Metagenome / Metatranscriptome Family F062287

Basic Information
Family ID	F062287
Family Type	Metagenome / Metatranscriptome
Number of Sequences	131
Average Sequence Length	66 residues
Representative Sequence	VGQGEAMHGSRQTRLPVEAIEKTLDVLVVERQRLHEQHSGPEPLEANRRAILYWQRELAEARRPTSASA
Number of Associated Samples	109
Number of Associated Scaffolds	131

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	72.52 %
% of genes near scaffold ends (potentially truncated)	42.75 %
% of genes from short scaffolds (< 2000 bps)	83.97 %
Associated GOLD sequencing projects	107
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.64

Most Common Taxonomy
Group	Unclassified (59.542 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (22.901 % of family members)
Environment Ontology (ENVO)	Unclassified (26.718 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (59.542 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 43.30% β-sheet: 0.00% Coil/Unstructured: 56.70%
Feature Viewer

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Pfam ID	Name	% Frequency in 131 Family Scaffolds
PF00072	Response_reg	3.82
PF06897	DUF1269	2.29
PF05239	PRC	1.53
PF00027	cNMP_binding	1.53
PF01230	HIT	1.53
PF03129	HGTP_anticodon	0.76
PF13602	ADH_zinc_N_2	0.76
PF03853	YjeF_N	0.76
PF02566	OsmC	0.76
PF14490	HHH_4	0.76
PF03992	ABM	0.76
PF01957	NfeD	0.76
PF05988	DUF899	0.76
PF03575	Peptidase_S51	0.76
PF14534	DUF4440	0.76
PF03979	Sigma70_r1_1	0.76
PF11950	DUF3467	0.76
PF04185	Phosphoesterase	0.76
PF01527	HTH_Tnp_1	0.76
PF03450	CO_deh_flav_C	0.76
PF07366	SnoaL	0.76
PF03793	PASTA	0.76

COG ID	Name	Functional Category	% Frequency in 131 Family Scaffolds
COG4803	Uncharacterized membrane protein	Function unknown [S]	2.29
COG0062	NAD(P)H-hydrate repair enzyme Nnr, NAD(P)H-hydrate epimerase domain	Nucleotide transport and metabolism [F]	0.76
COG0124	Histidyl-tRNA synthetase	Translation, ribosomal structure and biogenesis [J]	0.76
COG0423	Glycyl-tRNA synthetase, class II	Translation, ribosomal structure and biogenesis [J]	0.76
COG0441	Threonyl-tRNA synthetase	Translation, ribosomal structure and biogenesis [J]	0.76
COG0442	Prolyl-tRNA synthetase	Translation, ribosomal structure and biogenesis [J]	0.76
COG0568	DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32)	Transcription [K]	0.76
COG1764	Organic hydroperoxide reductase OsmC/OhrA	Defense mechanisms [V]	0.76
COG1765	Uncharacterized OsmC-related protein	General function prediction only [R]	0.76
COG3511	Phospholipase C	Cell wall/membrane/envelope biogenesis [M]	0.76
COG4312	Predicted dithiol-disulfide oxidoreductase, DUF899 family	General function prediction only [R]	0.76

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.54 %
All Organisms	root	All Organisms	40.46 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.54 %
cellular organisms	root	All Organisms → cellular organisms	40.46 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.54 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	40.46 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.54 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	33.59 %
Nitrospirae	phylum	All Organisms → cellular organisms → Bacteria → Nitrospirae	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.54 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	32.06 %
unclassified Nitrospirae	no rank	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.54 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	19.85 %
unclassified Actinobacteria	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria	1.53 %
Nitrospirae bacterium	species	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.54 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	18.32 %
Actinobacteria bacterium 13_1_20CM_4_68_12	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium 13_1_20CM_4_68_12	1.53 %
Nitrospirae bacterium	species	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.54 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	18.32 %
Actinobacteria bacterium 13_1_20CM_4_68_12	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium 13_1_20CM_4_68_12	1.53 %
Nitrospirae bacterium	species	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium	0.76 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2124908016\|OU_2_1_1_newblercontig133282	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	633	Open in IMG/M
2170459018\|G1P06HT02HU18O	Not Available	624	Open in IMG/M
3300000890\|JGI11643J12802_11265088	Not Available	574	Open in IMG/M
3300000955\|JGI1027J12803_107567339	Not Available	1019	Open in IMG/M
3300000956\|JGI10216J12902_105415140	Not Available	928	Open in IMG/M
3300000956\|JGI10216J12902_105735140	Not Available	625	Open in IMG/M
3300001361\|A30PFW6_1042632	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	728	Open in IMG/M
3300001538\|A10PFW1_10634772	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	666	Open in IMG/M
3300002911\|JGI25390J43892_10001381	All Organisms → cellular organisms → Bacteria	5018	Open in IMG/M
3300004480\|Ga0062592_100563231	Not Available	959	Open in IMG/M
3300005175\|Ga0066673_10038030	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2359	Open in IMG/M
3300005175\|Ga0066673_10592747	All Organisms → cellular organisms → Bacteria	646	Open in IMG/M
3300005176\|Ga0066679_10480117	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	812	Open in IMG/M
3300005179\|Ga0066684_10791818	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	627	Open in IMG/M
3300005445\|Ga0070708_100004050	All Organisms → cellular organisms → Bacteria	11518	Open in IMG/M
3300005445\|Ga0070708_100685471	Not Available	965	Open in IMG/M
3300005542\|Ga0070732_10546799	All Organisms → cellular organisms → Bacteria → Terrabacteria group	702	Open in IMG/M
3300005545\|Ga0070695_100022648	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3855	Open in IMG/M
3300005552\|Ga0066701_10466319	Not Available	784	Open in IMG/M
3300005555\|Ga0066692_10894355	Not Available	544	Open in IMG/M
3300005559\|Ga0066700_10855614	Not Available	608	Open in IMG/M
3300005574\|Ga0066694_10460871	Not Available	594	Open in IMG/M
3300005575\|Ga0066702_10235651	Not Available	1115	Open in IMG/M
3300005587\|Ga0066654_10396177	Not Available	753	Open in IMG/M
3300006034\|Ga0066656_10105378	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1718	Open in IMG/M
3300006034\|Ga0066656_11059594	Not Available	521	Open in IMG/M
3300006046\|Ga0066652_101245177	Not Available	704	Open in IMG/M
3300006173\|Ga0070716_100011727	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	4419	Open in IMG/M
3300006804\|Ga0079221_10381388	Not Available	865	Open in IMG/M
3300006904\|Ga0075424_102881280	Not Available	500	Open in IMG/M
3300009012\|Ga0066710_101698542	Not Available	961	Open in IMG/M
3300009137\|Ga0066709_100068235	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4156	Open in IMG/M
3300009137\|Ga0066709_100119612	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	3287	Open in IMG/M
3300009137\|Ga0066709_100165270	All Organisms → cellular organisms → Bacteria	2855	Open in IMG/M
3300009162\|Ga0075423_11011549	Not Available	883	Open in IMG/M
3300010039\|Ga0126309_10783720	Not Available	621	Open in IMG/M
3300010303\|Ga0134082_10415393	Not Available	577	Open in IMG/M
3300010321\|Ga0134067_10228458	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	694	Open in IMG/M
3300010323\|Ga0134086_10310578	Not Available	614	Open in IMG/M
3300010325\|Ga0134064_10173717	Not Available	758	Open in IMG/M
3300010329\|Ga0134111_10230480	Not Available	755	Open in IMG/M
3300011003\|Ga0138514_100031988	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1001	Open in IMG/M
3300011994\|Ga0120157_1097479	Not Available	579	Open in IMG/M
3300012011\|Ga0120152_1032821	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1819	Open in IMG/M
3300012019\|Ga0120139_1049833	Not Available	998	Open in IMG/M
3300012198\|Ga0137364_10019027	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium 13_1_20CM_4_68_12	4176	Open in IMG/M
3300012198\|Ga0137364_10109057	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1960	Open in IMG/M
3300012199\|Ga0137383_11166679	Not Available	555	Open in IMG/M
3300012200\|Ga0137382_10016438	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium 13_1_20CM_4_68_12	4132	Open in IMG/M
3300012200\|Ga0137382_10164095	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1513	Open in IMG/M
3300012200\|Ga0137382_11068303	Not Available	578	Open in IMG/M
3300012200\|Ga0137382_11129780	Not Available	559	Open in IMG/M
3300012201\|Ga0137365_10445042	Not Available	954	Open in IMG/M
3300012204\|Ga0137374_10105400	All Organisms → cellular organisms → Bacteria	2643	Open in IMG/M
3300012204\|Ga0137374_11125100	Not Available	557	Open in IMG/M
3300012206\|Ga0137380_10774303	Not Available	829	Open in IMG/M
3300012208\|Ga0137376_10382060	Not Available	1223	Open in IMG/M
3300012210\|Ga0137378_10477575	Not Available	1153	Open in IMG/M
3300012211\|Ga0137377_10376391	Not Available	1357	Open in IMG/M
3300012285\|Ga0137370_10418886	Not Available	813	Open in IMG/M
3300012350\|Ga0137372_10063445	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3209	Open in IMG/M
3300012350\|Ga0137372_10285613	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium	1284	Open in IMG/M
3300012351\|Ga0137386_10197831	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1444	Open in IMG/M
3300012353\|Ga0137367_11007269	Not Available	568	Open in IMG/M
3300012353\|Ga0137367_11149982	Not Available	522	Open in IMG/M
3300012354\|Ga0137366_10102837	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2164	Open in IMG/M
3300012359\|Ga0137385_11261690	Not Available	601	Open in IMG/M
3300012360\|Ga0137375_10777001	Not Available	773	Open in IMG/M
3300012908\|Ga0157286_10285029	Not Available	598	Open in IMG/M
3300012912\|Ga0157306_10202481	Not Available	668	Open in IMG/M
3300012938\|Ga0162651_100024340	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	851	Open in IMG/M
3300012951\|Ga0164300_10494182	Not Available	698	Open in IMG/M
3300012958\|Ga0164299_10082730	Not Available	1616	Open in IMG/M
3300012960\|Ga0164301_10060924	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1997	Open in IMG/M
3300012961\|Ga0164302_10178438	Not Available	1283	Open in IMG/M
3300013501\|Ga0120154_1093407	Not Available	690	Open in IMG/M
3300013763\|Ga0120179_1097797	Not Available	649	Open in IMG/M
3300013764\|Ga0120111_1022836	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1742	Open in IMG/M
3300013765\|Ga0120172_1043267	Not Available	1190	Open in IMG/M
3300013768\|Ga0120155_1086450	Not Available	886	Open in IMG/M
3300014745\|Ga0157377_11339708	Not Available	561	Open in IMG/M
3300014827\|Ga0120171_1021066	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2518	Open in IMG/M
3300017654\|Ga0134069_1160338	Not Available	755	Open in IMG/M
3300018027\|Ga0184605_10020739	All Organisms → cellular organisms → Bacteria	2632	Open in IMG/M
3300018028\|Ga0184608_10054264	Not Available	1586	Open in IMG/M
3300018028\|Ga0184608_10340286	Not Available	659	Open in IMG/M
3300018061\|Ga0184619_10304820	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	730	Open in IMG/M
3300018061\|Ga0184619_10415157	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	606	Open in IMG/M
3300018431\|Ga0066655_10206069	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1220	Open in IMG/M
3300018433\|Ga0066667_10054770	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2430	Open in IMG/M
3300018433\|Ga0066667_10116983	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1813	Open in IMG/M
3300018433\|Ga0066667_10253288	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1336	Open in IMG/M
3300018482\|Ga0066669_10034633	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3029	Open in IMG/M
3300019361\|Ga0173482_10557136	Not Available	568	Open in IMG/M
3300019867\|Ga0193704_1084626	Not Available	576	Open in IMG/M
3300019869\|Ga0193705_1045383	Not Available	919	Open in IMG/M
3300020170\|Ga0179594_10196276	Not Available	755	Open in IMG/M
3300021080\|Ga0210382_10071591	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1404	Open in IMG/M
3300021080\|Ga0210382_10466208	Not Available	559	Open in IMG/M
3300021418\|Ga0193695_1019868	Not Available	1406	Open in IMG/M
3300025898\|Ga0207692_10112179	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1514	Open in IMG/M
3300025915\|Ga0207693_10020616	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	5241	Open in IMG/M
3300025939\|Ga0207665_10003846	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	10038	Open in IMG/M
3300026295\|Ga0209234_1305181	Not Available	511	Open in IMG/M
3300026301\|Ga0209238_1153482	Not Available	698	Open in IMG/M
3300026301\|Ga0209238_1271910	Not Available	508	Open in IMG/M
3300026547\|Ga0209156_10359467	Not Available	625	Open in IMG/M
3300027725\|Ga0209178_1197402	Not Available	711	Open in IMG/M
3300028536\|Ga0137415_10429966	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1126	Open in IMG/M
3300028713\|Ga0307303_10016759	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1366	Open in IMG/M
3300028714\|Ga0307309_10091560	Not Available	716	Open in IMG/M
3300028715\|Ga0307313_10098117	Not Available	889	Open in IMG/M
3300028719\|Ga0307301_10139424	Not Available	778	Open in IMG/M
3300028755\|Ga0307316_10055943	All Organisms → cellular organisms → Bacteria	1331	Open in IMG/M
3300028807\|Ga0307305_10264665	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	785	Open in IMG/M
3300028811\|Ga0307292_10428414	Not Available	564	Open in IMG/M
3300028819\|Ga0307296_10632336	Not Available	586	Open in IMG/M
3300028824\|Ga0307310_10212575	Not Available	917	Open in IMG/M
3300028828\|Ga0307312_10023052	All Organisms → cellular organisms → Bacteria	3566	Open in IMG/M
3300028828\|Ga0307312_10119454	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1650	Open in IMG/M
3300028828\|Ga0307312_10512507	Not Available	792	Open in IMG/M
3300028828\|Ga0307312_10905960	Not Available	584	Open in IMG/M
3300028876\|Ga0307286_10181483	Not Available	760	Open in IMG/M
3300028880\|Ga0307300_10236857	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	602	Open in IMG/M
3300028884\|Ga0307308_10082521	Not Available	1525	Open in IMG/M
3300028885\|Ga0307304_10050405	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1539	Open in IMG/M
3300031421\|Ga0308194_10288470	Not Available	564	Open in IMG/M
3300031740\|Ga0307468_100830389	Not Available	792	Open in IMG/M
3300032180\|Ga0307471_102901142	Not Available	609	Open in IMG/M
3300033412\|Ga0310810_11424329	Not Available	526	Open in IMG/M
3300033475\|Ga0310811_10240990	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2153	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	96.95%
Host-Associated	Host-Associated	2.29%
Engineered	Engineered	0.76%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	90.84%
Aquatic	Environmental → Aquatic	5.34%
Plants	Host-Associated → Plants	2.29%
Unclassified	Environmental → Unclassified	0.76%
Solid Waste	Engineered → Solid Waste	0.76%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	89.31%
Sediment	Environmental → Aquatic → Sediment	3.82%
Rhizosphere	Host-Associated → Plants → Rhizosphere	2.29%
Freshwater	Environmental → Aquatic → Freshwater	1.53%
Agricultural Field	Environmental → Terrestrial → Agricultural Field	1.53%
Unclassified	Environmental → Unclassified → Unclassified	0.76%
Grass	Engineered → Solid Waste → Grass	0.76%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	82.44%
Loam	Environmental → Terrestrial → Soil → Loam	6.87%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	3.82%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	2.29%
Sediment	Environmental → Aquatic → Freshwater → Sediment	1.53%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified	1.53%
Unclassified	Environmental → Unclassified → Unclassified → Unclassified	0.76%
Composting	Engineered → Solid Waste → Grass → Composting	0.76%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	48.09%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	22.14%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	8.40%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	5.34%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	3.82%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	2.29%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	2.29%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	1.53%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	1.53%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	1.53%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified	1.53%
Unclassified	Environmental → Unclassified → Unclassified → Unclassified → Unclassified	0.76%
Unclassified	Engineered → Solid Waste → Grass → Composting → Unclassified	0.76%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	22.90%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	19.08%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	12.21%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	9.92%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost	8.40%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	5.34%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	4.58%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	3.82%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	1.53%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.53%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.53%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	1.53%
Soil	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified → Soil	1.53%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	1.53%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	0.76%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.76%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.76%
	Environmental → Unclassified → Unclassified → Unclassified → Unclassified →	0.76%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.76%
Switchgrass, Maize And Mischanthus Litter	Engineered → Solid Waste → Grass → Composting → Unclassified → Switchgrass, Maize And Mischanthus Litter	0.76%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2124908016	Sample 642	Environmental	Open in IMG/M
2170459018	Litter degradation MG2	Engineered	Open in IMG/M
3300000890	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000955	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300001361	Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - (A30-PF)- 6 month illumina	Environmental	Open in IMG/M
3300001538	Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - (A10-PF 4A)- 1 week illumina	Environmental	Open in IMG/M
3300002911	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_2_20cm	Environmental	Open in IMG/M
3300004480	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4	Environmental	Open in IMG/M
3300005175	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122	Environmental	Open in IMG/M
3300005176	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128	Environmental	Open in IMG/M
3300005179	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005542	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1	Environmental	Open in IMG/M
3300005545	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG	Environmental	Open in IMG/M
3300005552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150	Environmental	Open in IMG/M
3300005555	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141	Environmental	Open in IMG/M
3300005559	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149	Environmental	Open in IMG/M
3300005574	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_143	Environmental	Open in IMG/M
3300005575	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_151	Environmental	Open in IMG/M
3300005587	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_103	Environmental	Open in IMG/M
3300006034	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_105	Environmental	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006804	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200	Environmental	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300010039	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot56	Environmental	Open in IMG/M
3300010303	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09182015	Environmental	Open in IMG/M
3300010321	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09212015	Environmental	Open in IMG/M
3300010323	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010325	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_2_0_1 metaG	Environmental	Open in IMG/M
3300010329	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_11112015	Environmental	Open in IMG/M
3300011003	Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t9i015	Environmental	Open in IMG/M
3300011994	Permafrost microbial communities from Nunavut, Canada - A7_65cm_12M	Environmental	Open in IMG/M
3300012011	Permafrost microbial communities from Nunavut, Canada - A30_65cm_6M	Environmental	Open in IMG/M
3300012019	Permafrost microbial communities from Nunavut, Canada - A7_5cm_12M	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012204	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012285	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaG	Environmental	Open in IMG/M
3300012350	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_60_16 metaG	Environmental	Open in IMG/M
3300012351	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaG	Environmental	Open in IMG/M
3300012353	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_80_16 metaG	Environmental	Open in IMG/M
3300012354	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_60_16 metaG	Environmental	Open in IMG/M
3300012359	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG	Environmental	Open in IMG/M
3300012360	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_113_16 metaG	Environmental	Open in IMG/M
3300012908	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S089-202R-1	Environmental	Open in IMG/M
3300012912	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S163-409C-2	Environmental	Open in IMG/M
3300012938	Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t2i015	Environmental	Open in IMG/M
3300012951	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MG	Environmental	Open in IMG/M
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300013501	Permafrost microbial communities from Nunavut, Canada - A35_65cm_0.25M	Environmental	Open in IMG/M
3300013763	Permafrost microbial communities from Nunavut, Canada - A15_65cm_0M	Environmental	Open in IMG/M
3300013764	Permafrost microbial communities from Nunavut, Canada - A28_35cm_6M	Environmental	Open in IMG/M
3300013765	Permafrost microbial communities from Nunavut, Canada - A30_80cm_6M	Environmental	Open in IMG/M
3300013768	Permafrost microbial communities from Nunavut, Canada - A35_65cm_0M	Environmental	Open in IMG/M
3300014745	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG	Host-Associated	Open in IMG/M
3300014827	Permafrost microbial communities from Nunavut, Canada - A3_80cm_18M	Environmental	Open in IMG/M
3300017654	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300018027	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_coex	Environmental	Open in IMG/M
3300018028	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_coex	Environmental	Open in IMG/M
3300018061	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_b1	Environmental	Open in IMG/M
3300018431	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300019361	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S133-311R-2 (version 2)	Environmental	Open in IMG/M
3300019867	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3m1	Environmental	Open in IMG/M
3300019869	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3m2	Environmental	Open in IMG/M
3300020170	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad1_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300021080	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_coex redo	Environmental	Open in IMG/M
3300021418	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3s2	Environmental	Open in IMG/M
3300025898	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025939	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026295	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_20cm (SPAdes)	Environmental	Open in IMG/M
3300026301	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_20cm (SPAdes)	Environmental	Open in IMG/M
3300026547	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124 (SPAdes)	Environmental	Open in IMG/M
3300027725	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200 (SPAdes)	Environmental	Open in IMG/M
3300028536	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300028713	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_184	Environmental	Open in IMG/M
3300028714	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_196	Environmental	Open in IMG/M
3300028715	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_203	Environmental	Open in IMG/M
3300028719	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_182	Environmental	Open in IMG/M
3300028755	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_356	Environmental	Open in IMG/M
3300028807	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_186	Environmental	Open in IMG/M
3300028811	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_149	Environmental	Open in IMG/M
3300028819	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_153	Environmental	Open in IMG/M
3300028824	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_197	Environmental	Open in IMG/M
3300028828	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_202	Environmental	Open in IMG/M
3300028876	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_140	Environmental	Open in IMG/M
3300028880	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_181	Environmental	Open in IMG/M
3300028884	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_195	Environmental	Open in IMG/M
3300028885	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_185	Environmental	Open in IMG/M
3300031421	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_195 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300033412	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NC	Environmental	Open in IMG/M
3300033475	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YC	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
OU_02062690	2124908016		RDAMRGSRQTRLPVEAIEKTLDVLVVERQRLHEQHSGPEPLEANRRAISYWQRELAEARRPDQRVG
2MG_01277610	2170459018	Switchgrass, Maize And Mischanthus Litter	VEKTLDVFGVERQRLHEQHSGPEPLEANRLAIVYWQRELAEARRSTSASA
JGI11643J12802_112650881	3300000890	Soil	VGQGRVIHGSRQTRLPVEAIEKTLDALVVERQRLHEQQSGPEPLEANRRAILFWQRELAEARRPTSESA*
JGI1027J12803_1075673392	3300000955	Soil	VGQGELHGSRQTRLPVEAIEKTLDVLIVERQRLHEQHAGPDPLEANRLAIAYWQREFAEARRSTSASPYKLHHRV*
JGI10216J12902_1054151402	3300000956	Soil	VGQRDAMRGSRQTRLPVEAIEKTLDILVVERQRLHEQRSGPEPLEANRRAISYWQRELAEARRPDQRVR*
JGI10216J12902_1057351402	3300000956	Soil	VDQGEATHGSRETRLPVEAIEKTLDVLVVERQRLHNQDSGPEPLEANRLAIVYWQRELAEARRSTSA
A30PFW6_10426322	3300001361	Permafrost	VTRSEAMHGGRRQTRLPGEAIEKTLDILIIERQRLHEQHSGGEPLEANRRAIVYWQRELAEARRATRASA*
A10PFW1_106347722	3300001538	Permafrost	MHGGRRQTRLPGEAIEKTLDILIIERQRLHEQHSGGEPLEANRRAIVYWQRELAEARRATRASA*
JGI25390J43892_100013813	3300002911	Grasslands Soil	MYGSRQTRLPVEAIEKTLDVLIVERQRLHEQHSGPEPLEANRRAIVYWQRELAEARRPTSASA*
Ga0062592_1005632312	3300004480	Soil	LPVEAIEKTLDVLVVERQRLHEQRSGPEPLEANRRAIVYWQRELAEARRPTSASA*
Ga0066673_100380305	3300005175	Soil	CGRVRVGQREAIHRTRQTRLPIEAIQKTLDVLVVDRQRYTSSNQAPGRLKQIDAILYWQHELAEARRPTSASG*
Ga0066673_105927471	3300005175	Soil	VGQGKARHGIRQTRLPVEAIEKTLDVLIVERQRLHERHSGPEPLEANRLAIVYWQRELA
Ga0066679_104801171	3300005176	Soil	VREAPVGQGEVHGSRQTRLPVEAIEKTLDVLVVERQRLHEQHSGPDPLEANRLAIAYWQRELAEARRSTSASAYKLRHRV*
Ga0066684_107918181	3300005179	Soil	VGQREAIHRTRQTRLPIEAIEKTLDVLVADRQRLHEQQSGPGPLEANRRAILYWQHELAE
Ga0070708_10000405012	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	VAQWEATPSRRRQTRLPVGAIEKTLEILIIERQRLHEQQSNREPLETNRRAILYWQRELAQARRPSAMSS*
Ga0070708_1006854711	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	VSQGKAMHGSRQTRLPVEAIEKTLDVLVLERQRLHEQHSGPEPLEANRRAILYWQRELAQARLADQPVR*
Ga0070732_105467992	3300005542	Surface Soil	MAQGRAVNGDRRETRLPADAIQETVNVLVIERQQLRDSHASRELLEANRRAIVYWQHELALARHSALAGQNS*
Ga0070695_1000226485	3300005545	Corn, Switchgrass And Miscanthus Rhizosphere	MHGSRQTRLPVEAIEKTLDVLVLERQRLHEQHSGPEPLEANRRAILYWQRELAQARLADQPVR*
Ga0066701_104663191	3300005552	Soil	VAQSEAMHGGRRQTRLPVGAIEKTLDVLIVERQRLHEQHSGGEPLEANRRAIMYWQRELAEARRAGRTSA*
Ga0066692_108943551	3300005555	Soil	MHGSRQTRLPVEAIEKTLDVLIVERQRLHEQHSGSEPLEANRRAIVYWQRELAEARRPTSASA*
Ga0066700_108556141	3300005559	Soil	VEAIEKTLDVLVVERQRLHEQHSGPEPLEANRRAILYWQRELAEARRPTSMSA*
Ga0066694_104608711	3300005574	Soil	LPVEAIEKTLDVLIVERQRLHERHSGPEPLEANRLAIVYWQRELAEARRSTSASA*
Ga0066702_102356512	3300005575	Soil	LGQGEAMHRSRKTRLPVEAIEKTLDVLVVERQRLHEQHSGPDPLEANRLAIAYWQRELAEARRSTSASAYKLRHRV*
Ga0066654_103961772	3300005587	Soil	MHSSRETRLPVEAIEKTLDILVVERQRLREQHSAAEALEANRRAILYWQRELAEARRSTSASA*
Ga0066656_101053781	3300006034	Soil	QREAIDRTRQTRLPIEAIEKTLDVLVADRQRLHEQQSGPGPLEANRRAILYWQHELAEARRPTSASG*
Ga0066656_110595941	3300006034	Soil	VGQGEVHGSRQTRLPVEAIEKTLDVLVVERQRLHEQHSGPDPLEANRLAIAYWQRELAEARRSTSASAYKLRHRA*
Ga0066652_1012451771	3300006046	Soil	KTLDVLIAERQRLHEQHSGPGPLEANRLAIVYWQRELAEARRSTSASA*
Ga0070716_1000117272	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	VGQRDAMRGSRQTRLPVEAIEKTLDVLVVERQRLHEQHSGPEPLEANRRAISYWQRELAEARRPDQRVG*
Ga0079221_103813881	3300006804	Agricultural Soil	AEAPRGSEEARHGSRQTGLPVEAIEKTLDVLVVERQRLHEQRSGPEPLETNRRAIVHWQRELAEARRPTSASV*
Ga0075424_1028812801	3300006904	Populus Rhizosphere	VGQREARRGGRQTRLPVEAIEKTLDVLVVERQRLHEQRSGPEPLEANRRAISYWQRELAEARRPDQRVP*
Ga0066710_1016985421	3300009012	Grasslands Soil	VGQGEVHGSRQTRLPVEAIEKTLDVLVVERQRLHEQHSGPEPLEANRRAIVYWQRELAQARRSSSASA
Ga0066709_1000682356	3300009137	Grasslands Soil	MSWCGGLRVGQGEVRHGISRQRLPAGAIEKTLDVLIAERQRLHEQHSGPGPLEANRLAIVYWQRELAEARRSTSASA*
Ga0066709_1001196123	3300009137	Grasslands Soil	MHGGRRQTRLPVGAIEKTLDVLIVERQRLHEQHSGGEPLEANRRAIMYWQRELAEARRAGRTSA*
Ga0066709_1001652701	3300009137	Grasslands Soil	GSRQTRLPVEAIEKTLDVLIVERQRLHEQHSGPEPLEANRRAIVYWQRELAEARRPTSASA*
Ga0075423_110115491	3300009162	Populus Rhizosphere	DILVVERQRLHEQRSGPEPLETNRRAIVHWQRELAEARRPTSASV*
Ga0126309_107837201	3300010039	Serpentine Soil	MHGSRQTRLPVEAIEKTLDVLVVERQRLHNQDSGPEPLEANRVAIVYWQRELAEARRASRASA*
Ga0134082_104153932	3300010303	Grasslands Soil	MHGRKQTRLPVEIIEKTLDVLVVERQRLHEQHSGPEPLEANRPAILYRQRELAEARRPTSDSA*
Ga0134067_102284582	3300010321	Grasslands Soil	MHSSRETRLPVEAIEKTLDILVVERQRLREQHSAAEPLEANRRAILYWQRELAEAR
Ga0134086_103105781	3300010323	Grasslands Soil	IRQTRLPVEAIEKTLDVLIVERQRLHERHSGPEPLEANRLAIAYWQRELAEARRSTSASA
Ga0134064_101737171	3300010325	Grasslands Soil	VGQREAIHRTRQTRLPIEAIEKTLDVLVVDRQRLHEQQSGPGPLEANRRAILYWQHELAEARRPTSASG*
Ga0134111_102304801	3300010329	Grasslands Soil	MYGSRQTRLPVEAIEKTLDVLIVERQRLHEQHSGPEPLEANRRAIVYWQRELAEARRSTSASA*
Ga0138514_1000319881	3300011003	Soil	MRGSRQTRLPVEAIEKTLDILVVERQRLHEQRSGPEPLEANRRAISYWQRELAEARR
Ga0120157_10974792	3300011994	Permafrost	PCMAQWEATPIRQTRLPVEAIEKTLEALIIERQRLHERQSGREPLEANRRAILYWQRELALARSPTSTSA*
Ga0120152_10328211	3300012011	Permafrost	MAERKAVHGDRRQTRLPAEAIEKTLDVLIIERQRLRERHSGREPLEANRRAIAYWQHELAQARRATSTSA*
Ga0120139_10498332	3300012019	Permafrost	VAQSEAMHGGRRQTRLPVEAIEKTLDILIIERQRLHEQHSGGEPLEANRRAIMYWQRELAEARRATRASA*
Ga0137364_100190276	3300012198	Vadose Zone Soil	ARGSGEAMYGSRQTRLPVEAIEKTLDVLIVERQRLHEQHSGPEPLEANRRAIVYWQRELAEARRPASASA*
Ga0137364_101090573	3300012198	Vadose Zone Soil	VGQGKVRHGIRQTRLPAGAIEKTLDVLIAERQRLHEQHSGPGPLEANRLAIVYWQRELAEARRSTSASA*
Ga0137383_111666791	3300012199	Vadose Zone Soil	VAQSEAMHGGRRQTRLPVGAIEKTLDILIIDRQRLHEQHSGGEPLEANRRAIMYWQRELAEARRASKTSA*
Ga0137382_100164386	3300012200	Vadose Zone Soil	LDVLIVERQRLHEQHSGPEPLEANRRAIVYWQRELAEARRPTSASA*
Ga0137382_101640952	3300012200	Vadose Zone Soil	MHGGRRQTRLPVGAIEKTLDVLIVERQRLHEQHSGGEPLEANRRAIMYWQRELAEARRASKTSA*
Ga0137382_110683031	3300012200	Vadose Zone Soil	AMHGSRQTRLPVEAIQKTLDVLVVERQRLHEQDAGPDPLEANRLAIAYWQRELAEARRSTSASAYKLRQRV*
Ga0137382_111297801	3300012200	Vadose Zone Soil	VDQGVAMHRSRQTRLPVEAIERTLDVLVVERQRLHEQHSGPEPLEANRRAIVYWQRELAQARRSTSASA
Ga0137365_104450421	3300012201	Vadose Zone Soil	MHGSRQTRLPVEAIEKTLDVLIAERQRLHEQHSGPEPLEANRLAIVYWQRELAKARRSTSASA*
Ga0137374_101054001	3300012204	Vadose Zone Soil	MTEWKAEHGERRQTRLPVQAIEKTLDVLIIERQRLHERHSGREPLEANRRAIVYWQHELAQARQASSTSA*
Ga0137374_111251001	3300012204	Vadose Zone Soil	MHGGRRQTRLPIEAIEKTLDILIIERQRLHEQHSGGEPLEANRRAIMYWQRELAEARRATLASA*
Ga0137380_107743031	3300012206	Vadose Zone Soil	VGQGEAMHGSRQTHLPVEAIEKTLDVLVVERQRLHEQHSGPEPLEANRQALLYWQRELAEARRPTSASA*
Ga0137376_103820602	3300012208	Vadose Zone Soil	VDQGVAMHRSRQTRLPVEAIEKTLDVLVVERQRLHEQHSGPEPLEANRRAIVYWQRELAQARRSTSASA*
Ga0137378_104775751	3300012210	Vadose Zone Soil	HEFIRRSRVAQSEAMHGGRRQTRLPVGAIEKTLDILIIDRQRLHEQHSGGEPLEANRRAIMYWQRELAEARRASKTSA*
Ga0137377_103763911	3300012211	Vadose Zone Soil	VGQGKARHGIRQTRLPVEAIEKTLDVLIAERQRLHEQHSGPEPLEANRLAIVYWHQELAEARRSTSASA*
Ga0137370_104188861	3300012285	Vadose Zone Soil	ARGSGEAMYGSRQTRLPVEAIEKTLDVLIVERQRLHEQHSGPEPLEANRRAIVYWQRELAEARRPTSASA*
Ga0137372_100634452	3300012350	Vadose Zone Soil	VGQGEAMHRSRQTRLPVEAIEKTLDVLVVERQRLHEQHSGPEPLEANRRAIVYWQRELAEARRPTSASA*
Ga0137372_102856132	3300012350	Vadose Zone Soil	MHGSRQTRLPVEAIEKTLDVLVVERQRLHEQHSGAEPLEANRRAILYWQRELAEARRPTSASA*
Ga0137386_101978313	3300012351	Vadose Zone Soil	MYGSRQTRLPVEAIEKTLDVLIVERQRLHEQHSGPEPLEANRRAIVYWQRELAQARRSTSTSA*
Ga0137367_110072691	3300012353	Vadose Zone Soil	MTEWKAEHGERRQTRLPVQAIEKTLDVLIIERQRLHEQHSGGEPLEANRRAIMYWQRELAEARRVSRASA*
Ga0137367_111499821	3300012353	Vadose Zone Soil	VGQREAMHGSRQTRLPVEAIEKTLDVLVVERQRLHEQHSGPEPLEANRRAIVYWQRELAEARRPTSASA*
Ga0137366_101028373	3300012354	Vadose Zone Soil	RQTRLPVEAIEKTLDVLVVERQRLHEQHSGPEPLEANRRAIVYWQRELAQARRSTSASA*
Ga0137385_112616902	3300012359	Vadose Zone Soil	VAQSEAMHGGRRQTRLPVGAIEKTLDVLIIERQRLHEQHSGGEPLEANRRAIMYWQRELAEARRASKTSA*
Ga0137375_107770011	3300012360	Vadose Zone Soil	VAQWEPTPSGRRQTRLPVEAIEKTLEILIIERQRLHEQEANREPLEANRQAILYWQHELAQARRPSRMSA*
Ga0157286_102850291	3300012908	Soil	MYGSRETRLPVEAIEKTLDVLVVERQRLHEKHSGPEPLEANRLAIVYWQRELAEARRSTSASA*
Ga0157306_102024812	3300012912	Soil	MHGSRQTRLPVEAIEKTLDVLVVERQRLHEQHSGPEPLEANRLAIVYWQRELAEARRPDQRVR*
Ga0162651_1000243402	3300012938	Soil	MAHSEAMHGGRRQTRLPGEAIEKTLDSLIIERQRLHEQHSGRETLEANRRAIVYWQRELAEARRATRASA*
Ga0164300_104941821	3300012951	Soil	MHGSRQTRLPVEAIEKTLDVLVLERQRLHEQRSGPEPLEANRRAILYWQRELAQARLADQPVR*
Ga0164299_100827303	3300012958	Soil	VSQGKAMHGSRQTRLPVEAIEKTLDVLVLERQRLHEQRSGPEPLEANRRAILYLQRELAQARLADQPVR*
Ga0164301_100609241	3300012960	Soil	MHGSRQTRLPVEAIEKTLDVLVVERQRLHEQHSGPEPLEANRRAILYWQRELAQARLADQPVR*
Ga0164302_101784382	3300012961	Soil	VSQGKAMHGSRQTRLPVEAIEKTLDVLVVERQRLHDQHSGPEPLEANRRAILYWQRELAEARRPTSASA*
Ga0120154_10934071	3300013501	Permafrost	MAQWEATRRRQTRLPVEAIEKTLEALIIERQRLHERQSGREPLEANRRAILYWQRELAQARWPTSTSA*
Ga0120179_10977971	3300013763	Permafrost	MAERKAVHGDRRQTRLPAEAIQKTLDVLIIERQRLRERHSGREPLEANRRAIAYWQHELAQARRATSTSA*
Ga0120111_10228362	3300013764	Permafrost	MQHEFIRRSRVAQSEAMHGGRRQTRLPVEAIEKTLDILIIERQRLHEQHSGGEPLEANRRAIMYWQRELAEARRATRASA*
Ga0120172_10432673	3300013765	Permafrost	MAERKAVHGDRRQTRLPAEAIEKTLDVLIIERQRLRDRHSGREPLEANRRAIAYWQHELAQARRATSTSA*
Ga0120155_10864503	3300013768	Permafrost	PEARMAQWEATPIRQTRLPVEAIEKTLEALIIERQRLHERQSGREPLEANRRAILYWQRELAQARWPTSTSA*
Ga0157377_113397081	3300014745	Miscanthus Rhizosphere	ATHGSRETRLPVEAIEKTLDVQVVERQRLHEQHSGPEPLEANRRAILYWQRELAQARLADQPVR*
Ga0120171_10210664	3300014827	Permafrost	MAERKAVHGDRRQTRLPAEAIQKTLDVLIIERQRLRDRHSGREPLEANRRAIAYWQHELAQARRATSTSA*
Ga0134069_11603381	3300017654	Grasslands Soil	MYGSRQTRLPVEAIEKTLDVLIVERQRLHEQHSGPEPLEANRRAIVYWQRELAQARRSTSASA
Ga0184605_100207392	3300018027	Groundwater Sediment	VGKGKAMHGRRQTRLPVEAIEKTLDVLVVERQRLHEQHSGPEPLEANRRAIVYWQRELAEARRPTSASA
Ga0184608_100542642	3300018028	Groundwater Sediment	VGQGRVIHGSRQTRLPVEAIEKTLDALVVERQRLHEQQSGPEPLEANRRAILYWQRELAEARRPTSASA
Ga0184608_103402861	3300018028	Groundwater Sediment	PVEAIEKTLDVLVVERQRLHEQHSGPEPLEANRRALVYWQRELAEARRPTSASA
Ga0184619_103048201	3300018061	Groundwater Sediment	EAIEKTLDSFVIERQRLHEQHSGREPLEANRRAIVYWQRELAEARRASA
Ga0184619_104151572	3300018061	Groundwater Sediment	THLPVEAIEKTLDVLVVERQRLHEQHSGPEPLEANRLAIVYWQRELAEARRSTSASA
Ga0066655_102060691	3300018431	Grasslands Soil	MQRSRQTRLPVEAIEKTLDVLVVERQRLHKQHSGPEPLEANRRAILYWQRELVQARRST
Ga0066667_100547704	3300018433	Grasslands Soil	MHGGRRQTRLPVGAIEKTLDVLIVERQRLHEQHSGGEPLEANRRAIMYWQRELAEARRAGRTSA
Ga0066667_101169831	3300018433	Grasslands Soil	VGQGKVRHGIRQTRLPAGAIEKTLDVLIAERQRLHEQHSGPGPLEANRLAIVYWQRELAEARR
Ga0066667_102532882	3300018433	Grasslands Soil	EKTLDILVVERQRLREQHSAAEALEANRRAILYWQRELAEARRSTSASA
Ga0066669_100346333	3300018482	Grasslands Soil	VGQGKVRHGIRQTRLPAGAIEKTLDVLIAERQRLHEQHSGPGPLEANRLAIVYWQRELAEARRSTSASA
Ga0173482_105571361	3300019361	Soil	MRGSRQTRLPVEAIEKTLDVLVVERQRLHEQHSGPEPLEANRRAISYWQRELAEARRPDQ
Ga0193704_10846261	3300019867	Soil	VGQGEAMHGSRQTRLPVEAIEKTLDVLVVERQRLHEQHSGPEPLEANRRAILYWQRELAEARRPTSASA
Ga0193705_10453831	3300019869	Soil	VGQGEAMHGSRQTRLPVEAIEKTLDVLVVERQRLHDQHSGPEPLEANRRAILYWQRELAEARRPTSASA
Ga0179594_101962761	3300020170	Vadose Zone Soil	MYGSRQTRLPVEAIEKTLDVLIVERQRLHEQHSGPEPLEANRRAIVYWQRELAEARRPTSASA
Ga0210382_100715911	3300021080	Groundwater Sediment	MGQGEAMHGSRQTRLPVEAIEKTLDVLVVERQRLHEQHSGPEPLEANRRAILYWQHELVEARRPASASG
Ga0210382_104662082	3300021080	Groundwater Sediment	RVGQGKAMHGSRQTSLPVEAIEKTLDVLVVERQRLHEQHSGPEPLEANRLAIVYWQRELAEARRSTSASA
Ga0193695_10198682	3300021418	Soil	VRRPRVGQGEAMHGSRQTRLPVEAIEKTLDVLVVERQRLHEQHSGPGPLEANRRAIVYWQRELAEARRPTSASA
Ga0207692_101121791	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	VGQRDAMRGGRQTRLPVEAIEKTLDILVVERQRLHEQRSGPEPLEANRRAISYWQRELAEARRPDQRVG
Ga0207693_100206166	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	MHGSRQTRLPVEAIEKTLDVLVLERQRLHEQHSGPEPLEANRRAILYWQRELAQARLADQPVR
Ga0207665_100038466	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	MRGSRQTRLPVEAIEKTLDVLVVERQRLHEQHSGPEPLEANRRAISYWQRELAEARRPDQRVG
Ga0209234_13051811	3300026295	Grasslands Soil	MHSSRETRLPVEAIEKTLDILVVERQRLREQHSAAEPLEANRRAILYWQRELAEARRSTSASA
Ga0209238_11534821	3300026301	Grasslands Soil	GSRQTRLPVEAIEKTLDVLIVERQRLHEQHSGPEPLEANRRAIVYWQRELAEARRPTSAS
Ga0209238_12719102	3300026301	Grasslands Soil	MHGRKQTRLPVEVIEKTLDVLIVERQRLHEQHSGPEPLEANRRAIVYWQRELAE
Ga0209156_103594671	3300026547	Soil	VGQGKVRHGIRQTRLPAGAIEKTLDVLIAERQRLHEQHSGPGPLEANRLAIVYWQREL
Ga0209178_11974022	3300027725	Agricultural Soil	LPVEAIEKTLDVLVVERQRLHEQRSGPEPLETNRRAIVHWQRELAEARRPTSASV
Ga0137415_104299662	3300028536	Vadose Zone Soil	VAQSEAMHGGRRQTRLPVGAIEKTLDVLIVERQRLHEQHSGGEPLEANRRAIMYWQRELAEARRASRTSA
Ga0307303_100167591	3300028713	Soil	RRQTRLPVEAIEKTLDVLVVERQRLHEQHSGPEPLEANRRAILYWQRELAEARRPTSASA
Ga0307309_100915602	3300028714	Soil	VAHSEAMHGGRRQTRLPGEAIEKTLDSLIIERQRLHEQHSGPEPLEANRRAILYWQRELAEARRPTSASA
Ga0307313_100981172	3300028715	Soil	VGQGRVIHGSRQTRLPVEAIEKTLDALVVERQRLHEQQSGPEPLEANRRAILYWQREL
Ga0307301_101394241	3300028719	Soil	HGRRQTRLPVEAIEKTLDVLVVERQRLHEQHSGPEPLEANRRAILYWQRELAEARRPTSASA
Ga0307316_100559432	3300028755	Soil	VAHSEAMHGGRRQTRLPGEAIEKTLDSLIIERQRLHEQHSGREPLEANRRAIVYWQRELAEARRATRASA
Ga0307305_102646652	3300028807	Soil	VGQGEAIHGSRQTRLPVEAIEKTLDVLVVERQRLHEQHSGREPLEANRLAIAYWQRELAEARRSTSASA
Ga0307292_104284142	3300028811	Soil	VGQGETMRGARQTRLPIEAIEKTLDVLVVERQRLHEQQSGPGPLEANRRAILYWQHELVEARRPA
Ga0307296_106323362	3300028819	Soil	VAHSEAMHGGRRQTRLPGEAIEKTLDSLVIERQRLHEQHSGREPLEANRRAIVYWQRELAEARRATRASA
Ga0307310_102125752	3300028824	Soil	VAHSEAMHGGRRQTRLPGEAIEKTLDSLVIERQRLHEQHSGREPLEANRRAIVYWQRELGEARRATRASA
Ga0307312_100230524	3300028828	Soil	VGQGKAMHGSRQTSLPVEAIEKTLDVLVVERQRLHEQHSGPEPLEANRLAIVYWQRELAEARRSTSASA
Ga0307312_101194541	3300028828	Soil	VGQGEAMHGSRQTRLPVEAIEKTLDVLVVERQRLHEQRSGPEPLEANRRAILYWQRELA
Ga0307312_105125071	3300028828	Soil	VAHSEAMHGGRRQTRLPGEAIEKTLDSLIIERQRLHEQHSGREPLEANRRAIVYWQRELGEARRATRASA
Ga0307312_109059601	3300028828	Soil	VAHSEAMHSGRRQTRLPGEAIEKTLDSLIIERQRLHEQHSGREPLEANRRAIVYWQRELAEARRATR
Ga0307286_101814831	3300028876	Soil	VGQGEAMHGSRQTRLPVEAIEKTLDVLVVERQRLHEQRSGPEPLEANRRAILYWQRELAEARRPT
Ga0307300_102368571	3300028880	Soil	MAHSEAMHGGRRQTRLPGEAIEKTLDSLIIERQRLHEQHSGREPLELNRRAIVYWQRELAEARRATRASA
Ga0307308_100825211	3300028884	Soil	SRQTSLPVEAIEKTLDVLVVERQRLHEQHSGPEPLEANRLAIVYWQRELAEARRSTSASA
Ga0307304_100504052	3300028885	Soil	RRQTRLPVEAIEKTLDVLVVERQRLHEQHSGPEPLEANRRAIVYWQRELAEARRPTSASA
Ga0308194_102884701	3300031421	Soil	LVRRLRVGKGKAMHGRRQTRLPVEAIEKTLDVLVVERQRLHEQHSGPEPLEANRRAIVYWQRELAEARRPTSASA
Ga0307468_1008303891	3300031740	Hardwood Forest Soil	VSQGKAMHGSRQTRLPVEAIEKTLDVLVLERQRLHEQHSGPEPLEANRRAILYWQRELAQARL
Ga0307471_1029011422	3300032180	Hardwood Forest Soil	TRLPVEAIEKTLDVLVLERQRLHEQRSGPEPLEANRRAISYWQRELAEARRPTRASA
Ga0310810_114243291	3300033412	Soil	VRKLGVDQGEAMDQGEAMHGGRQTRLPVEAIEKTLDILVVWRQRLHEQHSGPEPLEVNRRAISYWQRELAEARRPDQRVP
Ga0310811_102409902	3300033475	Soil	VSQGKAMHGSRQTRLPVEAIEKTLDVLVLERQRLHEQRSGPEPLEANRRAILYWQRELAQARLADQPVR

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.64
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.64
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F062287

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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