NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome Family F062606

Metagenome Family F062606

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F062606
Family Type Metagenome
Number of Sequences 130
Average Sequence Length 65 residues
Representative Sequence MRIFAAALALSLLAAPAFARTRSSSKGPRAGGYCAKSAVGTTSTDSKGNTLECKADKRGRARWTKK
Number of Associated Samples 105
Number of Associated Scaffolds 130

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 87.69 %
% of genes near scaffold ends (potentially truncated) 19.23 %
% of genes from short scaffolds (< 2000 bps) 70.00 %
Associated GOLD sequencing projects 85
AlphaFold2 3D model prediction Yes
3D model pTM-score0.50

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Bacteria (97.692 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil
(32.308 % of family members)
Environment Ontology (ENVO) Unclassified
(51.538 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(62.308 % of family members)


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Multiple Sequence Alignments

Select alignment to view:      

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: Yes Secondary Structure distribution: α-helix: 11.70%    β-sheet: 15.96%    Coil/Unstructured: 72.34%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.50
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 130 Family Scaffolds
PF01553Acyltransferase 18.46
PF01370Epimerase 9.23
PF13241NAD_binding_7 2.31
PF00590TP_methylase 1.54
PF07883Cupin_2 1.54
PF00583Acetyltransf_1 1.54
PF04066MrpF_PhaF 1.54
PF03601Cons_hypoth698 0.77
PF01432Peptidase_M3 0.77
PF04039MnhB 0.77
PF03460NIR_SIR_ferr 0.77
PF07642BBP2 0.77
PF08281Sigma70_r4_2 0.77
PF14539DUF4442 0.77

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 130 Family Scaffolds
COG2212Multisubunit Na+/H+ antiporter, MnhF subunitInorganic ion transport and metabolism [P] 1.54
COG0339Zn-dependent oligopeptidase, M3 familyPosttranslational modification, protein turnover, chaperones [O] 0.77
COG1164Oligoendopeptidase FAmino acid transport and metabolism [E] 0.77
COG2111Multisubunit Na+/H+ antiporter, MnhB subunitInorganic ion transport and metabolism [P] 0.77
COG2855Uncharacterized membrane protein YadS, UPF0324 familyFunction unknown [S] 0.77

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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms97.69 %
UnclassifiedrootN/A2.31 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300002558|JGI25385J37094_10012637All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria3022Open in IMG/M
3300002561|JGI25384J37096_10000634All Organisms → cellular organisms → Bacteria10578Open in IMG/M
3300003324|soilH2_10288306All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria3492Open in IMG/M
3300004153|Ga0063455_100758558All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia664Open in IMG/M
3300004153|Ga0063455_101181731Not Available572Open in IMG/M
3300005167|Ga0066672_10012353All Organisms → cellular organisms → Bacteria → Proteobacteria4178Open in IMG/M
3300005167|Ga0066672_10015504All Organisms → cellular organisms → Bacteria3845Open in IMG/M
3300005171|Ga0066677_10016975All Organisms → cellular organisms → Bacteria3293Open in IMG/M
3300005171|Ga0066677_10199333All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria1120Open in IMG/M
3300005171|Ga0066677_10296794All Organisms → cellular organisms → Bacteria923Open in IMG/M
3300005174|Ga0066680_10180761All Organisms → cellular organisms → Bacteria1328Open in IMG/M
3300005175|Ga0066673_10342558All Organisms → cellular organisms → Bacteria873Open in IMG/M
3300005177|Ga0066690_10410672All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria918Open in IMG/M
3300005179|Ga0066684_10083638All Organisms → cellular organisms → Bacteria1919Open in IMG/M
3300005179|Ga0066684_10490812All Organisms → cellular organisms → Bacteria824Open in IMG/M
3300005179|Ga0066684_10504891All Organisms → cellular organisms → Bacteria811Open in IMG/M
3300005180|Ga0066685_10625112All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria741Open in IMG/M
3300005186|Ga0066676_10844043All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria618Open in IMG/M
3300005187|Ga0066675_10031918All Organisms → cellular organisms → Bacteria3098Open in IMG/M
3300005330|Ga0070690_100189911All Organisms → cellular organisms → Bacteria1424Open in IMG/M
3300005336|Ga0070680_100392233All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria1183Open in IMG/M
3300005340|Ga0070689_100733080All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia865Open in IMG/M
3300005445|Ga0070708_100002738All Organisms → cellular organisms → Bacteria13685Open in IMG/M
3300005445|Ga0070708_100020608All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales5563Open in IMG/M
3300005447|Ga0066689_10024453All Organisms → cellular organisms → Bacteria3001Open in IMG/M
3300005447|Ga0066689_10729862All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Segniliparaceae → Segniliparus → Segniliparus rugosus618Open in IMG/M
3300005458|Ga0070681_10579790All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae1036Open in IMG/M
3300005467|Ga0070706_100218718All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria1778Open in IMG/M
3300005529|Ga0070741_10026277All Organisms → cellular organisms → Bacteria8539Open in IMG/M
3300005530|Ga0070679_101528681Not Available615Open in IMG/M
3300005552|Ga0066701_10086262All Organisms → cellular organisms → Bacteria1809Open in IMG/M
3300005552|Ga0066701_10273157All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria1046Open in IMG/M
3300005555|Ga0066692_10793732All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria583Open in IMG/M
3300005556|Ga0066707_10011197All Organisms → cellular organisms → Bacteria4422Open in IMG/M
3300005561|Ga0066699_10302596All Organisms → cellular organisms → Bacteria1139Open in IMG/M
3300005568|Ga0066703_10289689All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria992Open in IMG/M
3300005576|Ga0066708_10122671All Organisms → cellular organisms → Bacteria1569Open in IMG/M
3300005598|Ga0066706_10868980All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria705Open in IMG/M
3300005843|Ga0068860_101364484All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia730Open in IMG/M
3300006032|Ga0066696_10994179All Organisms → cellular organisms → Bacteria533Open in IMG/M
3300006034|Ga0066656_10870859All Organisms → cellular organisms → Bacteria577Open in IMG/M
3300006046|Ga0066652_100293513All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria1441Open in IMG/M
3300006796|Ga0066665_10093327All Organisms → cellular organisms → Bacteria2191Open in IMG/M
3300006797|Ga0066659_10017245All Organisms → cellular organisms → Bacteria4045Open in IMG/M
3300006797|Ga0066659_11698414All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria532Open in IMG/M
3300006800|Ga0066660_10419322All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria1110Open in IMG/M
3300006800|Ga0066660_10898967All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria721Open in IMG/M
3300006854|Ga0075425_101603589All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria733Open in IMG/M
3300006871|Ga0075434_100885628All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria908Open in IMG/M
3300006871|Ga0075434_101488360All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria686Open in IMG/M
3300007255|Ga0099791_10086680All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria1432Open in IMG/M
3300007258|Ga0099793_10236704All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria880Open in IMG/M
3300009012|Ga0066710_100734504All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria1508Open in IMG/M
3300009012|Ga0066710_102429586All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria759Open in IMG/M
3300009137|Ga0066709_100320589All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria2115Open in IMG/M
3300009137|Ga0066709_100575416All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria1600Open in IMG/M
3300009143|Ga0099792_10049196All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria2047Open in IMG/M
3300009162|Ga0075423_12911448Not Available524Open in IMG/M
3300009792|Ga0126374_10411836All Organisms → cellular organisms → Bacteria948Open in IMG/M
3300010046|Ga0126384_10079894All Organisms → cellular organisms → Bacteria2352Open in IMG/M
3300010325|Ga0134064_10195177All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria723Open in IMG/M
3300010326|Ga0134065_10089489All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria1007Open in IMG/M
3300010336|Ga0134071_10190502All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria1009Open in IMG/M
3300012203|Ga0137399_10273704All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria1389Open in IMG/M
3300012205|Ga0137362_10128200All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria2156Open in IMG/M
3300012208|Ga0137376_10004535All Organisms → cellular organisms → Bacteria → Spirochaetes → Spirochaetia → Spirochaetales → Spirochaetaceae → Alkalispirochaeta → Alkalispirochaeta odontotermitis8974Open in IMG/M
3300012361|Ga0137360_10012553All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Anaeromyxobacteraceae → Anaeromyxobacter5445Open in IMG/M
3300012361|Ga0137360_10507883All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria1026Open in IMG/M
3300012362|Ga0137361_10616442All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria994Open in IMG/M
3300012685|Ga0137397_10060127All Organisms → cellular organisms → Bacteria → Proteobacteria2740Open in IMG/M
3300012922|Ga0137394_10085950All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria2636Open in IMG/M
3300012923|Ga0137359_10414250All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria1194Open in IMG/M
3300012923|Ga0137359_10758973All Organisms → cellular organisms → Bacteria842Open in IMG/M
3300012927|Ga0137416_10725067All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria875Open in IMG/M
3300015264|Ga0137403_10163936All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria2179Open in IMG/M
3300017930|Ga0187825_10041971All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria1545Open in IMG/M
3300018027|Ga0184605_10002483All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Anaeromyxobacteraceae → Anaeromyxobacter6227Open in IMG/M
3300018029|Ga0187787_10381085All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria551Open in IMG/M
3300018433|Ga0066667_10010287All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria4465Open in IMG/M
3300018433|Ga0066667_10344490All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria1182Open in IMG/M
3300018468|Ga0066662_10071376All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria2327Open in IMG/M
3300018468|Ga0066662_10640506All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria1003Open in IMG/M
3300018468|Ga0066662_11696623All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria660Open in IMG/M
3300018482|Ga0066669_10000237All Organisms → cellular organisms → Bacteria → Proteobacteria16031Open in IMG/M
3300024330|Ga0137417_1073911All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria943Open in IMG/M
3300024347|Ga0179591_1017714All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria2769Open in IMG/M
3300025910|Ga0207684_10222796All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria1627Open in IMG/M
3300025910|Ga0207684_10349408All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales1273Open in IMG/M
3300025912|Ga0207707_10355140All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria1262Open in IMG/M
3300025938|Ga0207704_11220271All Organisms → cellular organisms → Bacteria642Open in IMG/M
3300026295|Ga0209234_1012089All Organisms → cellular organisms → Bacteria → Proteobacteria3278Open in IMG/M
3300026295|Ga0209234_1121683All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria961Open in IMG/M
3300026296|Ga0209235_1001494All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria12698Open in IMG/M
3300026297|Ga0209237_1000550All Organisms → cellular organisms → Bacteria21561Open in IMG/M
3300026298|Ga0209236_1039491All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria2443Open in IMG/M
3300026300|Ga0209027_1159967All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria758Open in IMG/M
3300026301|Ga0209238_1109170All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria928Open in IMG/M
3300026308|Ga0209265_1031006All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria1653Open in IMG/M
3300026313|Ga0209761_1243329All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria722Open in IMG/M
3300026315|Ga0209686_1034701All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria1919Open in IMG/M
3300026332|Ga0209803_1103718All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria1159Open in IMG/M
3300026335|Ga0209804_1198029All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria842Open in IMG/M
3300026498|Ga0257156_1104007All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria591Open in IMG/M
3300026523|Ga0209808_1058687All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria1724Open in IMG/M
3300026524|Ga0209690_1015257All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria3987Open in IMG/M
3300026524|Ga0209690_1121058All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria1031Open in IMG/M
3300026529|Ga0209806_1059157All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria1766Open in IMG/M
3300026532|Ga0209160_1213181All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria693Open in IMG/M
3300026538|Ga0209056_10032816All Organisms → cellular organisms → Bacteria4871Open in IMG/M
3300026540|Ga0209376_1034804All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria3096Open in IMG/M
3300026542|Ga0209805_1005934All Organisms → cellular organisms → Bacteria → Proteobacteria6762Open in IMG/M
3300026547|Ga0209156_10072784All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria1757Open in IMG/M
3300026550|Ga0209474_10061200All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria2651Open in IMG/M
3300026550|Ga0209474_10461984All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria644Open in IMG/M
3300027643|Ga0209076_1121550All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria737Open in IMG/M
3300027667|Ga0209009_1164182All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria564Open in IMG/M
3300027903|Ga0209488_10176888All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria1611Open in IMG/M
3300027903|Ga0209488_11091294All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria545Open in IMG/M
3300028381|Ga0268264_11251704All Organisms → cellular organisms → Bacteria752Open in IMG/M
3300028536|Ga0137415_10243740All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria1607Open in IMG/M
3300028792|Ga0307504_10152621All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria785Open in IMG/M
3300028799|Ga0307284_10121074All Organisms → cellular organisms → Bacteria993Open in IMG/M
3300031720|Ga0307469_10189403All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria1593Open in IMG/M
3300031820|Ga0307473_10199647All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria1186Open in IMG/M
3300032180|Ga0307471_100780666All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria1122Open in IMG/M
3300032180|Ga0307471_104045207All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria518Open in IMG/M
3300032770|Ga0335085_10005013All Organisms → cellular organisms → Bacteria21578Open in IMG/M
3300032782|Ga0335082_10297524All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria1487Open in IMG/M
3300033004|Ga0335084_10486399All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria1268Open in IMG/M
3300033480|Ga0316620_10097593All Organisms → cellular organisms → Bacteria2213Open in IMG/M


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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil32.31%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil16.15%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil15.38%
SoilEnvironmental → Terrestrial → Soil → Loam → Grasslands → Soil5.38%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere3.85%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil3.08%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Soil3.08%
Corn RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere3.08%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere3.08%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil2.31%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil1.54%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil1.54%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere1.54%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere1.54%
Freshwater SedimentEnvironmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment0.77%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment0.77%
Surface SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil0.77%
Sugarcane Root And Bulk SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Sugarcane Root And Bulk Soil0.77%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil0.77%
Tropical PeatlandEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland0.77%
Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil0.77%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere0.77%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300002558Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_40cmEnvironmentalOpen in IMG/M
3300002561Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_40cmEnvironmentalOpen in IMG/M
3300003324Sugarcane bulk soil Sample H2EnvironmentalOpen in IMG/M
3300004153Grasslands soil microbial communities from Hopland, California, USA (version 2)EnvironmentalOpen in IMG/M
3300005167Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121EnvironmentalOpen in IMG/M
3300005171Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126EnvironmentalOpen in IMG/M
3300005174Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129EnvironmentalOpen in IMG/M
3300005175Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122EnvironmentalOpen in IMG/M
3300005177Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139EnvironmentalOpen in IMG/M
3300005179Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133EnvironmentalOpen in IMG/M
3300005180Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134EnvironmentalOpen in IMG/M
3300005186Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125EnvironmentalOpen in IMG/M
3300005187Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124EnvironmentalOpen in IMG/M
3300005330Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaGEnvironmentalOpen in IMG/M
3300005336Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaGEnvironmentalOpen in IMG/M
3300005340Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaGEnvironmentalOpen in IMG/M
3300005445Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaGEnvironmentalOpen in IMG/M
3300005447Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138EnvironmentalOpen in IMG/M
3300005458Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaGEnvironmentalOpen in IMG/M
3300005467Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaGEnvironmentalOpen in IMG/M
3300005529Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen16_06102014_R1EnvironmentalOpen in IMG/M
3300005530Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaGEnvironmentalOpen in IMG/M
3300005552Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150EnvironmentalOpen in IMG/M
3300005555Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141EnvironmentalOpen in IMG/M
3300005556Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156EnvironmentalOpen in IMG/M
3300005561Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148EnvironmentalOpen in IMG/M
3300005568Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152EnvironmentalOpen in IMG/M
3300005576Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157EnvironmentalOpen in IMG/M
3300005598Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155EnvironmentalOpen in IMG/M
3300005843Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2Host-AssociatedOpen in IMG/M
3300006032Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145EnvironmentalOpen in IMG/M
3300006034Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_105EnvironmentalOpen in IMG/M
3300006046Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101EnvironmentalOpen in IMG/M
3300006796Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114EnvironmentalOpen in IMG/M
3300006797Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108EnvironmentalOpen in IMG/M
3300006800Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109EnvironmentalOpen in IMG/M
3300006854Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4Host-AssociatedOpen in IMG/M
3300006871Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3Host-AssociatedOpen in IMG/M
3300007255Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1EnvironmentalOpen in IMG/M
3300007258Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3EnvironmentalOpen in IMG/M
3300009012Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159EnvironmentalOpen in IMG/M
3300009137Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158EnvironmentalOpen in IMG/M
3300009143Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2EnvironmentalOpen in IMG/M
3300009162Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2Host-AssociatedOpen in IMG/M
3300009792Tropical forest soil microbial communities from Panama - MetaG Plot_12EnvironmentalOpen in IMG/M
3300010046Tropical forest soil microbial communities from Panama - MetaG Plot_36EnvironmentalOpen in IMG/M
3300010325Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_2_0_1 metaGEnvironmentalOpen in IMG/M
3300010326Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_2_24_1 metaGEnvironmentalOpen in IMG/M
3300010336Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09082015EnvironmentalOpen in IMG/M
3300012203Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaGEnvironmentalOpen in IMG/M
3300012205Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaGEnvironmentalOpen in IMG/M
3300012208Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaGEnvironmentalOpen in IMG/M
3300012361Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaGEnvironmentalOpen in IMG/M
3300012362Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaGEnvironmentalOpen in IMG/M
3300012685Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaGEnvironmentalOpen in IMG/M
3300012922Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaGEnvironmentalOpen in IMG/M
3300012923Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaGEnvironmentalOpen in IMG/M
3300012927Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300015264Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300017930Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_5EnvironmentalOpen in IMG/M
3300018027Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_coexEnvironmentalOpen in IMG/M
3300018029Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_BV01_MP06_20_MGEnvironmentalOpen in IMG/M
3300018433Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116EnvironmentalOpen in IMG/M
3300018468Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111EnvironmentalOpen in IMG/M
3300018482Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118EnvironmentalOpen in IMG/M
3300024330Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (PacBio error correction)EnvironmentalOpen in IMG/M
3300024347Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_08_16fungal (PacBio error correction)EnvironmentalOpen in IMG/M
3300025910Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025912Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025938Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026295Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_20cm (SPAdes)EnvironmentalOpen in IMG/M
3300026296Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_20cm (SPAdes)EnvironmentalOpen in IMG/M
3300026297Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_40cm (SPAdes)EnvironmentalOpen in IMG/M
3300026298Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_40cm (SPAdes)EnvironmentalOpen in IMG/M
3300026300Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_20cm (SPAdes)EnvironmentalOpen in IMG/M
3300026301Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_20cm (SPAdes)EnvironmentalOpen in IMG/M
3300026308Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_103 (SPAdes)EnvironmentalOpen in IMG/M
3300026313Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_40cm (SPAdes)EnvironmentalOpen in IMG/M
3300026315Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126 (SPAdes)EnvironmentalOpen in IMG/M
3300026332Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138 (SPAdes)EnvironmentalOpen in IMG/M
3300026335Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139 (SPAdes)EnvironmentalOpen in IMG/M
3300026498Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NI-49-AEnvironmentalOpen in IMG/M
3300026523Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157 (SPAdes)EnvironmentalOpen in IMG/M
3300026524Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150 (SPAdes)EnvironmentalOpen in IMG/M
3300026529Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152 (SPAdes)EnvironmentalOpen in IMG/M
3300026532Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153 (SPAdes)EnvironmentalOpen in IMG/M
3300026538Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114 (SPAdes)EnvironmentalOpen in IMG/M
3300026540Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134 (SPAdes)EnvironmentalOpen in IMG/M
3300026542Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148 (SPAdes)EnvironmentalOpen in IMG/M
3300026547Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124 (SPAdes)EnvironmentalOpen in IMG/M
3300026550Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145 (SPAdes)EnvironmentalOpen in IMG/M
3300027643Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3 (SPAdes)EnvironmentalOpen in IMG/M
3300027667Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM3_M2 (SPAdes)EnvironmentalOpen in IMG/M
3300027903Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)EnvironmentalOpen in IMG/M
3300028381Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300028536Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300028792Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 19_SEnvironmentalOpen in IMG/M
3300028799Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_123EnvironmentalOpen in IMG/M
3300031720Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515EnvironmentalOpen in IMG/M
3300031820Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515EnvironmentalOpen in IMG/M
3300032180Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515EnvironmentalOpen in IMG/M
3300032770Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5EnvironmentalOpen in IMG/M
3300032782Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.1EnvironmentalOpen in IMG/M
3300033004Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.4EnvironmentalOpen in IMG/M
3300033480Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M1_C1_D5_BEnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
JGI25385J37094_1001263723300002558Grasslands SoilMRXFAAALALSLLAAPAFARTRSSNKGPRAGGYCAKSAVGTTTTDSKGNTLECKADKRGRARWTKK*
JGI25384J37096_1000063423300002561Grasslands SoilMRIFAAALALSLLAAPAFARTRSSNKGPRAGGYCAKSAVGTTTTDSKGNTLECKADKRGRARWTKK*
soilH2_1028830623300003324Sugarcane Root And Bulk SoilMRMLAAAVALSLLAAPAFARARTNRKGPHAGGSCSKGAIGTTSTDRKGVALQCKADRKGRARWVRK*
Ga0063455_10075855813300004153SoilMRTIALLVAFSLFAAPAFARRSRAKKGPRPGGYCSRSAVGTTSTDSKGVPLECKGDPRGGARWTKK*
Ga0063455_10118173123300004153SoilMRSFAAVLALSLLAAPVFARSRSAKKTPRAGGYCPRNAVGTTSTDKKGASLECKGDPKGNPRWTRK*
Ga0066672_1001235323300005167SoilMRISAAALALSLLAAPAFARTRSSSKGPRAGGYCAKSAVGTTTTDSKGNTLECKADKRGRARWTKK*
Ga0066672_1001550443300005167SoilMRTLAAALALALLAAPAFARTRSSSKSPRAGGYCGKSAVGTTTTDSKGNALECKADKRGRARWTKK*
Ga0066677_1001697523300005171SoilMRLVAVSLAFCLLAAPAFARRSSSKGPRAGGYCSKSAVGTTSTDKKGVTLECKADGRGRARWTRK*
Ga0066677_1019933323300005171SoilMRTLAAALALALLAAPAFARTRSSSKSPRAGGYCGKSAVGITTTDSKGNALECKADKRGR
Ga0066677_1029679423300005171SoilMRLVAVALAAALLAAPAFARRSPSKGPRAGGYCSKSAVGTTSTDKKGATLECKADRRGRARWTKK*
Ga0066680_1018076123300005174SoilMRLVAVALAFSLLAAPAFARRSSSKGPRAGGYCSKSAVGTTSTDKKGATLECKADGKGRARWTRK*
Ga0066673_1034255823300005175SoilMRLAAVALAVSLLAAPAFARRSPSKGPRAGGYCLKSAVGTTSTDKKGATLECKADGKGRARWTKK*
Ga0066690_1041067213300005177SoilAAALALSLLAAPAFARTRSSSKGPRAGGYCAKSAVGTTTTDSKGNTLECKADKRGRARWTKK*
Ga0066684_1008363823300005179SoilMRLVAVSLAFSLLAAPAFARRSSSKGPRAGGYCSKSAVGTTSTDKKGVTLECKADGRGRARWTRK*
Ga0066684_1049081223300005179SoilMRLVAAALAFSLLAAPAFARRSSSKGPHAGGYCSKSAVGTTSTDKKGATLECKADGKGRARWTRK*
Ga0066684_1050489123300005179SoilMRTLAAALALSLLAAPAFARNRSSSKNPRAGGYCAKSAVGTTTTDSKGNALECKADKRGRARWTKK*
Ga0066685_1062511223300005180SoilMRTLAAALALSLLAAPAFARNRSSSKNPRAGGYCAKSAVGTTTTDSKGNALECKADKRGRARWTKN*
Ga0066676_1084404323300005186SoilMRTLAAALALFLLAAPAFARTRSSSKSPRAGGYCAKSAVGTTTTDSKGNALECKADKRGRARWTKK*
Ga0066675_1003191823300005187SoilMRTLAAALALSLLAASAFARNRSSSKNPRAGGYCAKSAVGTTTTDSKGNALECKADKRGRARWTKK*
Ga0070690_10018991123300005330Switchgrass RhizosphereMRTFALLVAFSLFAAPAFARRSHAKKGPRPGGYCSKSAVGTTSTDSRGLPLECKGDPRGRARWTKK*
Ga0070680_10039223323300005336Corn RhizosphereMRTLAAALALSLLTAPAFARARTSRKGPHAGGSCSKAAIGTTSTDRKGATLTCRADTRGRGRWTKK*
Ga0070689_10073308013300005340Switchgrass RhizosphereMRTFALLVAFSLFAAPAFARRSHAKKGPRPGGYCSKSAVGTTSTDSRGLPLECKGDSRGRARWTKK*
Ga0070708_10000273873300005445Corn, Switchgrass And Miscanthus RhizosphereMRTLAAGLALALLAAPAWGRARNNSKGPRAGGYCSKSAVGTTSTDKKGVSLECKASRNGKPRWVRK*
Ga0070708_10002060863300005445Corn, Switchgrass And Miscanthus RhizosphereMRMLAAALAFSLLAAPAFARSKSAKKGPRAGGYCSKGAVGTTSTDNKGATLECRADRNGKPRWIRK*
Ga0066689_1002445323300005447SoilMRTLAAALALALLAAPAFARTRSSSKSPRAGGYCGKSAVGTTTTDSKGNALECKADKRGRARWMKK*
Ga0066689_1072986213300005447SoilMRIFAAALALSLLAAPAFARTRSSNRGPRAGGYCAKSAVGTTTTDSKGNTLECKADKRGRARWTKK*
Ga0070681_1057979013300005458Corn RhizosphereMRTLAAALALSLLTAPAFARARTSRKGPHAGGSCSKAAIGTTSTDRKGATLTC
Ga0070706_10021871813300005467Corn, Switchgrass And Miscanthus RhizosphereMRTVAAALALSLLAAPAFARTRSSSKTPRAGGYCAKSAVGTTTTDSKGNALECKADKRGRARWTKK*
Ga0070741_1002627723300005529Surface SoilMRTLAAALALSLLTAPAFARARTSRKGPHAGGSCSKAAIGTTSTDRKGATLTCRADTRGRGRWRKK*
Ga0070679_10152868113300005530Corn RhizosphereMRKLAAALALSLLTAPAFARARTSRKGPHAGGSCSKAAIGTTSTDRKGATLTCRADTRGRGRWR
Ga0066701_1008626223300005552SoilMRIFAAALALSLLAAPAFARTRSSSKGPRAGGYCAKSAVGTTSTDSKGNTLECKADKRGRARWTKK*
Ga0066701_1027315723300005552SoilMRTLAAALALSLLAAPAFARTRNSSKSPRAGGYCAKSAVGTTTTDSKGNALECKADKRGRARWTKK*
Ga0066692_1079373223300005555SoilRTRMRTLAAALALSLLAAPAFARTRSSSKSPRAGGYCAKSAVGTTTTDSKGNALECKADKRGRARWTKK*
Ga0066707_1001119733300005556SoilMRTLAAALALSLLAAPAFARTRSSSKSPRAGGYCAKSAVGTTTTDSKGNALECKADKRGRARWTKK*
Ga0066699_1030259613300005561SoilMRTLAAALALALLAAPAFARTRNSSKSPRAGGYCAKSAVGTTTTDSKGNALECKADKRGRARWTKK*
Ga0066703_1028968923300005568SoilMRTLAAALALSLLAAPAFARTRSSSKSPRAGGYCGKSAVGTTTTDSKGNALECKADKRGRARWMKK*
Ga0066708_1012267133300005576SoilMRTLAAALALSLLAAPAFARTRSSSKSPRAGGYCGKSAVGTTTTDSKGNALECKADKRGRARWTKK*
Ga0066706_1086898013300005598SoilMRTLAAALALALLAAPAFARTRSSSKSPRAGGYCGKSAVGTTTTDSKGNALECKADKRGRARWT
Ga0068860_10136448413300005843Switchgrass RhizosphereDRMRTFALLVAFSLFAAPAFARRSHAKKGPRPGGYCSKSAVGTTSTDSRGLPLECKGDSRGRARWTKK*
Ga0066696_1099417923300006032SoilMRLVAAALAFSLLAAPAFARRGSSKGPHAGGYCSKSAVGTTSTDKKGATLECKADGKGRARWTRK*
Ga0066656_1087085923300006034SoilMRPLAAAVALSLLAAPAFARGRNASKAPRKGADCPRSAVGTMSTDKKGASLRCKADKAGTPRWTRK*
Ga0066652_10029351323300006046SoilMRPLAAVLALSLLAAPAFARKNASKGPHKGGHCSKSAVGTTSTDSKGASLECKADKGGKPRWTRK*
Ga0066665_1009332723300006796SoilMRLVAVALAFSLLAAPAFARRSSSKGPRAGGYCSKSAVGTTSTDKKGATLECKADRKGRARWTKK*
Ga0066659_1001724523300006797SoilMRISAAALALSLLAAPAFARTRSSSKGPRAGGYCAKSAVGTTTTDSKGNTLECKADNRGRARWTKK*
Ga0066659_1169841423300006797SoilMRPLAAAVALSLLAAPAFARGRNASKAPRKGADCPRSAVGTMSTDKKGASLRCKADKA
Ga0066660_1041932213300006800SoilMRLVAAALAFSLLAAPSFARRTSSKGPRAGGYCAKSAVGTTTTDSKGNTLECKADKRGRARWTKK*
Ga0066660_1089896723300006800SoilMRLVAVSLAFCLLAAPAFARRSSSKGPRAGGYCSKSAVGTTSRDKKGAPLEGKADGKGRARWTRK*
Ga0075425_10160358913300006854Populus RhizosphereMRMLAAALAFALIAPPAFARTRNAKKGPRAGGSCSKSAVGTTSTDRKGAPLRCKAEKHGNPRWVRK*
Ga0075434_10088562823300006871Populus RhizosphereMRLLAAALALSLLAAPAFARKNASKGPRKGGYCPKSAVGTTSTDSKGASLECKADKGGKPRWTRK*
Ga0075434_10148836013300006871Populus RhizosphereMRMLAAALAFALIALPAFARTRNAKKGPRAGGSCSKSAVGTTSTDRKGAPLRCKAEKHGNPRWVRK*
Ga0099791_1008668023300007255Vadose Zone SoilMRTLAAALALALLAAPAWARARNSSKGPRAGGYCSKNAVGTTSTDKKGVSLECKADRNGKARWVRK*
Ga0099793_1023670413300007258Vadose Zone SoilMRIFAAALALSLLAAPAFARTRSSSKGPRAGGYCAKSAVGTTTTDSKGNTLECKADKRGRARWKKK*
Ga0066710_10073450423300009012Grasslands SoilMRTLAAALALSLLAAPAFARNRSSSKNPRAGGYCAKCAVGTTTTDSKGNALECKADKRGRARWTKK
Ga0066710_10242958623300009012Grasslands SoilMRISAAALALSLLAAPAFARIRSSSKGPRADGYCAKSSVGTTTTDSKGNTLECKADKRGRARWTKK
Ga0066709_10032058923300009137Grasslands SoilMELLRRNRMRLVAVSLAFCLLAAPAFARRSSSKGPRAGGYCSKSAVGTTSTDKKGVTLECKADGRGRARWTRK*
Ga0066709_10057541623300009137Grasslands SoilMRTLAAALALSLLAAPAFARNRSSSKNPRAGGYCAKSAVGTTTTDSKGNALECKADKRGRARWAKK*
Ga0099792_1004919623300009143Vadose Zone SoilMRTLAAALALALLAAPAWARARNSKGPRAGGYCSKNAVGTTSTDKKGVSLECKADRNGKPRWVRK*
Ga0075423_1291144823300009162Populus RhizosphereMRTLAAALALALLAAPAWGRPRNNSKGPRAGGYCSKSAVGTTSTDKKGVSLECKASRNGKPRWVRK*
Ga0126374_1041183623300009792Tropical Forest SoilMRLLAAALAFSLIAAPALARSKNAKKGPKAGNYCSKSAVGTTSTDNKGGTLECKADKNGTSRWTRK*
Ga0126384_1007989443300010046Tropical Forest SoilMRLLAAALAFSLIAAPALARSKNAKKGPKAGNYCSKSAVGTTSTDNKGGTLECKANKNGTARWTRK*
Ga0134064_1019517723300010325Grasslands SoilMRPLAAVLALSLLAAPAFARKNASKGPHKGGHCSKIAVGTTSTDSKGASLECKADKGGKPRWTRK*
Ga0134065_1008948923300010326Grasslands SoilMELLRRNRMRLVAVSLAFSLLAAPAFARRSSSKGPRAGGYCSKSAVGTTSTDKKGVTLECKADGRGRARWTRK*
Ga0134071_1019050223300010336Grasslands SoilMRLVAVALAFSLLAAPAFARRSSSKGPRAGGYCSKSAVGTTSTDKKGVTLECKADGRGRARWTRK*
Ga0137399_1027370423300012203Vadose Zone SoilMRTLAAALALSLLAAPAFARTRNSSKSPRAGGYCAKSAVGTTTTDSKGNALECKAGKRGRARWTKK*
Ga0137362_1012820023300012205Vadose Zone SoilMFAAALALSLLAAPAFARTRSSNRGPRAGGYCAKSAVGTTTTDSKGNTLECKADKRGRARWTKK*
Ga0137376_1000453583300012208Vadose Zone SoilRLVAVALAFSLLAAPAFARRSSSKGPRAGGYCSKSAVGRTSTDKKGATLECKADGKGRARWTRK*
Ga0137360_1001255373300012361Vadose Zone SoilMRTLAAALALALLAVPAWARARNSKGPRAGGYCSKNAVGTTSTDKKGVSLECKADRNGKARWVRK*
Ga0137360_1050788323300012361Vadose Zone SoilMRIFAAALALSLVAAPAFARTRSSSKGPRAGGYCAKSAVGTTSTDSKGNTLECKADKRGRARWTKK*
Ga0137361_1061644213300012362Vadose Zone SoilLALLAAPAWARARNSSKGPRAGGYCSKNAVGTTSTDKKGVSLECKADRNGKARWVRK*
Ga0137397_1006012743300012685Vadose Zone SoilMRMLAAALAFSLIAAPALARSKPKKGPKAGGYCSKSAVGTTSTDNKGATLACRADKNGTARWTRK*
Ga0137394_1008595023300012922Vadose Zone SoilMRMLAAALAFSLIAAPALARSKNAKKGPKAGGYCSKSAVGTTSTDNKGATLACRADKSGTARWTRK*
Ga0137359_1041425023300012923Vadose Zone SoilMRTLAAALALALLAAPAWARARNSSKGPRAGGYCSKNAVGTTSTDKKGVSLECKADRNGKPRWVRK*
Ga0137359_1075897333300012923Vadose Zone SoilLLGAPAWARARNNSKGPRAGGYCSRSAVGTTSTDKKGVSLECKAGKNGKPRWVRK*
Ga0137416_1072506723300012927Vadose Zone SoilRTLAAALALSLLPAPAFARTRNSSKSPRAGGYCAKSAVGTTTTDSKGNALECKAGKRGRARWTKK*
Ga0137403_1016393623300015264Vadose Zone SoilMRTLAAALALSLLAAPAFARNRSSSKNPRAGGYCAYCAVGTATTDSKGNALECKADKRGRARWTKK*
Ga0187825_1004197123300017930Freshwater SedimentMRMLAAALALSLLTAPAFARARTSRKGPHAGGSCSKAAIGTTSTDRKGATLTCRADARGRGRWTKK
Ga0184605_1000248383300018027Groundwater SedimentMRLVAAALAFSLLAAPAFARRSSSKGPRAGGYCPKSAVGTTSTDKKGATLECKADGKGQARWTKK
Ga0187787_1038108513300018029Tropical PeatlandMRTLAAALALWLFAGPAFARVRSARKGPHAGGYCSKSAVGTTSTDSKGAALQCRADRKG
Ga0066667_1001028733300018433Grasslands SoilMRLVAVSLAFCLLAAPAFARRSSSKGPRAGGYCSKSAVGTTSTDKKGVTLECKADGRGRARWTRK
Ga0066667_1034449023300018433Grasslands SoilMRTLAAALALFLLAAPAFARTRSSSKSPRAGGYCAKSAVGTTTTDSKGNALECKAEKRGRARWTKK
Ga0066662_1007137643300018468Grasslands SoilMRISAAALALSLLAAPAFARTRSSSKGPRAGGYCAKSAVGTTTTDSKGNTLECKADKRGRARWTKK
Ga0066662_1064050613300018468Grasslands SoilMRLVAVALAFSLLAAPAFARRSSSKGPRAGGYCSKSAVGTTSTDKKGATLEYKADGKGRARWTRK
Ga0066662_1169662323300018468Grasslands SoilMRTLAAALALALLAAPAFARTRSSSKSPRAGGYCGKSAVGTTTTDSKGNALECKADKRGRARWMKK
Ga0066669_1000023783300018482Grasslands SoilMRLVAVSLAFSLLAAPAFARRSSSKGPRAGGYCSKSAVGTTSTDKKGVTLECKADGRGRARWTRK
Ga0137417_107391123300024330Vadose Zone SoilMRIFAAALALSLLAAPAFARTRSSSKGPRAGGYCAKSAVGTTTTDSKGNTLECKADKRGRARWKKK
Ga0179591_101771433300024347Vadose Zone SoilMRTLAAALALALLAVPAWARARNSKGPRAGGYCSKNAVGTTSTDKKGVSLECKANRNGKPRWVRK
Ga0207684_1022279623300025910Corn, Switchgrass And Miscanthus RhizosphereMRTVAAALALSLLAAPAFARTRSSSKTPRAGGYCAKSAVGTTTTDSKGNALECKADKRGRARWTKK
Ga0207684_1034940813300025910Corn, Switchgrass And Miscanthus RhizosphereMRTLAAGLALALLAAPAWGRARNNSKGPRAGGYCSKSAVGTTSTDKKGVSLECKASRNGKPRWVRK
Ga0207707_1035514023300025912Corn RhizosphereMRKLAAALALSLLTAPAFARARTSRKGPHAGGSCSKAAIGTTSTDRKGATLTCRADTRGRGRWTKK
Ga0207704_1122027133300025938Miscanthus RhizosphereRSKVAYHAYSTGDRMRTFALLVAFSLFAAPAFARRSHAKKGPRPGGYCSKSAVGTTSTDSRGLPLECKGDSRGRARWTKK
Ga0209234_101208933300026295Grasslands SoilMRTLAAALALALLAAPAFARTRSSSKSPRAGGYCGKSAVGTTTTDSKGNALECKADKRGRARWTKK
Ga0209234_112168323300026295Grasslands SoilMRLVAVALAFSLLAAPAFARRSSSKGPRAGGYCSKSAVGTTSTDKKGATLECKADRKGRARWTKK
Ga0209235_1001494123300026296Grasslands SoilMRIFAAALALSLLAAPAFARTRSSSKGPRAGGYCAKSAVGTTSTDSKGNTLECKADKRGRARWTKK
Ga0209237_1000550153300026297Grasslands SoilMRIFAAALALSLLAAPAFARTRSSNKGPRAGGYCAKSAVGTTTTDSKGNTLECKADKRGRARWTKK
Ga0209236_103949113300026298Grasslands SoilMRMFAAALALSLLAAPAFARTRSSNRGPRAGGYCAKSAVGTTTTDSKGNTLECKADKR
Ga0209027_115996713300026300Grasslands SoilAAALALSLLAAPAFARTRSSSKGPRAGGYCAKSAVGTTTTDSKGNALECKADKRGRARWTKK
Ga0209238_110917013300026301Grasslands SoilMRIFAAALALSLLAAPARTRSSSKGPRAGGYCAKSAVGTTTTDSKGTSLECKADKRSRARWTKK
Ga0209265_103100623300026308SoilMRLVAVSLAFSLLAAPAFARRSSSKGPRAGGYCSKSAVGTTSTCKADGRGRARWTRK
Ga0209761_124332923300026313Grasslands SoilMRIFAAALALSLLAAPAFARTRSSSKGPRAGGYCAKSAVGTTSTDSKGNTLECKADKRGRAR
Ga0209686_103470123300026315SoilMRLVAVALAAALLAAPAFARRSPSKGPRAGGYCSKSAVGTTSTDKKGATLECKADRRGRARWTKK
Ga0209803_110371823300026332SoilMRIFAAALALSLLAAPAFARTRSSSKSPRAGGYCGKSAVGTTTTDSKGNALECKADKRGRARWTKK
Ga0209804_119802923300026335SoilMRTLAAALALSLLAAPAFARNRSSSKNPRAGGYCAKSAVGTTTTDSKGNALECKADKRGRARWAKK
Ga0257156_110400723300026498SoilMRMLAAALAFSLIAAPALARSKPKKGPKAGGYCSKSAVGTTSTDNKGATLACRADKNGTARWTRK
Ga0209808_105868723300026523SoilMRTLAAALALSLLAAPAFARNRSSSKNPRAGGYCAKSAVGTTTTDSKGNALECKADKRGRARWTKK
Ga0209690_101525723300026524SoilMRIFAAALALSLLAAPAFARTRSSSKSPRAGGYCAKSAVGTTTTDSKGNALECKADKRGRARWTKK
Ga0209690_112105823300026524SoilMRTLAAALALSLLAAPAFARTRNSSKSPRAGGYCAKSAVGTTTTDSKGNALECKADKRGRARWTKK
Ga0209806_105915733300026529SoilMRISAAALALSLLAAPAFARTRSSSKGPRAGGYCAKSAVGTTTTDSKGNTLECKADKRGRARWMKK
Ga0209160_121318123300026532SoilMRTLAAALALSLLAAPAFARTRNSSKSPRASGYCAKSAVGTTTTDSKGNALECKADKRGRARWTKK
Ga0209056_1003281663300026538SoilMRTLAAALALSLLAAPAFARTRSSSKSPRAGGYCAKSAVGTTTTDSKGNALECKADKRGRARWTKK
Ga0209376_103480413300026540SoilAVSLAFSLLAAPAFARRSSSKGPRAGGYCSKSAVGTTSTDKKGVTLECKADGRGRARWTR
Ga0209805_100593453300026542SoilMRTLAAALALSLLAASAFARNRSSSKNPRAGGYCAKSAVGTTTTDSKGNALECKADKRGRARWMKK
Ga0209156_1007278423300026547SoilMRTLAAALALSLLAASAFARNRSSSKNPRAGGYCAKSAVGTTTTDSKGNALECKADKRGRARWTKK
Ga0209474_1006120023300026550SoilMRLVAAALAFSLLAAPAFARRGSSKGPHAGGYCSKSAVGTTSTDKKGATLECKADGKGRARWTRK
Ga0209474_1046198423300026550SoilMRTLAAALALFLLAAPAFARTRSSSKSPRAGGYCAKSAVGTTTTDSKGNALECKADKRGRARWTKK
Ga0209076_112155013300027643Vadose Zone SoilRMRIFAAALALSLLAAPAFARTRSSSKGPRAGGYCAKSAVGTTTTDSKGNTLECKADKRGRARWKKK
Ga0209009_116418223300027667Forest SoilMRKLAAALALSLLAAPALARVRTSRKGPHAGGYCSKAAVGTTSTDSKGATLTCRADRRGRGRWTKK
Ga0209488_1017688823300027903Vadose Zone SoilMRTLAAALALALLAIPAWARARNSKGPRAGGYCSKNAVGTTSTDKKGVSLECKADRNGKPRWVRK
Ga0209488_1109129413300027903Vadose Zone SoilMRTLAAALALSLLAAPAFARTRNSSKSPRAGGYCAKSAVGTTTTDSKGNALECKADK
Ga0268264_1125170433300028381Switchgrass RhizosphereMRTFALLVAFSLFAAPAFARRSHAKKGPRPGGYCSKSAVGTTSTDSRGLPLECKGDSRGRARWTKK
Ga0137415_1024374033300028536Vadose Zone SoilMRTLAAALALSLLAAPAFARTRNSSKSPRAGGYCAKSAVGTTTTDSKGNALECKAGKRGRARWTKK
Ga0307504_1015262113300028792SoilMRMLAAALAFSLIAAPALARSKNAKKGPKAGGYCSKSAVGTTSTDNKGATLGCRADKNGTARWTRK
Ga0307284_1012107433300028799SoilMRTLSAVFALSLLAAPAFARRGNSSKGPHAGGYCPKSAVGTTSTDSKGVPLECKADRKGRARWTKK
Ga0307469_1018940323300031720Hardwood Forest SoilMRMLAAALAFSLIAAPALARSKNAKKGPKAGGYCSKSAVGTTSTDNKGATLACRADKNGTARWTRK
Ga0307473_1019964723300031820Hardwood Forest SoilMRMLAAALAFSLIPAPALARSKNAKKGPKAGGYCSKSAVGTTSTDHKGATLECRADKNGSARWTRK
Ga0307471_10078066613300032180Hardwood Forest SoilMRMLAAALAFSLIPAPALARSKNAKKGPKAGGYCSKSAVGTTSTDNKGATLACRADKNGTARWTRK
Ga0307471_10404520723300032180Hardwood Forest SoilMRTLSAALALVLLGAPAWARARNNSKGPRAGGYCSRSAVGTTSTDKKGVSLECKAGKNGKPRWVRK
Ga0335085_10005013163300032770SoilMRTLAAALALWLFAGPAFARVRSARKGPHAGGHCSKSAVGTTSTDSKGAALQCRADHKGRARWTRK
Ga0335082_1029752423300032782SoilMRTLAAALALSLFAGPAFARVRSARKGPHAGGHCSKSAVGTTSTDSKGAALQCRADHKGRARWTRK
Ga0335084_1048639923300033004SoilPSHRMHARPEEWMRTLAAALALWLFAGPAFARVRSARKGPHAGGHCSKSAVGTTSTDSKGAALQCRADHKGRARWTRK
Ga0316620_1009759323300033480SoilMRILAAALALSLLSAPAFARGRTSRKGPRAGGYCSKAAVGTTSTDSKGASLECRADRRGRTRWMKK

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Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
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