Metagenome / Metatranscriptome Family F062507

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F062507
Family Type	Metagenome / Metatranscriptome
Number of Sequences	130
Average Sequence Length	63 residues
Representative Sequence	VSESSFYKTEQGTIFRLKEDDEGRLSVELLQTSLWVQGPIGMAGLRVAPTTTKLTERQIQSLPQ
Number of Associated Samples	119
Number of Associated Scaffolds	130

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	62.31 %
% of genes near scaffold ends (potentially truncated)	43.08 %
% of genes from short scaffolds (< 2000 bps)	86.15 %
Associated GOLD sequencing projects	112
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (70.769 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand (11.539 % of family members)
Environment Ontology (ENVO)	Unclassified (24.615 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (36.154 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 7.81% β-sheet: 37.50% Coil/Unstructured: 54.69%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 130 Family Scaffolds
PF00027	cNMP_binding	23.08
PF00196	GerE	1.54
PF00355	Rieske	1.54
PF00313	CSD	1.54
PF00574	CLP_protease	1.54
PF03006	HlyIII	1.54
PF13408	Zn_ribbon_recom	0.77
PF00294	PfkB	0.77
PF03816	LytR_cpsA_psr	0.77
PF03795	YCII	0.77
PF00583	Acetyltransf_1	0.77
PF05222	AlaDh_PNT_N	0.77
PF01402	RHH_1	0.77
PF02588	YitT_membrane	0.77
PF04226	Transgly_assoc	0.77
PF00211	Guanylate_cyc	0.77
PF05726	Pirin_C	0.77
PF13686	DrsE_2	0.77
PF01726	LexA_DNA_bind	0.77
PF00246	Peptidase_M14	0.77
PF02518	HATPase_c	0.77
PF07730	HisKA_3	0.77
PF13806	Rieske_2	0.77

COG ID	Name	Functional Category	% Frequency in 130 Family Scaffolds
COG0616	Periplasmic serine protease, ClpP class	Posttranslational modification, protein turnover, chaperones [O]	3.08
COG0740	ATP-dependent protease ClpP, protease subunit	Posttranslational modification, protein turnover, chaperones [O]	3.08
COG1030	Membrane-bound serine protease NfeD, ClpP class	Posttranslational modification, protein turnover, chaperones [O]	1.54
COG1272	Predicted membrane channel-forming protein YqfA, hemolysin III family	Intracellular trafficking, secretion, and vesicular transport [U]	1.54
COG1284	Uncharacterized membrane-anchored protein YitT, contains DUF161 and DUF2179 domains	Function unknown [S]	0.77
COG1316	Anionic cell wall polymer biosynthesis enzyme TagV/TagU, LytR-Cps2A-Psr (LCP) family (peptidoglycan teichoic acid transferase)	Cell wall/membrane/envelope biogenesis [M]	0.77
COG1741	Redox-sensitive bicupin YhaK, pirin superfamily	General function prediction only [R]	0.77
COG2114	Adenylate cyclase, class 3	Signal transduction mechanisms [T]	0.77
COG2261	Uncharacterized membrane protein YeaQ/YmgE, transglycosylase-associated protein family	General function prediction only [R]	0.77
COG2350	YciI superfamily enzyme, includes 5-CHQ dehydrochlorinase, contains active-site pHis	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.77
COG2364	Uncharacterized membrane protein YczE	Function unknown [S]	0.77
COG3850	Signal transduction histidine kinase NarQ, nitrate/nitrite-specific	Signal transduction mechanisms [T]	0.77
COG3851	Signal transduction histidine kinase UhpB, glucose-6-phosphate specific	Signal transduction mechanisms [T]	0.77
COG4564	Signal transduction histidine kinase	Signal transduction mechanisms [T]	0.77
COG4585	Signal transduction histidine kinase ComP	Signal transduction mechanisms [T]	0.77

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	70.77 %
Unclassified	root	N/A	29.23 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	70.77 %
Unclassified	root	N/A	29.23 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	70.77 %
Unclassified	root	N/A	29.23 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	60.00 %
Unclassified	root	N/A	29.23 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	0.77 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	0.77 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	60.00 %
Unclassified	root	N/A	29.23 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	0.77 %
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	0.77 %

Name	Rank	Taxonomy	Distribution
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	56.92 %
Unclassified	root	N/A	29.23 %
unclassified Gemmatimonadetes	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes	0.77 %
Planctomycetia	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	0.77 %

Name	Rank	Taxonomy	Distribution
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	56.92 %
Unclassified	root	N/A	29.23 %
Pirellulales	order	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Pirellulales	0.77 %
Gemmatimonadetes bacterium 13_1_40CM_66_11	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium 13_1_40CM_66_11	0.77 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	56.92 %
Unclassified	root	N/A	29.23 %
Pirellulaceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Pirellulales → Pirellulaceae	0.77 %
Gemmatimonadetes bacterium 13_1_40CM_66_11	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium 13_1_40CM_66_11	0.77 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	56.92 %
Unclassified	root	N/A	29.23 %
Candidatus Anammoximicrobium	genus	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Pirellulales → Pirellulaceae → Candidatus Anammoximicrobium	0.77 %
Gemmatimonadetes bacterium 13_1_40CM_66_11	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium 13_1_40CM_66_11	0.77 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	56.92 %
Unclassified	root	N/A	29.23 %
unclassified Candidatus Anammoximicrobium	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Pirellulales → Pirellulaceae → Candidatus Anammoximicrobium → unclassified Candidatus Anammoximicrobium	0.77 %
Gemmatimonadetes bacterium 13_1_40CM_66_11	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium 13_1_40CM_66_11	0.77 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	56.92 %
Unclassified	root	N/A	29.23 %
Candidatus Anammoximicrobium sp.	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Pirellulales → Pirellulaceae → Candidatus Anammoximicrobium → unclassified Candidatus Anammoximicrobium → Candidatus Anammoximicrobium sp.	0.77 %
Gemmatimonadetes bacterium 13_1_40CM_66_11	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium 13_1_40CM_66_11	0.77 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2088090008\|P3_DRAFT_NODE_126353_len_833_cov_8_757503	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	883	Open in IMG/M
2124908041\|P3_CLC_ConsensusfromContig93413	All Organisms → cellular organisms → Bacteria	1045	Open in IMG/M
2124908043\|A2_c1_ConsensusfromContig38661	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	715	Open in IMG/M
2124908045\|KansclcFeb2_ConsensusfromContig102346	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1065	Open in IMG/M
2140918007\|ConsensusfromContig90877	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1584	Open in IMG/M
3300000550\|F24TB_10296767	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2538	Open in IMG/M
3300000787\|JGI11643J11755_11175757	Not Available	518	Open in IMG/M
3300000953\|JGI11615J12901_10094664	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1272	Open in IMG/M
3300003992\|Ga0055470_10107722	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	695	Open in IMG/M
3300003994\|Ga0055435_10149625	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	649	Open in IMG/M
3300003995\|Ga0055438_10019736	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Pirellulales → Pirellulaceae → Candidatus Anammoximicrobium → unclassified Candidatus Anammoximicrobium → Candidatus Anammoximicrobium sp.	1514	Open in IMG/M
3300003996\|Ga0055467_10004409	All Organisms → cellular organisms → Bacteria	2425	Open in IMG/M
3300003997\|Ga0055466_10002619	All Organisms → cellular organisms → Bacteria	2700	Open in IMG/M
3300004156\|Ga0062589_101407685	Not Available	680	Open in IMG/M
3300004479\|Ga0062595_100007421	All Organisms → cellular organisms → Bacteria	3343	Open in IMG/M
3300004643\|Ga0062591_101917510	Not Available	608	Open in IMG/M
3300005093\|Ga0062594_101741166	Not Available	653	Open in IMG/M
3300005165\|Ga0066869_10084851	Not Available	612	Open in IMG/M
3300005169\|Ga0066810_10196627	Not Available	505	Open in IMG/M
3300005181\|Ga0066678_10496672	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	811	Open in IMG/M
3300005330\|Ga0070690_101327105	Not Available	577	Open in IMG/M
3300005355\|Ga0070671_101389439	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	620	Open in IMG/M
3300005438\|Ga0070701_10573910	Not Available	743	Open in IMG/M
3300005441\|Ga0070700_100580451	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	875	Open in IMG/M
3300005455\|Ga0070663_101209906	Not Available	664	Open in IMG/M
3300005518\|Ga0070699_100040129	All Organisms → cellular organisms → Bacteria	4054	Open in IMG/M
3300005558\|Ga0066698_10560977	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	774	Open in IMG/M
3300005617\|Ga0068859_101964134	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	646	Open in IMG/M
3300005618\|Ga0068864_101243252	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	744	Open in IMG/M
3300005840\|Ga0068870_11123737	Not Available	566	Open in IMG/M
3300005874\|Ga0075288_1040279	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	707	Open in IMG/M
3300006034\|Ga0066656_10179881	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1337	Open in IMG/M
3300006881\|Ga0068865_101595401	Not Available	586	Open in IMG/M
3300009012\|Ga0066710_101591461	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1002	Open in IMG/M
3300009012\|Ga0066710_102067706	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	839	Open in IMG/M
3300009090\|Ga0099827_10280641	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1406	Open in IMG/M
3300009090\|Ga0099827_11395879	Not Available	610	Open in IMG/M
3300009090\|Ga0099827_11870750	Not Available	523	Open in IMG/M
3300009801\|Ga0105056_1007465	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1167	Open in IMG/M
3300009804\|Ga0105063_1037081	Not Available	652	Open in IMG/M
3300009806\|Ga0105081_1089590	Not Available	509	Open in IMG/M
3300009807\|Ga0105061_1043150	Not Available	671	Open in IMG/M
3300009809\|Ga0105089_1010674	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1134	Open in IMG/M
3300009810\|Ga0105088_1085400	Not Available	570	Open in IMG/M
3300009811\|Ga0105084_1042756	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	793	Open in IMG/M
3300009817\|Ga0105062_1006448	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1741	Open in IMG/M
3300009818\|Ga0105072_1020895	Not Available	1194	Open in IMG/M
3300009836\|Ga0105068_1023810	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1050	Open in IMG/M
3300010085\|Ga0127445_1065325	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	790	Open in IMG/M
3300010093\|Ga0127490_1052273	Not Available	530	Open in IMG/M
3300010103\|Ga0127500_1056837	Not Available	642	Open in IMG/M
3300010336\|Ga0134071_10035271	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2207	Open in IMG/M
3300010373\|Ga0134128_12653840	Not Available	552	Open in IMG/M
3300010391\|Ga0136847_11563011	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	642	Open in IMG/M
3300010399\|Ga0134127_10571804	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1154	Open in IMG/M
3300010857\|Ga0126354_1015130	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	503	Open in IMG/M
3300011003\|Ga0138514_100075461	Not Available	710	Open in IMG/M
3300012204\|Ga0137374_10007432	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	13046	Open in IMG/M
3300012204\|Ga0137374_10380435	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1129	Open in IMG/M
3300012358\|Ga0137368_10191038	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1467	Open in IMG/M
3300012390\|Ga0134054_1013211	Not Available	592	Open in IMG/M
3300012392\|Ga0134043_1099701	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium 13_1_40CM_66_11	526	Open in IMG/M
3300012398\|Ga0134051_1018012	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	979	Open in IMG/M
3300012400\|Ga0134048_1028158	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	855	Open in IMG/M
3300012402\|Ga0134059_1258190	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1030	Open in IMG/M
3300013772\|Ga0120158_10146466	All Organisms → cellular organisms → Bacteria	1315	Open in IMG/M
3300015245\|Ga0137409_10969887	Not Available	687	Open in IMG/M
3300015371\|Ga0132258_10127532	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	6061	Open in IMG/M
3300015372\|Ga0132256_101832088	Not Available	715	Open in IMG/M
3300017659\|Ga0134083_10326614	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	656	Open in IMG/M
3300017947\|Ga0187785_10121790	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1067	Open in IMG/M
3300017947\|Ga0187785_10564406	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	578	Open in IMG/M
3300017966\|Ga0187776_10384259	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	935	Open in IMG/M
3300017997\|Ga0184610_1103806	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	903	Open in IMG/M
3300018027\|Ga0184605_10030633	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2216	Open in IMG/M
3300018027\|Ga0184605_10306182	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	719	Open in IMG/M
3300018028\|Ga0184608_10002963	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	5214	Open in IMG/M
3300018029\|Ga0187787_10342673	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	573	Open in IMG/M
3300018031\|Ga0184634_10324228	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	706	Open in IMG/M
3300018032\|Ga0187788_10010736	All Organisms → cellular organisms → Bacteria	2830	Open in IMG/M
3300018032\|Ga0187788_10032656	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1710	Open in IMG/M
3300018053\|Ga0184626_10423004	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	528	Open in IMG/M
3300018056\|Ga0184623_10503251	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	517	Open in IMG/M
3300018061\|Ga0184619_10049633	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1822	Open in IMG/M
3300018071\|Ga0184618_10046834	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1557	Open in IMG/M
3300018071\|Ga0184618_10150533	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	951	Open in IMG/M
3300018077\|Ga0184633_10312530	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	799	Open in IMG/M
3300018078\|Ga0184612_10318073	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	795	Open in IMG/M
3300018079\|Ga0184627_10654132	Not Available	520	Open in IMG/M
3300018089\|Ga0187774_10932138	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	599	Open in IMG/M
3300018476\|Ga0190274_11338334	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	804	Open in IMG/M
3300019233\|Ga0184645_1173184	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	500	Open in IMG/M
3300019259\|Ga0184646_1062933	Not Available	671	Open in IMG/M
3300019265\|Ga0187792_1217723	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	518	Open in IMG/M
3300021080\|Ga0210382_10019732	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2421	Open in IMG/M
3300025325\|Ga0209341_10662742	Not Available	809	Open in IMG/M
3300025908\|Ga0207643_10232115	Not Available	1132	Open in IMG/M
3300025908\|Ga0207643_10543933	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	745	Open in IMG/M
3300025972\|Ga0207668_12105347	Not Available	508	Open in IMG/M
3300025981\|Ga0207640_11575756	Not Available	591	Open in IMG/M
3300026067\|Ga0207678_10647275	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	928	Open in IMG/M
3300026121\|Ga0207683_11231586	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	693	Open in IMG/M
3300027056\|Ga0209879_1000630	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	4340	Open in IMG/M
3300027277\|Ga0209846_1048414	Not Available	655	Open in IMG/M
3300027332\|Ga0209861_1017208	Not Available	1080	Open in IMG/M
3300027490\|Ga0209899_1010795	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2088	Open in IMG/M
3300027870\|Ga0209023_10027024	All Organisms → cellular organisms → Bacteria	4741	Open in IMG/M
3300027882\|Ga0209590_10253824	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1122	Open in IMG/M
3300027882\|Ga0209590_10692563	Not Available	652	Open in IMG/M
3300027949\|Ga0209860_1005413	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1788	Open in IMG/M
3300028784\|Ga0307282_10429250	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	641	Open in IMG/M
3300028803\|Ga0307281_10070478	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1134	Open in IMG/M
3300028824\|Ga0307310_10631272	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	547	Open in IMG/M
3300028828\|Ga0307312_10373235	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	935	Open in IMG/M
3300028878\|Ga0307278_10009451	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4588	Open in IMG/M
3300028884\|Ga0307308_10640576	Not Available	510	Open in IMG/M
3300030989\|Ga0308196_1060185	Not Available	544	Open in IMG/M
3300030993\|Ga0308190_1100833	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	633	Open in IMG/M
3300031226\|Ga0307497_10177189	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	906	Open in IMG/M
3300031576\|Ga0247727_11186617	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	512	Open in IMG/M
3300031949\|Ga0214473_10200014	All Organisms → cellular organisms → Bacteria	2313	Open in IMG/M
3300031965\|Ga0326597_10388044	All Organisms → cellular organisms → Bacteria	1557	Open in IMG/M
3300031997\|Ga0315278_10533706	All Organisms → cellular organisms → Bacteria	1206	Open in IMG/M
3300032397\|Ga0315287_12115385	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	617	Open in IMG/M
3300032892\|Ga0335081_10792942	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1133	Open in IMG/M
3300033407\|Ga0214472_10041558	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	4685	Open in IMG/M
3300034155\|Ga0370498_010040	All Organisms → cellular organisms → Bacteria	1965	Open in IMG/M
3300034164\|Ga0364940_0019899	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1693	Open in IMG/M
3300034643\|Ga0370545_117003	Not Available	594	Open in IMG/M
3300034643\|Ga0370545_130405	Not Available	569	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	89.23%
Host-Associated	Host-Associated	10.77%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	70.00%
Aquatic	Environmental → Aquatic	19.23%
Plants	Host-Associated → Plants	10.77%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	67.69%
Sediment	Environmental → Aquatic → Sediment	10.00%
Rhizoplane	Host-Associated → Plants → Rhizoplane	6.92%
Freshwater	Environmental → Aquatic → Freshwater	5.38%
Marine	Environmental → Aquatic → Marine	3.85%
Rhizosphere	Host-Associated → Plants → Rhizosphere	3.85%
Cave	Environmental → Terrestrial → Cave	0.77%
Floodplain	Environmental → Terrestrial → Floodplain	0.77%
Agricultural Field	Environmental → Terrestrial → Agricultural Field	0.77%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	43.08%
Sand	Environmental → Terrestrial → Soil → Sand	11.54%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	10.00%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	8.46%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	5.38%
Loam	Environmental → Terrestrial → Soil → Loam	4.62%
Wetlands	Environmental → Aquatic → Marine → Wetlands	3.85%
Soil	Host-Associated → Plants → Rhizosphere → Soil	3.85%
Sediment	Environmental → Aquatic → Freshwater → Sediment	2.31%
Lake	Environmental → Aquatic → Freshwater → Lake	2.31%
Lentic	Environmental → Aquatic → Freshwater → Lentic	0.77%
Unclassified	Environmental → Terrestrial → Cave → Unclassified	0.77%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	0.77%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified	0.77%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.77%
Soil	Host-Associated → Plants → Rhizoplane → Soil	0.77%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	28.46%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	11.54%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	10.00%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	8.46%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	6.15%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	5.38%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	3.85%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	3.85%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	3.85%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	3.08%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	3.08%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	2.31%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	2.31%
Uranium Contaminated	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated	1.54%
Unclassified	Environmental → Aquatic → Freshwater → Lentic → Unclassified	0.77%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.77%
Unclassified	Environmental → Terrestrial → Soil → Loam → Unclassified	0.77%
Unclassified	Environmental → Terrestrial → Cave → Unclassified → Unclassified	0.77%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	0.77%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified	0.77%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.77%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	0.77%

Habitat	Taxonomy	Distribution
Groundwater Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand	11.54%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	10.00%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	10.00%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	7.69%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	6.92%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	5.38%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	4.62%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	3.85%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	3.08%
Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Soil	3.08%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	3.08%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	2.31%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.31%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	1.54%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.54%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.54%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.54%
Soil	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil	1.54%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.54%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	1.54%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	1.54%
Freshwater And Sediment	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater And Sediment	0.77%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Freshwater Sediment	0.77%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost	0.77%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.77%
Untreated Peat Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil	0.77%
Rice Paddy Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Rice Paddy Soil	0.77%
Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Peatland	0.77%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.77%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.77%
Soil	Environmental → Terrestrial → Soil → Loam → Unclassified → Soil	0.77%
Biofilm	Environmental → Terrestrial → Cave → Unclassified → Unclassified → Biofilm	0.77%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	0.77%
Soil	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified → Soil	0.77%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.77%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.77%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	0.77%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.77%
Boreal Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil	0.77%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2088090008	Permafrost microbial communities from permafrost in Bonanza Creek, Alaska - Permafrost Layer P3	Environmental	Open in IMG/M
2124908041	Permafrost microbial communities from permafrost in Bonanza Creek, Alaska - Permafrost Layer P3	Environmental	Open in IMG/M
2124908043	Permafrost microbial communities from permafrost in Bonanza Creek, Alaska - Active Layer A2	Environmental	Open in IMG/M
2124908045	Soil microbial communities from Great Prairies - Kansas assembly 1 01_01_2011	Environmental	Open in IMG/M
2140918007	Permafrost microbial communities from permafrost in Bonanza Creek, Alaska - Active_all	Environmental	Open in IMG/M
3300000550	Amended soil microbial communities from Kansas Great Prairies, USA - BrdU amended with acetate total DNA F2.4 TB clc assemly	Environmental	Open in IMG/M
3300000787	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000953	Soil microbial communities from Great Prairies - Kansas Corn soil	Environmental	Open in IMG/M
3300003992	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_TuleB_D1	Environmental	Open in IMG/M
3300003994	Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_ThreeSqA_D2	Environmental	Open in IMG/M
3300003995	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_TuleA_D2	Environmental	Open in IMG/M
3300003996	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_CattailB_D2	Environmental	Open in IMG/M
3300003997	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_CattailC_D1	Environmental	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300004643	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005165	Soil and rhizosphere microbial communities from Laval, Canada - mgHMC	Environmental	Open in IMG/M
3300005169	Soil and rhizosphere microbial communities from Laval, Canada - mgHPA	Environmental	Open in IMG/M
3300005181	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127	Environmental	Open in IMG/M
3300005330	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG	Environmental	Open in IMG/M
3300005355	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG	Host-Associated	Open in IMG/M
3300005438	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG	Environmental	Open in IMG/M
3300005441	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG	Environmental	Open in IMG/M
3300005455	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG	Host-Associated	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005558	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147	Environmental	Open in IMG/M
3300005617	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2	Host-Associated	Open in IMG/M
3300005618	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2	Host-Associated	Open in IMG/M
3300005840	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2	Host-Associated	Open in IMG/M
3300005874	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_20C_0N_404	Environmental	Open in IMG/M
3300006034	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_105	Environmental	Open in IMG/M
3300006881	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2	Host-Associated	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009801	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S2_20_30	Environmental	Open in IMG/M
3300009804	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N3_30_40	Environmental	Open in IMG/M
3300009806	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S1_50_60	Environmental	Open in IMG/M
3300009807	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S3_0_10	Environmental	Open in IMG/M
3300009809	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S2_30_40	Environmental	Open in IMG/M
3300009810	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S3_20_30	Environmental	Open in IMG/M
3300009811	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N3_20_30	Environmental	Open in IMG/M
3300009817	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S3_10_20	Environmental	Open in IMG/M
3300009818	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_30_40	Environmental	Open in IMG/M
3300009836	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_10_20	Environmental	Open in IMG/M
3300010085	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Wat_40_2_0_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010093	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_40_2_16_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010103	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_40_5_16_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010336	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09082015	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010391	Freshwater sediment microbial communities from Lake Superior, USA - Station SU-17. Combined Assembly of Gp0155404, Gp0155335, Gp0155336, Gp0155336, Gp0155403, Gp0155406	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300010857	Boreal forest soil eukaryotic communities from Alaska, USA - W1-3 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300011003	Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t9i015	Environmental	Open in IMG/M
3300012204	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaG	Environmental	Open in IMG/M
3300012358	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_100_16 metaG	Environmental	Open in IMG/M
3300012390	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_5_8_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012392	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_2_4_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012398	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_2_24_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012400	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_2_4_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012402	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_5_8_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300013772	Permafrost microbial communities from Nunavut, Canada - A10_80_0.25M	Environmental	Open in IMG/M
3300015245	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300017659	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300017947	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0815_BV2_4_20_MG	Environmental	Open in IMG/M
3300017966	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP12_20_MG	Environmental	Open in IMG/M
3300017997	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100_coex	Environmental	Open in IMG/M
3300018027	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_coex	Environmental	Open in IMG/M
3300018028	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_coex	Environmental	Open in IMG/M
3300018029	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_BV01_MP06_20_MG	Environmental	Open in IMG/M
3300018031	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_200_b1	Environmental	Open in IMG/M
3300018032	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_BV01_MP10_20_MG	Environmental	Open in IMG/M
3300018053	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_60_b1	Environmental	Open in IMG/M
3300018056	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100_b1	Environmental	Open in IMG/M
3300018061	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_b1	Environmental	Open in IMG/M
3300018071	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_b1	Environmental	Open in IMG/M
3300018077	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_170_b1	Environmental	Open in IMG/M
3300018078	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_60_coex	Environmental	Open in IMG/M
3300018079	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_127_b1	Environmental	Open in IMG/M
3300018089	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP05_20_MG	Environmental	Open in IMG/M
3300018476	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 T	Environmental	Open in IMG/M
3300019233	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019259	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019265	Metatranscriptome of tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP10_20_MT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300021080	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_coex redo	Environmental	Open in IMG/M
3300025325	Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 13_2 (SPAdes)	Environmental	Open in IMG/M
3300025908	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025972	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025981	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026067	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026121	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300027056	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N3_20_30 (SPAdes)	Environmental	Open in IMG/M
3300027277	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S3_20_30 (SPAdes)	Environmental	Open in IMG/M
3300027332	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S2_30_40 (SPAdes)	Environmental	Open in IMG/M
3300027490	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S1_0_10 (SPAdes)	Environmental	Open in IMG/M
3300027870	Freshwater and sediment microbial communities from Lake Erie, Canada (SPAdes)	Environmental	Open in IMG/M
3300027882	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027949	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S2_40_50 (SPAdes)	Environmental	Open in IMG/M
3300028784	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_121	Environmental	Open in IMG/M
3300028803	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_120	Environmental	Open in IMG/M
3300028824	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_197	Environmental	Open in IMG/M
3300028828	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_202	Environmental	Open in IMG/M
3300028878	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_117	Environmental	Open in IMG/M
3300028884	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_195	Environmental	Open in IMG/M
3300030989	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_197 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030993	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_185 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031226	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 10_S	Environmental	Open in IMG/M
3300031576	Biofilm microbial communities from Wishing Well Cave, Virginia, United States - WW16-25	Environmental	Open in IMG/M
3300031949	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT98D197	Environmental	Open in IMG/M
3300031965	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT100D185	Environmental	Open in IMG/M
3300031997	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G06_0	Environmental	Open in IMG/M
3300032397	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G11_0	Environmental	Open in IMG/M
3300032892	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5	Environmental	Open in IMG/M
3300033407	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT140D175	Environmental	Open in IMG/M
3300034155	Peat soil microbial communities from wetlands in Alaska, United States - Frozen_pond_05D_17	Environmental	Open in IMG/M
3300034164	Sediment microbial communities from East River floodplain, Colorado, United States - 14_s17	Environmental	Open in IMG/M
3300034643	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_120 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
P3_DRAFT_01215570	2088090008	Soil	VSESSFYKTERGTIFRLKEDDEGRLSVELLQTSLWVQGPIGMAGLRVAPTTTKLTERQIQSLPQ
P3_CLC_01002500	2124908041	Soil	VSESSFYKTERGTIFRLKEDDEGRLSVELLQTSLWVQGPIGMAGLRVAPTTTKLTE
A2_c1_00831130	2124908043	Soil	MNVYRTGEGTIFRIREDEEGRLSVELLKRPLWVAGPIGMAGLRIAPTTKRLTPRQIERLP
KansclcFeb2_04661990	2124908045	Soil	MAETSVYRTEHGKVFRISEHEDGGISVELLELTHWVPGPIGMAGLRIARTTKRLTARQVLALPQ
A_all_C_03052190	2140918007	Soil	MRSWARRRSVVLVSDLRFYKTERGTIFRLKEDAEGRLSVELLQTSLWVQGPIGMAGLRVSPTTRQLTERQIQSLPQ
F24TB_102967673	3300000550	Soil	MAESSVYRTEHGKVFRISEHDDGGISVELLELTHWVPGPIGMAGLRIARTTKRLTARQVLALPQ*
JGI11643J11755_111757572	3300000787	Soil	MAXXSVYRTEXGKVFRISEHDDGGISVELLELTHWVPGPIGMAGLRIARTTKRLTARQVLALPQ*
JGI11615J12901_100946645	3300000953	Soil	FRISEHEDGGISVELLELTHWVPGPIGMAGLRIARTTKRLTARQVLALPQ*
Ga0055470_101077221	3300003992	Natural And Restored Wetlands	MRRSRKRRSVGAVSESSFYKTERGTIFRLKEDDEGRLSVELLQTSLWVQGPIGMAGLRVAPTTTKLTERQIQSLPQ
Ga0055435_101496251	3300003994	Natural And Restored Wetlands	NIYKTEQGTIFRLKEDDEGRISVELLQTSLWVQGPIGMAGLRVAPTTTRLTSRQIQSLPQ
Ga0055438_100197361	3300003995	Natural And Restored Wetlands	VSETNIYKTEQGTIFRLKEDDEGRISVELLQTSLWVQGPIGMAGLRVAPTTTRLTSRQIQSLPQ*
Ga0055467_100044096	3300003996	Natural And Restored Wetlands	SFYKTERGTIFRLKEDDEGRLSVELLQTSLWVQGPIGMAGLRVAPTTTKLTERQIQSLPQ
Ga0055466_100026191	3300003997	Natural And Restored Wetlands	MRRSRKRRSVGAVSESSFYKTERGTIFRLKEDDEGRLSVELLQTSLWVQGPIGMAGLRVAPTTTKLTERQIQSLPQ*
Ga0062589_1014076852	3300004156	Soil	MANWRRVWGVSESSFYKTEQGTIFRLKEDDEGRLSVELLQTSLWVQGPIGMAGLRVAPTTTKLTERQIQSLPQ*
Ga0062595_1000074213	3300004479	Soil	MRGAGNRRSVSEVSESSFYKTERGTIFRLKEDDEGRLSVELLQTSLWVQGPIGMAGLRVAPTTTKLTERQIQSLPQ*
Ga0062591_1019175102	3300004643	Soil	GVSESSFYKTEQGTIFRLKEDDEGRLSVELLQTSLWVQGPIGMAGLRVAPTTTKLTERQIQSLPQ*
Ga0062594_1017411662	3300005093	Soil	VSETKIYKTEQGTIFRLKEDDEGRISVELLQTSLWVQGPIGMAGLRVAPTTTQLTSRQIQSLPQ*
Ga0066869_100848511	3300005165	Soil	VSESSFYKTERGTIFRLKEDDEGRLSVELLQTSLWVQGPIGMAGLRVAPTTTKLTERQIQSLPQ*
Ga0066810_101966271	3300005169	Soil	MRRLGNRRSVGQVSESSFYKTERGTIFRLKEDDEGRLSVELLQTSLWVQGPIGMAGLRVAPTTTKLTERQIQSLPQ*
Ga0066678_104966721	3300005181	Soil	VNLSSVYKTEQGTIFRVSEDEEGRLSVELLKATDWVGGPIGMAGLRIAPTTTRLTARQVQ
Ga0070690_1013271052	3300005330	Switchgrass Rhizosphere	VSESSFYKTERGTIFRLKEDDEGRLSVELLQTSLWVQGPIGMAGLRVAPTTTKLTERQI
Ga0070671_1013894391	3300005355	Switchgrass Rhizosphere	VSETKIYKTEQGTIFRLKEDDEGRISVELLQTSLWVQGPIGM
Ga0070701_105739101	3300005438	Corn, Switchgrass And Miscanthus Rhizosphere	GLRPTGNWRRVRGVSESSFYKTEQGTIFRLKEDDEGRLSVELLQTSLWVQGPIGMAGLRVAPTTTKLTERQIQSLPQ*
Ga0070700_1005804511	3300005441	Corn, Switchgrass And Miscanthus Rhizosphere	VSQSSFYKTEQGTIFRLKEDDEGRLSVELLQTSLWVQGPIGMAGLRVAPTTTKLTERQIQSLPQ*
Ga0070663_1012099062	3300005455	Corn Rhizosphere	EQGTIFRLKEDDEGRLSVELLQTSLWVQGPIGMAGLRVAPTTTKLTERQIQSLPQ*
Ga0070699_1000401295	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	MADTSVYRTELGKVFRISEHDDGGLSVELLELSQWVPGPIGMAGLRIARTTKRLTARQVLALPH*
Ga0066698_105609771	3300005558	Soil	MADTSVYRTEHGKVFRISEHDDGGISVELLQLTHWVPGPIGMAGLRIARTTKRLTARQVLALPQ*
Ga0068859_1019641342	3300005617	Switchgrass Rhizosphere	VSESSFYKTEQGTIFRLKEDDEGRLSVELLQTSLWVQGPIGMAGLRVAPTTTKLTERQIQSL
Ga0068864_1012432521	3300005618	Switchgrass Rhizosphere	IYKTEQGTIFRLKEDDEGRISVELLQTSLWVQGPIGMAGLRVAPTTTRLTSRQIQSLPQ*
Ga0068870_111237372	3300005840	Miscanthus Rhizosphere	VRESSFYKTERGTIFRLKEDDEGRLSVELLQTSLWVQGPIGMAGLRVAPTTTKLTERQIQSLPQ*
Ga0075288_10402792	3300005874	Rice Paddy Soil	MRRSRKRRSVGAVSESSFYKTERGTIFRLKEDDEGRLSVELLQTSLWVQGPIGMAGLRVAPTTTKL
Ga0066656_101798815	3300006034	Soil	RSMADTSVYRTEHGKVFRISEHDDGGISVELLQLTHWVPGPIGMAGLRIARTTKRLTARQVLALPQ*
Ga0068865_1015954011	3300006881	Miscanthus Rhizosphere	VSETNIYKTEQGTIFRLKEDDEGRISVELLQTSLWVQGPIGMAGLRVAPTTT
Ga0066710_1015914611	3300009012	Grasslands Soil	EHGKVFRISEHDDGGISVELLQLTHWVPGPIGMAGLRIARTTKRLTARQVLALPQ
Ga0066710_1020677061	3300009012	Grasslands Soil	MADTSVYRTEHGKVFRISEHDDGGISVELLQLTHWVPGPIGMAGLRIARTTKRLTARQVLALPQ
Ga0099827_102806413	3300009090	Vadose Zone Soil	VNLSSVYKTEQGTIFRVSEDEEGRLSVELLKATDWVGGPIGMAGLRIAPTTTRLTARQVQALPR*
Ga0099827_113958791	3300009090	Vadose Zone Soil	MTETGVYRTELGTIFRISEGDEGHLSVQLLDRPLWVPGPIGMVGLRLAPTTTRLTARQVQALPA*
Ga0099827_118707502	3300009090	Vadose Zone Soil	VSDLRFYKTEQGTIFRLKEDAEGRLSVALLQTTLWVQGPIGMAGLRVSPTTRQLTERQIQSLPQ*
Ga0105056_10074652	3300009801	Groundwater Sand	MTDTSVYRTEHGKVFRISEHEDGGISVELLKLTQWVPGPIGMAGLRIARTTKRLTARQVLALPQ*
Ga0105063_10370812	3300009804	Groundwater Sand	ADTSVYRTELGKVFRISEHDDGGLSVELLELSQWVPGPIGMAGLRIARTTKRLTARQVLALPH*
Ga0105081_10895901	3300009806	Groundwater Sand	RRGRKWRILKVMAAMSVYRTELGKVFRISEHDDGGLSVELLQLTHWVPGPIGMAGLRIAPTTKRLTARQILALPQ*
Ga0105061_10431502	3300009807	Groundwater Sand	MAAMSVYRTELGKVFRISEHDDGGLSVELLQLTHWVPGPIGMAGLRIAPTTKRLTARQILALPQ*
Ga0105089_10106741	3300009809	Groundwater Sand	ILQVMAAMSVYRTELGKVFRISEHDDGGLSVELLQLTHWVPGPIGMAGLRIAPTTKRLTARQILALPQ*
Ga0105088_10854001	3300009810	Groundwater Sand	MADTSVYRTELGKVFRISEHDDGGLSVELLQLTHWVPGPIGMAGLRIAPTTKRLTARQILALPQ*
Ga0105084_10427562	3300009811	Groundwater Sand	MTDTSVYRTEHGKVFRISEHEDGGISVELLKLTQWVPGPIGMAGLRIARTTKRLTARQVLALPH*
Ga0105062_10064482	3300009817	Groundwater Sand	MSVYRTELGKVFRISEHDDGGLSVELLQLTHWVPGPIGMAGLRIAPTTKRLTARQILALPQ*
Ga0105072_10208951	3300009818	Groundwater Sand	SVYRTELGKVFRISEHDDGGLSVELLELSQWVPGPIGMAGLRIARTTKRLTARQVLALPH
Ga0105068_10238101	3300009836	Groundwater Sand	TELGKVFRISEHDDGGLSVELLELSQWVPGPIGMAGLRIARTTKRLTARQVLALPH*
Ga0127445_10653253	3300010085	Grasslands Soil	YRTEHGKVFRISEHDDGGISVELLQLTHWVPGPIGMAGLRIARTTKRLTARQVLALPQ*
Ga0127490_10522731	3300010093	Grasslands Soil	GKVFRISEHDDGGISVELLQLTHWVPGPIGMAGLRIARTTKRLTARQVLALPQ*
Ga0127500_10568372	3300010103	Grasslands Soil	HGKVFRISEHDDGGISVELLQLTHWVPGPIGMAGLRIARTTKRLTARQVLALPQ*
Ga0134071_100352712	3300010336	Grasslands Soil	MGDTSVYRTEHGKVFRISEHDDGGISVELLQLTHWVPGPIGMAGLRIARTTKRLTARQVLALPQ*
Ga0134128_126538401	3300010373	Terrestrial Soil	VSQSSFYKTEQGTIFRLKEDDEGRLSVELLQTNLWVQGPIGMAGLRVAPTTTTLTERQIQSLPQ*
Ga0136847_115630112	3300010391	Freshwater Sediment	VTKAGVYKTEQGTIIRVSEDGEGRLSVELLKRPDWVAAPIGMAGLRVAPTTTRLTARQVQSLPQ*
Ga0134127_105718043	3300010399	Terrestrial Soil	VSESSFYKTEQGTIFRLKEDDEGRLSVELLQTSLWVQGPIGMAGLRVAPTTTKLTERQIQSLPQ*
Ga0126354_10151301	3300010857	Boreal Forest Soil	YKTERGTIFRINETEEGHLSVELLKAAAWVAGPIGMAGLRVARETTRLTQRQVQALPS*
Ga0138514_1000754611	3300011003	Soil	VSETNIYKTEQGTIFRLKEDDEGRISVELLQTSLWVQGPIGMAGLRVAPTT
Ga0137374_100074329	3300012204	Vadose Zone Soil	MVDTSVYRTEHGKVFRISEHDDGGISVELLQLTHWVPGPIGMAGLRIARTTKRLTARQVLALPQ*
Ga0137374_103804352	3300012204	Vadose Zone Soil	MAAMSVYRTELGKVFRISEHDDGGLSVELLELTNWVPGPIGMAGLRIARTTKRLTARQVLALPQ*
Ga0137368_101910381	3300012358	Vadose Zone Soil	MADTSVYRTELGKVFRISEHDDGGLSVELLELSQWVPGPIGMAGLRIARTTKRLTARQVL
Ga0134054_10132112	3300012390	Grasslands Soil	FRISEHDDGGISVELLQLTHWVPGPIGMAGLRIARTTKRLTARQVLALPQ*
Ga0134043_10997012	3300012392	Grasslands Soil	VFRVSQDTDGHLSVQLLKATLWESAPIGMAGLRVAPTTTQLTERQVKALPR*
Ga0134051_10180121	3300012398	Grasslands Soil	RSLDRSRPRRIAYHKRSMADTSVYRTEHGKVFRISEHDDGGISVELLQLTHWVPGPIGMAGLRIARTTKRLTARQVLALPQ*
Ga0134048_10281582	3300012400	Grasslands Soil	DTSVYRTEHGKVFRISEHDDGGISVELLQLTHWVPGPIGMAGLRIARTTKRLTARQVLALPQ*
Ga0134059_12581901	3300012402	Grasslands Soil	TSVYRTEHGKVFRISEHDDGGISVELLQLTHWVPGPIGMAGLRIARTTKRLTARQVLALPQ*
Ga0120158_101464661	3300013772	Permafrost	VSDLRFYKTERGTIFRLKEDAEGRLSVELLQTSLWVQGPIGMAGLRVSPTTRQLTERQIQSLPQ*
Ga0137409_109698873	3300015245	Vadose Zone Soil	MLVSDLRFYKTEQGTIFRLKEDAEGRLSVELLQTSLWVQGPIGMAGLRISPTTRQLTERQIQSLPQ*
Ga0132258_101275324	3300015371	Arabidopsis Rhizosphere	VSETKIYKTEQGTIFRLKEDDEGRLSVELLQTSLWVQGPIGMAGLRVAPTTTQLTSRQIQSLPQ*
Ga0132256_1018320882	3300015372	Arabidopsis Rhizosphere	VSQSSFYKTEQGTIFRLKEDDEGRLSVELLQTSLWVQGPIGMAGLRVSPTTTKLTERQIQSLPQ*
Ga0134083_103266142	3300017659	Grasslands Soil	YHKRSMADTSVYRTEHGKVFRISEHDDGGISVELLQLTHWVPGPIGMAGLRIARTTKRLTARQVLALPQ
Ga0187785_101217902	3300017947	Tropical Peatland	VRDTGVYRTERGTILRISADAEGRLSVELLDGSEQWVPGPIGMAGLRVAPTTTRLTATQVQALPK
Ga0187785_105644062	3300017947	Tropical Peatland	VSDTGVYRTERGTILRISADAEGRLSVELLDPSAQWVPGPIGMAGLRVAPTTRRLTANQIQALPK
Ga0187776_103842592	3300017966	Tropical Peatland	MQMSDAGVYRTERGTILRISADPEGRLSVELLDGSAGWVPGPIGMAGLRIAPTTTRLTASQIRALPQ
Ga0184610_11038061	3300017997	Groundwater Sediment	HGKAVCYRFMAESSVYRTEHGKVFRISEHDDGGISVELLQITHWVPGPIGMAGLRIARTTKRLTARQVLALPQ
Ga0184605_100306331	3300018027	Groundwater Sediment	VKIYKTERGTIFRLKEDDEGRLSVELLQTSLWVQGPIGMAGLRVSPTTTQLTSRQIQSLP
Ga0184605_103061822	3300018027	Groundwater Sediment	VSESSFYKTEQGTIFRLKEDDEGRLSVELLQTSLWVQGPIGMAGLRVAPTTTKLTERQIQSLPQ
Ga0184608_100029633	3300018028	Groundwater Sediment	MAESSVYRTEHGKVFRISEHDDGGISVELLQITHWVPGPIGMAGLRIARTTKRLTARQVLALPQ
Ga0187787_103426732	3300018029	Tropical Peatland	MVSDSGVYRTERGTILRISADAEGRLSVELLDGTARWVPGPIGMAGLRVAPTTRRLTANQVQALPK
Ga0184634_103242282	3300018031	Groundwater Sediment	MADTSVYRTEHGKVFRISEHEDGGISVELLKLTQWVPGPIGMAGLRIARTTKRLTARQVLALPQ
Ga0187788_100107361	3300018032	Tropical Peatland	MRVSGAGVYRTEGGTILRISADAEGRLSVELLDGSAGWVPGPIGMAGLRIAPTTTRLTASQVRALPQ
Ga0187788_100326563	3300018032	Tropical Peatland	MRVSDAGVYRTERGTILRISADAEGRLSVELLDGSAGWVPGPIGMAGLRIAPTTTRLTASQIRALPQ
Ga0184626_104230041	3300018053	Groundwater Sediment	SVYRTELGKVFRISEHDDGGLSVELLDLTHWVPGPIGMAGLRIAPTTTRLTARQILALPQ
Ga0184623_105032511	3300018056	Groundwater Sediment	MADTSVYRTELGKVFRISEHDDGGLSVELLDLTHWVPGPIGMAGLRIAPTTTRLTARQILALPQ
Ga0184619_100496332	3300018061	Groundwater Sediment	VSDVKIYKTERGTIFRLKEDDEGRLSVELLQTSLWVQGPIGMAGLRVSPTTTQLTSRQIQSLPQ
Ga0184618_100468343	3300018071	Groundwater Sediment	MRRSGNRRSVGAVSESSFYKTERGTIFRLKEDDEGRLSVELLQTSLWVQGPIGMAGLRVAPTTTKLTERQIQSLPQ
Ga0184618_101505331	3300018071	Groundwater Sediment	VSDVKIYKTERGTIFRLKEDDEGRLSVELLQTSLWVQGPIGMAGLRVSPTTRQLTSRQIQSLPQ
Ga0184633_103125302	3300018077	Groundwater Sediment	MQTGVYRTELGTVFRTSEDDDGRLSVELLKLSLWIPGPIGMAGLRVAPTTTRLTTRQVQALP
Ga0184612_103180731	3300018078	Groundwater Sediment	VSETKIYKTEQGTIFRLKEDDEGRISVELLQTSLWVQGPIGMAGLRVAPTTTQLTSRQVQSLPQ
Ga0184627_106541322	3300018079	Groundwater Sediment	MQTGVYRTELGTVFRTSEDDDGRLSVELLKLSLWIPGPIGMAGLRVAPTTTRL
Ga0187774_109321381	3300018089	Tropical Peatland	MQMSDAGVYRTERGTILRISADPEGRLSVELLDGSAGWVPGPIGMAGLRIAPTTTRLTASQIR
Ga0190274_113383342	3300018476	Soil	MADTSVYRTEHGKVFRISEHDDGGISVELLELTHWVPGPIGMAGLRIARTTKRLTARQVLALPQ
Ga0184645_11731842	3300019233	Groundwater Sediment	SVYRTEHGKVFRISEHDDGGISVELLQLTQWVPGPIGMAGLRIARTTKRLTARQVLALPQ
Ga0184646_10629332	3300019259	Groundwater Sediment	RTEHGKVFRISEHDDGGISVELLQITHWVPGPIGMAGLRIARTTKRLTARQVLALPQ
Ga0187792_12177232	3300019265	Peatland	MRVSGAGVYRTEGGTILRISADAEGRLSVELLDGSAGWVPGPIGMAGLRIAPTTTRLTASQIRAPPQ
Ga0210382_100197325	3300021080	Groundwater Sediment	MRRSGNRRSVDGVSESSFYKTERGTIFRLKEDDEGRLSVELLQTSLWVQGPIGMAGLRVAPTTTKLTERQIQSLPQ
Ga0209341_106627421	3300025325	Soil	RRILEVMAAMSVYRTELGKVFRISEHDDGGLSVELLDLTHWVPGPIGMAGLRIAPTTKRLTARQILALPQ
Ga0207643_102321152	3300025908	Miscanthus Rhizosphere	VRESSFYKTERGTIFRLKEDDEGRLSVELLQTSLWVQGPIGMAGLRVAPTTTKLTERQIQSLPQ
Ga0207643_105439333	3300025908	Miscanthus Rhizosphere	VSESSFYKTEQGTIFRLKEDDEGRLSIELLQTSLWVQGPIGMAG
Ga0207668_121053471	3300025972	Switchgrass Rhizosphere	VSESSFYKTERGTIFRLKEDDEGRLSVELLQTSIWVQGPIGMAGLRVAPTTT
Ga0207640_115757561	3300025981	Corn Rhizosphere	ESSFYKTEQGTIFRLKEDDEGRLSVELLQTSLWVQGPIGMAGLRVAPTTTKLTERQIQSLPQ
Ga0207678_106472753	3300026067	Corn Rhizosphere	FYKTEQGTIFRLKEDDEGRLSVELLQTSLWVQGPIGMAGLRVAPTTTKLTERQIQSLPQ
Ga0207683_112315862	3300026121	Miscanthus Rhizosphere	VSETNIYKTEQGTIFRLKEDDEGRISVELLQTSLWVQGPIGMAGLRVAPTTTQLTSRQIQSLPQ
Ga0209879_10006302	3300027056	Groundwater Sand	MTDTSVYRTEHGKVFRISEHEDGGISVELLKLTQWVPGPIGMAGLRIARTTKRLTARQVLALPQ
Ga0209846_10484141	3300027277	Groundwater Sand	GKVFRISEHDDGGLSVELLQLTHWVPGPIGMAGLRIAPTTKRLTARQILALPQ
Ga0209861_10172083	3300027332	Groundwater Sand	MAAMSVYRTELGKVFRISEHDDGGLSVELLQLTHWVPGPIGMAGLRIAPTTKRLTARQILALPQ
Ga0209899_10107953	3300027490	Groundwater Sand	MADTSVYRTELGKVFRISEHDDGGLSVELLELSQWVPGPIGMAGLRIARTTKRLTARQVLALPH
Ga0209023_100270244	3300027870	Freshwater And Sediment	MTYPDWVTKAGVYKTEQGTIIRVSEDGEGRLSVELLKRPDWVAAPIGMAGLRVAPTTTRLTARQVQSLPQ
Ga0209590_102538242	3300027882	Vadose Zone Soil	VNLSSVYKTEQGTIFRVSEDEEGRLSVELLKATDWVGGPIGMAGLRIAPTTTRLTARQVQALPR
Ga0209590_106925631	3300027882	Vadose Zone Soil	MTETGVYRTELGTIFRISEGDEGHLSVQLLDRPLWVPGPIGMVGLRLAPTTTR
Ga0209860_10054132	3300027949	Groundwater Sand	MSVYRTELGKVFRISEHDDGGLSVELLQLTHWVPGPIGMAGLRIAPTTKRLTARQILALP
Ga0307282_104292502	3300028784	Soil	MRLRPNWSSVGNVSESSFYKTEQGTIFRLKEDDEGRLSVELLQTSLWVQGPIGMAGLRVAPTTTKLTERQIQSLPQ
Ga0307281_100704781	3300028803	Soil	TERGTIFRLKEDDEGRLSVELLQTSLWVQGPIGMAGLRVAPTTTKLTERQIQSLPQ
Ga0307310_106312721	3300028824	Soil	GEEWRILKVVAEKSVYRTELGKVFRISEHDDGGLSVELLQLTQWVPGPIGMAGLRIARTTTRLTARQILALPQ
Ga0307312_103732351	3300028828	Soil	EKSVYRTELGKVFRISEHDDGGLSVELLQLTQWVPGPIGMAGLRIARTTTRLTARQILALPQ
Ga0307278_100094518	3300028878	Soil	EEGPGRFRTPGHGKAVCYRFMAESSVYRTEHGKVFRISEHDDGGISVELLAITHWVPGPIGMAGLRIARTTKRLTARQVLALPQ
Ga0307308_106405762	3300028884	Soil	MRLRPNWSSVGRVSESSFYKTEQGTIFRLKEDDEGRLSVELLQTSLWVQGPIGMAGLRVAPTTTKLTERQIQSLPQ
Ga0308196_10601851	3300030989	Soil	ELGKVFRISEHDDGGLSVELLDLTHWVPGPIGMAGLRIAPTTTRLTARQILALPQ
Ga0308190_11008331	3300030993	Soil	VYRTEHGKVFRISEHDDGGISVELLQITHWVPGPIGMAGLRIARTTKRLTARQVLALPQ
Ga0307497_101771892	3300031226	Soil	VSETKIYKTEQGTIFRLKEDDEGRLSVELLQTSLWVQGPIGMAGLRVAPTTTQLTSRQIQSLPQ
Ga0247727_111866171	3300031576	Biofilm	VTKAGVYKTEHGTIIRVSEDGEGRLSVELLKRPDWVAAPIGMAGLRVAPTTTRLTARQVQSLPQ
Ga0214473_102000145	3300031949	Soil	MAYPRWVAKAGVYKTEHGTIIRVSEDGEGRLSVELLKRPDWVAAPIGMAGLRVAPTTTRLTARQVQSLPQ
Ga0326597_103880443	3300031965	Soil	MAYPGWVTKDGVYKTEHGTIIRVSEDGEGRLSVELLKRPDWVAAPIGMAGLRVAPTTTRLTARQVQSLPQ
Ga0315278_105337061	3300031997	Sediment	MTYPDWVTKAGVYKTEQGTIIRVSEDGEGRLSVELLKRPDWVAAPIGMAGLRVAP
Ga0315287_121153851	3300032397	Sediment	QGTIIRVSEDGEGRLSVELLKRPDWVAAPIGMAGLRVAPTTTRLTARQVQSLPQ
Ga0335081_107929423	3300032892	Soil	VSETNVYRTGEGTIFRIREDEEGRLSVELLKTPLWVAGPIGMAGLRIAPTTRRLTPRQIERLPE
Ga0214472_100415585	3300033407	Soil	MSVYRTELGKVFRISEHDDGGLSVELLELTHWVPGPIGMAGLRIARTTKRLTARQVLALP
Ga0370498_010040_829_1059	3300034155	Untreated Peat Soil	MRGSANRRRVVAVSESSFYKTEQGTIFRLKEDDEGRLSVELLQTSLWVQGPIGMAGLRVAPTTTKLTERQIQSLPQ
Ga0364940_0019899_644_838	3300034164	Sediment	MADTSVYRTELGKVFRISEHDDGGLSVELLDLTHWVPGPIGMAGLRIAPTTTRLTARQVLALPQ
Ga0370545_117003_97_300	3300034643	Soil	VSEVSESSFYKTERGTIFRLKEDDEGRLSVELLQTSLWVQGPIGMAGLRVAPTTTKLTERQIQSLPQ
Ga0370545_130405_141_335	3300034643	Soil	VSESSFYKTEQGTIFRLKEDDEGRLSVELLQTSLWVQGPIGMAGLRVAPTTTKLTQRQIQSLPQ

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F062507

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences