Metagenome / Metatranscriptome Family F062647

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F062647
Family Type	Metagenome / Metatranscriptome
Number of Sequences	130
Average Sequence Length	47 residues
Representative Sequence	MDLDLERIAFGSVVGVTGAAVAAGAGRERNQQINLGEKFDEIARPSGA
Number of Associated Samples	87
Number of Associated Scaffolds	130

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	16.92 %
% of genes near scaffold ends (potentially truncated)	93.85 %
% of genes from short scaffolds (< 2000 bps)	95.38 %
Associated GOLD sequencing projects	81
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.25

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (74.615 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (40.769 % of family members)
Environment Ontology (ENVO)	Unclassified (65.385 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (57.692 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 38.16% β-sheet: 0.00% Coil/Unstructured: 61.84%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.25
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.25
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 130 Family Scaffolds
PF00248	Aldo_ket_red	11.54
PF02738	MoCoBD_1	6.15
PF00486	Trans_reg_C	1.54
PF01554	MatE	1.54
PF02518	HATPase_c	1.54
PF13442	Cytochrome_CBB3	1.54
PF11994	DUF3489	1.54
PF00106	adh_short	0.77
PF03976	PPK2	0.77
PF08238	Sel1	0.77
PF08028	Acyl-CoA_dh_2	0.77
PF01145	Band_7	0.77
PF00034	Cytochrom_C	0.77
PF00155	Aminotran_1_2	0.77
PF01522	Polysacc_deac_1	0.77
PF01609	DDE_Tnp_1	0.77
PF13360	PQQ_2	0.77
PF02743	dCache_1	0.77
PF03992	ABM	0.77
PF00005	ABC_tran	0.77
PF02776	TPP_enzyme_N	0.77
PF02417	Chromate_transp	0.77
PF04909	Amidohydro_2	0.77
PF01053	Cys_Met_Meta_PP	0.77
PF13751	DDE_Tnp_1_6	0.77
PF00171	Aldedh	0.77
PF07366	SnoaL	0.77
PF03466	LysR_substrate	0.77
PF12833	HTH_18	0.77
PF13495	Phage_int_SAM_4	0.77

COG ID	Name	Functional Category	% Frequency in 130 Family Scaffolds
COG0014	Gamma-glutamyl phosphate reductase	Amino acid transport and metabolism [E]	0.77
COG0075	Archaeal aspartate aminotransferase or a related aminotransferase, includes purine catabolism protein PucG	Amino acid transport and metabolism [E]	0.77
COG0156	7-keto-8-aminopelargonate synthetase or related enzyme	Coenzyme transport and metabolism [H]	0.77
COG0399	dTDP-4-amino-4,6-dideoxygalactose transaminase	Cell wall/membrane/envelope biogenesis [M]	0.77
COG0436	Aspartate/methionine/tyrosine aminotransferase	Amino acid transport and metabolism [E]	0.77
COG0520	Selenocysteine lyase/Cysteine desulfurase	Amino acid transport and metabolism [E]	0.77
COG0626	Cystathionine beta-lyase/cystathionine gamma-synthase	Amino acid transport and metabolism [E]	0.77
COG0726	Peptidoglycan/xylan/chitin deacetylase, PgdA/NodB/CDA1 family	Cell wall/membrane/envelope biogenesis [M]	0.77
COG1012	Acyl-CoA reductase or other NAD-dependent aldehyde dehydrogenase	Lipid transport and metabolism [I]	0.77
COG1921	Seryl-tRNA(Sec) selenium transferase	Translation, ribosomal structure and biogenesis [J]	0.77
COG1960	Acyl-CoA dehydrogenase related to the alkylation response protein AidB	Lipid transport and metabolism [I]	0.77
COG1982	Arginine/lysine/ornithine decarboxylase	Amino acid transport and metabolism [E]	0.77
COG2008	Threonine aldolase	Amino acid transport and metabolism [E]	0.77
COG2059	Chromate transport protein ChrA	Inorganic ion transport and metabolism [P]	0.77
COG2326	Polyphosphate kinase 2, PPK2 family	Energy production and conversion [C]	0.77
COG2873	O-acetylhomoserine/O-acetylserine sulfhydrylase, pyridoxal phosphate-dependent	Amino acid transport and metabolism [E]	0.77
COG2972	Sensor histidine kinase YesM	Signal transduction mechanisms [T]	0.77
COG3039	Transposase and inactivated derivatives, IS5 family	Mobilome: prophages, transposons [X]	0.77
COG3293	Transposase	Mobilome: prophages, transposons [X]	0.77
COG3385	IS4 transposase InsG	Mobilome: prophages, transposons [X]	0.77
COG4100	Cystathionine beta-lyase family protein involved in aluminum resistance	Inorganic ion transport and metabolism [P]	0.77
COG4230	Delta 1-pyrroline-5-carboxylate dehydrogenase	Amino acid transport and metabolism [E]	0.77
COG5421	Transposase	Mobilome: prophages, transposons [X]	0.77
COG5433	Predicted transposase YbfD/YdcC associated with H repeats	Mobilome: prophages, transposons [X]	0.77
COG5659	SRSO17 transposase	Mobilome: prophages, transposons [X]	0.77

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	87.69 %
Unclassified	root	N/A	12.31 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	87.69 %
Unclassified	root	N/A	12.31 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	74.62 %
Eukaryota	superkingdom	All Organisms → cellular organisms → Eukaryota	13.08 %
Unclassified	root	N/A	12.31 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	63.08 %
Viridiplantae	kingdom	All Organisms → cellular organisms → Eukaryota → Viridiplantae	13.08 %
Unclassified	root	N/A	12.31 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	58.46 %
Chlorophyta	phylum	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Chlorophyta	13.08 %
Unclassified	root	N/A	12.31 %

Name	Rank	Taxonomy	Distribution
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	41.54 %
Ulvophyceae	class	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Chlorophyta → Ulvophyceae	13.08 %
Unclassified	root	N/A	12.31 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	2.31 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.77 %

Name	Rank	Taxonomy	Distribution
Hyphomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	38.46 %
TCBD clade	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Chlorophyta → Ulvophyceae → TCBD clade	13.08 %
Unclassified	root	N/A	12.31 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2.31 %
Rhodospirillaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae	0.77 %
unclassified Hyphomicrobiales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales	0.77 %

Name	Rank	Taxonomy	Distribution
unclassified Hyphomicrobiaceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae	38.46 %
Bryopsidales	order	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Chlorophyta → Ulvophyceae → TCBD clade → Bryopsidales	13.08 %
Unclassified	root	N/A	12.31 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2.31 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	0.77 %
Inquilinus	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → Inquilinus	0.77 %

Name	Rank	Taxonomy	Distribution
Hyphomicrobiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	38.46 %
Ostreobineae	suborder	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Chlorophyta → Ulvophyceae → TCBD clade → Bryopsidales → Ostreobineae	13.08 %
Unclassified	root	N/A	12.31 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2.31 %
unclassified Inquilinus	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → Inquilinus → unclassified Inquilinus	0.77 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	0.77 %

Name	Rank	Taxonomy	Distribution
Hyphomicrobiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	38.46 %
Ostreobiaceae	family	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Chlorophyta → Ulvophyceae → TCBD clade → Bryopsidales → Ostreobineae → Ostreobiaceae	13.08 %
Unclassified	root	N/A	12.31 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2.31 %
Inquilinus sp. Marseille-Q2685	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → Inquilinus → unclassified Inquilinus → Inquilinus sp. Marseille-Q2685	0.77 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	0.77 %

Name	Rank	Taxonomy	Distribution
Hyphomicrobiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	38.46 %
Ostreobium	genus	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Chlorophyta → Ulvophyceae → TCBD clade → Bryopsidales → Ostreobineae → Ostreobiaceae → Ostreobium	13.08 %
Unclassified	root	N/A	12.31 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2.31 %
Inquilinus sp. Marseille-Q2685	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → Inquilinus → unclassified Inquilinus → Inquilinus sp. Marseille-Q2685	0.77 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	0.77 %

Name	Rank	Taxonomy	Distribution
Hyphomicrobiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	38.46 %
Ostreobium quekettii	species	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Chlorophyta → Ulvophyceae → TCBD clade → Bryopsidales → Ostreobineae → Ostreobiaceae → Ostreobium → Ostreobium quekettii	13.08 %
Unclassified	root	N/A	12.31 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2.31 %
Inquilinus sp. Marseille-Q2685	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → Inquilinus → unclassified Inquilinus → Inquilinus sp. Marseille-Q2685	0.77 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	0.77 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300004091\|Ga0062387_101794070	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Chlorophyta → Ulvophyceae → TCBD clade → Bryopsidales → Ostreobineae → Ostreobiaceae → Ostreobium → Ostreobium quekettii	501	Open in IMG/M
3300004092\|Ga0062389_104972308	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Chlorophyta → Ulvophyceae → TCBD clade → Bryopsidales → Ostreobineae → Ostreobiaceae → Ostreobium → Ostreobium quekettii	501	Open in IMG/M
3300004153\|Ga0063455_101361853	All Organisms → cellular organisms → Bacteria	545	Open in IMG/M
3300005171\|Ga0066677_10750305	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	543	Open in IMG/M
3300005332\|Ga0066388_101038975	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1378	Open in IMG/M
3300005332\|Ga0066388_106626117	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	584	Open in IMG/M
3300005437\|Ga0070710_10156827	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	1408	Open in IMG/M
3300005439\|Ga0070711_102055860	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	503	Open in IMG/M
3300005566\|Ga0066693_10249981	All Organisms → cellular organisms → Bacteria	702	Open in IMG/M
3300005610\|Ga0070763_10612996	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	632	Open in IMG/M
3300005764\|Ga0066903_106858154	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	591	Open in IMG/M
3300005764\|Ga0066903_108362357	Not Available	528	Open in IMG/M
3300006755\|Ga0079222_11563739	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	623	Open in IMG/M
3300007788\|Ga0099795_10406919	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	619	Open in IMG/M
3300009012\|Ga0066710_101668754	All Organisms → cellular organisms → Bacteria → Proteobacteria	972	Open in IMG/M
3300010046\|Ga0126384_12440367	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	507	Open in IMG/M
3300010343\|Ga0074044_10246056	Not Available	1181	Open in IMG/M
3300010359\|Ga0126376_12662350	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Chlorophyta → Ulvophyceae → TCBD clade → Bryopsidales → Ostreobineae → Ostreobiaceae → Ostreobium → Ostreobium quekettii	549	Open in IMG/M
3300010360\|Ga0126372_11712316	Not Available	670	Open in IMG/M
3300010361\|Ga0126378_11186316	All Organisms → cellular organisms → Bacteria	862	Open in IMG/M
3300010362\|Ga0126377_12203312	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	627	Open in IMG/M
3300010376\|Ga0126381_102353623	Not Available	765	Open in IMG/M
3300010376\|Ga0126381_102541301	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	733	Open in IMG/M
3300010376\|Ga0126381_104681904	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	527	Open in IMG/M
3300010376\|Ga0126381_105019275	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	507	Open in IMG/M
3300012361\|Ga0137360_10394409	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1165	Open in IMG/M
3300012918\|Ga0137396_11206853	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Chlorophyta → Ulvophyceae → TCBD clade → Bryopsidales → Ostreobineae → Ostreobiaceae → Ostreobium → Ostreobium quekettii	533	Open in IMG/M
3300012922\|Ga0137394_11591395	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	510	Open in IMG/M
3300012971\|Ga0126369_10207874	Not Available	1893	Open in IMG/M
3300012971\|Ga0126369_12222556	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Chlorophyta → Ulvophyceae → TCBD clade → Bryopsidales → Ostreobineae → Ostreobiaceae → Ostreobium → Ostreobium quekettii	636	Open in IMG/M
3300012971\|Ga0126369_12740211	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	577	Open in IMG/M
3300016270\|Ga0182036_10109555	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1894	Open in IMG/M
3300016270\|Ga0182036_10126990	All Organisms → cellular organisms → Bacteria	1780	Open in IMG/M
3300016294\|Ga0182041_10025330	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3708	Open in IMG/M
3300016341\|Ga0182035_10400230	All Organisms → cellular organisms → Bacteria → Proteobacteria	1153	Open in IMG/M
3300016341\|Ga0182035_10478562	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	1060	Open in IMG/M
3300016357\|Ga0182032_10177610	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1601	Open in IMG/M
3300016357\|Ga0182032_11630398	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Chlorophyta → Ulvophyceae → TCBD clade → Bryopsidales → Ostreobineae → Ostreobiaceae → Ostreobium → Ostreobium quekettii	562	Open in IMG/M
3300016371\|Ga0182034_10005549	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	6714	Open in IMG/M
3300016371\|Ga0182034_10589744	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	937	Open in IMG/M
3300016404\|Ga0182037_11457189	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	606	Open in IMG/M
3300016445\|Ga0182038_10262552	All Organisms → cellular organisms → Bacteria → Proteobacteria	1394	Open in IMG/M
3300016445\|Ga0182038_11172550	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Chlorophyta → Ulvophyceae → TCBD clade → Bryopsidales → Ostreobineae → Ostreobiaceae → Ostreobium → Ostreobium quekettii	684	Open in IMG/M
3300018431\|Ga0066655_10805953	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	639	Open in IMG/M
3300020580\|Ga0210403_10006471	All Organisms → cellular organisms → Bacteria	9813	Open in IMG/M
3300021168\|Ga0210406_10666080	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	805	Open in IMG/M
3300021168\|Ga0210406_10765910	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	737	Open in IMG/M
3300021171\|Ga0210405_10802030	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	721	Open in IMG/M
3300021401\|Ga0210393_11569875	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Chlorophyta → Ulvophyceae → TCBD clade → Bryopsidales → Ostreobineae → Ostreobiaceae → Ostreobium → Ostreobium quekettii	522	Open in IMG/M
3300021432\|Ga0210384_11401197	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	604	Open in IMG/M
3300021559\|Ga0210409_11104630	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Chlorophyta → Ulvophyceae → TCBD clade → Bryopsidales → Ostreobineae → Ostreobiaceae → Ostreobium → Ostreobium quekettii	668	Open in IMG/M
3300021560\|Ga0126371_13552165	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	526	Open in IMG/M
3300022532\|Ga0242655_10291843	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	528	Open in IMG/M
3300025915\|Ga0207693_10971394	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	650	Open in IMG/M
3300025928\|Ga0207700_11354576	All Organisms → cellular organisms → Bacteria	633	Open in IMG/M
3300027903\|Ga0209488_10295723	All Organisms → cellular organisms → Bacteria	1209	Open in IMG/M
3300031474\|Ga0170818_109520218	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	500	Open in IMG/M
3300031543\|Ga0318516_10291521	All Organisms → cellular organisms → Bacteria → Proteobacteria	943	Open in IMG/M
3300031543\|Ga0318516_10374379	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	821	Open in IMG/M
3300031546\|Ga0318538_10726795	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	539	Open in IMG/M
3300031573\|Ga0310915_11016169	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	578	Open in IMG/M
3300031573\|Ga0310915_11098241	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	553	Open in IMG/M
3300031713\|Ga0318496_10844367	Not Available	505	Open in IMG/M
3300031719\|Ga0306917_10493206	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	961	Open in IMG/M
3300031719\|Ga0306917_10882044	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Chlorophyta → Ulvophyceae → TCBD clade → Bryopsidales → Ostreobineae → Ostreobiaceae → Ostreobium → Ostreobium quekettii	700	Open in IMG/M
3300031719\|Ga0306917_11205826	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	587	Open in IMG/M
3300031724\|Ga0318500_10727369	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	507	Open in IMG/M
3300031736\|Ga0318501_10326962	Not Available	821	Open in IMG/M
3300031744\|Ga0306918_10281571	Not Available	1276	Open in IMG/M
3300031744\|Ga0306918_10376036	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → Inquilinus → unclassified Inquilinus → Inquilinus sp. Marseille-Q2685	1105	Open in IMG/M
3300031744\|Ga0306918_10935633	Not Available	674	Open in IMG/M
3300031744\|Ga0306918_10958216	Not Available	665	Open in IMG/M
3300031744\|Ga0306918_11326480	Not Available	553	Open in IMG/M
3300031744\|Ga0306918_11474035	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	520	Open in IMG/M
3300031748\|Ga0318492_10434627	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	692	Open in IMG/M
3300031751\|Ga0318494_10790927	All Organisms → cellular organisms → Bacteria	556	Open in IMG/M
3300031764\|Ga0318535_10229991	All Organisms → cellular organisms → Bacteria	830	Open in IMG/M
3300031768\|Ga0318509_10630488	All Organisms → cellular organisms → Bacteria	597	Open in IMG/M
3300031768\|Ga0318509_10861964	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	500	Open in IMG/M
3300031770\|Ga0318521_10183374	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	1202	Open in IMG/M
3300031782\|Ga0318552_10693246	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	519	Open in IMG/M
3300031793\|Ga0318548_10675172	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	501	Open in IMG/M
3300031796\|Ga0318576_10322640	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	729	Open in IMG/M
3300031797\|Ga0318550_10501763	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	585	Open in IMG/M
3300031819\|Ga0318568_11010111	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	514	Open in IMG/M
3300031833\|Ga0310917_10418253	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	911	Open in IMG/M
3300031833\|Ga0310917_11180161	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	509	Open in IMG/M
3300031835\|Ga0318517_10205937	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Chlorophyta → Ulvophyceae → TCBD clade → Bryopsidales → Ostreobineae → Ostreobiaceae → Ostreobium → Ostreobium quekettii	886	Open in IMG/M
3300031845\|Ga0318511_10409723	All Organisms → cellular organisms → Bacteria	622	Open in IMG/M
3300031846\|Ga0318512_10744741	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Chlorophyta → Ulvophyceae → TCBD clade → Bryopsidales → Ostreobineae → Ostreobiaceae → Ostreobium → Ostreobium quekettii	504	Open in IMG/M
3300031860\|Ga0318495_10534147	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	510	Open in IMG/M
3300031879\|Ga0306919_10049022	Not Available	2785	Open in IMG/M
3300031890\|Ga0306925_10411559	All Organisms → cellular organisms → Bacteria	1448	Open in IMG/M
3300031890\|Ga0306925_10873990	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	927	Open in IMG/M
3300031890\|Ga0306925_11696643	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	610	Open in IMG/M
3300031893\|Ga0318536_10493044	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	616	Open in IMG/M
3300031910\|Ga0306923_10424734	All Organisms → cellular organisms → Bacteria	1510	Open in IMG/M
3300031910\|Ga0306923_10579641	Not Available	1261	Open in IMG/M
3300031910\|Ga0306923_11135365	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	839	Open in IMG/M
3300031912\|Ga0306921_10246678	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2092	Open in IMG/M
3300031912\|Ga0306921_10558360	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	1327	Open in IMG/M
3300031912\|Ga0306921_11734271	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	674	Open in IMG/M
3300031941\|Ga0310912_10708250	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	780	Open in IMG/M
3300031942\|Ga0310916_10742016	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	829	Open in IMG/M
3300031945\|Ga0310913_11194691	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	529	Open in IMG/M
3300031946\|Ga0310910_10745554	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	773	Open in IMG/M
3300031946\|Ga0310910_10804167	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	740	Open in IMG/M
3300031946\|Ga0310910_11187577	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Chlorophyta → Ulvophyceae → TCBD clade → Bryopsidales → Ostreobineae → Ostreobiaceae → Ostreobium → Ostreobium quekettii	592	Open in IMG/M
3300031946\|Ga0310910_11344991	Not Available	551	Open in IMG/M
3300031947\|Ga0310909_10299449	All Organisms → cellular organisms → Bacteria → Proteobacteria	1347	Open in IMG/M
3300031947\|Ga0310909_10361050	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	1219	Open in IMG/M
3300031959\|Ga0318530_10450592	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	534	Open in IMG/M
3300032001\|Ga0306922_11556851	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	659	Open in IMG/M
3300032001\|Ga0306922_12188606	Not Available	533	Open in IMG/M
3300032010\|Ga0318569_10414860	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Chlorophyta → Ulvophyceae → TCBD clade → Bryopsidales → Ostreobineae → Ostreobiaceae → Ostreobium → Ostreobium quekettii	628	Open in IMG/M
3300032035\|Ga0310911_10130872	All Organisms → cellular organisms → Bacteria → Proteobacteria	1400	Open in IMG/M
3300032035\|Ga0310911_10345874	All Organisms → cellular organisms → Bacteria	858	Open in IMG/M
3300032051\|Ga0318532_10370517	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	508	Open in IMG/M
3300032059\|Ga0318533_10771620	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	705	Open in IMG/M
3300032068\|Ga0318553_10265711	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	896	Open in IMG/M
3300032076\|Ga0306924_10272114	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Chlorophyta → Ulvophyceae → TCBD clade → Bryopsidales → Ostreobineae → Ostreobiaceae → Ostreobium → Ostreobium quekettii	1945	Open in IMG/M
3300032076\|Ga0306924_10304990	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Chlorophyta → Ulvophyceae → TCBD clade → Bryopsidales → Ostreobineae → Ostreobiaceae → Ostreobium → Ostreobium quekettii	1827	Open in IMG/M
3300032076\|Ga0306924_11291539	Not Available	784	Open in IMG/M
3300032076\|Ga0306924_11721618	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	656	Open in IMG/M
3300032076\|Ga0306924_11747217	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Chlorophyta → Ulvophyceae → TCBD clade → Bryopsidales → Ostreobineae → Ostreobiaceae → Ostreobium → Ostreobium quekettii	650	Open in IMG/M
3300032261\|Ga0306920_100100171	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	4289	Open in IMG/M
3300032261\|Ga0306920_104071866	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	529	Open in IMG/M
3300033289\|Ga0310914_10621443	All Organisms → cellular organisms → Bacteria	973	Open in IMG/M
3300033289\|Ga0310914_11257447	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	642	Open in IMG/M
3300033289\|Ga0310914_11642215	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	546	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	98.46%
Aquatic	Environmental → Aquatic	1.54%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	98.46%
Freshwater	Environmental → Aquatic → Freshwater	1.54%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	89.23%
Loam	Environmental → Terrestrial → Soil → Loam	8.46%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	1.54%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.77%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	72.31%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	13.85%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	3.85%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	3.08%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	2.31%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	1.54%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	1.54%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.77%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.77%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	40.77%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	30.77%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	10.00%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	3.85%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	3.08%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.08%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	1.54%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.54%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	1.54%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.77%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.77%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.77%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	0.77%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	0.77%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300004091	Coassembly of ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004153	Grasslands soil microbial communities from Hopland, California, USA (version 2)	Environmental	Open in IMG/M
3300005171	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005566	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_142	Environmental	Open in IMG/M
3300005610	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300007788	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010343	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM1	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012918	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300018431	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021401	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300022532	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-4-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300027903	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)	Environmental	Open in IMG/M
3300031474	Fir Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031546	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031713	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f22	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031724	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f20	Environmental	Open in IMG/M
3300031736	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f21	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031748	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f22	Environmental	Open in IMG/M
3300031751	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f24	Environmental	Open in IMG/M
3300031764	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f27	Environmental	Open in IMG/M
3300031768	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f22	Environmental	Open in IMG/M
3300031770	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17	Environmental	Open in IMG/M
3300031782	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f20	Environmental	Open in IMG/M
3300031793	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f21	Environmental	Open in IMG/M
3300031796	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f24	Environmental	Open in IMG/M
3300031797	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f23	Environmental	Open in IMG/M
3300031819	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f21	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031835	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f21	Environmental	Open in IMG/M
3300031845	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f18	Environmental	Open in IMG/M
3300031846	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f19	Environmental	Open in IMG/M
3300031860	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f25	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031893	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f28	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300031959	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f24	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032010	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f22	Environmental	Open in IMG/M
3300032035	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF170	Environmental	Open in IMG/M
3300032051	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f26	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032068	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f21	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0062387_1017940701	3300004091	Bog Forest Soil	MDLDFERIAFGTVIGVTGATVAPATGRKRNQQINLAEKFDEIARPNGACFHEVLM
Ga0062389_1049723081	3300004092	Bog Forest Soil	MDLDFERIAFGTVIGVTGATVAPGTGRKRNQQINLAEKFDEIARPNGACFHEVLM
Ga0063455_1013618532	3300004153	Soil	MDLDLERIAFGSVVGVTGATVAAGTGRERNQQIDLGKKFNE
Ga0066677_107503052	3300005171	Soil	LPASQRAFARPIDLDLERIAFGTVVGVSGATVAPGTCRERNHKINFGKKFDEIAGPN
Ga0066388_1010389751	3300005332	Tropical Forest Soil	MDLDLERIAFGNVVGVAGAAVAARTSREPNQQIDLGKKFDEIAGPN
Ga0066388_1066261171	3300005332	Tropical Forest Soil	MDLDLERVALGTVVGVTGATIAPRTGRERSQKINFGKKFDEIAGPNGACFHEVLMRV
Ga0070710_101568271	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	MDLDVERIAFGSVVGVTGAAVAAGTGRERNQQVNLGKKFDEIAGPDGA
Ga0070711_1020558601	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	MDLDLKRIAFGSVVGVIGAAVTAGAGRKRNQQVNLGEKFDEIAGPNGACFHEVLM
Ga0066693_102499812	3300005566	Soil	MDLNLERKAFGSVVGVTGAAVAAGAGRKRNQQIDLGEEF
Ga0070763_106129961	3300005610	Soil	MDLDLERIAFGSVVGVTGTAVAAGAGGERNQQVNLGEKFDEIAGPNGACFHEVLMR
Ga0066903_1068581541	3300005764	Tropical Forest Soil	MDLDLQRIAFGSVVGVTGAAVAAGTGRERDQQINLGKKF
Ga0066903_1083623571	3300005764	Tropical Forest Soil	MNLDLERITLGNVVGVTGATVAAGTGRERNQQINLGEKFDEIAGPHGACFHEV
Ga0079222_115637391	3300006755	Agricultural Soil	MDLDLERIAFGSVVGVTGAAVAAGAGRERNQQINLGEKFDEIAGPNRACFH
Ga0099795_104069191	3300007788	Vadose Zone Soil	MDLDLERVAFGTIVGVTGAAVAAGAGRERNQQINLGEKFDEIAGPNR
Ga0066710_1016687542	3300009012	Grasslands Soil	MDLDLERIAFGTVVGVTGATVAPGTCRDRDQKINFGKKFDEIAGPN
Ga0126384_124403671	3300010046	Tropical Forest Soil	MDLDVERIALGNVVGVTAATVAAGTGRECNQQINLGEKFDEIAGPN
Ga0074044_102460562	3300010343	Bog Forest Soil	MELDLERIAFSSVVGVTGATVAAGAARERNQQINLGEKFDEIARANGT
Ga0126376_126623502	3300010359	Tropical Forest Soil	MNLELEWIAFGTVVGVTGAAVAPGTGGECKQQINLCEKFDEIAGPNGACFHEV
Ga0126372_117123161	3300010360	Tropical Forest Soil	MDLDLDRIAFGSVVGVTGAAVAAGTGRERNQQINLGEK
Ga0126378_111863161	3300010361	Tropical Forest Soil	MDLDLERIALGTVVGVTGATVAPGTSRKRDQKINFGKK
Ga0126377_122033122	3300010362	Tropical Forest Soil	MDLDLQRIAFGSVVGVTGGAVAAGTGRERDQQINLSKKFDEIAGRTGLAFMKY*
Ga0126381_1023536232	3300010376	Tropical Forest Soil	MDLDLERIALGNVVGVTGATVAAGTGRERIQQINLGKKI*
Ga0126381_1025413011	3300010376	Tropical Forest Soil	MELDFERTAFGSVVGVTGATVTARTGRERNQQIDLGEKFDKIAGPHRACFHEILMR
Ga0126381_1046819042	3300010376	Tropical Forest Soil	MDLDLERIAFGSVAGVTGAAIAAGTGRECNQQINLGKKFDEIAGPNGAGFHGP
Ga0126381_1050192751	3300010376	Tropical Forest Soil	MDLYLERIAFRSVVGVTGAAVAAGAGREPNQQINLGEKFDKIAGPNG
Ga0137360_103944091	3300012361	Vadose Zone Soil	MDLDLERIAFGSVVGVTGAAVAAGAGRERNQQINLGEKFDEIARPSGA
Ga0137396_112068531	3300012918	Vadose Zone Soil	MDLDLERIASGSVVGVTGAAVAAGTGRECNQQINLGEKFDEIAG
Ga0137394_115913951	3300012922	Vadose Zone Soil	MDLDLKRIAFGSVVGVTGAAVAAGTGREPNQQINLGEKFDEIARPNGARLHEVLM
Ga0126369_102078742	3300012971	Tropical Forest Soil	MDLDLKRIAFSSVVGVSGAAVAAGAGREPNQQINLGEKFDKIAGPNG
Ga0126369_122225562	3300012971	Tropical Forest Soil	MNLNFERIASSSVVGVTGAAVATRAGRKHNQQINLCEKFDEI
Ga0126369_127402112	3300012971	Tropical Forest Soil	LDLDLERIAFGSVVGVTGAAVAAGASGERSQQINLGEKFDE
Ga0182036_101095551	3300016270	Soil	MDLDLKRIAFGSVVGVTGAAVAAGASGEPNQQINLGEKFDEIAGPNG
Ga0182036_101269904	3300016270	Soil	MDLDLERIAFGNVVGVTGATVAAGTSRERDQQINLGE
Ga0182041_100253304	3300016294	Soil	VDLNLERITFGTLVGVTGATVAPGTGRKRNQQINLGEKFDEIAGP
Ga0182035_104002303	3300016341	Soil	MDLDLERIAFGSVVGVTGATVAARACREPNQQINLGEKFDEVAGPNGACFHEVL
Ga0182035_104785622	3300016341	Soil	MDLDLERIAFGGVVGVTGGTVAAGTDREPNQQINLGEKFDEIAGPNGACFHEVL
Ga0182032_101776103	3300016357	Soil	MDLDLERIAFGGVVGVTGGTVAAGTGREPNQQINLGEKFDEIAGPNGAAFMKY
Ga0182032_116303981	3300016357	Soil	MDLDLERITFGTVVGVTGATVAPGTGRKRNQQINLGEKFDEIAG
Ga0182034_100055497	3300016371	Soil	MDLDHERIALGCVVGVSGAAVAAGTSRERNQQIKLG
Ga0182034_105897441	3300016371	Soil	MDLDLQRIAFGSIVGVTSAAVAAGTGRERDQQINLGKKFDEIAGPNGTCFHEVLMRV
Ga0182037_114571891	3300016404	Soil	MDLDLERIAFGSVVGVTGATVAAGACREPNQQINLGEKFDEVAGPNGACFHEVLM
Ga0182038_102625521	3300016445	Soil	VDLNLERITFGTLVGVTGATVAPGTGRKRNQQINLGEKFDEIAGPNG
Ga0182038_111725501	3300016445	Soil	VDLDLERITFDTVVGVTGATIAPRTGRKRNQQIDL
Ga0066655_108059531	3300018431	Grasslands Soil	MDLDLERIAFGSVVGVTGAAVAAGAGRERNQQINLGEKFDEIARTNGAC
Ga0210403_100064715	3300020580	Soil	MDFDLERIALGSVIGVTGAAVAAGACRERNQQINLGEKLDEIAGPNGLAFMKY
Ga0210406_106660801	3300021168	Soil	MDFDLERIAFGSVVGVTGAAVAAGTGRKRNQQVNLGKKFDEIAGPNRA
Ga0210406_107659101	3300021168	Soil	MDLDLERITFGTVVGVTGATVAPGTGRKRDQQIDLGEKFDEIAGPNGARFHEIL
Ga0210405_108020302	3300021171	Soil	MDLDLERITFGTVVGVTGATVAPGTGRKRDQQIDLGEKFDEIAGPNGARFHE
Ga0210393_115698751	3300021401	Soil	MNLDVERIAFGSVVGVTGAAVAAGTGRERNQQVNLGKKFDEIA
Ga0210384_114011971	3300021432	Soil	MDLDVERIAFGTVVGVTGATVAPGTCRNRDQKINFGKKFD
Ga0210409_111046301	3300021559	Soil	MDLDVERIAFGSVVGVTGAAVAAGTGRERNQQVNLGKKFDEIA
Ga0126371_135521652	3300021560	Tropical Forest Soil	MDLDLERITFGNVVGVAGAAVAARTSREPDQQIDLGKKFDEIAGPNGACFHEVLMRV
Ga0242655_102918432	3300022532	Soil	MDLDLERITFGTVVGVTGATVAPGTGRKRDQQVDLGEKFDEIAGPN
Ga0207693_109713941	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	MDLDLQRIAFGSVVGVTGAAVAAGTGRERDQQINLGKKFDEIAGPNGT
Ga0207700_113545762	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	MDLDLERIALGSVVGVTGTAVAAGTGRESNQQINLGEKFNEIAGPDGACFHEVLM
Ga0209488_102957233	3300027903	Vadose Zone Soil	MDLDVERIAFGSVVGVTGAAVAAGTGRERSQQVNLGKKFDEIAGPN
Ga0170818_1095202181	3300031474	Forest Soil	MDLDLERIAFGSVVGVTGAAVAAGAGRERNQQINLGEKFDEIAGPNGACLHEVLMR
Ga0318516_102915212	3300031543	Soil	MHLNLERIALGSVVRVTGTTITTGTGRERNQQINLGEKFDEIAGPNGARFHEVLMRALSG
Ga0318516_103743791	3300031543	Soil	MDLDLERIAFGIVVGVTGATVAPGAGRERNQQINLSEKFDEIARPNGACFHEVLV
Ga0318538_107267951	3300031546	Soil	MDLDFERIALGSVVGVTGTAVAAGTGRESNQQINLGEK
Ga0310915_110161691	3300031573	Soil	MDLDLERITFGTVVGVTGATIAPRTGRKRNQQIDLGEKFDEIAGPNGARFHE
Ga0310915_110982411	3300031573	Soil	MDPDLERITFGTVVGVTGATVTPGTGRKSNQQIDLGEKFDEIAGPNGARLHEV
Ga0318496_108443671	3300031713	Soil	MDPDLERTALGSVVGVTGATVAPGACREPNQQVNLGEKFDEVARPNGACFM
Ga0306917_104932061	3300031719	Soil	MDLDLERIAFGSVVGVTGATVAAGACREPNQQINLGEKFDEVAGPHGAC
Ga0306917_108820441	3300031719	Soil	MDLDLERIALGTVVGVTGATVAPGTSRERNQKINFGKKFDEIAGPNGACFHEVLM
Ga0306917_112058262	3300031719	Soil	MDLDLERIAFGGIVGVTGGTVAAGTGREPNQQINLGEK
Ga0318500_107273691	3300031724	Soil	MHLNLERIALGSVVRVTGTTITTGTGRERNQQINLGEKFDEITGPNGAGFHEVLMRVM
Ga0318501_103269621	3300031736	Soil	MDLDLERITFGTVVGVTGATVAPGTGRKRNQQINLGEKFDEIAGRTGLDFMKH
Ga0306918_102815711	3300031744	Soil	MDLDLERKTFGTVVGVTGATVAPRTGRKRNQQIDLGEEF
Ga0306918_103760363	3300031744	Soil	MDPDLERITFGAVVGVTGATVTPGTGRKSNQQIDLGEKFDEIAGPNGAR
Ga0306918_109356331	3300031744	Soil	MDLDHERIALGCVVGVSGAAVAAGTSRERNQQINLGKKFDEIAG
Ga0306918_109582161	3300031744	Soil	MDLGLKRIAFSSVVGVTGAAVAAGAGSNQQINLGEKFDEIA
Ga0306918_113264802	3300031744	Soil	MHLNLERIALGSVVRVTGTTITTGTGRERNQQINLGEKF
Ga0306918_114740351	3300031744	Soil	MDLDFERIALGSVVGVTSTAVAAGTGRESNQQINLGEKFDEIAGPDGTCFH
Ga0318492_104346272	3300031748	Soil	MDLGLKRIAFSSVVGVTGAAVAAGAGSNQQINLGEKF
Ga0318494_107909272	3300031751	Soil	MDLDLERIAFGIVVGVTGATVAPGAGRERNLQINL
Ga0318535_102299912	3300031764	Soil	MDLDHERIALGCVVGVSGAAVAAGTSRERNQQIKLGKNSM
Ga0318509_106304882	3300031768	Soil	MDLDLERIAFGIVVGVTGATVAPGAGRERNQQINLSE
Ga0318509_108619641	3300031768	Soil	MHLNLERIALGSVVRVTGTTITTGTGRERNQQINLGEKFDEITGPNGAGFHEVLMRVLR
Ga0318521_101833741	3300031770	Soil	MDLDLKRIAFGSIVGVTGATVAAGTGRECNQQINLGEKFDEIARPNGACFHEVLM
Ga0318552_106932461	3300031782	Soil	MDLDLERIAFGGVVGVSGTTITTGTGRERNQQINLGEKFDEITGPNGARFHEVLM
Ga0318548_106751721	3300031793	Soil	MNLDLERIAFGSVVGVAGAAIAAGTGRERNQQINLGEKFDEIAGPHGACFHEIL
Ga0318576_103226402	3300031796	Soil	MDLDLERIAFGSVVGVTGATVAARACREPNQQINLGEKFDEVAGPNGACF
Ga0318550_105017631	3300031797	Soil	MDLGLKRIAFSSVVGVTGAAVAAGAGSNQQINLGEKFDEIAGANGTCFHKVLM
Ga0318568_110101111	3300031819	Soil	MHLNLERIALGSVVRVTGTTITAGTGRERNQQINLGEKFDEITGPNGARFHEVLVRVACI
Ga0310917_104182532	3300031833	Soil	MDPDLERTALGSVVGVTGATVAPGACREPNQQVNLGEKFDEVAR
Ga0310917_111801612	3300031833	Soil	MDLDLERIAFGSVVGVTGATVAARACREPNQQINLGEKFD
Ga0318517_102059371	3300031835	Soil	MDLDLERITFGTVVGVTGATVAPGTGRKRNQQINLGEKF
Ga0318511_104097231	3300031845	Soil	MDLDLERIAFGIVVGVTGATVAPGAGRERNQQINLSEK
Ga0318512_107447412	3300031846	Soil	MDFDLERIAFGSVVGVTGATVAAGTGRECNQQINLGKKFDEVA
Ga0318495_105341472	3300031860	Soil	MHLNLERIALGSVVRVTGTTITTGTGRERNQQINLGEKFDEIAGPNGARFHEVLMRA
Ga0306919_100490221	3300031879	Soil	MDLDLERITFGTVVGVTGATVTPRTGRNSNQQIDLSE
Ga0306925_104115591	3300031890	Soil	MDLDLERIAFGIVVGVTGATVAPGAGRERNQQIEKF
Ga0306925_108739902	3300031890	Soil	MDLDLERIAFDSVVGVTGAAVAAGAGRERNQQVNLGEEFD
Ga0306925_116966431	3300031890	Soil	MDLDLERIAFGDVIGVTGGTVAARTGRERNQQINLGEKFDEIAGPNGTCFHEVLM
Ga0318536_104930442	3300031893	Soil	MDLDLERITFGTVVGVTGATVPPGTGRKRNQQINLGEKFDEIAGPNGTRFHEILMRVA
Ga0306923_104247341	3300031910	Soil	MDLDLERIAFGIVVGVTGATVAPGAGRERNQQIEK
Ga0306923_105796411	3300031910	Soil	MDLDPERITFGTVVGVTGATVAPGTGRKRDQQVDLGEKFDEIAGP
Ga0306923_111353652	3300031910	Soil	MDLDLERITFGTVVGVTGATVAPGTGRKRNQQINLGEK
Ga0306921_102466781	3300031912	Soil	MDLDLERIAFGIVVGVTGATVAPGAGRERNQQIEKFDEI
Ga0306921_105583601	3300031912	Soil	MDLDLERITFGTVVGVTGATVAPGTGGKSNQQIDLGEKFDEIAGPNGTRFHEVLMR
Ga0306921_117342712	3300031912	Soil	MDLHLERIAFGCIIGVTGATVAAGTGREHNQQINLG
Ga0310912_107082502	3300031941	Soil	MHLNLERIALGSVVRVTGTTITTGTGRERNQQINLGEKFDEITGPNGARFHEVLMRIT
Ga0310916_107420162	3300031942	Soil	MDLDLERIAFGIVVGVTGATVAPGAGRERNQQIEKFDEIAGPNGACFHEVLMR
Ga0310913_111946912	3300031945	Soil	MHLNLERIALGSVVRVTGTTITTGTGRERNQQINLGEKFDEIAGPNGARFH
Ga0310910_107455541	3300031946	Soil	MDLDLERIALGTVVGVTGATVAPGTSRERNQKINFGKKFDEIAGPNGACLHEVLMRV
Ga0310910_108041672	3300031946	Soil	MDLDLERITFGTVVGVTGATIAPRTGRKRNQQIDLGEKFDEIAGPN
Ga0310910_111875771	3300031946	Soil	MDLDLERIALGTVVGVTGATVAPGTSRERNQKINFG
Ga0310910_113449912	3300031946	Soil	MHLNLERIALGSVVRVTGTTITTGTGRERNQQINLGEKFDEI
Ga0310909_102994493	3300031947	Soil	MDLDLERIAFGSVVGVTGATVAAGACREPNQQINLGEKFD
Ga0310909_103610501	3300031947	Soil	MDLDLERIAFGIVVGVTGATVAPGAGRERNQQINLSEKFDEIARPNGACFHEVLVRVARI
Ga0318530_104505922	3300031959	Soil	MDLDFERIALGSVVGVTGTAVAAGTGRESNQQINLGEKFDEIAGPDGTCFHEVLM
Ga0306922_115568512	3300032001	Soil	MDLHLERIAFGCIIGVTGATVAAGTGREHNQQINLGGKFDEIAGSNGACFHKVLMRVA
Ga0306922_121886062	3300032001	Soil	MDLDLERIALGTVVGVTGATIAPRTGRERNQKINFGKKIDEIAGPNGACFH
Ga0318569_104148601	3300032010	Soil	MDLDLERITFGTVVGVTGATVAPGTGRKRNQQIKLGEKFDEIAGRTGLDFMKH
Ga0310911_101308722	3300032035	Soil	MDLDFERIALGSVVGVTGTAVAAGTGRESNQQINLGEKFDEIAGPDGT
Ga0310911_103458741	3300032035	Soil	MDLDLERIAFGIVVGVTGATVAAWTGRERNQQINLG
Ga0318532_103705172	3300032051	Soil	MDLDFERIALGSVVGVTGTAVAAGTGRESNQQINLGEKFDEIAGPDGTCFHKVLMRIARI
Ga0318533_107716202	3300032059	Soil	MDLDLERIAFGSVVGVTGATVAARACREPNQQINLGEKFDEVAG
Ga0318553_102657111	3300032068	Soil	MDLDLERIAFGSVVGVTGATVAAGACREPNQQINLGEKFDEVAGPNGAC
Ga0306924_102721142	3300032076	Soil	MDLDLERIALGTVVGVTGATVAPGTSRERNQKINFGKKFDEIAGPNGA
Ga0306924_103049902	3300032076	Soil	VDLDLERITFDTVVGVTGATIAPRTGRKRNQQIDLGEKFDEIAGP
Ga0306924_112915391	3300032076	Soil	MHLNLERIALGSVVRVTGTTITTGTGRERNQQINLGEKFDEITGPNGAR
Ga0306924_117216182	3300032076	Soil	MDLDFERIALGSVVGVTSTAVAAGTGRESNQQINLGEKFDEIAGPDGTCFHEVLMRI
Ga0306924_117472172	3300032076	Soil	MNLDLERIAFGSVVGVTGAAVAARAGRERNQQINLGEKFDE
Ga0306920_1001001711	3300032261	Soil	MDLDLERIAFGIVVGVTGATVAPGAGRERNQQIEKFDEIAGPNGACFHEVLMRVAR
Ga0306920_1040718661	3300032261	Soil	MDLDLERIAFGSVVGVTRAAVAAGAGRERNQQINLGKKFDEIAGPNRACFHEV
Ga0310914_106214432	3300033289	Soil	MNLDLERIAFGSVVGVAGAAIAAGTGRERNQQINLGEKFDEIAGPHG
Ga0310914_112574472	3300033289	Soil	MDLDLERIALGTVVGVTGATVAPGTSRERNQKINLGK
Ga0310914_116422151	3300033289	Soil	MDLDLERIAFGGVVGVTGGTVAAGTDREPNQQINLGEKLDEIV

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F062647

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences