Metagenome Family F062889

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F062889
Family Type	Metagenome
Number of Sequences	130
Average Sequence Length	67 residues
Representative Sequence	MATDPKKSLTPSSTSSVAKTDVDRLLQTGLADFSLRELLGLLISSAGAAERNVYLQDTPT
Number of Associated Samples	112
Number of Associated Scaffolds	130

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	97.69 %
% of genes near scaffold ends (potentially truncated)	95.38 %
% of genes from short scaffolds (< 2000 bps)	97.69 %
Associated GOLD sequencing projects	107
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.45

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (53.077 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (11.539 % of family members)
Environment Ontology (ENVO)	Unclassified (27.692 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (46.154 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 45.45% β-sheet: 0.00% Coil/Unstructured: 54.55%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.45
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.45
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 130 Family Scaffolds
PF00078	RVT_1	2.31
PF00872	Transposase_mut	2.31
PF13408	Zn_ribbon_recom	0.77
PF00072	Response_reg	0.77
PF02371	Transposase_20	0.77
PF02899	Phage_int_SAM_1	0.77
PF13517	FG-GAP_3	0.77
PF02518	HATPase_c	0.77

COG ID	Name	Functional Category	% Frequency in 130 Family Scaffolds
COG3328	Transposase (or an inactivated derivative)	Mobilome: prophages, transposons [X]	2.31
COG3547	Transposase	Mobilome: prophages, transposons [X]	0.77
COG4973	Site-specific recombinase XerC	Replication, recombination and repair [L]	0.77
COG4974	Site-specific recombinase XerD	Replication, recombination and repair [L]	0.77

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.08 %
All Organisms	root	All Organisms	46.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.08 %
cellular organisms	root	All Organisms → cellular organisms	46.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.08 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	40.00 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	6.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.08 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	20.00 %
unclassified Archaea	no rank	All Organisms → cellular organisms → Archaea → unclassified Archaea	6.92 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	4.62 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	2.31 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	1.54 %
Nitrospinae/Tectomicrobia group	clade	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group	0.77 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.08 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	18.46 %
archaeon 13_1_20CM_2_51_12	species	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon 13_1_20CM_2_51_12	6.92 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	3.85 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1.54 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1.54 %
Nitrospinae	phylum	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Nitrospinae	0.77 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.77 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.77 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.08 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	18.46 %
archaeon 13_1_20CM_2_51_12	species	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon 13_1_20CM_2_51_12	6.92 %
Clostridia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia	3.85 %
unclassified Verrucomicrobia	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia	1.54 %
Cellvibrionales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Cellvibrionales	0.77 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.77 %
Vibrionales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Vibrionales	0.77 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.77 %
unclassified Nitrospinota	no rank	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Nitrospinae → unclassified Nitrospinota	0.77 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.08 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	18.46 %
archaeon 13_1_20CM_2_51_12	species	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon 13_1_20CM_2_51_12	6.92 %
Thermoanaerobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Thermoanaerobacterales	3.85 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1.54 %
Cellvibrionaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Cellvibrionales → Cellvibrionaceae	0.77 %
Nitrospinae bacterium CG11_big_fil_rev_8_21_14_0_20_56_8	species	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Nitrospinae → unclassified Nitrospinota → Nitrospinae bacterium CG11_big_fil_rev_8_21_14_0_20_56_8	0.77 %
Vibrionaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Vibrionales → Vibrionaceae	0.77 %
Corynebacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	0.77 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	0.77 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.08 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	18.46 %
archaeon 13_1_20CM_2_51_12	species	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon 13_1_20CM_2_51_12	6.92 %
Thermoanaerobacterales Family III. Incertae Sedis	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Thermoanaerobacterales → Thermoanaerobacterales Family III. Incertae Sedis	3.08 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1.54 %
Marinibactrum	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Cellvibrionales → Cellvibrionaceae → Marinibactrum	0.77 %
Burkholderia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Burkholderia	0.77 %
Thermoanaerobacteraceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Thermoanaerobacterales → Thermoanaerobacteraceae	0.77 %
Mycobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae	0.77 %
Nitrospinae bacterium CG11_big_fil_rev_8_21_14_0_20_56_8	species	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Nitrospinae → unclassified Nitrospinota → Nitrospinae bacterium CG11_big_fil_rev_8_21_14_0_20_56_8	0.77 %
Vibrionaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Vibrionales → Vibrionaceae	0.77 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.08 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	18.46 %
archaeon 13_1_20CM_2_51_12	species	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon 13_1_20CM_2_51_12	6.92 %
Caldicellulosiruptor	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Thermoanaerobacterales → Thermoanaerobacterales Family III. Incertae Sedis → Caldicellulosiruptor	3.08 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1.54 %
Marinibactrum halimedae	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Cellvibrionales → Cellvibrionaceae → Marinibactrum → Marinibactrum halimedae	0.77 %
Thermoanaerobacter	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Thermoanaerobacterales → Thermoanaerobacteraceae → Thermoanaerobacter	0.77 %
Mycobacteroides	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacteroides	0.77 %
Burkholderia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Burkholderia	0.77 %
Nitrospinae bacterium CG11_big_fil_rev_8_21_14_0_20_56_8	species	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Nitrospinae → unclassified Nitrospinota → Nitrospinae bacterium CG11_big_fil_rev_8_21_14_0_20_56_8	0.77 %
Vibrionaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Vibrionales → Vibrionaceae	0.77 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.08 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	18.46 %
archaeon 13_1_20CM_2_51_12	species	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon 13_1_20CM_2_51_12	6.92 %
Caldicellulosiruptor acetigenus	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Thermoanaerobacterales → Thermoanaerobacterales Family III. Incertae Sedis → Caldicellulosiruptor → Caldicellulosiruptor acetigenus	2.31 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1.54 %
Thermoanaerobacter wiegelii	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Thermoanaerobacterales → Thermoanaerobacteraceae → Thermoanaerobacter → Thermoanaerobacter wiegelii	0.77 %
Caldicellulosiruptor bescii	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Thermoanaerobacterales → Thermoanaerobacterales Family III. Incertae Sedis → Caldicellulosiruptor → Caldicellulosiruptor bescii	0.77 %
Marinibactrum halimedae	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Cellvibrionales → Cellvibrionaceae → Marinibactrum → Marinibactrum halimedae	0.77 %
Mycobacteroides	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacteroides	0.77 %
Burkholderia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Burkholderia	0.77 %
Nitrospinae bacterium CG11_big_fil_rev_8_21_14_0_20_56_8	species	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Nitrospinae → unclassified Nitrospinota → Nitrospinae bacterium CG11_big_fil_rev_8_21_14_0_20_56_8	0.77 %
Vibrionaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Vibrionales → Vibrionaceae	0.77 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000550\|F24TB_13709643	Not Available	503	Open in IMG/M
3300001686\|C688J18823_11006025	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Thermoanaerobacterales → Thermoanaerobacterales Family III. Incertae Sedis → Caldicellulosiruptor → Caldicellulosiruptor bescii	529	Open in IMG/M
3300004267\|Ga0066396_10095067	Not Available	544	Open in IMG/M
3300004479\|Ga0062595_102094917	Not Available	550	Open in IMG/M
3300004479\|Ga0062595_102417930	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	521	Open in IMG/M
3300004633\|Ga0066395_10843907	Not Available	552	Open in IMG/M
3300005172\|Ga0066683_10355303	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	909	Open in IMG/M
3300005186\|Ga0066676_11131421	Not Available	515	Open in IMG/M
3300005330\|Ga0070690_101503956	Not Available	544	Open in IMG/M
3300005332\|Ga0066388_103137624	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacteroides	844	Open in IMG/M
3300005332\|Ga0066388_103913601	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	760	Open in IMG/M
3300005332\|Ga0066388_107126209	Not Available	562	Open in IMG/M
3300005337\|Ga0070682_101719386	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Thermoanaerobacterales → Thermoanaerobacteraceae → Thermoanaerobacter → Thermoanaerobacter wiegelii	545	Open in IMG/M
3300005344\|Ga0070661_101680321	Not Available	538	Open in IMG/M
3300005365\|Ga0070688_101533626	Not Available	543	Open in IMG/M
3300005366\|Ga0070659_102112631	Not Available	506	Open in IMG/M
3300005446\|Ga0066686_10972733	Not Available	553	Open in IMG/M
3300005446\|Ga0066686_11038441	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Thermoanaerobacterales → Thermoanaerobacterales Family III. Incertae Sedis → Caldicellulosiruptor → Caldicellulosiruptor acetigenus	530	Open in IMG/M
3300005450\|Ga0066682_10689356	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	629	Open in IMG/M
3300005543\|Ga0070672_102158311	Not Available	502	Open in IMG/M
3300005549\|Ga0070704_101706866	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon 13_1_20CM_2_51_12	582	Open in IMG/M
3300005576\|Ga0066708_10566078	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon 13_1_20CM_2_51_12	731	Open in IMG/M
3300005617\|Ga0068859_102030166	Not Available	635	Open in IMG/M
3300005713\|Ga0066905_101180269	All Organisms → cellular organisms → Bacteria	683	Open in IMG/M
3300005713\|Ga0066905_101289127	Not Available	657	Open in IMG/M
3300005713\|Ga0066905_102280594	Not Available	506	Open in IMG/M
3300005764\|Ga0066903_107210033	Not Available	575	Open in IMG/M
3300005764\|Ga0066903_108443766	Not Available	525	Open in IMG/M
3300005834\|Ga0068851_10889259	Not Available	557	Open in IMG/M
3300005836\|Ga0074470_10612676	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	687	Open in IMG/M
3300005840\|Ga0068870_10889886	Not Available	628	Open in IMG/M
3300006196\|Ga0075422_10460896	Not Available	571	Open in IMG/M
3300006794\|Ga0066658_10761597	Not Available	541	Open in IMG/M
3300006846\|Ga0075430_101537579	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Thermoanaerobacterales → Thermoanaerobacterales Family III. Incertae Sedis → Caldicellulosiruptor → Caldicellulosiruptor acetigenus	547	Open in IMG/M
3300006852\|Ga0075433_11213096	Not Available	655	Open in IMG/M
3300006871\|Ga0075434_100494641	All Organisms → cellular organisms → Bacteria	1244	Open in IMG/M
3300006894\|Ga0079215_10263998	All Organisms → cellular organisms → Bacteria	923	Open in IMG/M
3300006914\|Ga0075436_101525050	Not Available	508	Open in IMG/M
3300007004\|Ga0079218_13571690	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon 13_1_20CM_2_51_12	528	Open in IMG/M
3300007076\|Ga0075435_101179473	All Organisms → cellular organisms → Bacteria	670	Open in IMG/M
3300007076\|Ga0075435_101713073	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Thermoanaerobacterales → Thermoanaerobacterales Family III. Incertae Sedis → Caldicellulosiruptor → Caldicellulosiruptor acetigenus	551	Open in IMG/M
3300009012\|Ga0066710_103216054	All Organisms → cellular organisms → Bacteria	627	Open in IMG/M
3300009088\|Ga0099830_11042263	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	678	Open in IMG/M
3300009098\|Ga0105245_10745491	All Organisms → cellular organisms → Bacteria	1015	Open in IMG/M
3300009143\|Ga0099792_10804540	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	616	Open in IMG/M
3300009147\|Ga0114129_10440453	All Organisms → cellular organisms → Bacteria	1710	Open in IMG/M
3300009156\|Ga0111538_13305640	Not Available	561	Open in IMG/M
3300009813\|Ga0105057_1107875	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	521	Open in IMG/M
3300010358\|Ga0126370_11656761	Not Available	614	Open in IMG/M
3300010360\|Ga0126372_13070215	Not Available	518	Open in IMG/M
3300010361\|Ga0126378_10827310	All Organisms → cellular organisms → Bacteria	1035	Open in IMG/M
3300010362\|Ga0126377_12193948	Not Available	628	Open in IMG/M
3300010366\|Ga0126379_12434370	Not Available	623	Open in IMG/M
3300010366\|Ga0126379_13121080	Not Available	555	Open in IMG/M
3300010366\|Ga0126379_13220090	Not Available	547	Open in IMG/M
3300010376\|Ga0126381_102810707	Not Available	695	Open in IMG/M
3300010376\|Ga0126381_103944572	Not Available	578	Open in IMG/M
3300010397\|Ga0134124_11812099	Not Available	644	Open in IMG/M
3300010403\|Ga0134123_12451073	Not Available	587	Open in IMG/M
3300011119\|Ga0105246_11263601	Not Available	682	Open in IMG/M
3300011417\|Ga0137326_1148167	Not Available	542	Open in IMG/M
3300012349\|Ga0137387_10649068	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	764	Open in IMG/M
3300012349\|Ga0137387_10982104	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	607	Open in IMG/M
3300012349\|Ga0137387_11050038	Not Available	582	Open in IMG/M
3300012351\|Ga0137386_10066386	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Burkholderia	2513	Open in IMG/M
3300012354\|Ga0137366_10303972	Not Available	1173	Open in IMG/M
3300012358\|Ga0137368_10912718	Not Available	534	Open in IMG/M
3300012359\|Ga0137385_11496563	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	539	Open in IMG/M
3300012363\|Ga0137390_11177004	All Organisms → cellular organisms → Bacteria → Acidobacteria	714	Open in IMG/M
3300012511\|Ga0157332_1018796	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	783	Open in IMG/M
3300012685\|Ga0137397_10763924	All Organisms → cellular organisms → Bacteria	717	Open in IMG/M
3300012917\|Ga0137395_10900216	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon 13_1_20CM_2_51_12	640	Open in IMG/M
3300012918\|Ga0137396_10480210	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Nitrospinae → unclassified Nitrospinota → Nitrospinae bacterium CG11_big_fil_rev_8_21_14_0_20_56_8	921	Open in IMG/M
3300012948\|Ga0126375_10610605	Not Available	834	Open in IMG/M
3300012948\|Ga0126375_11652728	Not Available	554	Open in IMG/M
3300013297\|Ga0157378_11376590	Not Available	748	Open in IMG/M
3300014262\|Ga0075301_1118967	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon 13_1_20CM_2_51_12	589	Open in IMG/M
3300014308\|Ga0075354_1070788	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon 13_1_20CM_2_51_12	680	Open in IMG/M
3300014501\|Ga0182024_12558591	Not Available	549	Open in IMG/M
3300014969\|Ga0157376_11146599	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	804	Open in IMG/M
3300015371\|Ga0132258_11742965	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1570	Open in IMG/M
3300015371\|Ga0132258_12391950	All Organisms → cellular organisms → Bacteria	1323	Open in IMG/M
3300015372\|Ga0132256_102254185	Not Available	649	Open in IMG/M
3300015372\|Ga0132256_103111361	Not Available	558	Open in IMG/M
3300015373\|Ga0132257_102200908	Not Available	713	Open in IMG/M
3300015373\|Ga0132257_103508031	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	571	Open in IMG/M
3300015374\|Ga0132255_103928594	Not Available	631	Open in IMG/M
3300016270\|Ga0182036_11252745	Not Available	618	Open in IMG/M
3300016357\|Ga0182032_10410574	Not Available	1097	Open in IMG/M
3300016404\|Ga0182037_10047630	All Organisms → cellular organisms → Bacteria	2845	Open in IMG/M
3300016445\|Ga0182038_10907987	Not Available	776	Open in IMG/M
3300017959\|Ga0187779_11042579	Not Available	569	Open in IMG/M
3300017966\|Ga0187776_11040319	Not Available	604	Open in IMG/M
3300018027\|Ga0184605_10372818	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	643	Open in IMG/M
3300018429\|Ga0190272_10688894	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon 13_1_20CM_2_51_12	917	Open in IMG/M
3300018482\|Ga0066669_10868713	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	804	Open in IMG/M
3300018482\|Ga0066669_12288656	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon 13_1_20CM_2_51_12	515	Open in IMG/M
3300019360\|Ga0187894_10150229	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1185	Open in IMG/M
3300019361\|Ga0173482_10329585	Not Available	683	Open in IMG/M
3300019999\|Ga0193718_1110037	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	555	Open in IMG/M
3300021086\|Ga0179596_10614729	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon 13_1_20CM_2_51_12	551	Open in IMG/M
3300021432\|Ga0210384_11617696	Not Available	553	Open in IMG/M
3300022518\|Ga0224548_1038262	Not Available	529	Open in IMG/M
3300024219\|Ga0247665_1054697	Not Available	560	Open in IMG/M
3300025588\|Ga0208586_1132096	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	525	Open in IMG/M
3300025908\|Ga0207643_10423261	Not Available	844	Open in IMG/M
3300025920\|Ga0207649_10152034	All Organisms → cellular organisms → Bacteria	1595	Open in IMG/M
3300025930\|Ga0207701_11275398	Not Available	603	Open in IMG/M
3300025965\|Ga0210090_1040542	All Organisms → cellular organisms → Bacteria	637	Open in IMG/M
3300026035\|Ga0207703_11310395	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Vibrionales → Vibrionaceae	696	Open in IMG/M
3300026548\|Ga0209161_10529817	Not Available	523	Open in IMG/M
3300027330\|Ga0207777_1087475	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	540	Open in IMG/M
3300027573\|Ga0208454_1133664	Not Available	580	Open in IMG/M
3300027646\|Ga0209466_1034913	Not Available	1028	Open in IMG/M
3300027684\|Ga0209626_1213292	Not Available	511	Open in IMG/M
3300027874\|Ga0209465_10059957	Not Available	1833	Open in IMG/M
3300027882\|Ga0209590_11069776	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	500	Open in IMG/M
3300027889\|Ga0209380_10867681	Not Available	508	Open in IMG/M
3300027907\|Ga0207428_10658314	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	751	Open in IMG/M
3300028878\|Ga0307278_10496362	Not Available	533	Open in IMG/M
3300031231\|Ga0170824_110571742	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	622	Open in IMG/M
3300031469\|Ga0170819_12411143	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	530	Open in IMG/M
3300031708\|Ga0310686_115114308	All Organisms → cellular organisms → Bacteria	3877	Open in IMG/M
3300031720\|Ga0307469_12296023	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	526	Open in IMG/M
3300031820\|Ga0307473_10487797	Not Available	829	Open in IMG/M
3300031854\|Ga0310904_10491006	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Cellvibrionales → Cellvibrionaceae → Marinibactrum → Marinibactrum halimedae	822	Open in IMG/M
3300031901\|Ga0307406_12049715	Not Available	512	Open in IMG/M
3300031913\|Ga0310891_10265017	All Organisms → cellular organisms → Bacteria → Acidobacteria	597	Open in IMG/M
3300031954\|Ga0306926_12780006	Not Available	529	Open in IMG/M
3300032174\|Ga0307470_10747454	Not Available	751	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	76.15%
Host-Associated	Host-Associated	23.85%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	72.31%
Plants	Host-Associated → Plants	23.85%
Aquatic	Environmental → Aquatic	3.85%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	70.77%
Rhizosphere	Host-Associated → Plants → Rhizosphere	16.15%
Rhizoplane	Host-Associated → Plants → Rhizoplane	7.69%
Sediment	Environmental → Aquatic → Sediment	3.08%
Marine	Environmental → Aquatic → Marine	0.77%
Peat	Environmental → Terrestrial → Peat	0.77%
Cave	Environmental → Terrestrial → Cave	0.77%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	50.00%
Loam	Environmental → Terrestrial → Soil → Loam	16.15%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	11.54%
Soil	Host-Associated → Plants → Rhizosphere → Soil	4.62%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	3.85%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	3.85%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	3.85%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	3.08%
Wetlands	Environmental → Aquatic → Marine → Wetlands	0.77%
Sand	Environmental → Terrestrial → Soil → Sand	0.77%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	0.77%
Unclassified	Environmental → Terrestrial → Cave → Unclassified	0.77%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	26.15%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	11.54%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	11.54%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	9.23%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	9.23%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	4.62%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	3.85%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	3.85%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	3.08%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	3.08%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	3.08%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	3.08%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	1.54%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	1.54%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	0.77%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	0.77%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	0.77%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	0.77%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	0.77%
Unclassified	Environmental → Terrestrial → Cave → Unclassified → Unclassified	0.77%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	11.54%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	10.00%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	8.46%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	7.69%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	6.15%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	4.62%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	3.85%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	3.85%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	2.31%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	2.31%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	2.31%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	1.54%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.54%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.54%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.54%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.54%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	1.54%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	1.54%
Natural And Restored Wetlands	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands	1.54%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	1.54%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	1.54%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	1.54%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.54%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	1.54%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.54%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.54%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	1.54%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	0.77%
Sediment (Intertidal)	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Sediment (Intertidal)	0.77%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.77%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	0.77%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Corn, Switchgrass And Miscanthus Rhizosphere	0.77%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost	0.77%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.77%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	0.77%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	0.77%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.77%
Groundwater Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand	0.77%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	0.77%
Microbial Mat On Rocks	Environmental → Terrestrial → Cave → Unclassified → Unclassified → Microbial Mat On Rocks	0.77%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.77%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.77%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.77%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000550	Amended soil microbial communities from Kansas Great Prairies, USA - BrdU amended with acetate total DNA F2.4 TB clc assemly	Environmental	Open in IMG/M
3300001686	Grasslands soil microbial communities from Hopland, California, USA	Environmental	Open in IMG/M
3300004267	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 6 MoBio	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005172	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132	Environmental	Open in IMG/M
3300005186	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125	Environmental	Open in IMG/M
3300005330	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005337	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG	Environmental	Open in IMG/M
3300005344	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG	Host-Associated	Open in IMG/M
3300005365	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG	Environmental	Open in IMG/M
3300005366	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG	Host-Associated	Open in IMG/M
3300005446	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135	Environmental	Open in IMG/M
3300005450	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131	Environmental	Open in IMG/M
3300005543	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG	Host-Associated	Open in IMG/M
3300005549	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG	Environmental	Open in IMG/M
3300005576	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157	Environmental	Open in IMG/M
3300005617	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2	Host-Associated	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005834	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2	Host-Associated	Open in IMG/M
3300005836	Microbial communities from Youngs Bay mouth sediment, Columbia River estuary, Oregon - S.42_YBB	Environmental	Open in IMG/M
3300005840	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2	Host-Associated	Open in IMG/M
3300006196	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1	Host-Associated	Open in IMG/M
3300006794	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107	Environmental	Open in IMG/M
3300006846	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4	Host-Associated	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006894	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Control	Environmental	Open in IMG/M
3300006914	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5	Host-Associated	Open in IMG/M
3300007004	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost	Environmental	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009813	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N3_10_20	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300011119	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG	Host-Associated	Open in IMG/M
3300011417	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT500_2	Environmental	Open in IMG/M
3300012349	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaG	Environmental	Open in IMG/M
3300012351	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaG	Environmental	Open in IMG/M
3300012354	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_60_16 metaG	Environmental	Open in IMG/M
3300012358	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_100_16 metaG	Environmental	Open in IMG/M
3300012359	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300012511	Unplanted soil (control) microbial communities from North Carolina - M.Soil.8.old.080610_10	Environmental	Open in IMG/M
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental	Open in IMG/M
3300012917	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG	Environmental	Open in IMG/M
3300012918	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300014262	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_TuleA_D1	Environmental	Open in IMG/M
3300014308	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_TuleC_D1	Environmental	Open in IMG/M
3300014501	Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300017959	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_10_MG	Environmental	Open in IMG/M
3300017966	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP12_20_MG	Environmental	Open in IMG/M
3300018027	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_coex	Environmental	Open in IMG/M
3300018429	Populus adjacent soil microbial communities from riparian zone of Shoshone River, Wyoming, USA - 504 T	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300019360	White microbial mat communities from a lava cave in the Kipuka Kanohina Cave System on the Island of Hawaii, USA - GBC170108-1 metaG	Environmental	Open in IMG/M
3300019361	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S133-311R-2 (version 2)	Environmental	Open in IMG/M
3300019999	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2a1	Environmental	Open in IMG/M
3300021086	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300022518	Peat soil microbial communities from Stordalen Mire, Sweden - 717 P2 20-24	Environmental	Open in IMG/M
3300024219	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK06	Environmental	Open in IMG/M
3300025588	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 53-3 shallow-072012 (SPAdes)	Environmental	Open in IMG/M
3300025908	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025920	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025930	Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)	Environmental	Open in IMG/M
3300025965	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_ThreeSqA_D2 (SPAdes)	Environmental	Open in IMG/M
3300026035	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026548	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155 (SPAdes)	Environmental	Open in IMG/M
3300027330	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 35 (SPAdes)	Environmental	Open in IMG/M
3300027573	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT100 (SPAdes)	Environmental	Open in IMG/M
3300027646	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 30 MoBio (SPAdes)	Environmental	Open in IMG/M
3300027684	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM1H0_M2 (SPAdes)	Environmental	Open in IMG/M
3300027874	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes)	Environmental	Open in IMG/M
3300027882	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027889	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6 (SPAdes)	Environmental	Open in IMG/M
3300027907	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes)	Host-Associated	Open in IMG/M
3300028878	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_117	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031469	Fir Spring Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300031854	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D1	Environmental	Open in IMG/M
3300031901	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2	Host-Associated	Open in IMG/M
3300031913	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D4	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
F24TB_137096431	3300000550	Soil	MATDPKGNLAPAAVSELAKNDVDRLLQTRLADFSLRELLGLLISSAGTAEGN
C688J18823_110060251	3300001686	Soil	MATNPKKSLTPTGISGLAKTDIDRLLQTGLPDFTLRELLGALISSAGAAERQVYLDDTPSDKSNGFYDRSLQVGSI
Ga0066396_100950671	3300004267	Tropical Forest Soil	MATDPKKSLPSSSASTIAKTDIDRLLQTGLADFSLRELLGLLISSAGAAERN
Ga0062595_1020949171	3300004479	Soil	MATDPQKSLTPSSGSTITKTDVDRLLQTGLADFSLRELLGVLISSASVAERNVYLQDSPT
Ga0062595_1024179301	3300004479	Soil	MPADPNKSIAPAALSETAKNQVDQLLQTGLADFTLRELLGLLISSTGLAERQVYLEKTAA
Ga0066395_108439071	3300004633	Tropical Forest Soil	MATDPKKSVTPTAMSTVAKTDIERLLQMGLGDFSLRELLGMLVSSAGAAERNVYLQDTPT
Ga0066683_103553032	3300005172	Soil	MSADPKKSVTPTAISELAKNEVDHLLQAGLADLSLRELLGLLISSAGVAERNVYLEKIAADKPNGFYD
Ga0066676_111314211	3300005186	Soil	MATDPKKSVTPTVISAVAKTDIERLLQMGLGDFSLRELLGMLISSAGAAERNVYLEDTPTDKSNGFYDRSLQVGSIPVDVRVPRTR
Ga0070690_1015039561	3300005330	Switchgrass Rhizosphere	MATDPKKSLAPASMAEVVKNDVDRLLQTGLTDFTLRELLGLLISSAGAAERNVYLEDTPVDRPNGFYDRSLQVGSIPVDVRVPRTRNGDF
Ga0066388_1031376241	3300005332	Tropical Forest Soil	MATDPKKSVPPSSISSVAKTDVDRFLQTGLADFSLRELLGLLISSAGAAERNV
Ga0066388_1039136013	3300005332	Tropical Forest Soil	MTTDPKKSLTPASVSDVAKNDIDRLLQTGLADFSLRELLGLLISSTGAAERNIYL
Ga0066388_1071262092	3300005332	Tropical Forest Soil	MATDPKKTVSPSSISSIAKTDVDRLLQTGLADFSLRELLGLLISSAGAAE
Ga0070682_1017193861	3300005337	Corn Rhizosphere	MATDPKGNLAPAAVSELVKNDVDRLLQTGLADFSLRELLGLLISSAGTAERNVYLEKTGADKPNGFYERALQV
Ga0070661_1016803212	3300005344	Corn Rhizosphere	MATDPKKSLAPASMAEVVKNDVDRLLQTGLTDFTLRELLGLLISSAGAAERNVYLED
Ga0070688_1015336262	3300005365	Switchgrass Rhizosphere	MATDPKKSLAPASMAEVVKNDVDRLLQTGLTDFTLRELLGLLISSAGAAERNVYLEDTPVDRP
Ga0070659_1021126311	3300005366	Corn Rhizosphere	MATDPKKSVTPTTISNLAKTDVDRLLQTGLADFSLRELLGLLISSAGAAERNVYLQDTPNDRPNGFYDRSLQ
Ga0066686_109727332	3300005446	Soil	MATDPKKSLTPSAVSSSAKTDIDRLLQTGLADFSLRELLGLLISSAGAAERNVYLQDAPADKSNGFYDRSLQLGSIPVDI
Ga0066686_110384411	3300005446	Soil	MTTDPKKSLTPASISEVAKSDVDRLLETGLADFSLRELLGLLISSTGLAERNVFLEHTNTDKPNGFYDRSLQVGSVPVEIRVPRTR
Ga0066682_106893561	3300005450	Soil	MATDPKKSLPPVSIAELAKNDVDRLLQTGLADFSLRELLGLLVSSAGAAERNVYLEKTSNDKPNGFYDRSLEVGTIPID
Ga0070672_1021583111	3300005543	Miscanthus Rhizosphere	MATDPKKSVTPTTISNLAKTDVDRLLQTGLADFSLRELLGLLISSAGAAERNVYLQDTPNDRPNGFYDRS
Ga0070704_1017068661	3300005549	Corn, Switchgrass And Miscanthus Rhizosphere	MTTDPNKSLTPAALSELTKSDVNQLLQTGLGDFSLRELLGLLISTAGTAERSLYLEKEPTDKPNGFYDRSLPL
Ga0066708_105660782	3300005576	Soil	MTADPKKSLASVSLSEIAKSDVDQFLQTGLADFSLRELLGLVISSAGAAERSVYLEKEPTDKPNGFYDRS
Ga0068859_1020301662	3300005617	Switchgrass Rhizosphere	MATDPKKSLPPSVISSTAKTDIDRLLQTGLADFSLRELLGMLISSAGAAERNVYLQDTPTDKPNGFYDRSLQVGSIPVDIRV
Ga0066905_1011802692	3300005713	Tropical Forest Soil	MATDPKKSVTPSSVSSIAKTDIDRLLQTGLADFSLRELLGLLISSAGAAERNVYLQDTPSDRSNGFYDRALQVGSIP
Ga0066905_1012891272	3300005713	Tropical Forest Soil	MATDPKKSLPLSSASTVAKTDIDRLLQTGLADFSLRELLGLLISSVGAAERNVYLQDTPTDKSNGFYDRSLLVGSIPVDVR
Ga0066905_1022805942	3300005713	Tropical Forest Soil	MATDPKKSVTPSSISSVAKTDVDRLLQTGLADFSLRELLGLLISSAGAAER
Ga0066903_1072100331	3300005764	Tropical Forest Soil	MATDPKKSLPSSSVSTIAKTDIDRLLQTGLADFSLRELLGLLISSAGAAERNVYLQDTPADKSNGFYDRSLL
Ga0066903_1084437661	3300005764	Tropical Forest Soil	MATDPKKSVPPSSISSVAKTDVDRFLQTGLADFSLRELLGLLISSAGAAERNVY
Ga0068851_108892591	3300005834	Corn Rhizosphere	MATDPKKSLAPASMAEVVKNDVDRLLQTGLTDFTLRELLGLLISSAGAAERNVYLEDTPVDRPNGFY
Ga0074470_106126761	3300005836	Sediment (Intertidal)	MTTDPKKILTPASISDAAKNDMDRLLETGLADVSLRELLGLLVSSTGAAERNVYLENTPTDRPNGFYD
Ga0068870_108898861	3300005840	Miscanthus Rhizosphere	MATDPKGNLAPAAVSELVKNDVDRLLQTGLADFSLRELLGLLISSAGTAERNVYLEKTGADKPNGFYERALQVG
Ga0075422_104608962	3300006196	Populus Rhizosphere	MATDPKKTVPSSSISPVAKTDIDRFLQTGLADFSLRELLGLLISSAGAAERHVYLQETPNDKSNGFYD
Ga0066658_107615972	3300006794	Soil	MTTDPKKSLTPASIAELAKSDVDQLLQTGLADFSLRELLGLLISSAGAAERNVYLEKDPT
Ga0075430_1015375791	3300006846	Populus Rhizosphere	MATDPKKSLPPSSASTIAKTDIDRLLQTGLADFSLRELLGLLISSAGAAERNVYLQDTPADRSNGFYDRSLQIGSIPV
Ga0075433_112130961	3300006852	Populus Rhizosphere	MATDPKKSLPPSSISSVAKTDIDRLLQTGLADFSLRELLGLLITSAGTAERNIYLQDTPTDRPN
Ga0075434_1004946411	3300006871	Populus Rhizosphere	MTTDPKESLPSSSASTIAKTDIDRLLQTGLADFSLRELLGLLISSAGAAERNIYLQ
Ga0079215_102639982	3300006894	Agricultural Soil	MTTDPKKSLPSPINSEFVKNDVDRLLENGLADFSLRELLGALVSSAAAAERGVYLGKADTDKANGFYDRALEVGTIPVEVRVPR
Ga0075436_1015250501	3300006914	Populus Rhizosphere	MATDPKKSLPPSSASTIAKTDIDRLLQTGLADFSLRELLGLLISSAGAAERNVYLQDTPADRSNG
Ga0079218_135716901	3300007004	Agricultural Soil	MTADPKKSLAPASISELAKSDVDQLLQTGLADYSLRDLLGLLISTAGAAERSAYLEKMPTDKPNGF
Ga0075435_1011794732	3300007076	Populus Rhizosphere	MATDPKKSVTPTVAKTDIERLLQMGGGDFSLRELLGMLISSAGTAERNVYLQDTPTDKSNGFYDRSLQ
Ga0075435_1017130731	3300007076	Populus Rhizosphere	MATDPKKKVTPTAIPTVAKTDVERLLQMGLGDFSIRELLGMLISSAGTAERNVYLEDTPTDKSNGFYDRSLQVGSIP
Ga0066710_1032160542	3300009012	Grasslands Soil	MATDPKKSLTPASISELAKSDVDRLLQTGLADFSLRELLGLLISSTGAAERNVYLEK
Ga0099830_110422631	3300009088	Vadose Zone Soil	MTTDPKKSLASVSISEIAKSDVDQLLQTGLADFSLRELLGLLISSAGARAQRLLRKGTYR
Ga0105245_107454912	3300009098	Miscanthus Rhizosphere	MATDPKKSLPPSAASSITKTDVDRLLQTGLADFSLRELLGVLISSASAAERNVYLQDSP
Ga0099792_108045402	3300009143	Vadose Zone Soil	MTTDPKKSLASVSISEIAKSDVDQLLQTGLADFSLRELLGLLISSAGAAERSIYLEKTNGDKPNGFYDRSLQVGTIPID
Ga0114129_104404531	3300009147	Populus Rhizosphere	KSLPSSSASTIAKTDIDRLLQTGLADFSLRELLGLLISSTGAAERNVYLQDTPTDKSNGFYDRSLQVGSIPVDLAPQDRTASTR*
Ga0111538_133056401	3300009156	Populus Rhizosphere	ISSVAKTDIDRLLQTGLADFSLRELLGLLITSAGTVERNIYLEDTPTDRPNGFYDRSLQVGSIPVDVRVPR*
Ga0105057_11078752	3300009813	Groundwater Sand	MTTDPKKSLAPASISEVAKNDVDRLLQTGLTDFTLRELLGLLISSAGSAERNVYLEDTTADRPN
Ga0126370_116567612	3300010358	Tropical Forest Soil	MATDPKKSLPSSSVSSIAKTDVDRLLQTGLADFSLRELLGLLVSSAGAAERNVYLQDVPADKPNGFYDRSLQVGSIPVDIR
Ga0126372_130702151	3300010360	Tropical Forest Soil	MATDPKKSVTPTTISSVAKTDVDRLLQTGLADFSLRELLGLLISSAGVAERNVYLQDTASDRPN
Ga0126378_108273101	3300010361	Tropical Forest Soil	MATDPKKRVPPATIPTVAKTDVERLLQMGLGDFSLRELLGMLISSAAAAERSVYLEESA
Ga0126377_121939482	3300010362	Tropical Forest Soil	MATDPKKTVPPSSISSIAKTDVDRLLQTGLADFSLRELLGLLISSAGAAER
Ga0126379_124343701	3300010366	Tropical Forest Soil	METDPKKSLPSSSVSTIAKTDIDRLLQTGLADFSLRELLGLLISSAGAAERNVYLQDTPADKSNGFYDRSLLVGSIP
Ga0126379_131210801	3300010366	Tropical Forest Soil	MATDPKKRVTPATIPTVAKTDVERLLQMGLGDFSLRELLGMLISSAAA
Ga0126379_132200901	3300010366	Tropical Forest Soil	MATDPKKSVTPTAMSTVAKTDIERLLQMGLGDFSLRELLGMLVSSAGAAERNVYLQDTPTDKSNGFYDRSLQVGSIPIDVRVA
Ga0126381_1028107071	3300010376	Tropical Forest Soil	MATDPKKTVPPSSISSIAKTDVDRLLQTGLADFSLRELLGLLISSAGA
Ga0126381_1039445722	3300010376	Tropical Forest Soil	MATDPKKSLTPSAVSSSAKTDIDRLLQTGLADFSLRELLGLLISSAGAAERHVYLQ
Ga0134124_118120991	3300010397	Terrestrial Soil	MATDPKGNLAPAAVSELVENDVDRLLQTGLADFSLRELLGLLISSAGTAERNVYLEKTGA
Ga0134123_124510732	3300010403	Terrestrial Soil	MTADPKKSLPSPTISHIEKSNIDGLLQTGLADFSLRELLGVLISSAGAAE
Ga0105246_112636012	3300011119	Miscanthus Rhizosphere	MATDPKKSLPPSAASSITKTDVDRLLQTGLADFSLRELLGVLISSASAAERNVYLQDSPTDRPNGF
Ga0137326_11481671	3300011417	Soil	MATDPKKSVAPTVISANAKTDVDRLLQTGLADFSLRELLGMLISSAGAAERNVYLQDTPTDKPNGFYDRALQVGSIP
Ga0137387_106490682	3300012349	Vadose Zone Soil	MSTDSKKRLTPAAVSEAAKNDVDRLLQTGLADFSLRELLGLLISSVGAAERNIYLEKTGTDKP
Ga0137387_109821041	3300012349	Vadose Zone Soil	MTTDPKNSLSPDSVSEFAKSNVDQLLQTGLADFSLRELLGLLISSAGAAERNVYLEKQPTDKPNGFYDRSLQLGTIPLNVR
Ga0137387_110500382	3300012349	Vadose Zone Soil	MTTDPKKSVSPGSISELAKSDVDQLLQAGLADFSLRELLGLLVSSAGAAERRVYLEK*
Ga0137386_100663863	3300012351	Vadose Zone Soil	MTTDPKNSLSPDSVSEFAKSNVDQLLQTGLADFSLRELLGLLISSAGAAERNVYLEKQPT
Ga0137366_103039722	3300012354	Vadose Zone Soil	MATDPKKSVTPTAMSAVAKTDIERLLQMGLGDFSLRELLGMLISSAGTAERNVYLQDTP
Ga0137368_109127181	3300012358	Vadose Zone Soil	MATDPKKSLPSSSASTIAKTDIDRLLQTGLADFSLRELLGLLISSAGAAERNVYLQDTPADKSNGFYDRSLHVGSIPVDVR
Ga0137385_114965631	3300012359	Vadose Zone Soil	MTADPKKSLASVSLSEIAKSDVDQLLQTGLADSSLRELLGLVISSAGAAERSVYLEKEPTDKPNGFYDRSLQL
Ga0137390_111770041	3300012363	Vadose Zone Soil	MTTDPKKSLTPASISGLAKNDVDQLLQTGLADFSLRELLGLLISSTGAAERS
Ga0157332_10187961	3300012511	Soil	MATDPKKSVTPTSISTVAKTDIERLLQMGLGDFSLRELLGMLITRAGAAERN
Ga0137397_107639242	3300012685	Vadose Zone Soil	MATDPKKSLTPSSTSSVAKTDVDRLLQTGLADFSLRELLGLLISSAGAAERNVYLQDTPT
Ga0137395_109002161	3300012917	Vadose Zone Soil	MTTDPKKSLASVSISEIAKSDVDQLLQTGLADFSLRELLGLLISSAGAAERGVYLDKKPSDKPNGFYDRSLQLGTIPVDVRVPR
Ga0137396_104802101	3300012918	Vadose Zone Soil	MTADPKKSLTSASIPEFAKNDVDRLLQTGLADFSLRELLGLLISSAGAAERNVYLEKTPTDKPNGFYDRSLQLG
Ga0126375_106106052	3300012948	Tropical Forest Soil	MATDPKKSVPPSSISSVAKTDVDRFLQTGLADFSLRELLGLLISSAGAAERNVYLQDTPSDRSNGFYDRSLQIGSIPV
Ga0126375_116527281	3300012948	Tropical Forest Soil	MTTDPKKSLPSSSASTIAKTDIDRLLQTGLADFSLRELLGLLISSAGAAERNIYLQDVLTDKPNGFYDRSLQVGSIPVDIR
Ga0157378_113765901	3300013297	Miscanthus Rhizosphere	MATDPKISLRPSAVSSSAKTDIDRLLQTGLADFSLRELLGLLITSAGTAERHIYLQDTPTDRPNGFYDRSLQVGIIPLD
Ga0075301_11189671	3300014262	Natural And Restored Wetlands	MTTDPKKSLTPASVSDVAKNEIDQLLQTGLADFSLRELLGVLISSSGTAERNVYLENTPTDKANGFYDRRLQLGTI
Ga0075354_10707881	3300014308	Natural And Restored Wetlands	MTTDSKKSLAPASISELAKSDVDQLLQTGIADYSLRDLLGLLISTAGAAERGVYLENTPTDKPNGFYDRSL
Ga0182024_125585911	3300014501	Permafrost	MTTDPKKSLTPESICEHVKSDVDQFLQTGLADFSLRELLGLLISTAGAAERSVYLEKE
Ga0157376_111465991	3300014969	Miscanthus Rhizosphere	MATDPKKSLAPASMAEVVKNDVDRLLQTGLTDFTLRELLGLLISSAGAAERNVYLEDTPVDRPN
Ga0132258_117429652	3300015371	Arabidopsis Rhizosphere	MATDPKKSLPSSSASTIAKTDIDRLLQTGLADFSLRELLGLLISTAGAAERNIYLQDAPTDKPNGFYDRSLQVGSIPVDIRVPRTR
Ga0132258_123919501	3300015371	Arabidopsis Rhizosphere	MATDPKKSLTPASLSEIAKSDVDRLLQTGLVDFSLRELLGFLISSTGVAERNVYLEKTSTDK
Ga0132256_1022541851	3300015372	Arabidopsis Rhizosphere	MATDPKGNLAPAAVSELVKNDVDRLLQTGLADFSLRELLGLLISSAGTAERNVYLEKTGADKPNGFYERALQVGTIPVDVRVPRT
Ga0132256_1031113611	3300015372	Arabidopsis Rhizosphere	MATDPKKSLPSTSGSAIAKTDIDRLLETGLADFSLRELLGLLISSAGAAERHVYLQDTSTDKANGFYDRSLQVGSIPIDIRVPRT
Ga0132257_1022009081	3300015373	Arabidopsis Rhizosphere	MTTDPKESLPSSSASTIAKTDIDRLLQTGLADFSLRELLGLLISSAGAAERNIYLQDVLT
Ga0132257_1035080311	3300015373	Arabidopsis Rhizosphere	MTTDPNKSLTPAAVSELAKSDVHQLLQTGLGDFSLRELLGLLISTAGTAERSLYLEKEPTDKPNGF
Ga0132255_1039285941	3300015374	Arabidopsis Rhizosphere	MATDPKKTLPPSYISSVAKTEVDRFLQTGLADFSLRELLGLLISSAGAAERDVYLQDTPADKSNGFYDRAL
Ga0182036_112527451	3300016270	Soil	MTTDPKKSLPSSAASTTEKTDIDRLLQTGLADFSLRELLGLLISSAGTAERNVYLQDTPTDKPNGFYDRSLLVGSIP
Ga0182032_104105741	3300016357	Soil	MATDPKKRVPPATIPSVAKTDVERLLQMGLGDFSLRELLGMLISSAAAAERSVYLEESATDKSNGFYDRSLQVGSIPVDVQVQEPADRTS
Ga0182037_100476304	3300016404	Soil	MATGSKKSVPPSPPPEFAKSEVDKVLQSGLADFSLRELLGALISSAGAAERQVYLQDTPMDKSNGFYDLSLLVGSIPVDVRVPRSRNGDFPPASLPAPYRRGYT
Ga0182038_109079872	3300016445	Soil	MTTDPKKSLPSSAASTTEKTDIDRLLQTGLADFSLRELLGLLISSAGTAERNVYLQDT
Ga0187779_110425791	3300017959	Tropical Peatland	MATDPKKRVTPATIPTVAKTDVERLLQMGLGDFSLRELLGMLISSAAVAERSVYLEESPTDKSNGFYDRSLQV
Ga0187776_110403191	3300017966	Tropical Peatland	MTTDPKKSLTPPSVSDLAKSDIDQLLQTGLADFSLRELLGLLVSSAGAAERNVYLENKPADKPNGFYGRSLQLGTIP
Ga0184605_103728181	3300018027	Groundwater Sediment	MATDPKKTLPPSEISSVAKTDIDRLLQTGLADFSLRELLGLLVSSAGAAERNVYLQDTPADKSNGFYDRSLQLGSIPIDIRVPRTRNGD
Ga0190272_106888942	3300018429	Soil	MTADPKKSLTPPSISDIAKNDIDQLLQTGLADFSLRELLGLLMSTTGTAERNVYLEKTPTDRPNGFYDRSLQMGTIRL
Ga0066669_108687132	3300018482	Grasslands Soil	MATDPKKSLPPVSIAELAKNDVDRLLQTGLADFSLRELLGLLVSSAGAAE
Ga0066669_122886562	3300018482	Grasslands Soil	MTADPKKSLTPASSVVKNDFDQLLQTGLADCSLRELLGLLISGTGAAERNLYLEKNPSEKPN
Ga0187894_101502291	3300019360	Microbial Mat On Rocks	MTTDPNKSLTPAALSELTKSDVHQLLQTGLGDFSLRELLGLLISTAGTAERSLYLEKEPTDKPNG
Ga0173482_103295852	3300019361	Soil	MTADPKKSLTSASVSDIAKNDIDQLLQTGLADFSLRELLGVLISSAGAAERNVYLEKTP
Ga0193718_11100371	3300019999	Soil	MATDPKKTLPPSEISSFAKTDIDRLLQTGLADFSLRELLGLLVSSAGAAERNVYLQDTPTDK
Ga0179596_106147292	3300021086	Vadose Zone Soil	MTTDPKKSLASVSISEIAKSDVDQLLQTGLADFSLRELLGLLISSAGAAERGVYLDKKPSDKPNG
Ga0210384_116176961	3300021432	Soil	MTTDPKKSLTPTSISELAKSDIDQFLQTGLADFSLRELLGLLISTAGTAERSVYL
Ga0224548_10382622	3300022518	Soil	MTTDPKKSLTPESICEHAKSDVDQFLQTGLADFSLRELLGLLISTAGAAERSVYLEKEPTDKP
Ga0247665_10546971	3300024219	Soil	MATDPKKSLTPGAVSSSAKTDIDRLLQTGLADFSLRELLGLLITSAGTAERNI
Ga0208586_11320962	3300025588	Arctic Peat Soil	MTTDPKKSLTPASISELAKSDIDQFLQTGLADFSLRELLGLLISTAGAAERSVYLEKE
Ga0207643_104232613	3300025908	Miscanthus Rhizosphere	MATDPKGNLAPAAVSELVKNDVDRLLQTGLADFSLRELLGLLISSAGTAERNVYLEKTGADK
Ga0207649_101520342	3300025920	Corn Rhizosphere	MATDPKKSLAPASMAEVVKNDVDRLLQTGLTDFTLRELLGLLISSAGAAERNVYLEDTCRQTQWLL
Ga0207701_112753982	3300025930	Corn, Switchgrass And Miscanthus Rhizosphere	MATDPKKSLTPSAVSSSAKTDIDRLLQTGLADFSLRELLGLLITSAGTAERHIYFTRHSNRQTQRLL
Ga0210090_10405421	3300025965	Natural And Restored Wetlands	MTTDPKKSLTPASVSDVAKNNIDQLLQTGLADFSLRELLGLLISSSGTAERNVYLEKTPTDKPNGFYDRSLQLGTIPVDVRVPRTRT
Ga0207703_113103951	3300026035	Switchgrass Rhizosphere	MTTDPKKSLASMSLSETAKSDVDQLLQTGLADFSLRELLGLLVSSAGAAERGVYLEKKPTDKPNGFYDRSLQLGTIPID
Ga0209161_105298172	3300026548	Soil	MTADPKKSLASVSLSEIAKSDVDQFLQTGLADFSLRELLGLVISSAGAAERSVYLEKEPTDKPNGFYDRSLQLGTIPVDVRVPRTRT
Ga0207777_10874751	3300027330	Tropical Forest Soil	MTTDPKKSVASTSISELAKSDVDQLLQTGLADFSLRELLGLLISSAGAAERNVYLGKTNSDKPNGFYDRSLH
Ga0208454_11336641	3300027573	Soil	MATDPKKSVAPTVISANAKTDVDRLLQTGLADFSLRELLGMLISSAGAAERNVYLQDTPTDKPNGFYDRALQVGSIPVDIRVPR
Ga0209466_10349131	3300027646	Tropical Forest Soil	MATDPKKSLTPSAVSSSAKTDIDRLLQTGLADFSLRELLGLLISSAGAAERNVYLQDAPADKSN
Ga0209626_12132921	3300027684	Forest Soil	ASISELAKSDIDQFLKTGLADFSLRELLGLLISTAGAAERSVYLEQEPTDKPNGFYDRSLRR
Ga0209465_100599572	3300027874	Tropical Forest Soil	MATDPKKSLTPTAASSIAKTDIDRLLQTGLADFSLRELLGLLISSAGAAERNVYLQETSNDKS
Ga0209590_110697761	3300027882	Vadose Zone Soil	MTTDPKKSLTPASISELTKSDIDQFLQTGLADFSLRELLGLLISTAGAAERSVYLEKEPTDKPNGYYDRSLQLGTIP
Ga0209380_108676812	3300027889	Soil	MTTDPKKSLSSESLCEHAKSDVDQFLQTGLADFSLRELLGLLISTAGSAERNVYLEKEPTDKPNGFYDRSLQLGTIPVEVRVPRTRN
Ga0207428_106583141	3300027907	Populus Rhizosphere	MATDPKKTVPSSSISPVAKTDIDRFLQTGLADFSLRELLGLLISSAGAAERHVYLQETPNDKSN
Ga0307278_104963622	3300028878	Soil	MATDPKKTLPPSEISSLAKTDIDRLLQTGLADFSLRELLGLLVSSAGAAERNVYLQDTPTDKSNG
Ga0170824_1105717421	3300031231	Forest Soil	MTTDPNKSLTPAAVSELAKSDVHQLLQTGLGDFSLRELLGLLISTAGTAERRVYLEKEPTDKPNGFYDRSLQL
Ga0170819_124111431	3300031469	Forest Soil	MTTDPKKSLPPTSISELAKSDIDQLLQTGLADFSLRELLGLMISTAGTA
Ga0310686_1151143081	3300031708	Soil	MTTDPKKSLSSESLGEHAKSDVDPFLQTGLADFSLRELLGLLISTAGSAERSVYLEKEPTDKPN
Ga0307469_122960231	3300031720	Hardwood Forest Soil	MTTDPNKSLTPAALSELAKSDIHQLLQTGLGDFSLRELLGLLISTAGTAERSVYL
Ga0307473_104877971	3300031820	Hardwood Forest Soil	MPTDPKKRVTPTAIAESAKDSVDRLLENGLADFSLRELLGLLISSAGIAERNVHLEDTPTDKSNGFYE
Ga0310904_104910062	3300031854	Soil	MTTDPNKSLTPAALSELTKSDVHQLLQTGLGDFSLRELLGLLISTAGTAERSVYLEKEPTDKPNGFYDRSLQLGTIPVEVRVLISV
Ga0307406_120497151	3300031901	Rhizosphere	MATDPKKSVTPTAMSTVAKTDIERLLQMGLGDFSLRELLGMLISSAGAAER
Ga0310891_102650171	3300031913	Soil	MTTDPNKSLTPAAVSELAKSDVHQLLQTGLGDFSLRELLGLLISTAGTAE
Ga0306926_127800061	3300031954	Soil	MATDPKKSLTPSTVSSMAKTDIDRLLQTGLADFSLRELLGLLISSAGAAERN
Ga0307470_107474542	3300032174	Hardwood Forest Soil	MPTDPKKRVTPTAIAESAKDSVDRLLENGLADFSLRELLGLLIS

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F062889

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences