NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome Family F062658

Metagenome Family F062658

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F062658
Family Type Metagenome
Number of Sequences 130
Average Sequence Length 63 residues
Representative Sequence MLTEAALRLIGLVVAVSAGVWAALLALAEEAAVGEALHTLGDAPPIAAERRVPLHRALHV
Number of Associated Samples 111
Number of Associated Scaffolds 130

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 42.40 %
% of genes near scaffold ends (potentially truncated) 95.38 %
% of genes from short scaffolds (< 2000 bps) 86.15 %
Associated GOLD sequencing projects 105
AlphaFold2 3D model prediction Yes
3D model pTM-score0.53

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Bacteria (95.385 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil
(20.000 % of family members)
Environment Ontology (ENVO) Unclassified
(41.538 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(49.231 % of family members)


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Multiple Sequence Alignments

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Transmembrane (alpha-helical) Signal Peptide: Yes Secondary Structure distribution: α-helix: 55.68%    β-sheet: 0.00%    Coil/Unstructured: 44.32%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.53
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 130 Family Scaffolds
PF02130YbeY 69.23
PF01966HD 12.31
PF076987TM-7TMR_HD 12.31
PF00152tRNA-synt_2 1.54
PF02562PhoH 0.77
PF01336tRNA_anti-codon 0.77
PF13416SBP_bac_8 0.77
PF02878PGM_PMM_I 0.77
PF00400WD40 0.77

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 130 Family Scaffolds
COG0319ssRNA-specific RNase YbeY, 16S rRNA maturation enzymeTranslation, ribosomal structure and biogenesis [J] 69.23
COG1480Cyclic di-AMP-specific phosphodiesterase PgpH, HD superfamilySignal transduction mechanisms [T] 12.31
COG0017Aspartyl/asparaginyl-tRNA synthetaseTranslation, ribosomal structure and biogenesis [J] 1.54
COG0173Aspartyl-tRNA synthetaseTranslation, ribosomal structure and biogenesis [J] 1.54
COG1190Lysyl-tRNA synthetase, class IITranslation, ribosomal structure and biogenesis [J] 1.54
COG2269Elongation factor P--beta-lysine ligase (EF-P beta-lysylation pathway)Translation, ribosomal structure and biogenesis [J] 1.54
COG0033Phosphoglucomutase/phosphomannomutaseCarbohydrate transport and metabolism [G] 0.77
COG1109PhosphomannomutaseCarbohydrate transport and metabolism [G] 0.77
COG1702Phosphate starvation-inducible protein PhoH, predicted ATPaseSignal transduction mechanisms [T] 0.77
COG1875Predicted ribonuclease YlaK, contains NYN-type RNase and PhoH-family ATPase domainsGeneral function prediction only [R] 0.77

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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms95.38 %
UnclassifiedrootN/A4.62 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300000881|JGI10215J12807_1237027All Organisms → cellular organisms → Bacteria986Open in IMG/M
3300002561|JGI25384J37096_10237973All Organisms → cellular organisms → Bacteria532Open in IMG/M
3300002908|JGI25382J43887_10092266All Organisms → cellular organisms → Bacteria1611Open in IMG/M
3300002912|JGI25386J43895_10178671All Organisms → cellular organisms → Bacteria533Open in IMG/M
3300004114|Ga0062593_101177528All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes802Open in IMG/M
3300005166|Ga0066674_10378661All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes660Open in IMG/M
3300005167|Ga0066672_11010390All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes507Open in IMG/M
3300005171|Ga0066677_10055893All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes1986Open in IMG/M
3300005171|Ga0066677_10452356All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes735Open in IMG/M
3300005176|Ga0066679_10155736All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes1434Open in IMG/M
3300005177|Ga0066690_10851669All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes587Open in IMG/M
3300005184|Ga0066671_10822364All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes593Open in IMG/M
3300005187|Ga0066675_10099087All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes1919Open in IMG/M
3300005445|Ga0070708_101846599All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes560Open in IMG/M
3300005447|Ga0066689_10589370All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes701Open in IMG/M
3300005447|Ga0066689_10888111All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes551Open in IMG/M
3300005518|Ga0070699_100173964All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes1908Open in IMG/M
3300005545|Ga0070695_100201227All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes1424Open in IMG/M
3300005549|Ga0070704_100080230All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes2399Open in IMG/M
3300005552|Ga0066701_10646268All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes640Open in IMG/M
3300005557|Ga0066704_11011948All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes513Open in IMG/M
3300005586|Ga0066691_10112093All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes1542Open in IMG/M
3300005586|Ga0066691_10561312All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes680Open in IMG/M
3300005881|Ga0075294_1024463All Organisms → cellular organisms → Bacteria591Open in IMG/M
3300006034|Ga0066656_10042236All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes2596Open in IMG/M
3300006755|Ga0079222_10305340All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes1043Open in IMG/M
3300006794|Ga0066658_10067151All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes1594Open in IMG/M
3300006797|Ga0066659_11045062All Organisms → cellular organisms → Bacteria682Open in IMG/M
3300006797|Ga0066659_11145529All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes650Open in IMG/M
3300006845|Ga0075421_100652120All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes1230Open in IMG/M
3300006853|Ga0075420_101577104All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes563Open in IMG/M
3300006914|Ga0075436_100504032All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes886Open in IMG/M
3300006954|Ga0079219_11805481All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes572Open in IMG/M
3300009012|Ga0066710_100717576All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae1526Open in IMG/M
3300009012|Ga0066710_102560611All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes735Open in IMG/M
3300009090|Ga0099827_11273428All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes640Open in IMG/M
3300009090|Ga0099827_11333721All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes624Open in IMG/M
3300009162|Ga0075423_12572690All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes556Open in IMG/M
3300009162|Ga0075423_13105820All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes509Open in IMG/M
3300010301|Ga0134070_10031912All Organisms → cellular organisms → Bacteria1744Open in IMG/M
3300010304|Ga0134088_10273825All Organisms → cellular organisms → Bacteria814Open in IMG/M
3300010322|Ga0134084_10466491All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes506Open in IMG/M
3300010333|Ga0134080_10005020All Organisms → cellular organisms → Bacteria4553Open in IMG/M
3300010335|Ga0134063_10348952All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes719Open in IMG/M
3300010359|Ga0126376_11638551All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium677Open in IMG/M
3300010399|Ga0134127_10503243All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes1223Open in IMG/M
3300011435|Ga0137426_1000896All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae6574Open in IMG/M
3300011438|Ga0137451_1026964All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes1662Open in IMG/M
3300012173|Ga0137327_1020281All Organisms → cellular organisms → Bacteria1368Open in IMG/M
3300012201|Ga0137365_10227378All Organisms → cellular organisms → Bacteria1391Open in IMG/M
3300012202|Ga0137363_11315420All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes611Open in IMG/M
3300012203|Ga0137399_11158489All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes651Open in IMG/M
3300012204|Ga0137374_10112402All Organisms → cellular organisms → Bacteria2531Open in IMG/M
3300012205|Ga0137362_10561438All Organisms → cellular organisms → Bacteria985Open in IMG/M
3300012208|Ga0137376_10192416All Organisms → cellular organisms → Bacteria1764Open in IMG/M
3300012208|Ga0137376_11245610All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes634Open in IMG/M
3300012210|Ga0137378_10105981All Organisms → cellular organisms → Bacteria2585Open in IMG/M
3300012210|Ga0137378_11383554All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes618Open in IMG/M
3300012349|Ga0137387_10867870All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes653Open in IMG/M
3300012351|Ga0137386_10202257All Organisms → cellular organisms → Bacteria1427Open in IMG/M
3300012354|Ga0137366_10197676All Organisms → cellular organisms → Bacteria1503Open in IMG/M
3300012354|Ga0137366_11198563All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes517Open in IMG/M
3300012355|Ga0137369_10089112All Organisms → cellular organisms → Bacteria2562Open in IMG/M
3300012357|Ga0137384_10036343All Organisms → cellular organisms → Bacteria4056Open in IMG/M
3300012362|Ga0137361_11078910All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes724Open in IMG/M
3300012582|Ga0137358_10561410All Organisms → cellular organisms → Bacteria767Open in IMG/M
3300012925|Ga0137419_11050416All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes677Open in IMG/M
3300012925|Ga0137419_11796432All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes525Open in IMG/M
3300012972|Ga0134077_10128185All Organisms → cellular organisms → Bacteria1000Open in IMG/M
3300012972|Ga0134077_10265397All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes714Open in IMG/M
3300014154|Ga0134075_10354438All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes643Open in IMG/M
3300014154|Ga0134075_10378581All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes623Open in IMG/M
3300014157|Ga0134078_10046900All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae1481Open in IMG/M
3300015054|Ga0137420_1156269All Organisms → cellular organisms → Bacteria851Open in IMG/M
3300015054|Ga0137420_1483309All Organisms → cellular organisms → Bacteria1824Open in IMG/M
3300015358|Ga0134089_10165714All Organisms → cellular organisms → Bacteria878Open in IMG/M
3300015359|Ga0134085_10162914All Organisms → cellular organisms → Bacteria950Open in IMG/M
3300015374|Ga0132255_100593381All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes1637Open in IMG/M
3300017654|Ga0134069_1056168All Organisms → cellular organisms → Bacteria1244Open in IMG/M
3300017927|Ga0187824_10061276All Organisms → cellular organisms → Bacteria1170Open in IMG/M
3300017997|Ga0184610_1277283All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes554Open in IMG/M
3300018056|Ga0184623_10094917All Organisms → cellular organisms → Bacteria1377Open in IMG/M
3300018068|Ga0184636_1184898All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes737Open in IMG/M
3300018074|Ga0184640_10312066All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes714Open in IMG/M
3300018078|Ga0184612_10144883All Organisms → cellular organisms → Bacteria1243Open in IMG/M
3300018431|Ga0066655_10221635All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae1186Open in IMG/M
3300018433|Ga0066667_11788346All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes555Open in IMG/M
3300018468|Ga0066662_11254186Not Available755Open in IMG/M
3300021073|Ga0210378_10055600All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes1558Open in IMG/M
3300021080|Ga0210382_10309315All Organisms → cellular organisms → Bacteria → Proteobacteria695Open in IMG/M
3300022756|Ga0222622_11083879All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes589Open in IMG/M
3300025159|Ga0209619_10642304All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes500Open in IMG/M
3300025167|Ga0209642_10422266All Organisms → cellular organisms → Bacteria744Open in IMG/M
3300025174|Ga0209324_10749384All Organisms → cellular organisms → Bacteria550Open in IMG/M
3300025327|Ga0209751_10219596All Organisms → cellular organisms → Bacteria1623Open in IMG/M
3300025912|Ga0207707_10493575All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes1045Open in IMG/M
3300026297|Ga0209237_1077928All Organisms → cellular organisms → Bacteria1530Open in IMG/M
3300026298|Ga0209236_1197326All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes768Open in IMG/M
3300026307|Ga0209469_1057358All Organisms → cellular organisms → Bacteria1210Open in IMG/M
3300026310|Ga0209239_1269950All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes586Open in IMG/M
3300026310|Ga0209239_1301509All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes554Open in IMG/M
3300026310|Ga0209239_1308310All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes548Open in IMG/M
3300026313|Ga0209761_1180302All Organisms → cellular organisms → Bacteria959Open in IMG/M
3300026320|Ga0209131_1118704All Organisms → cellular organisms → Bacteria1374Open in IMG/M
3300026325|Ga0209152_10264811All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes639Open in IMG/M
3300026335|Ga0209804_1171654All Organisms → cellular organisms → Bacteria948Open in IMG/M
3300026529|Ga0209806_1167246All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes819Open in IMG/M
3300026530|Ga0209807_1059821All Organisms → cellular organisms → Bacteria1732Open in IMG/M
3300026537|Ga0209157_1027016All Organisms → cellular organisms → Bacteria3399Open in IMG/M
3300026538|Ga0209056_10106530All Organisms → cellular organisms → Bacteria2268Open in IMG/M
3300027573|Ga0208454_1009497All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes2487Open in IMG/M
3300027725|Ga0209178_1043702All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium1428Open in IMG/M
3300027903|Ga0209488_10273715All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes1264Open in IMG/M
3300028536|Ga0137415_11422850All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes516Open in IMG/M
3300031199|Ga0307495_10046817All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae869Open in IMG/M
3300031562|Ga0310886_10856789All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes575Open in IMG/M
3300031820|Ga0307473_10017375All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae2835Open in IMG/M
3300032205|Ga0307472_100053254All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae2536Open in IMG/M
3300032205|Ga0307472_101870383All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes598Open in IMG/M
3300032205|Ga0307472_101954126All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes586Open in IMG/M
3300032421|Ga0310812_10373724All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes639Open in IMG/M
3300032954|Ga0335083_10476320All Organisms → cellular organisms → Bacteria1050Open in IMG/M
3300033805|Ga0314864_0065638All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae848Open in IMG/M
3300033813|Ga0364928_0113664All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes645Open in IMG/M
3300034164|Ga0364940_0216113All Organisms → cellular organisms → Bacteria563Open in IMG/M


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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil20.00%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil19.23%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil11.54%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil10.77%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere4.62%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment3.85%
SoilEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Soil3.08%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil3.08%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere3.08%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil2.31%
Groundwater SedimentEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment1.54%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil1.54%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil1.54%
SoilEnvironmental → Terrestrial → Soil → Loam → Grasslands → Soil1.54%
SoilEnvironmental → Terrestrial → Soil → Loam → Unclassified → Soil1.54%
SedimentEnvironmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment1.54%
Freshwater SedimentEnvironmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment0.77%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment0.77%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil0.77%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil0.77%
Peatlands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil0.77%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil0.77%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil0.77%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Soil0.77%
Rice Paddy SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Rice Paddy Soil0.77%
PeatlandEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Peatland0.77%
Corn RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere0.77%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere0.77%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300000881Soil microbial communities from Great Prairies - Wisconsin Restored Prairie soilEnvironmentalOpen in IMG/M
3300001356Peat soil microbial communities from Weissenstadt, Germany - SII-SIP-2007EnvironmentalOpen in IMG/M
3300002561Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_40cmEnvironmentalOpen in IMG/M
3300002908Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_40cmEnvironmentalOpen in IMG/M
3300002912Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_40cmEnvironmentalOpen in IMG/M
3300004114Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5EnvironmentalOpen in IMG/M
3300005166Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_123EnvironmentalOpen in IMG/M
3300005167Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121EnvironmentalOpen in IMG/M
3300005171Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126EnvironmentalOpen in IMG/M
3300005176Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128EnvironmentalOpen in IMG/M
3300005177Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139EnvironmentalOpen in IMG/M
3300005184Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_120EnvironmentalOpen in IMG/M
3300005187Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124EnvironmentalOpen in IMG/M
3300005445Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaGEnvironmentalOpen in IMG/M
3300005447Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138EnvironmentalOpen in IMG/M
3300005518Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaGEnvironmentalOpen in IMG/M
3300005545Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaGEnvironmentalOpen in IMG/M
3300005549Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaGEnvironmentalOpen in IMG/M
3300005552Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150EnvironmentalOpen in IMG/M
3300005555Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141EnvironmentalOpen in IMG/M
3300005557Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153EnvironmentalOpen in IMG/M
3300005586Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140EnvironmentalOpen in IMG/M
3300005881Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_25C_0N_202EnvironmentalOpen in IMG/M
3300006034Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_105EnvironmentalOpen in IMG/M
3300006755Agricultural soil microbial communities from Georgia to study Nitrogen management - GA PlitterEnvironmentalOpen in IMG/M
3300006794Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107EnvironmentalOpen in IMG/M
3300006797Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108EnvironmentalOpen in IMG/M
3300006845Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5Host-AssociatedOpen in IMG/M
3300006853Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD4Host-AssociatedOpen in IMG/M
3300006854Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4Host-AssociatedOpen in IMG/M
3300006914Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5Host-AssociatedOpen in IMG/M
3300006954Agricultural soil microbial communities from Georgia to study Nitrogen management - GA ControlEnvironmentalOpen in IMG/M
3300009012Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159EnvironmentalOpen in IMG/M
3300009090Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaGEnvironmentalOpen in IMG/M
3300009162Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2Host-AssociatedOpen in IMG/M
3300010301Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09082015EnvironmentalOpen in IMG/M
3300010304Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09182015EnvironmentalOpen in IMG/M
3300010322Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_2_24_1 metaGEnvironmentalOpen in IMG/M
3300010333Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_2_24_1 metaGEnvironmentalOpen in IMG/M
3300010335Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09082015EnvironmentalOpen in IMG/M
3300010359Tropical forest soil microbial communities from Panama - MetaG Plot_15EnvironmentalOpen in IMG/M
3300010399Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3EnvironmentalOpen in IMG/M
3300011435Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT660_2EnvironmentalOpen in IMG/M
3300011438Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT500_2EnvironmentalOpen in IMG/M
3300012173Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT517_2EnvironmentalOpen in IMG/M
3300012201Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaGEnvironmentalOpen in IMG/M
3300012202Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaGEnvironmentalOpen in IMG/M
3300012203Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaGEnvironmentalOpen in IMG/M
3300012204Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaGEnvironmentalOpen in IMG/M
3300012205Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaGEnvironmentalOpen in IMG/M
3300012208Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaGEnvironmentalOpen in IMG/M
3300012210Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaGEnvironmentalOpen in IMG/M
3300012349Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaGEnvironmentalOpen in IMG/M
3300012351Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaGEnvironmentalOpen in IMG/M
3300012354Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_60_16 metaGEnvironmentalOpen in IMG/M
3300012355Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_113_16 metaGEnvironmentalOpen in IMG/M
3300012357Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaGEnvironmentalOpen in IMG/M
3300012362Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaGEnvironmentalOpen in IMG/M
3300012582Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaGEnvironmentalOpen in IMG/M
3300012925Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012972Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_24_1 metaGEnvironmentalOpen in IMG/M
3300014154Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09212015EnvironmentalOpen in IMG/M
3300014157Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_2_24_1 metaGEnvironmentalOpen in IMG/M
3300015054Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (PacBio error correction)EnvironmentalOpen in IMG/M
3300015358Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_40cm_5_24_1 metaGEnvironmentalOpen in IMG/M
3300015359Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09182015EnvironmentalOpen in IMG/M
3300015374Col-0 rhizosphere combined assemblyHost-AssociatedOpen in IMG/M
3300017654Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_2_24_1 metaGEnvironmentalOpen in IMG/M
3300017927Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_4EnvironmentalOpen in IMG/M
3300017997Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100_coexEnvironmentalOpen in IMG/M
3300018056Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100_b1EnvironmentalOpen in IMG/M
3300018068Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_90_b2EnvironmentalOpen in IMG/M
3300018074Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_200_b2EnvironmentalOpen in IMG/M
3300018078Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_60_coexEnvironmentalOpen in IMG/M
3300018431Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104EnvironmentalOpen in IMG/M
3300018433Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116EnvironmentalOpen in IMG/M
3300018468Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111EnvironmentalOpen in IMG/M
3300021073Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60_b1 redoEnvironmentalOpen in IMG/M
3300021080Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_coex redoEnvironmentalOpen in IMG/M
3300022756Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1EnvironmentalOpen in IMG/M
3300025159Soil microbial communities from Rifle, Colorado, USA - sediment 16ft 3EnvironmentalOpen in IMG/M
3300025167Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 19_2 (SPAdes)EnvironmentalOpen in IMG/M
3300025174Soil microbial communities from Rifle, Colorado, USA - sediment 19ft 3EnvironmentalOpen in IMG/M
3300025327Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 13_1 (SPAdes)EnvironmentalOpen in IMG/M
3300025912Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes)EnvironmentalOpen in IMG/M
3300026297Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_40cm (SPAdes)EnvironmentalOpen in IMG/M
3300026298Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_40cm (SPAdes)EnvironmentalOpen in IMG/M
3300026307Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_123 (SPAdes)EnvironmentalOpen in IMG/M
3300026310Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_2_20cm (SPAdes)EnvironmentalOpen in IMG/M
3300026313Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_40cm (SPAdes)EnvironmentalOpen in IMG/M
3300026320Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_40cm (SPAdes)EnvironmentalOpen in IMG/M
3300026325Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107 (SPAdes)EnvironmentalOpen in IMG/M
3300026326Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127 (SPAdes)EnvironmentalOpen in IMG/M
3300026335Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139 (SPAdes)EnvironmentalOpen in IMG/M
3300026529Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152 (SPAdes)EnvironmentalOpen in IMG/M
3300026530Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154 (SPAdes)EnvironmentalOpen in IMG/M
3300026537Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135 (SPAdes)EnvironmentalOpen in IMG/M
3300026538Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114 (SPAdes)EnvironmentalOpen in IMG/M
3300027573Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT100 (SPAdes)EnvironmentalOpen in IMG/M
3300027725Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200 (SPAdes)EnvironmentalOpen in IMG/M
3300027903Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)EnvironmentalOpen in IMG/M
3300028536Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300031199Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 7_SEnvironmentalOpen in IMG/M
3300031562Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D3EnvironmentalOpen in IMG/M
3300031820Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515EnvironmentalOpen in IMG/M
3300032205Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05EnvironmentalOpen in IMG/M
3300032421Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NN3EnvironmentalOpen in IMG/M
3300032954Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.2EnvironmentalOpen in IMG/M
3300033805Tropical peat soil microbial communities from peatlands in Loreto, Peru - MAQ_50_10EnvironmentalOpen in IMG/M
3300033813Sediment microbial communities from East River floodplain, Colorado, United States - 30_j17EnvironmentalOpen in IMG/M
3300034164Sediment microbial communities from East River floodplain, Colorado, United States - 14_s17EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
JGI10215J12807_123702713300000881SoilMFTGTALPIIGLLVAVGAGVWAALLALAEEAAMGEALHTLGDAPPIAAERRVPLHRALHIARL
JGI12269J14319_1012525813300001356Peatlands SoilMPDAVVVIGALLALAATLGAGFFALAEEAAVGEALHTLGDAPPAAAGTHVPLHRALH
JGI25384J37096_1023797323300002561Grasslands SoilMLGSTALLLGGALAALGAGLWAGLLALAEEAAVGEALHTLGDAPPRTVGGRVPLHRALHVSRLALLVLGAVGASRAL
JGI25382J43887_1009226633300002908Grasslands SoilMLTAAALRLIGLVVAISAGVWAALLALGEEAAVGEALHTLGDAPPIAAERRVPLHRALH
JGI25386J43895_1017867113300002912Grasslands SoilMLTAAALRLIGLVVAISAGVWAALLALGEEAAVGEALHTLGDAPPIAAERR
Ga0062593_10117752813300004114SoilMVTATALLIGGAIIALGAALWAGLLALGEEVAVGEALHTLGDAPAPSAARVPLHRALHVARLAMLV
Ga0066674_1037866123300005166SoilMSFGAVALSWMGVAAAIVAVGWAGLLALGEEAAVGEMLHTLGDAPPTAVRGRVPLHRALHVARL
Ga0066672_1101039013300005167SoilVTLTDAALTLGGALVAGAAALWAGLLALGEEAAVGEALHTLGDAPPATVGARVPLHRALHVA
Ga0066677_1005589333300005171SoilMPTEAALRVTGLIVAIVAVVWAALLALAEEAAVGEALHTLGDAPPIAAERRVP
Ga0066677_1045235613300005171SoilVTLAGTAVTLVGAAVAGAAALWSGLLALGEEAAVGEALHTLGDAPPVAVGGHVPLHRALHVTRLTL
Ga0066679_1015573613300005176SoilMPTEAALRVTGLIVAIVAVVWAALLALAEEAAVGEALHTLGDAPPIAAERRVPLHRALHVARLALLVLG
Ga0066690_1085166923300005177SoilMRTEAALRVTGLIVAIVAVVWAALLALAEEAAVGEALHTLGDAPPIAAERRVPLHR
Ga0066671_1082236423300005184SoilMLTEAALRLIGLVVAISAGVWAALLALAEEAAVGEALHTLGDAPPIAAERRVPLHRALHVARLALLVLGAV
Ga0066675_1009908713300005187SoilMPTEAALRVTGLIVAIVAVVWAALLALAEEAAVGEALHTLGDAPPIAAERRVPLH
Ga0070708_10184659913300005445Corn, Switchgrass And Miscanthus RhizosphereVTLTDAALTLGGALVAGAAALWAGLLALGEEAAVGEALHTLGDAPPTTVGARVPLHRALHVARLALLVLGA
Ga0066689_1058937013300005447SoilVTLTDAALTLGGALVAGAAALWAGLLALGEEAAVGEALHTLGDAPPTTVGARVPLHRALHVARLA
Ga0066689_1088811113300005447SoilMLTAAALRLIGLVVGISAGVWAALLTLGEEAAVGEALHTLGDAPPIAAERRVPLHRAL
Ga0070699_10017396433300005518Corn, Switchgrass And Miscanthus RhizosphereMLTAAALRLIGLVVGISAGIWAALLTLGEEAAVGEALHTLGDAPPIAAERRVPLHRALHIARLALLVLGAVATANAVA
Ga0070695_10020122713300005545Corn, Switchgrass And Miscanthus RhizosphereMFTGTALPIIGLLVAVGAGVWAALLALAEEAAVGEALHTLGDAPPIAAERRVPLH
Ga0070704_10008023033300005549Corn, Switchgrass And Miscanthus RhizosphereMFTGTALPIIGLLVAVGAGVWAALLALAEEAAVGEALHTLGDAPPIAAERRVPLHR
Ga0066701_1064626813300005552SoilMLTEAALRVTGLVVAIVAVVWAALLALAEEAAVGEALHTLGDAPPIAAERRVPLHRALHVAR
Ga0066692_1009741733300005555SoilVTLTGAALTLGGALVAGTAALWAGLLALGEEAAVGEALHTLGDAPPMTVGARVPLHRALHVGRLALLVLGAVAAGHALDWWDRPWAEA
Ga0066704_1101194823300005557SoilMLTEAALRLIGLVVAISAGVWAALLALAEEAAVGEALHTLGDAPPMAAERRVPLHRALH
Ga0066691_1011209313300005586SoilMLTEAALRLIGLVVAVSAGVWAALLALAEEAAVGEALHTLGDAPPIAAERRVPLHR
Ga0066691_1056131233300005586SoilMLTEAALRLIGLVVAISTGVWAALLALGEEAAVGEALHTLGDAPPIAAERRVP
Ga0075294_102446313300005881Rice Paddy SoilMTATLVVWGGVLLATAAVLWAALLALGEEAAVGEALHTLGDAPPVDAASRVPLHRALHVARLALLILGGVAAGHA
Ga0066656_1004223613300006034SoilMLTEAALRIIGLVVAISAGVWAALLALGEEAAVGEALHTLGDAPPVAAERRVPLHRALHIARLALLVLGAV
Ga0079222_1030534033300006755Agricultural SoilMMAVVGVALTFGGALVVLATALWAGLLTLGEEAAVGEALHTLGDAPPPTRGGRVPLHRALYVARLALLVLGAV
Ga0066658_1006715113300006794SoilMTFTGAALTLGGALVAGAAALWAGLLALGEEAAVGEALHTLGDAPPTTVGARVPLHRAL
Ga0066659_1104506213300006797SoilVTLTGAALTLGGALVAGAAALWAGLLALGEEAAVGEALHTLGDAPPVAAGGHVPLHRALHVTRLALLV
Ga0066659_1114552913300006797SoilMLTEAALRLIGLVVAVSAGVWAALLALAEEAAVGEALHTLGDAPPIAAERRVPLHRALHVARLALLVLGAVA
Ga0075421_10065212013300006845Populus RhizosphereMLTETALRFAGLVVALLSAVWAALLALAEEAAVGEALHTLGDAPPASAGSRVPL
Ga0075420_10157710423300006853Populus RhizosphereMLGDMLLLWGGMLAAVGAVAWAGLLAFGEEAAVGEALHTLGDAPPADAMRRVPLHRAL
Ga0075425_10179492913300006854Populus RhizosphereMLTAAALRLIGLVVGISAGIWAALLTLGEEAAVGEALHTLGDAPPIAAERRVPLHRALHIARLALLVLGAVATANAVAWWTRPWAEALVTLSVGTL
Ga0075436_10050403213300006914Populus RhizosphereMTFGAEALSWLGVASAILAVVWAGLLALGEEAAVGEMLHTLGDAPPLAVRGRVPLHRALHVARLGLLV
Ga0079219_1180548123300006954Agricultural SoilMLTEAALRLIGLVVAVSAGVWAALLALAEEAAVGEALHTLGDAPPIAAER
Ga0066710_10071757613300009012Grasslands SoilMLTEAALRLIGLVVAISAGVWAALLALAEEAAVGEALHTLGDAPPMAAERRVPLHRALHV
Ga0066710_10256061113300009012Grasslands SoilMLTATAFLIGGVAAALIAALWAGLLALGEEAAVGEALHTLGDAPPATTGARVPLHRALHVARLALLV
Ga0099827_1127342823300009090Vadose Zone SoilMLTEAALRLIGLVVAVSAGVWAALLALAEEAAVGEALHTLGDAPPMAAERRVPLHRALHVARLALLV
Ga0099827_1133372123300009090Vadose Zone SoilMLTEAALRVIGLVVAISAGVWAALLALGEEAAVGEALHTLGDAPPIAAERRVPLHRALHIARLAL
Ga0075423_1257269013300009162Populus RhizosphereMLTEAALRLIGLVVAVSAGLWAAFLALGEEAAVGEALHTLGDAPPMAAERRVPLHRALHV
Ga0075423_1310582013300009162Populus RhizosphereMLTEAALRLIGLVVAIGAGVWAALLALAEEAAVGEALHTLGDAPPIAAERRVPLHRA
Ga0134070_1003191213300010301Grasslands SoilMLTETALRVIGLVVAISAGVWAALLALGEEAAVGEALHTLGDAPPALAERRVPLHRAL
Ga0134088_1027382533300010304Grasslands SoilMLGSTALLLGGALAALGAGLWAGLLALAEEAAVGEALHTLGDAPPRTVGGRVPLHRALHVSRLALLVL
Ga0134084_1046649113300010322Grasslands SoilMLTEAALRLIGLVVALSAGVWAALLALGEEAAVGEALHTLGDAPPIAAERRVPLHRALHIARLALLVL
Ga0134080_1000502013300010333Grasslands SoilMTLTVAALTLGGALVAGTAALWAGLLALGEEAAVGEALHTLGDPPPPTVGARVPLHRALHVARLAL
Ga0134063_1034895233300010335Grasslands SoilMTLTVAALTLGGALLAGTAALWAGLLALGEEAAVGEALHTLGDAPPPTVGARVPLHRALHVARLALLVLA
Ga0126376_1163855113300010359Tropical Forest SoilMFLDTAGLVVGALLALFAALWAGLVALAEEGAVGDASHTLGDAPPTAADAVVPLHRALHVARLALLVVGA
Ga0134127_1050324313300010399Terrestrial SoilMFTETALRYAGLVAALVGAVWAALLALAEEAAVGEALHTLGDAPPVSAGS
Ga0137426_100089673300011435SoilMLTEAALRVIGLVVAVGAGVWAALLALAEEAAMGEALHTLGDAPPIAA
Ga0137451_102696433300011438SoilMLTETALRVAGLVVALLAAVWAALLALAEEAAVGEALHTLGDAPPTSAGSRVPLHRALHV
Ga0137327_102028113300012173SoilMLTEAALRIIGLVVAVGAGVWAALLALAEEAAVGEALHTLGDAPPIAAE
Ga0137365_1022737813300012201Vadose Zone SoilMLTEAALRIIGLVVAISAGAWAALLALAEEAAVGEALHTLGDAPPIAAERRVPLHRALH
Ga0137363_1131542023300012202Vadose Zone SoilMLTEAALRLIGLVVAMSAGVWAALLALGEEAAVGEALHTLGDAPPIAAERRVPL
Ga0137399_1115848913300012203Vadose Zone SoilMLTEAALRVIGLVVAISAGVWAALLALGEEAAVGEALHTLGDAPPVAAERRVPLHRALHIARLALLVLG
Ga0137374_1011240233300012204Vadose Zone SoilMLTETALTLTGLLAALLAAAWAALLALGEEAAVGEALHTLGDAPPVSAGSRVPLHR
Ga0137362_1056143833300012205Vadose Zone SoilMLTEAALRLIGLVVAMSAGVWAALLALGEEAAVGEALHTLGDAPPIAAERRV
Ga0137376_1019241613300012208Vadose Zone SoilVTLTDAALTLGGALVGGAAALWAGLLALGEEAAVGEALHTLGDAPPTTVGARVPLHRALHVA
Ga0137376_1124561013300012208Vadose Zone SoilVTLTGAALTLGGALVAGAAALWAGLLALGEEAAVGEALHTLGDAPPTTVGARVPLHRALHVGRLALLVLGA
Ga0137378_1010598133300012210Vadose Zone SoilMPAETVLRLAGLVAALVGAVWAALLALAEEAAVGEALHTLGDAPPVSAGSRVPLHRAL
Ga0137378_1138355423300012210Vadose Zone SoilMLADAVLTFGGVIIAVAAVLWAGVLALGEEAAVGEALHTLGDAPPALVGRRVPLHRALHVARLALLVLG
Ga0137387_1086787013300012349Vadose Zone SoilMLTEAALRVTGLVVAIVAVVWAALLALAEEAAVGEALHTLGDAPPIAAERRVPLHRALHV
Ga0137386_1020225713300012351Vadose Zone SoilMSFGAVALSWMGVAAAIVAVAWAGLLALGEEAAVGEMLHTLGDAPPTAVRGRVPLHRALHVARLALLVL
Ga0137366_1019767633300012354Vadose Zone SoilMLTEAALQLIGLVVAISAGVWAALLALGEEAAVGEALHTLGDAPPIAAERRVPLHRALHIARLALLVLG
Ga0137366_1119856313300012354Vadose Zone SoilMPAETVLRLAGLVAALVGAVWAALLALAEEAAVGEALHTLGDAPPVSAGSRVPLHRALHVARLGLL
Ga0137369_1008911213300012355Vadose Zone SoilMLTEAALRLVGLVVAISAGVWAALLALAEEAAVGEALHTLGDAPPMAAERRVPLHRALHV
Ga0137384_1003634313300012357Vadose Zone SoilMPAETVLRLAGLVAALVGAVWAALLALAEEAAVGEALHTLGDAPPVSAGSRV
Ga0137361_1107891013300012362Vadose Zone SoilMLGSTALLLSGALVALGAALWAGLLALAEEAAVGEALHTLGDAPPQTVSGRVPLHRALHVSRLALLVLGAVG
Ga0137358_1056141033300012582Vadose Zone SoilMLTEAALRLIGLVVAVSAGVWAALLALAEEAAVGEALHTLGDAPPIAAERRVPLHRALHV
Ga0137419_1105041613300012925Vadose Zone SoilMLTEAALRIIGLVVAISAGTWAALLALAEEAAVGEALHTLGDAPPIAAERRVPLHRAL
Ga0137419_1179643213300012925Vadose Zone SoilMPTATALFLGGVAAALVAAVWAGLLALGEEAAVGEALHTLGDAPPARKGARVPLHRALHVAR
Ga0134077_1012818533300012972Grasslands SoilMLGSTALLLGGALAALGAGLWAGLLALAEEAAVGEALHTLGDAPPRTVGGRVPLHRALHVSRLALLVLGA
Ga0134077_1026539733300012972Grasslands SoilMLTEAALRVTGLVVAIVAVVWAALLALAEEAAVGEALHTLGDAPPVAAERRVPLHRALHVARLALL
Ga0134075_1035443823300014154Grasslands SoilVTLTDAALTLGGALVAGAAALWAGLLALGEEAAVGEALHTLGDAPPTTVGARVPLHRALYVARL
Ga0134075_1037858123300014154Grasslands SoilMTFTGAALTLGGALVGGAAALWAGLLALGEEAAVGEALHSLGDAPPTTVGARVPLHRALHVARLALL
Ga0134078_1004690013300014157Grasslands SoilMLTETALRVIGLVVAISAGVWAALLALGEEAAVGEALHTLGDAPPALAERRVPLHRALYIARLALLVLGAV
Ga0134078_1020955413300014157Grasslands SoilVTLAGTAVTLVGAAVAGAAALWSGLLALGEEAAVGEALHTLGDAPPVAVGGHVPLHRALH
Ga0137420_115626933300015054Vadose Zone SoilMLTEAALRIIGLVVAISAGAWAALLALAEEAAVGEALHTLGDAPPIAAERRVPLHRALHVARLA
Ga0137420_148330913300015054Vadose Zone SoilVTLTGAALTLGGALVGAGAALWAGLLALGEEAAVGEALHTLGDAPPTTVGARVPLHRALHVGRLLALLVLGAVAA
Ga0134089_1016571413300015358Grasslands SoilMTFGAEALSWLGVAAAIVAVVWAGLLALGEEAAVGEMLHTLGDAPPTAVRGRVPLHRALHVARLALL
Ga0134085_1016291433300015359Grasslands SoilMLTEAALRLIGLVVAISAGVWAALLALAEEAAVGEALHTLGDAPPVVEERRVPLHRALHVARLALLVLGAVA
Ga0132255_10059338113300015374Arabidopsis RhizosphereMFTGTALPIIGLLVAVGAGVWAALLALAEEAAVGEALHTLGDAPPIAAERRVPL
Ga0134069_105616833300017654Grasslands SoilMPAETVLRLAGLVAALVGAVWAALLALAEEAAVGEALHTLGDAPPVSAGSRVPLHRALHVARLGLLVLGAVA
Ga0187824_1006127633300017927Freshwater SedimentVIVLAWGGALLALAAAVWAGLLALGEEAAVGETLHTLGDAPPATIWGKVPLNRALHVARL
Ga0184610_127728323300017997Groundwater SedimentMLTETALRVAGLVVALLGAVWAALLALAEEAAVGEALHTLGDAPPASAGS
Ga0184623_1009491713300018056Groundwater SedimentVTALMWGGALLGVLAAVWAGLLALGEEAAVGDALHTLGDAPPTTVSGRVPLHRALHVARLALLV
Ga0184636_118489813300018068Groundwater SedimentMPTETALRVAGLVVALLGAVWAALLALAEEAAVGEALHTLGDAPPASAGS
Ga0184640_1031206613300018074Groundwater SedimentMALAWGGALFAMLAAVWAGLLALGEEAAVGEALHTLGDAPPATIGGQVPLHRGLHVARLA
Ga0184612_1014488313300018078Groundwater SedimentMLTETALRVAGLVVALLGAAWAALLALAEEAAVGEALHTLGDAPPVSAGSRV
Ga0066655_1022163513300018431Grasslands SoilMLTETALRVIGLVVAISAGVWAALLALGEEAAVGEALHTLGDAPPALAERRVPLHRALYI
Ga0066667_1178834613300018433Grasslands SoilMLTEAALRLIGLVVAISAGVWAALLALAEEAAVGEALHTLGDAPPVVEERRVPLHRALHVARLPLLV
Ga0066662_1125418613300018468Grasslands SoilMLTEAALRLIGLVVAVSAGVWAALLALAEEAAVGEALHTLGDAPPIAAERRVPLHRALHVARLALLVLG
Ga0210378_1005560013300021073Groundwater SedimentMLTETALRVASLVVALLGAVWAALLALAEEAAVGEALHTLGDAPPASAGSRVPLH
Ga0210382_1030931513300021080Groundwater SedimentMLTEAALRLIGLLVAISAGVWAALLALAEEAAVGEALHTLGDAPPIAAERRVP
Ga0222622_1108387913300022756Groundwater SedimentMLTEAALRIIGLVVAISAGAWAALLALAEEAAVGEALHTLGDAPPIAAERRVPLHR
Ga0209619_1064230423300025159SoilMPGEAALRVVGLVVALLAAVWAALLALAEEAAVGEALHTLGDAPPASAGGRVPLHR
Ga0209642_1042226623300025167SoilMLSDAALRLIALVVAVVASVWAALLALAEEAAVGEALHTLGDAPPVSAGSRVPLHRALHI
Ga0209324_1074938423300025174SoilVLTATALYFTGVLIAATTVLWAALLALGEEAAVGEARHTLGDAPPATVGGQVPLHRVLYVARLALLVLGAVAA
Ga0209751_1021959633300025327SoilMLVETALRFTGLIAALVAAVWAALLALAEEAAVGEALHTLGDAPPASARSRVPLHRAMHVAR
Ga0207707_1049357533300025912Corn RhizosphereMFTGTALPIIGLLVAVGAGVWAALLALAEEAAMGEALHTLGDAPPIAAERRVPLHRAL
Ga0209237_107792833300026297Grasslands SoilMLTEAALRLIGLAVAISAGVWAALLALGEEAAVGEALHTLGDAPPIAAERRVPLHRALHVAR
Ga0209236_119732613300026298Grasslands SoilMLGSTALLLGGALAALGAGLWAGLLALAEEAAVGEALHTLGDAPPRTVGGRVPLHRALHVSRLALLVLGAVGASRALVWWQQ
Ga0209469_105735833300026307SoilMTLTVAALTLGGALVAGTAALWAGLLALGEEAAVGEALHTLGDAPPPTVGARVPLHRALH
Ga0209239_126995023300026310Grasslands SoilMLGSTALLLGGALVALGAGLWAGLLALAEEAAVGEALHTLGDAPPRTVGGRVPLHRALHVSRLSLLVLGA
Ga0209239_130150913300026310Grasslands SoilMLGSTALLLGGALAALGAGLWAGLLALAEEAAVGEALHTLGDAPPRTVGGRVPLHRALHVSRLALLVLGAVGASRALVWWQQP
Ga0209239_130831013300026310Grasslands SoilMLNEAAVRLIELVFALVTAVWAALLALGEEAAVGEALHTLGDAPPVAAERRVPLHRALHVARLALLVL
Ga0209761_118030233300026313Grasslands SoilMLTEAALRVIGLVVAISAGVWAALVALGEEAAVGEALHTLGDAPPVAAERRVPLHRALHIARLALLVL
Ga0209131_111870413300026320Grasslands SoilMLTEAALQLIGLVVAISAGVWAALLALGEEAAVGEALHTLGDAPPIAAERRVPLHRALHIARLALLVLGAVA
Ga0209152_1026481123300026325SoilVTLTGAALTLGGALVAGAAALWAGLLALGEEAAVGEALHTLGDAPPTTVGARVPLHRALHVARLALLVLGAV
Ga0209801_101418113300026326SoilVTLTGAALTLGGALVAGTAALWAGLLALGEEAAVGEALHTLGDAPPMTVGARVPLHRALHVGRLALLVLGAVAAGHALDWWDRPWA
Ga0209804_117165433300026335SoilMLTEAALRLIGLVVAVSAGAWAALLALAEEAAVGEALHTLGDAPPIAAERRVPLHRALHV
Ga0209806_116724633300026529SoilMLTEAALRVTGLVVAIVAVVWAALLALAEEAAVGEALHTLGDAPPIAAERRVPLHRA
Ga0209807_105982113300026530SoilVTLTGAALTLGGALVAGTAALWAGLLALGEEAAVGEALHTLGDAPPMTVGARVPLHRALHVG
Ga0209157_102701643300026537SoilMLTEAALRLIGLVVAVSAGVWAALLALAEEAAVGEALHTLGDAPPIAAERRVPL
Ga0209056_1010653013300026538SoilMRLGEALLTWFGVVAAVAAVLWAGLLALGEEAAVGEALHTLGDAPPAAARGRVPLHRALYVARLA
Ga0208454_100949733300027573SoilMLTESALRILGLVVAVGAGVWAALLALAEEAAVGEALHTLGDAPPIAAERRAPLHRALHVARLALLIFGA
Ga0209178_104370213300027725Agricultural SoilVTLTATALTLGGALVAGVAALWAALLALGEEAAVGEALHTLGDAPTTVGGRAPRHRGLYV
Ga0209488_1027371513300027903Vadose Zone SoilMLTEAALRIIGLVVAISAGTWAALLALAEEAAVGEALHTLGDAPPIAAERRVPLHRALHV
Ga0137415_1142285023300028536Vadose Zone SoilMLTEAALRLIGLVVAISAGVWAALLALGEEAAVGEALHTLGDAPPIAAERRVPLHRAL
Ga0307495_1004681733300031199SoilMITEAALRLIGLVVALSAGVWAALLALAEEAAVGEALHTLGDAPPMAAERRVPLHRALHVARLAL
Ga0310886_1085678913300031562SoilMLSATAVQLGGAILALGAALWAALLALGEEVAVGEALHTLGDAPPAAPGARVPLHRALHVARLAMLVLGA
Ga0307473_1001737543300031820Hardwood Forest SoilMLTEAALRLIGLVVGISSGVWAALLTLGEEAAVGEALHTLGDAPPIAAERRVPLHRALHIARLALL
Ga0307472_10005325413300032205Hardwood Forest SoilMLTEAALRLIGLVVGISAGVWAALLTLGEEAAVGEALHTLGDAPPIAAERRVPLHRALH
Ga0307472_10187038323300032205Hardwood Forest SoilVIVLAWGGALLALAAAVWAGLLALGEEAAVGETLHTLGDAPPATSWGKVPLKRALHVARLALLVLGAV
Ga0307472_10195412623300032205Hardwood Forest SoilVIVLAWGGALLALAAAVWAGLLALGEEAAVGETLHTLGDEPPETIWGKVPLNRALHVARLALLVLGAVAAAH
Ga0310812_1037372413300032421SoilMLTEAALRLVSLLVAIGAGLWAALLALGEEAAIGEALHTLGDAPPIAAERRVPLHRALHI
Ga0335083_1047632013300032954SoilMMGASALTFAGALFTFAAALWAGLLALGEEAAVGEALHTLGDAPPATIGARVPLHRALHVGRLALLVLGAV
Ga0314864_0065638_1_2073300033805PeatlandMIALTWGGALIALAAAVWAGLLALGEEAAIGEAMHTLGDAPPVAISGEVPLHRALHVARLALLVLGAVA
Ga0364928_0113664_2_1963300033813SedimentMLTEAALRLIGLVVAIGAGVWAALLALGEEAAVGEALHTLGDAPPVAAERRVPLHRALHVARLAL
Ga0364940_0216113_370_5613300034164SedimentMALAWGGALFAMLAALWAGLLALGEEAAVGEAMHTLGDAPPATVGGRVPLHRGLHVARLALLVL

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Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
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