEGAEIGRVASVILKLGGDRIVLRAMDGAPGNVTMLVGVGRIERPGLARLELDRAASRLGALVRG
Ga0318566_1035828523300031779SoilSGPEADSNADIELRTTAVPTAVRELAGALTAFGPVAPTLLRDRAGLLSACLFLPSSLDALPLAQFARDLYGALGGAEIGRVASVILKLGARRVILRSMDGESGNVTMLVGVGRIDRPGLARIELDRAATRLAALVGS
Ga0318547_1006870143300031781SoilQSETGRGTRSGPEADSNADIELRTTAVPTAVRELAGALTAFGPVAPTLLRDRAGLLSACLFLPSSLDALPLAQFARDLYGALGGAEIGRVASVILKLGARRVILRSMDGESGNVTMLVGVGRIDRPGLARIELDRAATRLAALVGS
Ga0318576_1047750623300031796SoilSETGRGTRSGPEADSNADIELRTTAVPTAVRELAGALTAFGPVAPTLLRDRAGLLSACLFLPSSLDALPLAQFARDLYGALGGAEIGRVASVILKLGARRVILRSMDGESGNVTMLVGVGRIDRPGLARIELDRAATRLAALVGS
Ga0318550_1012718413300031797SoilNHSGAEAELHPASVPPAVRDLAGSLTAFGSVAPTVLRDRAGLLSACLFLPSSFDALPLAGFARDLHAALEGAEIGPVASVILKLGSDRIVLRAMDGAPGNVTMLVGVGRIERPGLARIELDRAASRLDALVRG
Ga0318499_1026862713300031832SoilGMRDGFQNHSGAEAELHPASVPPAVRDLAGSLTAFGSVAPTVLRDRAGLLSACLFLPSSFDALPLAGFARDLHAALEGAEIGPVASVILKLGSDRIELDRAASRLDALVRG
Ga0318512_1029314423300031846SoilRDPDGGMRDGFQNHSGAEAELHPASVPPAVRDLAGSLTAFGSVAPTVLRDRAGLLSACLFLPSSFDALPLAGFARDLHAALEGAEIGPVASVILKLGSDRIVLRAMDGAPGNVTMLVGVGRIERPGLARIELDRAASRLDALVRG
Ga0318536_1067469413300031893SoilPEADSNADIELRTTAVPTAVRELAGALTAFGPVAPTLLRDRAGLLSACLFLPSSLDALPLAQFARDLYGALGGAEIGRVASVILKLGARRVILRSMDGESGNVTMLVGVGRIDRPGLARIELDRAATRLAALVGS
Ga0306923_1127386213300031910SoilFGSVAPTVLRDRAGLLSACLFLPSSFDALPLAGFARDLHATLEGAEIGPVASVILKLGSDRIVLRAMGGAPGNVTMLVGVGRIERPGLARIELDRAASRLDALVRG
Ga0310916_1051491533300031942SoilTVLRDRAGLLSACLFLPSSFDALPLAGFARDLHAALEGAEIGPVASVILKLGSDRIVLRAMDGAPGNVTMLVGVGRIERPGLARIELDRAASRLDALVRG
Ga0310885_1028404313300031943SoilATVPPGVRELADSLTAFGTVAPTLLRDRAGALSACLFLPTSLDAVPLARFARDLHATLEGTEIGRIASVILKLGGHRVVLRAIDGVSGNVTMLVGGGRIDRPGLARIELDRAATRLGALVGG
Ga0310884_1045259913300031944SoilTSVPAAVREVAGSLTAFGPVAPTLLRDHAGALSACLFLPRSLDALPLARFARDLHLALDGAEIGAITSVILKLGTHRLVLRALSGASGHVTMLMGVGRVDRPGLARIELDRAASRLGALMGA
Ga0318530_1035376713300031959SoilRELAGALTAFGPVAPTLLRDRAGLLSACLFLPSSLDALPLAQFARDLYGALGGAEIGRVASVILKLGARRVILRSMDGESGNVTMLVGVGRIDRPGLARIELDRAATRLAALVGS
Ga0318531_1030163513300031981SoilAPTVLRDRAGLLSACLFLPSSFDALPLAGFARDLHAALEGAEIGPVASVILKLGSDRIVLRAMDGAPGNVTMLVGVGRIERPGLARIELDRAASRLDALVRG
Ga0310903_1008410913300032000SoilRGTTNGRHSGPSSDPGSGIELRATSVPAAVREVAGSLTAFGPVAPTLLRDHAGALSACLFLPRSLDALPLARFARDLHLALDGAEIGAITSVILKLGTHRLVLRALSGASGHVTMLMGVGRVDRPGLARIELDRAASQLGALMGA
Ga0310902_1031040423300032012SoilSVPAAVREVAGSLTAFGPVAPTLLRDHAGALSACLFLPRSLDALPLARFARDLHLALDGAEIGAITSVILKLGTHRLVLRALSGASGHVTMLMGVGRVDRPGLARIELDRAASQLGALMG
Ga0310906_1016290633300032013SoilAGNGKHRGPENDSGAGPELRAATVPPGVRELADSLTAFGTVVPTLLRDRAGALSACLFLPTSLDAVPLARFARDLHATLEGTEIGRIASVILKLGGHRVVLRAIDGVSGNVTMLVGGGRIDRPGLARIELDRAATRLGALVGG
Ga0318504_1034519713300032063SoilPTVLRDRAGLLSACLFLPSSFDALPLAGFARDLHAALEGAEIGPVASVILKLGSDRIVLRAMDGAPGNVTMLVGVGRIERPGLARIELDRAASRLDALVRG
Ga0318524_1010168433300032067SoilRSGPEADSNADIELRTTAVPTAVRELAGALTAFGPVAPTLLRDRAGLLSACLFLPSSLDALPLAQFARDLYGALGGAEIGRVASVILKLGARRVILRSMDGESGNVTMLVGVGRIDRPGLARIELDRAATRLAALVGS
Ga0310890_1103298123300032075SoilSLTAFGPVAPTLLRDHAGALSACLFLPRSLDALPLARFARDLHLALDGAEIGAITSVILKLGTHRLVLRALSGASGHVTMLMGVGRVDRPGLARIELDRAASQLGALMGA
Ga0318518_1032087013300032090SoilLTAFGSVAPTVLRDRAGLLSACLFLPSSFDGLPLAGFARDLHAALEGAEIGPVASVILKLGSDRIVLRAMDGAPGNVTMLVGVGRIERPGLARIELDRAASRLGALV
Ga0318540_1040937413300032094SoilPKAVSAPTLLRDRAGLLSACLFLPSSLDALPLAQFARDLYGALGGAEIGRVASVILKLGARRVILRSMDGESGNVTMLVGVGRIDRPGLARIELDRAATRLAALVGS
Ga0307471_10043801033300032180Hardwood Forest SoilTAVREAQLGTSNGKHAEPRSELGTRIELRAANVPAAVRELAGSLTAFGPVSPTLLCDHAGALSACLFLPSSLDALPLARFARDLHLALEGAEVGRMVSVVLKLGAHRLVLRAMDGVSGSVTMLVGVGRIDRPGLARIELDRAATRLGALVRS
Ga0307471_10272174523300032180Hardwood Forest SoilDSSAGIELREASVPTAVRELAGSLTAFGPVAPTLLRDRAGALSACLFLPSSLEALPLARFARDLHAALGGAEIGRVASIILKLGARRVVLRTMDGRSGAVTMLVGGGPIDRPGLARIELDRAATRLGTLVGG
Ga0310896_1044884623300032211SoilNDSGAGPELRAATVPPGVRELADSLTAFGTVVPTLLRDRAGALSACLFLPTSLDAVPLARFARDLHATLEGTEIGRIASVILKLGGHRVVLRAIDGVSGNVTMLVGGGRIDRPGLARIELDRAATRLGALVGG
Ga0335085_1094763313300032770SoilAGNGAGAERELRATSVPPAVHELAGSLTAFGSVAATMLRDRDGALSACLFLPRSLDAMPLARFAHDLFEVLEGAEIGPVTSVILKLGSHRVVLRAMNGAAGHVTMLVGGGRIDRPGLARIELDRAASRLGALVEG

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Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
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