Metagenome / Metatranscriptome Family F062589

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F062589
Family Type	Metagenome / Metatranscriptome
Number of Sequences	130
Average Sequence Length	49 residues
Representative Sequence	RDPKVREQISALDYDIRGGTAKEFAEFVALDINRYKKLAADMGLAED
Number of Associated Samples	119
Number of Associated Scaffolds	130

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	3.08 %
% of genes near scaffold ends (potentially truncated)	93.08 %
% of genes from short scaffolds (< 2000 bps)	88.46 %
Associated GOLD sequencing projects	115
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.39

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (99.231 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (14.615 % of family members)
Environment Ontology (ENVO)	Unclassified (23.846 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (49.231 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 48.00% β-sheet: 0.00% Coil/Unstructured: 52.00%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.39
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.39
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 130 Family Scaffolds
PF13343	SBP_bac_6	43.85
PF01557	FAA_hydrolase	10.77
PF03401	TctC	1.54
PF12826	HHH_2	0.77
PF13175	AAA_15	0.77
PF00764	Arginosuc_synth	0.77
PF02900	LigB	0.77
PF00903	Glyoxalase	0.77

COG ID	Name	Functional Category	% Frequency in 130 Family Scaffolds
COG3181	Tripartite-type tricarboxylate transporter, extracytoplasmic receptor component TctC	Energy production and conversion [C]	1.54
COG0137	Argininosuccinate synthase	Amino acid transport and metabolism [E]	0.77

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	99.23 %
Unclassified	root	N/A	0.77 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	99.23 %
Unclassified	root	N/A	0.77 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	99.23 %
Unclassified	root	N/A	0.77 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	95.38 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.77 %
Unclassified	root	N/A	0.77 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	62.31 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	16.15 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	0.77 %
Unclassified	root	N/A	0.77 %

Name	Rank	Taxonomy	Distribution
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	10.77 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	2.31 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1.54 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.77 %
Unclassified	root	N/A	0.77 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium MarineAlpha11_Bin1	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium MarineAlpha11_Bin1	2.31 %
Comamonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	0.77 %
Hyphomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	0.77 %
Alcaligenaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Alcaligenaceae	0.77 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.77 %
Unclassified	root	N/A	0.77 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium MarineAlpha11_Bin1	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium MarineAlpha11_Bin1	2.31 %
Variovorax	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Variovorax	0.77 %
Rhodoplanes	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes	0.77 %
Alcaligenaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Alcaligenaceae	0.77 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.77 %
Unclassified	root	N/A	0.77 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium MarineAlpha11_Bin1	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium MarineAlpha11_Bin1	2.31 %
unclassified Rhodoplanes	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes	0.77 %
Variovorax	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Variovorax	0.77 %
Alcaligenaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Alcaligenaceae	0.77 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.77 %
Unclassified	root	N/A	0.77 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium MarineAlpha11_Bin1	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium MarineAlpha11_Bin1	2.31 %
Rhodoplanes sp. Z2-YC6860	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	0.77 %
Variovorax	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Variovorax	0.77 %
Alcaligenaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Alcaligenaceae	0.77 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.77 %
Unclassified	root	N/A	0.77 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000789\|JGI1027J11758_12596972	All Organisms → cellular organisms → Bacteria	512	Open in IMG/M
3300002568\|C688J35102_118929533	All Organisms → cellular organisms → Bacteria → Proteobacteria	614	Open in IMG/M
3300004114\|Ga0062593_101788463	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	675	Open in IMG/M
3300005148\|Ga0066819_1013882	All Organisms → cellular organisms → Bacteria	612	Open in IMG/M
3300005163\|Ga0066823_10147067	All Organisms → cellular organisms → Bacteria → Proteobacteria	519	Open in IMG/M
3300005166\|Ga0066674_10321527	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	727	Open in IMG/M
3300005169\|Ga0066810_10060012	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	765	Open in IMG/M
3300005177\|Ga0066690_10311111	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	1065	Open in IMG/M
3300005179\|Ga0066684_10197994	All Organisms → cellular organisms → Bacteria → Proteobacteria	1298	Open in IMG/M
3300005330\|Ga0070690_100190997	All Organisms → cellular organisms → Bacteria → Proteobacteria	1420	Open in IMG/M
3300005332\|Ga0066388_100904320	All Organisms → cellular organisms → Bacteria → Proteobacteria	1460	Open in IMG/M
3300005332\|Ga0066388_106809583	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	575	Open in IMG/M
3300005340\|Ga0070689_100720833	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	872	Open in IMG/M
3300005347\|Ga0070668_101847386	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	556	Open in IMG/M
3300005364\|Ga0070673_100453230	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	1154	Open in IMG/M
3300005367\|Ga0070667_100197571	All Organisms → cellular organisms → Bacteria → Proteobacteria	1784	Open in IMG/M
3300005440\|Ga0070705_101163301	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	634	Open in IMG/M
3300005451\|Ga0066681_10992401	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	501	Open in IMG/M
3300005540\|Ga0066697_10174049	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	1276	Open in IMG/M
3300005549\|Ga0070704_100599658	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	968	Open in IMG/M
3300005552\|Ga0066701_10223965	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1159	Open in IMG/M
3300005557\|Ga0066704_10311371	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1062	Open in IMG/M
3300005576\|Ga0066708_10055262	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	2236	Open in IMG/M
3300005618\|Ga0068864_100089151	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Alcaligenaceae	2717	Open in IMG/M
3300005713\|Ga0066905_102033493	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	533	Open in IMG/M
3300005764\|Ga0066903_100748101	All Organisms → cellular organisms → Bacteria → Proteobacteria	1735	Open in IMG/M
3300005764\|Ga0066903_108502019	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	523	Open in IMG/M
3300005981\|Ga0081538_10153321	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1039	Open in IMG/M
3300006031\|Ga0066651_10408188	All Organisms → cellular organisms → Bacteria → Proteobacteria	724	Open in IMG/M
3300006038\|Ga0075365_10734045	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	697	Open in IMG/M
3300006046\|Ga0066652_101215645	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	713	Open in IMG/M
3300006797\|Ga0066659_11097148	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	665	Open in IMG/M
3300006844\|Ga0075428_101941803	All Organisms → cellular organisms → Bacteria → Proteobacteria	611	Open in IMG/M
3300006846\|Ga0075430_100112301	All Organisms → cellular organisms → Bacteria → Proteobacteria	2272	Open in IMG/M
3300006871\|Ga0075434_102185623	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	557	Open in IMG/M
3300006903\|Ga0075426_10298199	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1179	Open in IMG/M
3300006904\|Ga0075424_101871550	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	634	Open in IMG/M
3300006953\|Ga0074063_10082785	All Organisms → cellular organisms → Bacteria → Proteobacteria	2623	Open in IMG/M
3300009090\|Ga0099827_10173315	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1779	Open in IMG/M
3300009094\|Ga0111539_11897162	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	691	Open in IMG/M
3300009094\|Ga0111539_12248629	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	633	Open in IMG/M
3300009100\|Ga0075418_11862093	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	655	Open in IMG/M
3300009100\|Ga0075418_13178140	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	500	Open in IMG/M
3300009101\|Ga0105247_10162964	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1478	Open in IMG/M
3300009162\|Ga0075423_12416571	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	573	Open in IMG/M
3300010333\|Ga0134080_10387064	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	644	Open in IMG/M
3300010336\|Ga0134071_10570064	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	590	Open in IMG/M
3300010337\|Ga0134062_10028906	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2172	Open in IMG/M
3300010360\|Ga0126372_11167478	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	792	Open in IMG/M
3300010360\|Ga0126372_12003983	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	626	Open in IMG/M
3300010361\|Ga0126378_12839854	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	553	Open in IMG/M
3300010362\|Ga0126377_12179308	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	630	Open in IMG/M
3300010371\|Ga0134125_11399815	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	762	Open in IMG/M
3300010373\|Ga0134128_10094863	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3393	Open in IMG/M
3300010403\|Ga0134123_10051621	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3099	Open in IMG/M
3300011106\|Ga0151489_1028654	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	608	Open in IMG/M
3300011270\|Ga0137391_10250489	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1535	Open in IMG/M
3300011271\|Ga0137393_11390977	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	591	Open in IMG/M
3300012189\|Ga0137388_10629358	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	997	Open in IMG/M
3300012212\|Ga0150985_109052542	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1499	Open in IMG/M
3300012362\|Ga0137361_10541269	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1069	Open in IMG/M
3300012363\|Ga0137390_10481949	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1215	Open in IMG/M
3300012908\|Ga0157286_10262495	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	614	Open in IMG/M
3300012913\|Ga0157298_10424486	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	513	Open in IMG/M
3300012917\|Ga0137395_10055163	All Organisms → cellular organisms → Bacteria → Proteobacteria	2516	Open in IMG/M
3300012927\|Ga0137416_12074219	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	522	Open in IMG/M
3300012929\|Ga0137404_10223622	All Organisms → cellular organisms → Bacteria → Proteobacteria	1605	Open in IMG/M
3300012929\|Ga0137404_12108549	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	527	Open in IMG/M
3300012929\|Ga0137404_12165615	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	520	Open in IMG/M
3300012944\|Ga0137410_10382622	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1131	Open in IMG/M
3300012955\|Ga0164298_10062506	All Organisms → cellular organisms → Bacteria → Proteobacteria	1839	Open in IMG/M
3300012988\|Ga0164306_10913088	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	717	Open in IMG/M
3300012989\|Ga0164305_11022294	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	704	Open in IMG/M
3300012989\|Ga0164305_11184836	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	661	Open in IMG/M
3300013306\|Ga0163162_10209063	All Organisms → cellular organisms → Bacteria → Proteobacteria	2081	Open in IMG/M
3300015359\|Ga0134085_10306374	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	699	Open in IMG/M
3300015371\|Ga0132258_11839771	All Organisms → cellular organisms → Bacteria → Proteobacteria	1525	Open in IMG/M
3300015372\|Ga0132256_100837167	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium MarineAlpha11_Bin1	1036	Open in IMG/M
3300015373\|Ga0132257_101323488	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	915	Open in IMG/M
3300018053\|Ga0184626_10392957	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	556	Open in IMG/M
3300018465\|Ga0190269_11109806	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	611	Open in IMG/M
3300018468\|Ga0066662_10731877	All Organisms → cellular organisms → Bacteria → Proteobacteria	949	Open in IMG/M
3300018468\|Ga0066662_12016679	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	604	Open in IMG/M
3300020002\|Ga0193730_1052469	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1175	Open in IMG/M
3300021363\|Ga0193699_10142880	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	982	Open in IMG/M
3300021560\|Ga0126371_10990637	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	982	Open in IMG/M
3300025899\|Ga0207642_10097407	All Organisms → cellular organisms → Bacteria	1468	Open in IMG/M
3300025915\|Ga0207693_10885108	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	686	Open in IMG/M
3300025916\|Ga0207663_10133624	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium MarineAlpha11_Bin1	1718	Open in IMG/M
3300025928\|Ga0207700_11298110	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	648	Open in IMG/M
3300025929\|Ga0207664_10528843	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium MarineAlpha11_Bin1	1057	Open in IMG/M
3300025936\|Ga0207670_11040545	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	690	Open in IMG/M
3300025939\|Ga0207665_10602414	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	858	Open in IMG/M
3300025960\|Ga0207651_10776259	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	848	Open in IMG/M
3300026078\|Ga0207702_10166591	All Organisms → cellular organisms → Bacteria → Proteobacteria	2017	Open in IMG/M
3300026330\|Ga0209473_1121354	Not Available	1083	Open in IMG/M
3300026361\|Ga0257176_1076360	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	544	Open in IMG/M
3300026490\|Ga0257153_1005558	All Organisms → cellular organisms → Bacteria → Proteobacteria	2476	Open in IMG/M
3300026551\|Ga0209648_10019808	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	5882	Open in IMG/M
3300026552\|Ga0209577_10479694	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	843	Open in IMG/M
3300026552\|Ga0209577_10623560	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	634	Open in IMG/M
3300027310\|Ga0207983_1011239	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1026	Open in IMG/M
3300027633\|Ga0208988_1053242	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1029	Open in IMG/M
3300027909\|Ga0209382_10118313	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Variovorax	3092	Open in IMG/M
3300028379\|Ga0268266_11476134	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	655	Open in IMG/M
3300028710\|Ga0307322_10108421	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	718	Open in IMG/M
3300028712\|Ga0307285_10013146	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1814	Open in IMG/M
3300028714\|Ga0307309_10028489	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1130	Open in IMG/M
3300028715\|Ga0307313_10038199	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1378	Open in IMG/M
3300028790\|Ga0307283_10170770	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	610	Open in IMG/M
3300028807\|Ga0307305_10234820	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	839	Open in IMG/M
3300028824\|Ga0307310_10344715	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	731	Open in IMG/M
3300028828\|Ga0307312_10630298	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	709	Open in IMG/M
3300028876\|Ga0307286_10372228	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	533	Open in IMG/M
3300028881\|Ga0307277_10477632	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	559	Open in IMG/M
3300031544\|Ga0318534_10043060	All Organisms → cellular organisms → Bacteria → Proteobacteria	2510	Open in IMG/M
3300031572\|Ga0318515_10269309	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	913	Open in IMG/M
3300031573\|Ga0310915_10573124	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	800	Open in IMG/M
3300031764\|Ga0318535_10012535	All Organisms → cellular organisms → Bacteria → Proteobacteria	3073	Open in IMG/M
3300031771\|Ga0318546_10873075	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	633	Open in IMG/M
3300031819\|Ga0318568_10907118	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	545	Open in IMG/M
3300031845\|Ga0318511_10149462	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1020	Open in IMG/M
3300031896\|Ga0318551_10118534	All Organisms → cellular organisms → Bacteria → Proteobacteria	1423	Open in IMG/M
3300031912\|Ga0306921_12284121	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	568	Open in IMG/M
3300032035\|Ga0310911_10517860	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	691	Open in IMG/M
3300032075\|Ga0310890_10744763	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	771	Open in IMG/M
3300032180\|Ga0307471_101251473	All Organisms → cellular organisms → Bacteria	905	Open in IMG/M
3300032180\|Ga0307471_103781082	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	535	Open in IMG/M
3300032261\|Ga0306920_102064883	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	796	Open in IMG/M
3300034151\|Ga0364935_0190907	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	657	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	79.23%
Host-Associated	Host-Associated	20.77%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	78.46%
Plants	Host-Associated → Plants	20.77%
Aquatic	Environmental → Aquatic	0.77%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	77.69%
Rhizosphere	Host-Associated → Plants → Rhizosphere	13.85%
Rhizoplane	Host-Associated → Plants → Rhizoplane	5.38%
Roots	Host-Associated → Plants → Roots	1.54%
Sediment	Environmental → Aquatic → Sediment	0.77%
Floodplain	Environmental → Terrestrial → Floodplain	0.77%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	64.62%
Loam	Environmental → Terrestrial → Soil → Loam	13.08%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	9.23%
Soil	Host-Associated → Plants → Rhizosphere → Soil	4.62%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	3.08%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	2.31%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.77%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	0.77%
Bulk Soil	Host-Associated → Plants → Roots → Bulk Soil	0.77%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.77%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	37.69%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	13.85%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	11.54%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	9.23%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	7.69%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	4.62%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	4.62%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	3.08%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	2.31%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.77%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.77%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	0.77%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.77%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	0.77%
Unclassified	Host-Associated → Plants → Roots → Bulk Soil → Unclassified	0.77%
Unclassified	Host-Associated → Plants → Roots → Rhizosphere → Unclassified	0.77%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	14.62%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	11.54%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	9.23%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	8.46%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	8.46%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	4.62%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	4.62%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	3.85%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	3.85%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	3.85%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	3.08%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	2.31%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	2.31%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	2.31%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.54%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.54%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.54%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.77%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.77%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	0.77%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.77%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.77%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.77%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	0.77%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	0.77%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.77%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.77%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.77%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.77%
Populus Endosphere	Host-Associated → Plants → Roots → Bulk Soil → Unclassified → Populus Endosphere	0.77%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Unclassified → Tabebuia Heterophylla Rhizosphere	0.77%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.77%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.77%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000789	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300002568	Grasslands soil microbial communities from Hopland, California, USA - 2	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300005148	Soil and rhizosphere microbial communities from Laval, Canada - mgLMA	Environmental	Open in IMG/M
3300005163	Soil and rhizosphere microbial communities from Laval, Canada - mgHMB	Environmental	Open in IMG/M
3300005166	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_123	Environmental	Open in IMG/M
3300005169	Soil and rhizosphere microbial communities from Laval, Canada - mgHPA	Environmental	Open in IMG/M
3300005177	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139	Environmental	Open in IMG/M
3300005179	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133	Environmental	Open in IMG/M
3300005330	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005340	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG	Environmental	Open in IMG/M
3300005347	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG	Host-Associated	Open in IMG/M
3300005364	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG	Host-Associated	Open in IMG/M
3300005367	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG	Host-Associated	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005451	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130	Environmental	Open in IMG/M
3300005540	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_146	Environmental	Open in IMG/M
3300005549	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG	Environmental	Open in IMG/M
3300005552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150	Environmental	Open in IMG/M
3300005557	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153	Environmental	Open in IMG/M
3300005576	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157	Environmental	Open in IMG/M
3300005618	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2	Host-Associated	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005981	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1	Host-Associated	Open in IMG/M
3300006031	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Angelo_100	Environmental	Open in IMG/M
3300006038	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5	Host-Associated	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006846	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006903	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300006953	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHMB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009101	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300010333	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010336	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09082015	Environmental	Open in IMG/M
3300010337	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09082015	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300011106	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLMC (Metagenome Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300012908	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S089-202R-1	Environmental	Open in IMG/M
3300012913	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S043-104R-2	Environmental	Open in IMG/M
3300012917	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012955	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MG	Environmental	Open in IMG/M
3300012988	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_242_MG	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300015359	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09182015	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300018053	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_60_b1	Environmental	Open in IMG/M
3300018465	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 IS	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300020002	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1a1	Environmental	Open in IMG/M
3300021363	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3c2	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300025899	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025929	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025936	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes)	Environmental	Open in IMG/M
3300025939	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025960	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026078	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026330	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133 (SPAdes)	Environmental	Open in IMG/M
3300026361	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NL-03-B	Environmental	Open in IMG/M
3300026490	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DW-10-A	Environmental	Open in IMG/M
3300026551	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)	Environmental	Open in IMG/M
3300026552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109 (SPAdes)	Environmental	Open in IMG/M
3300027310	Soil and rhizosphere microbial communities from Laval, Canada - mgHMB (SPAdes)	Environmental	Open in IMG/M
3300027633	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA Ref_M1 (SPAdes)	Environmental	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300028379	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300028710	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_380	Environmental	Open in IMG/M
3300028712	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_139	Environmental	Open in IMG/M
3300028714	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_196	Environmental	Open in IMG/M
3300028715	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_203	Environmental	Open in IMG/M
3300028790	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_122	Environmental	Open in IMG/M
3300028807	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_186	Environmental	Open in IMG/M
3300028824	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_197	Environmental	Open in IMG/M
3300028828	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_202	Environmental	Open in IMG/M
3300028876	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_140	Environmental	Open in IMG/M
3300028881	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_116	Environmental	Open in IMG/M
3300031544	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f26	Environmental	Open in IMG/M
3300031572	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f19	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031764	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f27	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031819	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f21	Environmental	Open in IMG/M
3300031845	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f18	Environmental	Open in IMG/M
3300031896	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f19	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300032035	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF170	Environmental	Open in IMG/M
3300032075	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D3	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300034151	Sediment microbial communities from East River floodplain, Colorado, United States - 2_s17	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI1027J11758_125969721	3300000789	Soil	WNELANAALRDPVVRDQIAGLDYEARGGTAKEFSDFVMLDISRYKHLAQDMGLGED*
C688J35102_1189295332	3300002568	Soil	DPKVRDQISALDYDIRGGSAKEFAEFIALDINRYKKLAADMGLAED*
Ga0062593_1017884631	3300004114	Soil	VREQISALDYDIRGGTAKEFAEFVALDINRYKKLAADMGLAED*
Ga0066819_10138822	3300005148	Soil	VTRWNELANEALRDPKVRDQITALDYDIRGGSAKEFAEFIALDINRYKKLAADMGLAED*
Ga0066823_101470671	3300005163	Soil	DAKVREQISALDYDIRGGTAGEFAAFVSLDISRYKRLAEDMGLAEE*
Ga0066674_103215272	3300005166	Soil	RAQISALDYEIRGGTPAEFANFMTLDISRYARLAQDMGLGED*
Ga0066810_100600121	3300005169	Soil	IVTRWNELANEALRDPKVRDQITALDYDIRGGSAKEFAEFIALDINRYNKLAADMGLAED
Ga0066690_103111111	3300005177	Soil	NAALRVAKVREQISALDYDIRGGTAGEFAAFVSLDISRYKRLAEDMGLAEE*
Ga0066684_101979942	3300005179	Soil	VARWNELANAALHDPKLRDQVSALDYEVRGGTAKEFAEFMMHDISRYKRLAEDMALAED*
Ga0070690_1001909971	3300005330	Switchgrass Rhizosphere	RDQITALDYDIRGGSAKEFAEFIALDINRYKKLAADMGLAED*
Ga0066388_1009043203	3300005332	Tropical Forest Soil	ALRESAVRDQIAALDYEARGGTAREFSDFIMLDISRYKHLAHDMGLGED*
Ga0066388_1068095831	3300005332	Tropical Forest Soil	RDQISALDYDIRGGTAGEFAAFVSLDISRYKKLAEDMGLAEE*
Ga0070689_1007208331	3300005340	Switchgrass Rhizosphere	KVREQISALDYDIRGGTAKEFAEFVALDINRYKKLAADMGLAED*
Ga0070668_1018473862	3300005347	Switchgrass Rhizosphere	DALRDAKVREQISALDYDIRGGTAKEFAEFVALDINRYKKLAADMGLAED*
Ga0070673_1004532302	3300005364	Switchgrass Rhizosphere	RDPKVREQISALDYDIRGGTAKEFAEFVALDINRYKKLAADMGLAED*
Ga0070667_1001975713	3300005367	Switchgrass Rhizosphere	TRWNELANDALRDPKVREQISALDYDIRGGTAKEFAEFVALDINRYKKLAADMGLAED*
Ga0070705_1011633011	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	DPKVREQISALDYDIRGGTAKEFAEFVALDINRYKKLAADMGLAED*
Ga0066681_109924012	3300005451	Soil	EAVVARWNELANAALLDAKLRDQVSALDYGVRGGSAKEFAEFMMHGISRYKRLAEDMALAED*
Ga0066697_101740491	3300005540	Soil	PRIVSNANAALRVAKVREQISALDYDIRGGTAGEFAAFVSLDISRYKRLAEDMGLAEE*
Ga0070704_1005996581	3300005549	Corn, Switchgrass And Miscanthus Rhizosphere	AIVTRWNELANEALRDPKVRDQITALDYDIRGGSAKEFAEFIALDINRYKKLAADMGLAED*
Ga0066701_102239652	3300005552	Soil	ALDYDIRGGTAGEFAAFVSLDISRYKRLAEDMGLAEE*
Ga0066704_103113712	3300005557	Soil	MPRLDYGIRGGTAGEFAAFVSLDISRYKRLAEDMGLAEE*
Ga0066708_100552623	3300005576	Soil	NELANAALRDAAVRDQIAGLDYEARGGTAREFSDFVILDISRYKHLAQDMGLGED*
Ga0068864_1000891511	3300005618	Switchgrass Rhizosphere	RWNELANEALRDPKVRDQITALDYDIRGGSAKEFAEFIALDINRYKKLAADMGLAED*
Ga0066905_1020334932	3300005713	Tropical Forest Soil	AVVARWNELANAALRDPKVRDQISALDYDIRGGTAGEFAAFVSLDISRYKRLAEDMGLAEE*
Ga0066903_1007481011	3300005764	Tropical Forest Soil	EQIATLDYDIRGGAIAEFTDYFTRDISRYKKLAEDMGLAED*
Ga0066903_1085020192	3300005764	Tropical Forest Soil	QISALDYDIRGGTAGEFAAFVSLDISRYKKLAEDMGLAEE*
Ga0081538_101533211	3300005981	Tabebuia Heterophylla Rhizosphere	ALDYDVRGGSARDFAGVLALDIGRYRKLAEDMGLAED*
Ga0066651_104081881	3300006031	Soil	KLRDQVSALDYEVRGGTAKEFAEFKMHDISRYKRLAEDMALAED*
Ga0075365_107340451	3300006038	Populus Endosphere	LANEALRDPKVRDQISALDYDIRGGSAKEFAEFIALDISRYKKLAADMGLAED*
Ga0066652_1012156452	3300006046	Soil	YDIRGGTAGEFAAFVSLDISRYKRLAEDMGLAEE*
Ga0066659_110971481	3300006797	Soil	EAMRDPKVRDQIAALDYDVRGGTAKAFADFIALDISRYRKLAVDMGLSED*
Ga0075428_1019418031	3300006844	Populus Rhizosphere	ELANEALRDPKVRDQITALDYDIRGGSAKEFAEFIALDINRYKKLAADMGLAED*
Ga0075430_1001123013	3300006846	Populus Rhizosphere	NDALGDTKLREQISALDYDVRGGSAREFAEFLVLDIGRYRKLAEDMGLAED*
Ga0075434_1021856232	3300006871	Populus Rhizosphere	LANEALRDPRTQEQIAALDYDARGGTVAQFADFLARDISRYKKLAEDMGLAED*
Ga0075426_102981991	3300006903	Populus Rhizosphere	ISALDYDIRGGTAKEFAEFVALDINRYKKLAADMGLAED*
Ga0075424_1018715502	3300006904	Populus Rhizosphere	SALDYDVRGGSVREFAEFLALDIGRYRKLAEDLGLAED*
Ga0074063_100827851	3300006953	Soil	DQITALDYDIRGGSAKEFAEFITLDINRYKKLAADMGLAED*
Ga0099827_101733151	3300009090	Vadose Zone Soil	DYDIRGGTAGEFAAFVSLDISRYKRLAEDMGLAEE*
Ga0111539_118971622	3300009094	Populus Rhizosphere	RDQITALDYDIRGGSAKEFAEFIALDISRYKKLAADMGLAED*
Ga0111539_122486291	3300009094	Populus Rhizosphere	LGDTKLREQISALDYDVRGGSAREFAEFLVLDIGRYRKLAEDMGLAED*
Ga0075418_118620931	3300009100	Populus Rhizosphere	KLREQISALDYDVRGGSAREFAEFLVLDIGRYRKLAEDMGLAED*
Ga0075418_131781402	3300009100	Populus Rhizosphere	RWNELVNDALGDPKLREQISALDYDVRGGSAREFAEFLALDIARYRKLAEDMGLAED*
Ga0105247_101629642	3300009101	Switchgrass Rhizosphere	WNELANEALRDPKVRDQITALDYDIRGGSAKEFAAFIALDINRYKKLAADMGLGED*
Ga0075423_124165712	3300009162	Populus Rhizosphere	LDYDVRGGSAKDFAEYLALDIGRYKKLAEDMGLTED*
Ga0134080_103870641	3300010333	Grasslands Soil	IAGLDYEARGGTAREFSDFIILDISRYKHLAQDMGLGED*
Ga0134071_105700641	3300010336	Grasslands Soil	GLDYEARGGTAREFSDFVILDISRYKHLAQDMGLGED*
Ga0134062_100289063	3300010337	Grasslands Soil	AALRDPTLRAQISALDYEIRGGTPAEFANFMTLDISRYARLAQDMGLGED*
Ga0126372_111674782	3300010360	Tropical Forest Soil	VVARWNELANAALNDPKLRDQVSALDYEVRGGTAKEFAEFMMHDLSRYKRLAEDMALAED
Ga0126372_120039831	3300010360	Tropical Forest Soil	IAALDYDIRGGTITEFTDYFTRDITRYKKLAEDMSLAED*
Ga0126378_128398542	3300010361	Tropical Forest Soil	SALDYDIRGGTAGEFAAFVSLDISRYKKLAEDMGLAEE*
Ga0126377_121793082	3300010362	Tropical Forest Soil	PESVVARWNELANAALNDPKLRDQVSALDYEVRGGTAKEFAEFMMHDISRYKRLAEGMGLAED*
Ga0134125_113998151	3300010371	Terrestrial Soil	QITALDYDIRGGSAKEFAEFIALDINRYKKLAADMGLGED*
Ga0134128_100948634	3300010373	Terrestrial Soil	LANDALRDPKVREQISALDYDIRGGTAKEFAEFVALDINRYKKLAADMGLAED*
Ga0134123_100516214	3300010403	Terrestrial Soil	VTRWNELANEALRDPKVRDQITALDYDIRGGSAKEFAAFIALDINRYKKLAADMGLGED*
Ga0151489_10286542	3300011106	Soil	TALDYDIRGGSAKEFAAFIALDINRYKKLAADMGLGED*
Ga0137391_102504891	3300011270	Vadose Zone Soil	VISRWNELANAALRDPVVRDQISALDYEARGGTAREFSDFVMLDISRYKQLAQDMGLGED
Ga0137393_113909771	3300011271	Vadose Zone Soil	QVSALDYDIRGGTSAQFADFLAQDISRYKKLAEDMGLAED*
Ga0137388_106293582	3300012189	Vadose Zone Soil	SAMDYDIRGGTPSEFIQFLASDISRCKKLADDMGFAED*
Ga0150985_1090525421	3300012212	Avena Fatua Rhizosphere	GRWNELVNESLNDPKLREQISALDYDIRGGTAGEFMRFLASDISRYKKLADDMGLAED*
Ga0137361_105412692	3300012362	Vadose Zone Soil	DAVVARWNELANAALRDPKVRDQISALDYDIRGGTAGEFAAFVSLDISRYKKLAEDMGLAEE*
Ga0137390_104819491	3300012363	Vadose Zone Soil	ALGDPKLREQISLMDYEVRGGTASAFMQFLTADISRYKKLADDMGLAED*
Ga0157286_102624952	3300012908	Soil	SRWNELANEALRDPKVRDQITALDYDIRGGSAKEFAEFITLDISRYKKLAADMGLAED*
Ga0157298_104244861	3300012913	Soil	QISALDYDIRGGTAKEFAEFVALDINRYKKLAADMGLAED*
Ga0137395_100551634	3300012917	Vadose Zone Soil	PRIVSNANAALRDAKVREQISALDYDIRGGTAGEFAAFVSLDISRYKRLAEDMGLAEE*
Ga0137416_120742191	3300012927	Vadose Zone Soil	SVVARWNQLVNEALGDPKLREQISLMDYEVRGGTASAFMQFLTADISRYKKLADDMGLAED*
Ga0137404_102236221	3300012929	Vadose Zone Soil	DPTLRAQISALDYEIRGGTPAEFADFMTLDITRYTRLAQDMGLGED*
Ga0137404_121085491	3300012929	Vadose Zone Soil	LREQIAALDYDIRGGTAAQFADFIAADISRYKKLAEDMGLAED*
Ga0137404_121656152	3300012929	Vadose Zone Soil	RWNELTNEALRDPKLRDQISALDYDIRGGTVTEFADFLTADINRYKKLAEDMGLAED*
Ga0137410_103826221	3300012944	Vadose Zone Soil	DYDIRGGTAKDFADFVALDIGRYKKLAADMGLAED*
Ga0164298_100625063	3300012955	Soil	RWNELANEALRDPKVRDQITALDYDIRGGTAKEFAEFVALDINRYKKLAADMGLAED*
Ga0164306_109130881	3300012988	Soil	RDPKVRDQITALDYDIRGGSAKEFAEFIALDINRYKKLAADMGLAED*
Ga0164305_110222941	3300012989	Soil	DPKVRDQITALDYDIRGGSAKEFAEFIALDINRYKKLAADMGLAED*
Ga0164305_111848362	3300012989	Soil	VREQISALDYDIRGGTAGEFAAFVSLDISRYKRPAEDMGLAEE*
Ga0163162_102090633	3300013306	Switchgrass Rhizosphere	ELANDALRDPKVREQISALDYDIRGGTAKEFAEFVALDINRYKKLAADMGLAED*
Ga0134085_103063742	3300015359	Grasslands Soil	QISALDYDIRGGTAREFAQFFTLDISRYKKLAEDMGLAED*
Ga0132258_118397713	3300015371	Arabidopsis Rhizosphere	ARWNELTNEAMRDPTVRAQIFALDYDIRGGSAKEFADFMALDIGRYKKLAEDMGLAED*
Ga0132256_1008371671	3300015372	Arabidopsis Rhizosphere	ELANAALRDPKLRDQVSALDYEVRGGTAEEFAEFMMHDISRYKRLAEDMALIED*
Ga0132257_1013234882	3300015373	Arabidopsis Rhizosphere	LREQISALDYDVRGGAVREFAEFLSLDIGRYRKLAEDLGLAED*
Ga0184626_103929572	3300018053	Groundwater Sediment	VNEALRDPKVREQISALDYDIRGGTAREFTDFFTSDMSRYRKLAEDMGLSED
Ga0190269_111098062	3300018465	Soil	LDYDVRGGTAPQFADFIAVDISRYKKLAEDMGLAED
Ga0066662_107318772	3300018468	Grasslands Soil	VCATPRCGKLRDQVSALDYEVRGGTAKEFSEFMMHDISRYKRLAEDMALAED
Ga0066662_120166792	3300018468	Grasslands Soil	SALDYEIRGGTPAEFANFMTLDISRYTRLAQDMGLGED
Ga0193730_10524691	3300020002	Soil	NELANDALRDPKVRDQISALDYDIRGGTAKDFADFVALDIGRYKKLAADMGLAED
Ga0193699_101428801	3300021363	Soil	LANDALRDPKVRDQISALDYDIRGGTAKDFADFVALDIGRYKKLAADMGLAED
Ga0126371_109906371	3300021560	Tropical Forest Soil	LRDAKVREQISALDYDSRGGTAGEFAAFIRLDISRYKRLAEDMGLAEE
Ga0207642_100974071	3300025899	Miscanthus Rhizosphere	KLRDQVSTLDYEVRGGTAKEFADFVMHDISRYKRLAEDMGLAED
Ga0207693_108851082	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	PKLRDQVSTLDYEVRGGTAKEFADFVMHDISRYKRLAEDMGLAED
Ga0207663_101336242	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	ELANTALRDPKLRDQVSTLDYEVRGGTAKEFADFVMHDISRYKRLAEDMGLAED
Ga0207700_112981102	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	VRDQITALDYDIRGGSAKEFAEFIALDINRYKKLAADMGLAE
Ga0207664_105288431	3300025929	Agricultural Soil	VVARWNELANTALRDPKLRDQVSTLDYEVRGGTAKEFADFVMHDISRYKRLAEDMGLAED
Ga0207670_110405452	3300025936	Switchgrass Rhizosphere	RDAKVREQISALDYDIRGGTAKEFAEFVALDINRYKKLAADMGLAED
Ga0207665_106024141	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	IVSNANAALRDDKVREQISALDYDIRGGTAGEFAAFVSLDISRYKRLAEDMGLAEE
Ga0207651_107762592	3300025960	Switchgrass Rhizosphere	RDPKVREQISALDYDIRGGTAKEFAEFVALDINRYKKLAADMGLAED
Ga0207702_101665911	3300026078	Corn Rhizosphere	RDPKVRDQITALDYDIRGGSAKEFAEFIALDINRYKKLAADMGLAED
Ga0209473_11213542	3300026330	Soil	VARWNELANAALHDAKLRDQVSALDYEVRGGTAKEFAEFMMHDISRYKRLAEDMALAED
Ga0257176_10763602	3300026361	Soil	VVRDQISALDYEARGGTAREFSDFVMLDISRYKQLAQDMGLGED
Ga0257153_10055581	3300026490	Soil	QISALDYEARGGTAREFSDFVMLDISRYKQLAQDMGLGED
Ga0209648_100198086	3300026551	Grasslands Soil	RWNELANAALRDPVVRDQISALDYEARGGTAREFSDFVMLDISRYKQLAQDMGLGED
Ga0209577_104796941	3300026552	Soil	AALRDAAVRDQIAGLDYEARGGTAREFSDFVILDISRYKHLAQDMGLGED
Ga0209577_106235602	3300026552	Soil	REQVSALDYEVRGGTSKEFADFMMHDINRYKRLAEDMGLAEE
Ga0207983_10112392	3300027310	Soil	LRDPKVRDQITALDYDIRGGSAKEFAEFIALDINRYKKLAADMGLAED
Ga0208988_10532421	3300027633	Forest Soil	TRWNELANDALRDPKVRDQISALDYDIRGGTPREFAEFVALDISRYKKLAADMGLAED
Ga0209382_101183133	3300027909	Populus Rhizosphere	GQISALDYEIRGGTPTEFAAFMTLDISRYTRLAQDMGLGED
Ga0268266_114761341	3300028379	Switchgrass Rhizosphere	SALDYDIRGGSAKEFAEFIALDINRYKKLAADMGLAED
Ga0307322_101084211	3300028710	Soil	LDYDIRGGSAKEFADFIALDISRYKKLAADMGLAED
Ga0307285_100131462	3300028712	Soil	VRDQITALDYDIRGGSAKEFAEFIALDINRYKKLAADMGLAED
Ga0307309_100284892	3300028714	Soil	KVRDQISALDYDIRGGTAKDFADFVALDIGRYKKLAADMGLAED
Ga0307313_100381991	3300028715	Soil	TNDALRDPKVRDQISALDYDIRGGTAKDFADFVALDIGRYKKLAADMGLAED
Ga0307283_101707702	3300028790	Soil	LRDPKVRDQITALDYDIRGGSAKEFADFIALDISRYKKLAADMGLAED
Ga0307305_102348202	3300028807	Soil	VTRWNQLANDALRDPKVRDQISALDYDIRGGTAKDFADFVALDIGRYKKLAADMGLAED
Ga0307310_103447152	3300028824	Soil	DAIVTRWNELTNDALRDPKVRDQISALDYDIRGGTAKDFADFVALDIGRYKKLAADMGLAED
Ga0307312_106302981	3300028828	Soil	LRDPKVRDQISALDYDMRGGTAKDFANFIALDIGRYKKLAADMGLAED
Ga0307286_103722281	3300028876	Soil	ELANEALRDPKVRDQITALDYDIRGGSAKEFADFIALDISRYKKLAADMGLAED
Ga0307277_104776322	3300028881	Soil	MRDPKVRDQISALDYDIRGGTASAFAAFLTLDISRYKKLAEAMGLAEE
Ga0318534_100430604	3300031544	Soil	RWNELANAALRDSKVRDQISALDYDIRGGTAGEFAAFVSLDISRYKKLAEDMGLAEE
Ga0318515_102693092	3300031572	Soil	RDPKVRDQISALDYDIRGGTAGEFAAFVSLDISRYKKLAEDMGLAEE
Ga0310915_105731242	3300031573	Soil	VARWNELANAALRDSKVRDQISALDYDIRGGTAGEFAAFVSLDISRYKKLAEDMGLAEE
Ga0318535_100125354	3300031764	Soil	ELANAALRDPKVRDQTSALDYDIRGGTAGEFAAFVSLDISRYKKLAEDMGLAEE
Ga0318546_108730752	3300031771	Soil	RDAKVREQISALDYDIRGGTTGEFAAFVSLDISRYKRLAEDMGLAEE
Ga0318568_109071182	3300031819	Soil	LANAALRDPKVRDQISALDYDIRGGTAGEFAAFVSLDISRYKKLAEDMGLAEE
Ga0318511_101494622	3300031845	Soil	PDALVARWNELANAALRDAKVREQISALDYDIRGGTTGEFAAFVSLDISRYKRLAEDMGLAEE
Ga0318551_101185341	3300031896	Soil	DQISALDYDIRGGTAGEFAAFVSLDISRYKKLAEDMGLAEE
Ga0306921_122841212	3300031912	Soil	DYDVRGGTPKEFADFIGLDIGRYRKLAEAMGLAED
Ga0310911_105178602	3300032035	Soil	ELANAALRDAKVREQISALDYDIRGGTTGEFAAFVSLDISRYKRLAEDMGLAEE
Ga0310890_107447632	3300032075	Soil	PKIRDQISALDYDIRGGSAKEFAEFIALDINRYKKLAADMGLAED
Ga0307471_1012514732	3300032180	Hardwood Forest Soil	VNEALRDRTLREQIVVLDYEVRGGSAEFRDFIALDISRYKKLAADMSLAED
Ga0307471_1037810821	3300032180	Hardwood Forest Soil	VRPGSAGWHAEAVVARWNELANAALRDPKLREQVSALDYEVRGGTAKEFADFMMHDISRYKRLAED
Ga0306920_1020648832	3300032261	Soil	NAVVARWNELANAALRDPKVRDQISALDYDIRGGTAGEFAAFVSLDISRYKKLAEDMGLAEE
Ga0364935_0190907_499_657	3300034151	Sediment	ANEALRDPKVRDQITALDYDIRGGSAKEFAEFIALDINRYKKLAADMGLAED

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F062589

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences