NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome Family F062550

Metagenome Family F062550

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F062550
Family Type Metagenome
Number of Sequences 130
Average Sequence Length 62 residues
Representative Sequence VRNFSIFEQALKFSGVDHIENLGEIASLARRDFVERESFICHTTTASVEYGCLMIENAI
Number of Associated Samples 104
Number of Associated Scaffolds 130

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 96.15 %
% of genes near scaffold ends (potentially truncated) 98.46 %
% of genes from short scaffolds (< 2000 bps) 99.23 %
Associated GOLD sequencing projects 91
AlphaFold2 3D model prediction Yes
3D model pTM-score0.41

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Bacteria (99.231 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere
(12.308 % of family members)
Environment Ontology (ENVO) Unclassified
(55.385 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(71.538 % of family members)


 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      

 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 50.57%    β-sheet: 0.00%    Coil/Unstructured: 49.43%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.41
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 130 Family Scaffolds
PF02875Mur_ligase_C 24.62
PF08245Mur_ligase_M 10.00
PF00507Oxidored_q4 0.77

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 130 Family Scaffolds
COG0838NADH:ubiquinone oxidoreductase subunit 3 (chain A)Energy production and conversion [C] 0.77

 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms99.23 %
UnclassifiedrootN/A0.77 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300000789|JGI1027J11758_12660003All Organisms → cellular organisms → Bacteria592Open in IMG/M
3300000956|JGI10216J12902_117721975All Organisms → cellular organisms → Bacteria630Open in IMG/M
3300001990|JGI24737J22298_10075713All Organisms → cellular organisms → Bacteria1003Open in IMG/M
3300004114|Ga0062593_101189722All Organisms → cellular organisms → Bacteria799Open in IMG/M
3300004157|Ga0062590_101535837All Organisms → cellular organisms → Bacteria670Open in IMG/M
3300004479|Ga0062595_100262388All Organisms → cellular organisms → Bacteria1131Open in IMG/M
3300004480|Ga0062592_102071996All Organisms → cellular organisms → Bacteria564Open in IMG/M
3300004643|Ga0062591_100729910All Organisms → cellular organisms → Bacteria901Open in IMG/M
3300004643|Ga0062591_102077646All Organisms → cellular organisms → Bacteria588Open in IMG/M
3300005093|Ga0062594_101492120All Organisms → cellular organisms → Bacteria693Open in IMG/M
3300005330|Ga0070690_100432067All Organisms → cellular organisms → Bacteria973Open in IMG/M
3300005334|Ga0068869_101312179All Organisms → cellular organisms → Bacteria639Open in IMG/M
3300005334|Ga0068869_102106729All Organisms → cellular organisms → Bacteria507Open in IMG/M
3300005334|Ga0068869_102129279All Organisms → cellular organisms → Bacteria504Open in IMG/M
3300005345|Ga0070692_10147311All Organisms → cellular organisms → Bacteria1338Open in IMG/M
3300005345|Ga0070692_10785296All Organisms → cellular organisms → Bacteria649Open in IMG/M
3300005438|Ga0070701_11074029All Organisms → cellular organisms → Bacteria565Open in IMG/M
3300005440|Ga0070705_101461024All Organisms → cellular organisms → Bacteria572Open in IMG/M
3300005444|Ga0070694_100914637All Organisms → cellular organisms → Bacteria725Open in IMG/M
3300005444|Ga0070694_101504212All Organisms → cellular organisms → Bacteria570Open in IMG/M
3300005539|Ga0068853_101276103All Organisms → cellular organisms → Bacteria710Open in IMG/M
3300005543|Ga0070672_101950044All Organisms → cellular organisms → Bacteria529Open in IMG/M
3300005546|Ga0070696_101895639All Organisms → cellular organisms → Bacteria516Open in IMG/M
3300005547|Ga0070693_100459659All Organisms → cellular organisms → Bacteria895Open in IMG/M
3300005547|Ga0070693_101271930All Organisms → cellular organisms → Bacteria568Open in IMG/M
3300005549|Ga0070704_101313526All Organisms → cellular organisms → Bacteria662Open in IMG/M
3300005614|Ga0068856_101065543All Organisms → cellular organisms → Bacteria826Open in IMG/M
3300005614|Ga0068856_102363095All Organisms → cellular organisms → Bacteria539Open in IMG/M
3300005616|Ga0068852_102114228All Organisms → cellular organisms → Bacteria585Open in IMG/M
3300005617|Ga0068859_101163466All Organisms → cellular organisms → Bacteria849Open in IMG/M
3300005618|Ga0068864_100339155All Organisms → cellular organisms → Bacteria1416Open in IMG/M
3300005618|Ga0068864_100410882All Organisms → cellular organisms → Bacteria1288Open in IMG/M
3300005618|Ga0068864_102054784All Organisms → cellular organisms → Bacteria578Open in IMG/M
3300005718|Ga0068866_11279717All Organisms → cellular organisms → Bacteria532Open in IMG/M
3300005719|Ga0068861_100890381All Organisms → cellular organisms → Bacteria842Open in IMG/M
3300005840|Ga0068870_10716881All Organisms → cellular organisms → Bacteria692Open in IMG/M
3300005841|Ga0068863_101048671All Organisms → cellular organisms → Bacteria819Open in IMG/M
3300005841|Ga0068863_102174973All Organisms → cellular organisms → Bacteria565Open in IMG/M
3300005842|Ga0068858_101149245All Organisms → cellular organisms → Bacteria763Open in IMG/M
3300005844|Ga0068862_102386485All Organisms → cellular organisms → Bacteria541Open in IMG/M
3300005985|Ga0081539_10190860All Organisms → cellular organisms → Bacteria954Open in IMG/M
3300006049|Ga0075417_10348880All Organisms → cellular organisms → Bacteria725Open in IMG/M
3300006058|Ga0075432_10067304All Organisms → cellular organisms → Bacteria1283Open in IMG/M
3300006806|Ga0079220_10156626All Organisms → cellular organisms → Bacteria1264Open in IMG/M
3300006845|Ga0075421_101834729All Organisms → cellular organisms → Bacteria651Open in IMG/M
3300006852|Ga0075433_11767209All Organisms → cellular organisms → Bacteria532Open in IMG/M
3300006853|Ga0075420_101515200All Organisms → cellular organisms → Bacteria575Open in IMG/M
3300006871|Ga0075434_101790552All Organisms → cellular organisms → Bacteria621Open in IMG/M
3300006871|Ga0075434_102305859All Organisms → cellular organisms → Bacteria541Open in IMG/M
3300006876|Ga0079217_10917005All Organisms → cellular organisms → Bacteria628Open in IMG/M
3300006894|Ga0079215_10899671All Organisms → cellular organisms → Bacteria634Open in IMG/M
3300006894|Ga0079215_11547127All Organisms → cellular organisms → Bacteria525Open in IMG/M
3300006903|Ga0075426_11228561All Organisms → cellular organisms → Bacteria568Open in IMG/M
3300006918|Ga0079216_10128307All Organisms → cellular organisms → Bacteria1283Open in IMG/M
3300006969|Ga0075419_11357391All Organisms → cellular organisms → Bacteria529Open in IMG/M
3300009011|Ga0105251_10587049All Organisms → cellular organisms → Bacteria528Open in IMG/M
3300009093|Ga0105240_10531686All Organisms → cellular organisms → Bacteria1303Open in IMG/M
3300009101|Ga0105247_11056621All Organisms → cellular organisms → Bacteria638Open in IMG/M
3300009101|Ga0105247_11144337All Organisms → cellular organisms → Bacteria616Open in IMG/M
3300009148|Ga0105243_10394633All Organisms → cellular organisms → Bacteria1283Open in IMG/M
3300009156|Ga0111538_13441422All Organisms → cellular organisms → Bacteria550Open in IMG/M
3300009162|Ga0075423_12240436All Organisms → cellular organisms → Bacteria594Open in IMG/M
3300009174|Ga0105241_12232159All Organisms → cellular organisms → Bacteria543Open in IMG/M
3300009177|Ga0105248_11945635All Organisms → cellular organisms → Bacteria668Open in IMG/M
3300009545|Ga0105237_11665299All Organisms → cellular organisms → Bacteria645Open in IMG/M
3300009551|Ga0105238_12462394All Organisms → cellular organisms → Bacteria556Open in IMG/M
3300009553|Ga0105249_11514224All Organisms → cellular organisms → Bacteria743Open in IMG/M
3300009553|Ga0105249_12505455All Organisms → cellular organisms → Bacteria588Open in IMG/M
3300009553|Ga0105249_13504349All Organisms → cellular organisms → Bacteria505Open in IMG/M
3300009840|Ga0126313_11795918All Organisms → cellular organisms → Bacteria513Open in IMG/M
3300010041|Ga0126312_11154468All Organisms → cellular organisms → Bacteria570Open in IMG/M
3300010397|Ga0134124_10889481All Organisms → cellular organisms → Bacteria896Open in IMG/M
3300010397|Ga0134124_12965231All Organisms → cellular organisms → Bacteria518Open in IMG/M
3300010399|Ga0134127_10006814All Organisms → cellular organisms → Bacteria → Terrabacteria group → Armatimonadetes → Fimbriimonadia → Fimbriimonadales → Fimbriimonadaceae → Fimbriimonas → Fimbriimonas ginsengisoli8330Open in IMG/M
3300010400|Ga0134122_11722820All Organisms → cellular organisms → Bacteria655Open in IMG/M
3300010401|Ga0134121_11208415All Organisms → cellular organisms → Bacteria756Open in IMG/M
3300010401|Ga0134121_13059452All Organisms → cellular organisms → Bacteria515Open in IMG/M
3300010403|Ga0134123_11408478All Organisms → cellular organisms → Bacteria737Open in IMG/M
3300010403|Ga0134123_12268618All Organisms → cellular organisms → Bacteria606Open in IMG/M
3300011119|Ga0105246_12455284All Organisms → cellular organisms → Bacteria512Open in IMG/M
3300012022|Ga0120191_10121913All Organisms → cellular organisms → Bacteria565Open in IMG/M
3300012951|Ga0164300_10368729All Organisms → cellular organisms → Bacteria777Open in IMG/M
3300013100|Ga0157373_10670769All Organisms → cellular organisms → Bacteria758Open in IMG/M
3300013307|Ga0157372_11673014All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → Pyrinomonas → Pyrinomonas methylaliphatogenes732Open in IMG/M
3300014325|Ga0163163_12182358All Organisms → cellular organisms → Bacteria613Open in IMG/M
3300014326|Ga0157380_11793744All Organisms → cellular organisms → Bacteria673Open in IMG/M
3300014487|Ga0182000_10341548All Organisms → cellular organisms → Bacteria641Open in IMG/M
3300014968|Ga0157379_10304816All Organisms → cellular organisms → Bacteria1452Open in IMG/M
3300018422|Ga0190265_12275081All Organisms → cellular organisms → Bacteria644Open in IMG/M
3300025900|Ga0207710_10417108All Organisms → cellular organisms → Bacteria690Open in IMG/M
3300025904|Ga0207647_10713781All Organisms → cellular organisms → Bacteria545Open in IMG/M
3300025908|Ga0207643_10607657All Organisms → cellular organisms → Bacteria704Open in IMG/M
3300025911|Ga0207654_11047454All Organisms → cellular organisms → Bacteria594Open in IMG/M
3300025911|Ga0207654_11361082All Organisms → cellular organisms → Bacteria518Open in IMG/M
3300025911|Ga0207654_11418145All Organisms → cellular organisms → Bacteria506Open in IMG/M
3300025926|Ga0207659_11203198All Organisms → cellular organisms → Bacteria651Open in IMG/M
3300025927|Ga0207687_11304065All Organisms → cellular organisms → Bacteria624Open in IMG/M
3300025927|Ga0207687_11866719All Organisms → cellular organisms → Bacteria514Open in IMG/M
3300025930|Ga0207701_10932557All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium726Open in IMG/M
3300025936|Ga0207670_10460729Not Available1026Open in IMG/M
3300025938|Ga0207704_10506661All Organisms → cellular organisms → Bacteria974Open in IMG/M
3300025940|Ga0207691_11755836All Organisms → cellular organisms → Bacteria501Open in IMG/M
3300025941|Ga0207711_12044033All Organisms → cellular organisms → Bacteria516Open in IMG/M
3300025942|Ga0207689_10472282All Organisms → cellular organisms → Bacteria1049Open in IMG/M
3300025945|Ga0207679_11234210All Organisms → cellular organisms → Bacteria686Open in IMG/M
3300025960|Ga0207651_10916655All Organisms → cellular organisms → Bacteria781Open in IMG/M
3300025981|Ga0207640_11163383All Organisms → cellular organisms → Bacteria685Open in IMG/M
3300026035|Ga0207703_11131981All Organisms → cellular organisms → Bacteria752Open in IMG/M
3300026041|Ga0207639_11768552All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Sinobacteraceae → Stagnimonas → Stagnimonas aquatica579Open in IMG/M
3300026067|Ga0207678_11535331All Organisms → cellular organisms → Bacteria587Open in IMG/M
3300026095|Ga0207676_11132283All Organisms → cellular organisms → Bacteria774Open in IMG/M
3300026095|Ga0207676_11404556All Organisms → cellular organisms → Bacteria694Open in IMG/M
3300026095|Ga0207676_11466271All Organisms → cellular organisms → Bacteria679Open in IMG/M
3300026116|Ga0207674_11019033All Organisms → cellular organisms → Bacteria797Open in IMG/M
3300026142|Ga0207698_11565192All Organisms → cellular organisms → Bacteria674Open in IMG/M
3300027880|Ga0209481_10442733All Organisms → cellular organisms → Bacteria668Open in IMG/M
3300027886|Ga0209486_10238108All Organisms → cellular organisms → Bacteria1046Open in IMG/M
3300027909|Ga0209382_11726008All Organisms → cellular organisms → Bacteria613Open in IMG/M
3300028380|Ga0268265_11535220All Organisms → cellular organisms → Bacteria670Open in IMG/M
3300028380|Ga0268265_11880484All Organisms → cellular organisms → Bacteria605Open in IMG/M
3300028380|Ga0268265_12417524All Organisms → cellular organisms → Bacteria532Open in IMG/M
3300030511|Ga0268241_10161176All Organisms → cellular organisms → Bacteria553Open in IMG/M
3300031548|Ga0307408_102410742All Organisms → cellular organisms → Bacteria511Open in IMG/M
3300031716|Ga0310813_10291787All Organisms → cellular organisms → Bacteria1373Open in IMG/M
3300032002|Ga0307416_101649867All Organisms → cellular organisms → Bacteria746Open in IMG/M
3300032002|Ga0307416_103027552All Organisms → cellular organisms → Bacteria562Open in IMG/M
3300032005|Ga0307411_11884953All Organisms → cellular organisms → Bacteria556Open in IMG/M
3300032157|Ga0315912_10191697All Organisms → cellular organisms → Bacteria1603Open in IMG/M
3300032421|Ga0310812_10311319All Organisms → cellular organisms → Bacteria701Open in IMG/M
3300033475|Ga0310811_10678785All Organisms → cellular organisms → Bacteria1004Open in IMG/M


 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere12.31%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere10.00%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere7.69%
Corn RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere7.69%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere6.92%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil6.15%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere6.15%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil5.38%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere5.38%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil4.62%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil4.62%
RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere3.08%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere3.08%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere2.31%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil1.54%
Serpentine SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil1.54%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil1.54%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere1.54%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere1.54%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere1.54%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere1.54%
TerrestrialEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial0.77%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Corn, Switchgrass And Miscanthus Rhizosphere0.77%
Tabebuia Heterophylla RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere0.77%
Switchgrass RhizosphereHost-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere0.77%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere0.77%

Visualization
Powered by ApexCharts



Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300000789Soil microbial communities from Great Prairies - Iowa, Native Prairie soilEnvironmentalOpen in IMG/M
3300000956Soil microbial communities from Great Prairies - Kansas, Native Prairie soilEnvironmentalOpen in IMG/M
3300001990Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3Host-AssociatedOpen in IMG/M
3300004114Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5EnvironmentalOpen in IMG/M
3300004157Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2EnvironmentalOpen in IMG/M
3300004479Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAsEnvironmentalOpen in IMG/M
3300004480Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4EnvironmentalOpen in IMG/M
3300004643Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3EnvironmentalOpen in IMG/M
3300005093Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All BlocksEnvironmentalOpen in IMG/M
3300005330Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaGEnvironmentalOpen in IMG/M
3300005334Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2Host-AssociatedOpen in IMG/M
3300005345Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaGEnvironmentalOpen in IMG/M
3300005438Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaGEnvironmentalOpen in IMG/M
3300005440Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaGEnvironmentalOpen in IMG/M
3300005444Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaGEnvironmentalOpen in IMG/M
3300005539Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2Host-AssociatedOpen in IMG/M
3300005543Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaGHost-AssociatedOpen in IMG/M
3300005546Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaGEnvironmentalOpen in IMG/M
3300005547Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaGEnvironmentalOpen in IMG/M
3300005549Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaGEnvironmentalOpen in IMG/M
3300005614Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2Host-AssociatedOpen in IMG/M
3300005616Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2Host-AssociatedOpen in IMG/M
3300005617Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2Host-AssociatedOpen in IMG/M
3300005618Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2Host-AssociatedOpen in IMG/M
3300005718Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2Host-AssociatedOpen in IMG/M
3300005719Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2Host-AssociatedOpen in IMG/M
3300005840Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2Host-AssociatedOpen in IMG/M
3300005841Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2Host-AssociatedOpen in IMG/M
3300005842Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2Host-AssociatedOpen in IMG/M
3300005844Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2Host-AssociatedOpen in IMG/M
3300005985Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2Host-AssociatedOpen in IMG/M
3300006049Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1Host-AssociatedOpen in IMG/M
3300006058Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1Host-AssociatedOpen in IMG/M
3300006806Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100EnvironmentalOpen in IMG/M
3300006845Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5Host-AssociatedOpen in IMG/M
3300006852Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2Host-AssociatedOpen in IMG/M
3300006853Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD4Host-AssociatedOpen in IMG/M
3300006871Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3Host-AssociatedOpen in IMG/M
3300006876Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS200EnvironmentalOpen in IMG/M
3300006894Agricultural soil microbial communities from Utah to study Nitrogen management - NC ControlEnvironmentalOpen in IMG/M
3300006903Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5Host-AssociatedOpen in IMG/M
3300006918Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS100EnvironmentalOpen in IMG/M
3300006969Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3Host-AssociatedOpen in IMG/M
3300009011Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaGHost-AssociatedOpen in IMG/M
3300009093Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaGHost-AssociatedOpen in IMG/M
3300009101Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaGHost-AssociatedOpen in IMG/M
3300009148Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaGHost-AssociatedOpen in IMG/M
3300009156Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)Host-AssociatedOpen in IMG/M
3300009162Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2Host-AssociatedOpen in IMG/M
3300009174Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaGHost-AssociatedOpen in IMG/M
3300009177Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaGHost-AssociatedOpen in IMG/M
3300009545Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaGHost-AssociatedOpen in IMG/M
3300009551Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaGHost-AssociatedOpen in IMG/M
3300009553Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaGHost-AssociatedOpen in IMG/M
3300009840Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105AEnvironmentalOpen in IMG/M
3300010041Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot104AEnvironmentalOpen in IMG/M
3300010397Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4EnvironmentalOpen in IMG/M
3300010399Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3EnvironmentalOpen in IMG/M
3300010400Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2EnvironmentalOpen in IMG/M
3300010401Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1EnvironmentalOpen in IMG/M
3300010403Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3EnvironmentalOpen in IMG/M
3300011119Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaGHost-AssociatedOpen in IMG/M
3300012022Terrestrial microbial communites from a soil warming plot in Okalahoma, USA - C6EnvironmentalOpen in IMG/M
3300012951Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MGEnvironmentalOpen in IMG/M
3300013100Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaGHost-AssociatedOpen in IMG/M
3300013307Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaGHost-AssociatedOpen in IMG/M
3300014325Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaGHost-AssociatedOpen in IMG/M
3300014326Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaGHost-AssociatedOpen in IMG/M
3300014487Bulk soil microbial communities from Mexico - Magueyal (Ma) metaGEnvironmentalOpen in IMG/M
3300014968Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaGHost-AssociatedOpen in IMG/M
3300018422Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 124 TEnvironmentalOpen in IMG/M
3300025900Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025904Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes)Host-AssociatedOpen in IMG/M
3300025908Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300025911Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025926Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025927Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025930Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)EnvironmentalOpen in IMG/M
3300025936Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025938Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300025940Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025941Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025942Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300025945Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025960Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025981Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026035Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026041Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026067Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300026095Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026116Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026142Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300027880Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3 (SPAdes)Host-AssociatedOpen in IMG/M
3300027886Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost (SPAdes)EnvironmentalOpen in IMG/M
3300027909Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)Host-AssociatedOpen in IMG/M
3300028380Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300030511Bulk soil microbial communities from Mexico - Amatitan (Am) metaG (v2)EnvironmentalOpen in IMG/M
3300031548Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3Host-AssociatedOpen in IMG/M
3300031716Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3EnvironmentalOpen in IMG/M
3300032002Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3Host-AssociatedOpen in IMG/M
3300032005Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1Host-AssociatedOpen in IMG/M
3300032157Garden soil microbial communities collected in Santa Monica, California, United States - V. faba soilEnvironmentalOpen in IMG/M
3300032421Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NN3EnvironmentalOpen in IMG/M
3300033475Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YCEnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap


 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
JGI1027J11758_1266000313300000789SoilVKEFSIFESALEFSAGEAENLGEVASIARRDFDERESFICHTTTASVEYACLMIENALVLRT
JGI10216J12902_11772197523300000956SoilMEAPAVKNFSIFEQALKHSGVENIENIGEIASLARRDFVEHETFVCHTTTASVEYGCLMI
JGI24737J22298_1007571323300001990Corn RhizosphereMEAPAVKNFSIFEQALKYPGVENIENIGEIASLTRRDFLDHESFVCHTTTASVEYGCLMI
Ga0062593_10118972213300004114SoilVKNFSIFEQALKYSGVEETENLGEIASLARRDFIERESFICHTTTASVEYACLMIE
Ga0062590_10153583713300004157SoilVKNFSIFEQALRFSGQQAVENIGEIASLSRRDFVERESFICHTTTASVEYASLMIENAIVLRTN
Ga0062595_10026238823300004479SoilVKNFSIFEQALTFPGVDRIENLGEIASLARRDFVERESFICHTTTASVEYGCLMIENAILLRT
Ga0062592_10207199613300004480SoilVRNFSIFERALKFSGAQDVENIGEIASLARRDFLERESFICHTTTASVEYGCLMIEN
Ga0062591_10072991023300004643SoilVKNFSIFEQALKYSGVDHIENLGEIASLARRDFVDRESFICHTTTASVEYGCLMIEN
Ga0062591_10207764623300004643SoilVRNFSIFEQALRFAGAQNVENIGEIASLARRDFVERESFVCHTTTASVEYGCLMIENAIL
Ga0062594_10149212013300005093SoilVKTFSIFEQALKFSGVDHIENIGEVASLARRDFVDRESFICHTTTASIEYGCLMIENAIL
Ga0070690_10043206713300005330Switchgrass RhizosphereVRNFSIFERALKFSTSQEVENIGEIASLARRDFQRESFICHTTTASVEYGCLMIEN
Ga0068869_10131217923300005334Miscanthus RhizosphereVRNFSIFEQALKFSGSQNVENVGEIASLARRDFQRESFICHTTTASVEYGCLMIENAILLRTNRSGRVYAG
Ga0068869_10210672913300005334Miscanthus RhizosphereVKNFSIFEQALRFSGAPGVENIGEIASLARRDFVEHESFVCHTTTASVEYGCLMIENAI
Ga0068869_10212927913300005334Miscanthus RhizosphereVKSFSIFEQALKSSRVENVENLGEIASLSRRDFLTRESFI*HTTTASVEYASLLIENAIL
Ga0070692_1014731113300005345Corn, Switchgrass And Miscanthus RhizosphereVKNFSIFEQALKFSDAENLGEIASLGRRDFVERESFICHTTTASVEYACLMIENAIL
Ga0070692_1078529613300005345Corn, Switchgrass And Miscanthus RhizosphereVKNFSIFEQALRFSGQQAVENIGEIASLSRRDFLERESFICHTTTASVEYASLMIENAIVLRTNR
Ga0070701_1107402923300005438Corn, Switchgrass And Miscanthus RhizosphereVKEFSIFESALEFSAGQAENLGEVASIARREFDERESFICHTTTASVEYAC
Ga0070705_10146102413300005440Corn, Switchgrass And Miscanthus RhizosphereVRNFSIFERALKFSTSQEVENVGEIASLARRDFQRESFICHTTTASVEYGCLMIENAILLRTNRS
Ga0070694_10091463713300005444Corn, Switchgrass And Miscanthus RhizosphereVKNFSIFEQALKFSGVDQTENLGEIASLARRDFAERESFICHTTTASVEYACLLIENAVLLRTN
Ga0070694_10150421213300005444Corn, Switchgrass And Miscanthus RhizosphereMEAPAVKNFSIFEQALKHSGVENIENIGEIASLTRRDFIDHESFVCHTTTTSVEYGCLMIENAILLR
Ga0068853_10127610323300005539Corn RhizosphereVRNFSIFEQALKFSGSQNVENVGEIASLARRDFQRESFICHTTTASVEYGCLMIENAI
Ga0070672_10195004413300005543Miscanthus RhizosphereVKNFSIFEQALRFSGAPGVENIGEIASLARRDFVEHESFVCHTTTASVEYGCLMIENAIL
Ga0070696_10189563923300005546Corn, Switchgrass And Miscanthus RhizosphereVKTFSIFEQALKFSGVDHIENIGEVASLARRDFVDRESFICHTTTASVEYGCLMI
Ga0070693_10045965923300005547Corn, Switchgrass And Miscanthus RhizosphereVKNFSIFEQALRFSGQQAVENIGEIASLSRRDFLERESFICHTTTASVEYASLMIENAIVLRTNRSGR
Ga0070693_10127193013300005547Corn, Switchgrass And Miscanthus RhizosphereVRNFSIFERALKFSTTQEVENVGEIASLARRDFQRESFICHTTTASVEYGCLMIENAILLRTNRSGRVYAGV
Ga0070704_10131352623300005549Corn, Switchgrass And Miscanthus RhizosphereVRNFSIFERALKFSGAQGVENIGEIASLARRDFLERESFICHTTTASVEYGCLMIENAI
Ga0068856_10106554313300005614Corn RhizosphereVKNFSIFEQALKFSDVDHIENLGEIASLSRRDFIERDSFICHTTTASVEYGCLMIEN
Ga0068856_10236309513300005614Corn RhizosphereVKNFSIFEQALKFSGVDKTENLGEIASVARRDFADRESFICHTTTASVEYGCLMIEN
Ga0068852_10211422823300005616Corn RhizosphereVKNYSIFEQALKFSGVEETENLGEIASLARRDFIERESFICHTTTASVEYGCLMIENALL
Ga0068859_10116346613300005617Switchgrass RhizosphereVKEFSIFDYALEFSAGQTDNLGEVASIARKEFIERESFLCHTTTAAVEYACLMIENALLLRTN
Ga0068864_10033915523300005618Switchgrass RhizosphereVKEFSIFESALEFSAGQAENLGEVASIARREFEERESFICHTTTASVEYACLMIENALLLRTNRGGRVYAGFE
Ga0068864_10041088213300005618Switchgrass RhizosphereVKNFSIFEQALTHSGVENIENIGEIASLTRRDFIDHESFVCHTTTASVEYGCLMIENSILLRTNRS
Ga0068864_10205478423300005618Switchgrass RhizosphereVRNFSIFEQALKFSGSQNVENVGEIASLARRDFQRESFICHTTTASVEYGCLMIENAILLRTN
Ga0068866_1127971713300005718Miscanthus RhizosphereVKTFSIFEQALKFSGVDHIENIGEVASLARRDFVDRESFICYTTTASIEYGCLMIENAILLRTN
Ga0068861_10089038123300005719Switchgrass RhizosphereVRNFSIFERALKYSGAHSVENIGEIASLARRDFQRESFICHTTTASVEYGCLMIENA
Ga0068870_1071688123300005840Miscanthus RhizosphereVKNFSIFEQALKHSGVENIENIGEIASLTRRDFVDHESFVCHTTTTSVEYGCL
Ga0068863_10104867123300005841Switchgrass RhizosphereVKEFSIFESALEFSAGQAENLGEVASIARREFDERESFICHTTTASVEYACLMIENALVLRTN
Ga0068863_10217497313300005841Switchgrass RhizosphereVRNFSIFERALKFSGANDVENIGEIASLARRDFQRESFVCHTTTASVEYGCLMIENAILL
Ga0068858_10114924523300005842Switchgrass RhizosphereVRNFSIFERALKYSGAHSVENIGEIASLARRDFQRESFICHTTTASVEYGCLMIENAIL
Ga0068862_10238648513300005844Switchgrass RhizosphereVKTFSIFEQALKFSGVDHIENLGEVASLARRDFVGRESFLCHTTTASVEYGCLMIENAILLRTNRSG
Ga0081539_1019086023300005985Tabebuia Heterophylla RhizosphereVKNFSIFEHALKFSEANKVENLGEIASLARRDFVERESFICHTTTASVEYGCLMIENAIL
Ga0075417_1034888013300006049Populus RhizosphereVKNFSIFDQALKFSDAAQTENLGEIASLGRRDFVERESFICHTTTASVEYACLMIENAI
Ga0075432_1006730423300006058Populus RhizosphereVKNFSIFEQALKYPGIENLENIGEIASLTRRDFLDHESFVCHTTTASVEYGCLMIENAIL
Ga0079220_1015662623300006806Agricultural SoilVKNFSIFEQALKSSGLDQTENLGELTSLSRPDFAERETFICHTTTASVEYACLLIENAVL
Ga0075421_10183472923300006845Populus RhizosphereVKNFSIFEQALKFSDVNRLENLGEIASLARRDFVGRESFLCHTTTASVEYGCLMIE
Ga0075433_1176720913300006852Populus RhizosphereVKNFSIFEQALKHSGVENMENIGEIASLTRRDFLEHESFVCHTTTASVEYGCLMIENSIL
Ga0075420_10151520013300006853Populus RhizosphereVKHFSIFEQALKFSDAENLGEIASLGRRDFVERESFICHTTTASVEYACLMIENAILLRTNRAGR
Ga0075434_10179055223300006871Populus RhizosphereVNNFSIFEQALKFSGIDEIENLGEIASLSRRDFVARESFLCHTTTASVEYGCLMIENAILLRTN
Ga0075434_10230585913300006871Populus RhizosphereVKNFSIFEQALKYPGIENLENIGEIASLTRRDFLDHESFVCHTTTASVEYGCLMI
Ga0079217_1091700513300006876Agricultural SoilVKNYSIFEQALKFSGVEETENLGEIASLTRRDFIERESFICHTTTASVEYSCLMIENALLLRTNRTARV
Ga0079215_1089967123300006894Agricultural SoilVKTFSIFEQALNFSGVDHIENLGEIASLARRDFAERESFICHTTTASVEYGCLMIENAILLRTNRSGRVYAGV
Ga0079215_1154712723300006894Agricultural SoilVKNFSIFEQALKLSGVEETENLGEIASLARRDFIERESFICHTTTASVEYACLLIENALLLRTNRAARVYA
Ga0075426_1122856113300006903Populus RhizosphereVKEFSIFESALQLSAGHVENLGEVASIARKEFDERESFICHTTMASIEYACLMIENALLL
Ga0079216_1012830713300006918Agricultural SoilLKNFSIFEQGLKFSGVHDIENLGEIASLARRDFVERESFMCHTTTASVEYACLMIENAILLRTNRAGRVYAG
Ga0075419_1135739123300006969Populus RhizosphereVHNFSIFEQALKFSGVEETENLGEIASLSRRDFIERESFICHTTTASVEYSC
Ga0105251_1058704913300009011Switchgrass RhizosphereVRNFSIFERALKFSASQGVENIGEIASLARRDFLERESFVCHTTTASVEYGCLMIENAIL
Ga0105240_1053168613300009093Corn RhizosphereVRNFSIFERALKFSTSQEVENVGEIASLARRDFQRESFICHTTTASVEYGCLMIENAILLRTNRSGRVYAG
Ga0105247_1105662123300009101Switchgrass RhizosphereVRNFSIFERALKFSISQEVENIGEIASLARRDFQRESFICHTTTASVEYGCLMIEN
Ga0105247_1114433713300009101Switchgrass RhizosphereVKNFSIFEQALKFSGVAEAENLGEIASLGRRDFVERESFICHTTTASVEYAC
Ga0105243_1039463313300009148Miscanthus RhizosphereMEAPAVKNFSIFEQALKHSGVENIENIGEIASLTRRDFLDHESFVCHTTTASVEYGCLMIENSILLRTNRSGRVY
Ga0111538_1344142213300009156Populus RhizosphereVRNFSIFEQALRLAGAKDIENIGEIASLARRDFVERESFICHTTTASVEYGCLMIENAILLRTNR
Ga0075423_1224043623300009162Populus RhizosphereVKNFSIFEQALRFSRAQDVENIGEIPSLSRRDFLERESFICHTTTASVEYTSLMIENAILLRTNRSGR
Ga0105241_1223215913300009174Corn RhizosphereVKHFSIFEQALQFSGVDHIENIGEVASLARRDFVDRESFICHTTTASVEYGCLM
Ga0105248_1194563513300009177Switchgrass RhizosphereVRNFSIFEQALKFSEVDRIENLGEIASLARRDFGGRESFICHTTTASVEYGCLMIENA
Ga0105237_1166529923300009545Corn RhizosphereVRNFSIFERALRFSGGQDVENIGEIASLSRRDFLERESFVCHTTTASVEYGCLMIENAILLLTNRSGRVYAGV
Ga0105238_1246239423300009551Corn RhizosphereVRNFSIFEQALKFNGVDRIENLGEIASLARRDFVERESFICHTTTASVEYGCLMIENAILLRTNRSGRVYAGVEK
Ga0105249_1151422413300009553Switchgrass RhizosphereVHNFSIFEQALKFSGVEETENLGEIASLARRDFTERESFICHTTTASVEYACLMIENAVLLRTNRA
Ga0105249_1250545523300009553Switchgrass RhizosphereVKNFSIFEQALRFSGQQAVENIGEIASLSRRDFLERESFICHTTTASVEYASLMIENAIVLRTNRSG
Ga0105249_1350434913300009553Switchgrass RhizosphereMEAPAVKNFSIFEQALKHSGVENIENIGEIASLTRRDFLDHESFVCHTTTASVEYGCLMIENSILLRTN
Ga0126313_1179591823300009840Serpentine SoilVKNFSIFEQALKFSGVEETENLGEIASLARRDFIERESFICHTTTASIEYACLMIENAVLLRTNRAGRVYAGV
Ga0126312_1115446813300010041Serpentine SoilVKTFSIFEQALNFSGVDCIENLGEVASLARRDFVERESFICHTTTASVEYG
Ga0134124_1088948113300010397Terrestrial SoilVKNFSIFEQALKYSGVEETENLGEIASLARRDFIERESFICHTTTASVEYACLMIENAVLLRTNRAG
Ga0134124_1296523113300010397Terrestrial SoilVRNFSIFEQALKFSGVDHIENLGEIASLARRDFVERESFICHTTTASVEYGCLMIENAI
Ga0134127_10006814103300010399Terrestrial SoilMEAPAVKNFSIFEQALKHSGVENIENIGEIASLTRRDFIDHESFVCHTTTASVEYGC
Ga0134122_1172282023300010400Terrestrial SoilVKNFSIFEQALKHSGVENIENIGEIASLTRRDFFEHESFVCHTTTASVEYGCLMIENAILLRTNR*
Ga0134121_1120841513300010401Terrestrial SoilVRNFSIFERALKFSISQEVENVGEIASLARRDFQRESFICHTTTASVEYGCLMIENAILLRTNRSGRVYAGV
Ga0134121_1305945223300010401Terrestrial SoilVKNFSIFEQAIKFSGLEQTENLGEIASLARRDFAERESFICHTTTASVEYACLLIENAVLLRTNRAGR
Ga0134123_1140847813300010403Terrestrial SoilVKNFSIFEQALNFSDAASIENLGEIASLARRDFFGRESFMCHTTTASVEYGCLII
Ga0134123_1226861823300010403Terrestrial SoilVKNFSIFEQALRLSGVDHIENLGEIASLARRDFLERESFVCHTTTASVEYGCLMIENAILLRTN
Ga0105246_1245528423300011119Miscanthus RhizosphereMEAPAVKNFSIFEQALKHSGVENIENIGEVASLARRDFIEHETFVCHTTTASVEYGCLMIENAIVLRT
Ga0120191_1012191323300012022TerrestrialVKTFSIFEQALKFSDAAAIENLGEIASVARRDFFGRETFICHTTTASVEYGCLIIENAILLRTNRS
Ga0164300_1036872913300012951SoilVKNFSIFEQALQFSGVDHIENLGEIASLARRDFVERESFICHTTTASVEYGCLMIENAI
Ga0157373_1067076913300013100Corn RhizosphereVRNFSIFERALKFSISQEVENIGEIASLARRDFQRESFICHTTTASVEYGCLMIENAILLRTNRS
Ga0157372_1167301413300013307Corn RhizosphereVKNFSIFEQALKFSGNGQIENLGETASLARCDFLGRESFMCHTTTASVEYACLMIENQILLRTNRAGRVYAGVEK
Ga0163163_1218235823300014325Switchgrass RhizosphereVRNFSIFERALKFSSSQSVENIGEIASLARRGFQRESFICHTTTASVEYGCLMIENAILLRTNRSGRVYAG
Ga0157380_1179374423300014326Switchgrass RhizosphereVKEFSIFEYGLQFVDGTAEDLGEIASIARREFEKRESFLCHTTTASVEYACLMIENA
Ga0182000_1034154823300014487SoilMEAPAVKNFSIFEQALKFSGVENIENIGEIASLTRRDFLDHESFVCHTTTASV
Ga0157379_1030481613300014968Switchgrass RhizosphereVRNFSIFERALKFSISQEVENIGEIASLARRDFQRESFICHTTTASVEYGC
Ga0190265_1227508113300018422SoilVKNFSIFEQALNSSGVENIENLGEVASLARRDFVERESFICHTTTASVEYGCLMI
Ga0207710_1041710813300025900Switchgrass RhizosphereVRNFSIFERALKFSISQEVENIGEIASLARRDFQRESFICHTTTASVEYGCLMIE
Ga0207647_1071378113300025904Corn RhizosphereVKEFSIFDYALEFSAGQADNLGEVANVQRKEFAERESFLCHTTTAAVEYACLMIENALLLRTNRAGRVY
Ga0207643_1060765713300025908Miscanthus RhizosphereVKNFSIFEQALKHSGVENIENIGEIASLTRRDFVDHESFVCHTTTTSVEYGCLMIE
Ga0207654_1104745413300025911Corn RhizosphereVKNFSIFEQALKFSDVDHIENLGEIASLSRRDFIERESFICHTTTASVEYGCLMIEN
Ga0207654_1136108223300025911Corn RhizosphereVRNFSIFERALRYSGANDVENIGEIASLARRDFQRESFVCHTTTASVEYGCLMIENAILLRTNRSGR
Ga0207654_1141814513300025911Corn RhizosphereVRNFSIFEQALKFSGSQNVENVGEIASLARRDFQRESFICHTTTASVEYGCLMIENAILL
Ga0207659_1120319813300025926Miscanthus RhizosphereVKHFSIFEQALQFSGVDHVENIGEVASLARRDFVDRESFICHTTTASVEYGCLMIENAILLRTNRSGR
Ga0207687_1130406513300025927Miscanthus RhizosphereVRDFSIFERAIKYSGAQSVENIGEIASLARRDFQRESFICHTTTASVEYGCLMIE
Ga0207687_1186671913300025927Miscanthus RhizosphereVRNFSIFERALRFSGGQDVENIGEIASLSRRDFLERESFVCHTTTASVEYGCLMIENAIL
Ga0207701_1093255713300025930Corn, Switchgrass And Miscanthus RhizosphereVRNFSIFERALKFSGAQGVENIGEIASLARRDFLERESFICHTTTASVEY
Ga0207670_1046072913300025936Switchgrass RhizosphereVRNFSIFERALKFSTSQEVENVGEIASLARRDFQRESFICHTTTASVEYGCLMIENAILLRTNRSGR
Ga0207704_1050666123300025938Miscanthus RhizosphereVKEFSIFESALEFSAGQAENLGEVASIARREFDERESFICHTTTASVEYACLMIENA
Ga0207691_1175583613300025940Miscanthus RhizosphereVKNFSIFEQALRFSGQQAVENIGEIASLSRRDFLERESFICHTTTASVEYASLMIENAIVLR
Ga0207711_1204403323300025941Switchgrass RhizosphereVKNFSIFEQALKYSGVDHIENLGEIASLARRDFVDRESFICHTTTASVEYGCLMIENAILLRTNR
Ga0207689_1047228213300025942Miscanthus RhizosphereVRNFSIFEQALKFSGSQNVENVGEIASLARRDFQRESFICHTTTASVEYGCLMIENAILLRTNRSGRVYA
Ga0207679_1123421023300025945Corn RhizosphereVRNFSIFEQALMFSGSQNVENIGEIASLARRDFQRESFICHTTTASVEYGCL
Ga0207651_1091665523300025960Switchgrass RhizosphereVKNFSIFEQALKFSGVAEAENLGEIASLGRRDFVERESFICHTTTASVEYACLMIENAILLRTNRAGR
Ga0207640_1116338323300025981Corn RhizosphereVRNFSIFERALRFAGAQDVENIGEIASLARRDFIERESFICHTTTASVEYGCLMIENAILLRTNRSGR
Ga0207703_1113198123300026035Switchgrass RhizosphereVKEFSIFDYALEFSAGQADNLGEVANVQRKEFAERESFLCHTTTAAVEYACLMIENALLLRTNRAGRFMQASKSFRSCSQ
Ga0207639_1176855213300026041Corn RhizosphereVKNFSIFEQALKFSGNGQIENLGETASLARCEFFGRESFMCHTTTASVEYACLMIENQIL
Ga0207678_1153533113300026067Corn RhizosphereVKEFSIFDYALEFSAGQADNLGEVANVQRKEFAERESFLCHTTTAAVEYACLMIENALLLRTNRAG
Ga0207676_1113228313300026095Switchgrass RhizosphereVKTFSIFEQALKFSGVDHIENIGEVASLARRDFVDRESFICHTTTASVEYGCLMIENAILLRTN
Ga0207676_1140455623300026095Switchgrass RhizosphereVRNFSIFERALKFSGANDVENIGEIASLARRDFQRESFICHTTTASVEYGCLMIENAILLRT
Ga0207676_1146627123300026095Switchgrass RhizosphereVRNFSIFERALKFSASQGVENIGEIASLSRRNFLERESFICHTTAASVEYGCLMI
Ga0207674_1101903323300026116Corn RhizosphereVRNFSIFERALKFSGAQGVENIGEIASLARRDFLERESFICHTTTASVEYGCLMIENAILLRTNR
Ga0207698_1156519213300026142Corn RhizosphereVKHFSIFEQALQFSGVDHIENIGEVASLARRDFVERESFICHTTTASVEYGCLMIENAILLR
Ga0209481_1044273323300027880Populus RhizosphereVKNFSIFEQALQFSGVDHIENLGEIASLARRDFVERESFICHTTTASVEYGCLMIENAILLRTNRSGR
Ga0209486_1023810823300027886Agricultural SoilVKNFSIFEQALKFSGLEQTENLGEIASLARKDFADRESFICHTTTASVEYACLLIENAILLRTNRSGRVYAG
Ga0209382_1172600823300027909Populus RhizosphereVNNFSIFEQALKLSGVEETENLGEIASLARRDFIERESFICHTTTASVEYAC
Ga0268265_1153522023300028380Switchgrass RhizosphereVKNFSIFEQALKFSGNGQIENLGETASLARCEFFGRESFMCHTTTASVEYACLMIE
Ga0268265_1188048413300028380Switchgrass RhizosphereVKNYSIFEQALKFSGVEETENLGEIASLARRDFIERESFICHTTTASVEYGCLMIENALLLRTNRAARV
Ga0268265_1241752423300028380Switchgrass RhizosphereVKNFSIFEQALNFSDAASIENLGEIASLARRDFFGRESFMCHTTTASVEYGCL
Ga0268241_1016117623300030511SoilVKNFSIFEQALKFSGLDQTENLGEIAGLARRDFAERESFICHTTTASVEYACLLIENAILLR
Ga0307408_10241074213300031548RhizosphereVKNFSIFEQALKHSGVENIDNIGEIASLTRRDFLDHESFVCHTTTASVEYGCLMIENAILLRT
Ga0310813_1029178723300031716SoilVKNFSIFEQALKYSGVDHIENLGEIASLARRDFVDRESFICHTTTASVEYGCLMIENAILLRTNRSG
Ga0307416_10164986723300032002RhizosphereVKNFSIFEQALKFSGSPGVENIGEIASLARRDFVERESFICHTTTASVEYGCLM
Ga0307416_10302755223300032002RhizosphereVKNFSIFEQALKLSGVEETENLGEIASLARRDFIERESFICHTTTASVEYACLLIENA
Ga0307411_1188495323300032005RhizosphereVKDFSIFEQALKFSGNGQIENLGETASLARCEFFGRESFMCHTTTASVEY
Ga0315912_1019169713300032157SoilVKSFSIFEQALKYSGVEDTQNLGEIASLSRRDFLERESFICHTTTASVEYACLLIENAVL
Ga0310812_1031131913300032421SoilVKEFSIFESALEFSAGQAENLGEVASIARREFEERESFICHTTTASVEYACLMIENALLLRTNRGGRVY
Ga0310811_1067878523300033475SoilVKNFSIFEQALQFTDVDHIENLGEIASLSRRDFIERESFICHTTTASVEYG

 ⦗Top⦘


Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.