Metagenome / Metatranscriptome Family F062137

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F062137
Family Type	Metagenome / Metatranscriptome
Number of Sequences	131
Average Sequence Length	87 residues
Representative Sequence	KKEGLISDYKVWTNVTTDSPGDWDVAVGLMVANYAAIDQLDAKAATSVAKHYGSRDAMIEAGKKRNDLREVVASKLAREVMPK
Number of Associated Samples	108
Number of Associated Scaffolds	131

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	3.05 %
% of genes near scaffold ends (potentially truncated)	94.66 %
% of genes from short scaffolds (< 2000 bps)	92.37 %
Associated GOLD sequencing projects	104
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.42

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (59.542 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (24.427 % of family members)
Environment Ontology (ENVO)	Unclassified (31.298 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (58.015 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 34.23% β-sheet: 18.02% Coil/Unstructured: 47.75%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.42
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.42
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 131 Family Scaffolds
PF01592	NifU_N	3.82
PF13185	GAF_2	2.29
PF00793	DAHP_synth_1	1.53
PF02371	Transposase_20	1.53
PF01740	STAS	1.53
PF00069	Pkinase	1.53
PF13519	VWA_2	0.76
PF14697	Fer4_21	0.76
PF04055	Radical_SAM	0.76
PF04343	DUF488	0.76
PF13103	TonB_2	0.76
PF00155	Aminotran_1_2	0.76
PF01042	Ribonuc_L-PSP	0.76
PF11412	DsbC	0.76
PF00365	PFK	0.76
PF13646	HEAT_2	0.76
PF07609	DUF1572	0.76
PF07681	DoxX	0.76
PF00892	EamA	0.76
PF01966	HD	0.76
PF13430	DUF4112	0.76
PF13620	CarboxypepD_reg	0.76
PF05697	Trigger_N	0.76
PF08818	DUF1801	0.76
PF07676	PD40	0.76
PF14534	DUF4440	0.76
PF09723	Zn-ribbon_8	0.76
PF10282	Lactonase	0.76
PF13441	Gly-zipper_YMGG	0.76
PF07883	Cupin_2	0.76
PF09969	DUF2203	0.76
PF07311	Dodecin	0.76
PF12867	DinB_2	0.76

COG ID	Name	Functional Category	% Frequency in 131 Family Scaffolds
COG0515	Serine/threonine protein kinase	Signal transduction mechanisms [T]	6.11
COG0822	Fe-S cluster assembly scaffold protein IscU, NifU family	Posttranslational modification, protein turnover, chaperones [O]	3.82
COG3547	Transposase	Mobilome: prophages, transposons [X]	1.53
COG2259	Uncharacterized membrane protein YphA, DoxX/SURF4 family	Function unknown [S]	0.76
COG3189	Uncharacterized conserved protein YeaO, DUF488 family	Function unknown [S]	0.76
COG3360	Flavin-binding protein dodecin	General function prediction only [R]	0.76
COG4270	Uncharacterized membrane protein	Function unknown [S]	0.76
COG4430	Uncharacterized conserved protein YdeI, YjbR/CyaY-like superfamily, DUF1801 family	Function unknown [S]	0.76
COG5646	Iron-binding protein Fra/YdhG, frataxin family (Fe-S cluster biosynthesis)	Posttranslational modification, protein turnover, chaperones [O]	0.76
COG5649	Uncharacterized conserved protein, DUF1801 domain	Function unknown [S]	0.76
COG0205	6-phosphofructokinase	Carbohydrate transport and metabolism [G]	0.76
COG0251	Enamine deaminase RidA/Endoribonuclease Rid7C, YjgF/YER057c/UK114 family	Defense mechanisms [V]	0.76
COG0544	FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)	Posttranslational modification, protein turnover, chaperones [O]	0.76

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	59.54 %
Unclassified	root	N/A	40.46 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	59.54 %
Unclassified	root	N/A	40.46 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	59.54 %
Unclassified	root	N/A	40.46 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	42.75 %
Unclassified	root	N/A	40.46 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	2.29 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	1.53 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	0.76 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	40.46 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	12.21 %
Blastocatellia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia	8.40 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	7.63 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1.53 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.76 %
Bacteroidetes/Chlorobi group	clade	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group	0.76 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	0.76 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.76 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	40.46 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	12.21 %
Blastocatellales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales	8.40 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	5.34 %
Ignavibacteriae	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Ignavibacteriae	0.76 %
unclassified Verrucomicrobia	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia	0.76 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.76 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.76 %
Bryobacterales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	0.76 %
Sphingomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales	0.76 %
Alteromonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Alteromonadales	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	40.46 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	12.21 %
Pyrinomonadaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae	8.40 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	5.34 %
Ignavibacteria	class	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Ignavibacteriae → Ignavibacteria	0.76 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.76 %
Solibacteraceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae	0.76 %
Sphingomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae	0.76 %
Colwelliaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Alteromonadales → Colwelliaceae	0.76 %
Desulfobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales	0.76 %
Streptomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	40.46 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	12.21 %
unclassified Pyrinomonadaceae	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae	8.40 %
Granulicella	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella	0.76 %
Candidatus Sulfopaludibacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter	0.76 %
unclassified Ignavibacteria	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Ignavibacteriae → Ignavibacteria → unclassified Ignavibacteria	0.76 %
Candidatus Koribacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	0.76 %
Streptomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	0.76 %
Colwellia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Alteromonadales → Colwelliaceae → Colwellia	0.76 %
Sphingomonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas	0.76 %
Desulfobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae	0.76 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	40.46 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	12.21 %
Pyrinomonadaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	8.40 %
Candidatus Koribacter versatilis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	0.76 %
Sphingomonas daechungensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → Sphingomonas daechungensis	0.76 %
unclassified Candidatus Sulfopaludibacter	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter	0.76 %
Ignavibacteria bacterium 13_1_40CM_2_61_4	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Ignavibacteriae → Ignavibacteria → unclassified Ignavibacteria → Ignavibacteria bacterium 13_1_40CM_2_61_4	0.76 %
Colwellia psychrerythraea	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Alteromonadales → Colwelliaceae → Colwellia → Colwellia psychrerythraea	0.76 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	0.76 %
unclassified Desulfobacteraceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae → unclassified Desulfobacteraceae	0.76 %
Granulicella	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella	0.76 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	40.46 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	12.21 %
Pyrinomonadaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	8.40 %
Desulfobacteraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae → unclassified Desulfobacteraceae → Desulfobacteraceae bacterium	0.76 %
Candidatus Sulfopaludibacter sp. SbA3	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA3	0.76 %
Candidatus Koribacter versatilis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	0.76 %
Sphingomonas daechungensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → Sphingomonas daechungensis	0.76 %
Ignavibacteria bacterium 13_1_40CM_2_61_4	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Ignavibacteriae → Ignavibacteria → unclassified Ignavibacteria → Ignavibacteria bacterium 13_1_40CM_2_61_4	0.76 %
Colwellia psychrerythraea	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Alteromonadales → Colwelliaceae → Colwellia → Colwellia psychrerythraea	0.76 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	0.76 %
Granulicella	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella	0.76 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.76 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000955\|JGI1027J12803_101270277	All Organisms → cellular organisms → Bacteria	757	Open in IMG/M
3300003219\|JGI26341J46601_10059362	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae → unclassified Desulfobacteraceae → Desulfobacteraceae bacterium	1177	Open in IMG/M
3300003367\|JGI26338J50219_1004728	All Organisms → cellular organisms → Bacteria	1052	Open in IMG/M
3300004080\|Ga0062385_11292955	Not Available	502	Open in IMG/M
3300004091\|Ga0062387_100460265	All Organisms → cellular organisms → Bacteria	876	Open in IMG/M
3300004091\|Ga0062387_100904225	Not Available	668	Open in IMG/M
3300004092\|Ga0062389_104491708	Not Available	525	Open in IMG/M
3300004635\|Ga0062388_100836785	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	877	Open in IMG/M
3300004635\|Ga0062388_102168432	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	578	Open in IMG/M
3300005332\|Ga0066388_103429711	Not Available	809	Open in IMG/M
3300005332\|Ga0066388_104056858	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Alteromonadales → Colwelliaceae → Colwellia → Colwellia psychrerythraea	747	Open in IMG/M
3300005355\|Ga0070671_101554692	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	586	Open in IMG/M
3300005437\|Ga0070710_11282199	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	544	Open in IMG/M
3300005764\|Ga0066903_105803062	Not Available	648	Open in IMG/M
3300005764\|Ga0066903_107742520	Not Available	553	Open in IMG/M
3300005993\|Ga0080027_10019464	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2414	Open in IMG/M
3300006050\|Ga0075028_100042566	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	2148	Open in IMG/M
3300006086\|Ga0075019_10070958	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1976	Open in IMG/M
3300006102\|Ga0075015_100993261	Not Available	513	Open in IMG/M
3300006162\|Ga0075030_100539228	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	927	Open in IMG/M
3300006172\|Ga0075018_10090546	All Organisms → cellular organisms → Bacteria	1342	Open in IMG/M
3300006173\|Ga0070716_100775097	All Organisms → cellular organisms → Bacteria	740	Open in IMG/M
3300006176\|Ga0070765_101916620	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	555	Open in IMG/M
3300006800\|Ga0066660_11414080	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	545	Open in IMG/M
3300009525\|Ga0116220_10249359	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	775	Open in IMG/M
3300009525\|Ga0116220_10617150	Not Available	500	Open in IMG/M
3300009552\|Ga0116138_1117197	All Organisms → cellular organisms → Bacteria → Acidobacteria	737	Open in IMG/M
3300009665\|Ga0116135_1096946	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1065	Open in IMG/M
3300010043\|Ga0126380_12183788	Not Available	511	Open in IMG/M
3300010046\|Ga0126384_11654242	Not Available	604	Open in IMG/M
3300010339\|Ga0074046_10277418	All Organisms → cellular organisms → Bacteria → Acidobacteria	1034	Open in IMG/M
3300010339\|Ga0074046_10839327	Not Available	536	Open in IMG/M
3300010361\|Ga0126378_10091641	Not Available	2974	Open in IMG/M
3300010398\|Ga0126383_11867475	Not Available	689	Open in IMG/M
3300011120\|Ga0150983_10774971	All Organisms → cellular organisms → Bacteria	693	Open in IMG/M
3300011120\|Ga0150983_16714175	Not Available	655	Open in IMG/M
3300012918\|Ga0137396_11027955	Not Available	595	Open in IMG/M
3300012948\|Ga0126375_11767480	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	538	Open in IMG/M
3300012951\|Ga0164300_10985936	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	541	Open in IMG/M
3300012989\|Ga0164305_11941300	Not Available	535	Open in IMG/M
3300014162\|Ga0181538_10033307	Not Available	3381	Open in IMG/M
3300014200\|Ga0181526_10640876	All Organisms → cellular organisms → Bacteria → Acidobacteria	671	Open in IMG/M
3300014501\|Ga0182024_11908119	All Organisms → cellular organisms → Bacteria → Acidobacteria	660	Open in IMG/M
3300015089\|Ga0167643_1064893	Not Available	539	Open in IMG/M
3300015372\|Ga0132256_103038674	All Organisms → cellular organisms → Bacteria	564	Open in IMG/M
3300016319\|Ga0182033_10701173	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → Sphingomonas daechungensis	886	Open in IMG/M
3300016357\|Ga0182032_11126094	Not Available	674	Open in IMG/M
3300016357\|Ga0182032_12054539	Not Available	502	Open in IMG/M
3300016445\|Ga0182038_11867252	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	543	Open in IMG/M
3300017940\|Ga0187853_10281213	Not Available	756	Open in IMG/M
3300017940\|Ga0187853_10435074	All Organisms → cellular organisms → Bacteria	577	Open in IMG/M
3300017943\|Ga0187819_10158537	All Organisms → cellular organisms → Bacteria	1346	Open in IMG/M
3300017943\|Ga0187819_10759541	Not Available	545	Open in IMG/M
3300017955\|Ga0187817_10927923	Not Available	557	Open in IMG/M
3300017996\|Ga0187891_1299428	Not Available	525	Open in IMG/M
3300018006\|Ga0187804_10321596	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	676	Open in IMG/M
3300018034\|Ga0187863_10271082	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	943	Open in IMG/M
3300018037\|Ga0187883_10351211	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	754	Open in IMG/M
3300018042\|Ga0187871_10543283	All Organisms → cellular organisms → Bacteria → Acidobacteria	644	Open in IMG/M
3300018043\|Ga0187887_10595889	Not Available	652	Open in IMG/M
3300018043\|Ga0187887_10829311	All Organisms → cellular organisms → Bacteria → Acidobacteria	547	Open in IMG/M
3300018062\|Ga0187784_10190784	Not Available	1673	Open in IMG/M
3300018062\|Ga0187784_10993696	Not Available	667	Open in IMG/M
3300018088\|Ga0187771_10915538	All Organisms → cellular organisms → Bacteria → Acidobacteria	744	Open in IMG/M
3300018088\|Ga0187771_11291576	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	619	Open in IMG/M
3300020579\|Ga0210407_10658592	All Organisms → cellular organisms → Bacteria → Acidobacteria	814	Open in IMG/M
3300020579\|Ga0210407_11066110	Not Available	614	Open in IMG/M
3300020580\|Ga0210403_10615550	Not Available	876	Open in IMG/M
3300020581\|Ga0210399_11121241	Not Available	628	Open in IMG/M
3300020583\|Ga0210401_10637166	All Organisms → cellular organisms → Bacteria → Acidobacteria	927	Open in IMG/M
3300021088\|Ga0210404_10390799	All Organisms → cellular organisms → Bacteria	777	Open in IMG/M
3300021168\|Ga0210406_10951614	Not Available	642	Open in IMG/M
3300021170\|Ga0210400_10580864	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	924	Open in IMG/M
3300021178\|Ga0210408_10017676	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	5738	Open in IMG/M
3300021178\|Ga0210408_11473052	Not Available	511	Open in IMG/M
3300021180\|Ga0210396_11122813	All Organisms → cellular organisms → Bacteria → Acidobacteria	661	Open in IMG/M
3300021405\|Ga0210387_11088234	Not Available	697	Open in IMG/M
3300021405\|Ga0210387_11120792	Not Available	686	Open in IMG/M
3300021406\|Ga0210386_11192665	All Organisms → cellular organisms → Bacteria → Acidobacteria	644	Open in IMG/M
3300021420\|Ga0210394_11114711	All Organisms → cellular organisms → Bacteria → Acidobacteria	680	Open in IMG/M
3300021433\|Ga0210391_10379361	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	1109	Open in IMG/M
3300021478\|Ga0210402_10335548	All Organisms → cellular organisms → Bacteria → Acidobacteria	1402	Open in IMG/M
3300021478\|Ga0210402_11818417	Not Available	535	Open in IMG/M
3300021479\|Ga0210410_10695320	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	898	Open in IMG/M
3300021479\|Ga0210410_10921158	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	761	Open in IMG/M
3300021560\|Ga0126371_10593414	All Organisms → cellular organisms → Bacteria → Acidobacteria	1257	Open in IMG/M
3300022724\|Ga0242665_10172525	All Organisms → cellular organisms → Bacteria	697	Open in IMG/M
3300022724\|Ga0242665_10327938	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	542	Open in IMG/M
3300022726\|Ga0242654_10354979	Not Available	552	Open in IMG/M
3300023259\|Ga0224551_1082267	Not Available	566	Open in IMG/M
3300025903\|Ga0207680_10684895	All Organisms → cellular organisms → Bacteria	734	Open in IMG/M
3300025928\|Ga0207700_10703232	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	902	Open in IMG/M
3300025934\|Ga0207686_11154759	Not Available	633	Open in IMG/M
3300026281\|Ga0209863_10015335	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2388	Open in IMG/M
3300026507\|Ga0257165_1085892	Not Available	580	Open in IMG/M
3300026557\|Ga0179587_10563284	All Organisms → cellular organisms → Bacteria	749	Open in IMG/M
3300027537\|Ga0209419_1047045	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	835	Open in IMG/M
3300027576\|Ga0209003_1012416	All Organisms → cellular organisms → Bacteria → Acidobacteria	1299	Open in IMG/M
3300027854\|Ga0209517_10552154	Not Available	618	Open in IMG/M
3300028731\|Ga0302301_1095759	Not Available	764	Open in IMG/M
3300028747\|Ga0302219_10012174	All Organisms → cellular organisms → Bacteria → Acidobacteria	3224	Open in IMG/M
3300029943\|Ga0311340_10070730	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	3993	Open in IMG/M
3300030042\|Ga0302300_1059656	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1214	Open in IMG/M
3300030042\|Ga0302300_1077841	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA3	1022	Open in IMG/M
3300030043\|Ga0302306_10151891	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	893	Open in IMG/M
3300030399\|Ga0311353_10474038	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1114	Open in IMG/M
3300030509\|Ga0302183_10000113	All Organisms → cellular organisms → Bacteria → Acidobacteria	37413	Open in IMG/M
3300030743\|Ga0265461_11478096	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	732	Open in IMG/M
3300030854\|Ga0075385_11875455	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Ignavibacteriae → Ignavibacteria → unclassified Ignavibacteria → Ignavibacteria bacterium 13_1_40CM_2_61_4	705	Open in IMG/M
3300031233\|Ga0302307_10083897	Not Available	1674	Open in IMG/M
3300031708\|Ga0310686_103601935	Not Available	1477	Open in IMG/M
3300031718\|Ga0307474_10675365	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	815	Open in IMG/M
3300031719\|Ga0306917_11209750	Not Available	586	Open in IMG/M
3300031744\|Ga0306918_10244396	Not Available	1368	Open in IMG/M
3300031754\|Ga0307475_10166202	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella	1757	Open in IMG/M
3300031771\|Ga0318546_11145989	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	546	Open in IMG/M
3300031823\|Ga0307478_10025870	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	4190	Open in IMG/M
3300031823\|Ga0307478_10490909	Not Available	1023	Open in IMG/M
3300031823\|Ga0307478_10584940	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	933	Open in IMG/M
3300031833\|Ga0310917_10775478	Not Available	648	Open in IMG/M
3300031897\|Ga0318520_11066179	Not Available	512	Open in IMG/M
3300031945\|Ga0310913_11037185	All Organisms → cellular organisms → Bacteria	574	Open in IMG/M
3300031954\|Ga0306926_12940201	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	511	Open in IMG/M
3300032051\|Ga0318532_10306243	Not Available	564	Open in IMG/M
3300032054\|Ga0318570_10039099	All Organisms → cellular organisms → Bacteria	1924	Open in IMG/M
3300032180\|Ga0307471_101628571	Not Available	801	Open in IMG/M
3300032180\|Ga0307471_101636132	All Organisms → cellular organisms → Bacteria → Acidobacteria	799	Open in IMG/M
3300032205\|Ga0307472_101629063	Not Available	635	Open in IMG/M
3300032515\|Ga0348332_12715619	Not Available	510	Open in IMG/M
3300033829\|Ga0334854_062598	Not Available	887	Open in IMG/M
3300034282\|Ga0370492_0190569	All Organisms → cellular organisms → Bacteria → Acidobacteria	837	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	96.95%
Host-Associated	Host-Associated	3.05%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	74.81%
Aquatic	Environmental → Aquatic	22.14%
Plants	Host-Associated → Plants	3.05%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	65.65%
Freshwater	Environmental → Aquatic → Freshwater	18.32%
Peat	Environmental → Terrestrial → Peat	8.40%
Sediment	Environmental → Aquatic → Sediment	3.82%
Rhizosphere	Host-Associated → Plants → Rhizosphere	3.05%
Plant Litter	Environmental → Terrestrial → Plant Litter	0.76%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	48.85%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	18.32%
Loam	Environmental → Terrestrial → Soil → Loam	9.16%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	8.40%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	7.63%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	3.82%
Soil	Host-Associated → Plants → Rhizosphere → Soil	2.29%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified	0.76%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	0.76%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	35.88%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	13.74%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	11.45%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	8.40%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	6.87%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	5.34%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	3.82%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	3.05%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	2.29%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	2.29%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	2.29%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	1.53%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	1.53%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified	0.76%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	0.76%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	24.43%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	6.87%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	6.11%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	6.11%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	6.11%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	5.34%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	4.58%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	3.82%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	3.05%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	3.05%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	3.05%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	3.05%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.29%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	2.29%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.29%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	1.53%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	1.53%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	1.53%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	1.53%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	1.53%
Prmafrost Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Prmafrost Soil	1.53%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	1.53%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	1.53%
Glacier Forefield Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil	0.76%
Untreated Peat Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil	0.76%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost	0.76%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	0.76%
Plant Litter	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter	0.76%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.76%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.76%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000955	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300003219	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM3	Environmental	Open in IMG/M
3300003367	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP03_OM3	Environmental	Open in IMG/M
3300004080	Coassembly of ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300004091	Coassembly of ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004635	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005355	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG	Host-Associated	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005993	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 1 DNA2013-046	Environmental	Open in IMG/M
3300006050	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2014	Environmental	Open in IMG/M
3300006086	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2013	Environmental	Open in IMG/M
3300006102	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2013	Environmental	Open in IMG/M
3300006162	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012	Environmental	Open in IMG/M
3300006172	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2014	Environmental	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300006800	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109	Environmental	Open in IMG/M
3300009525	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_7_NC metaG	Environmental	Open in IMG/M
3300009552	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_20_150	Environmental	Open in IMG/M
3300009665	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_20_10	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010339	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM3	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300012918	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012951	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MG	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300014162	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin23_30_metaG	Environmental	Open in IMG/M
3300014200	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin06_30_metaG	Environmental	Open in IMG/M
3300014501	Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300015089	Arctic soil microbial communities from a glacier forefield, Russell Glacier, Kangerlussuaq, Greenland (Sample G8A, Adjacent to main proglacial river, end of transect (Watson river))	Environmental	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300017940	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_6_100	Environmental	Open in IMG/M
3300017943	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_4	Environmental	Open in IMG/M
3300017955	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_2	Environmental	Open in IMG/M
3300017996	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_21_40	Environmental	Open in IMG/M
3300018006	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_4	Environmental	Open in IMG/M
3300018034	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_11_10	Environmental	Open in IMG/M
3300018037	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_10	Environmental	Open in IMG/M
3300018042	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_10	Environmental	Open in IMG/M
3300018043	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_7_10	Environmental	Open in IMG/M
3300018062	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018088	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_10_MG	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021088	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-M	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental	Open in IMG/M
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental	Open in IMG/M
3300021406	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021433	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-O	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300022724	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-17-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022726	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-30-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300023259	Peat soil microbial communities from Stordalen Mire, Sweden - 717 P3 20-24	Environmental	Open in IMG/M
3300025903	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025934	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026281	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 1 DNA2013-046 (SPAdes)	Environmental	Open in IMG/M
3300026507	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - CO-12-B	Environmental	Open in IMG/M
3300026557	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal	Environmental	Open in IMG/M
3300027537	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM1H0_M3 (SPAdes)	Environmental	Open in IMG/M
3300027576	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM3H0_M3 (SPAdes)	Environmental	Open in IMG/M
3300027854	Peat soil microbial communities from Weissenstadt, Germany - SII-2010 (SPAdes)	Environmental	Open in IMG/M
3300028731	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_E1_2	Environmental	Open in IMG/M
3300028747	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E1_2	Environmental	Open in IMG/M
3300029943	I_Palsa_N3 coassembly	Environmental	Open in IMG/M
3300030042	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_E1_1	Environmental	Open in IMG/M
3300030043	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_E3_1	Environmental	Open in IMG/M
3300030399	II_Palsa_E2 coassembly	Environmental	Open in IMG/M
3300030509	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_N3_2	Environmental	Open in IMG/M
3300030743	Forest Soil Metatranscriptomes Boreal Montmorency Forest, Quebec, Canada VCO Co-assembly	Environmental	Open in IMG/M
3300030854	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - OB2 SO (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031233	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_E3_2	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031718	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031823	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031897	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300032051	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f26	Environmental	Open in IMG/M
3300032054	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f23	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300032515	FICUS49499 Metatranscriptome Czech Republic combined assembly (additional data)	Environmental	Open in IMG/M
3300033829	Peat soil microbial communities from Stordalen Mire, Sweden - 715 P2 1-5	Environmental	Open in IMG/M
3300034282	Peat soil microbial communities from wetlands in Alaska, United States - Eight_mile_03D_16	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI1027J12803_1012702771	3300000955	Soil	DRPDDWDVALGLLVTNYAAIDQLDAKGATSVAKHYGSRDAMIEAGKKRNALRQVVASRLAREVMPK*
JGI26341J46601_100593621	3300003219	Bog Forest Soil	YHIKPGQGEAYWKDIREHGKPVFDALKKEGLISDYKFWLNETTDHPGDWDVAIGVLHPNYAALDSLDAKGATIVSKHYGSRDAMLDAGKKRQDYREVVMSKLAREIMPK*
JGI26338J50219_10047282	3300003367	Bog Forest Soil	TVEHPGDWDVCVAILYANWAALDELDAKGATVVIKHYGSREAMIEGAKKRSELRDLVRSALAREVMPK*
Ga0062385_112929551	3300004080	Bog Forest Soil	YKKEGLISDYKMWLNDTTDHPGDWDVAVGILFPNYAALDAVDAKAATISAKHYGSRDAMIEAGKKRNDLREVVASKLAREVMPK*
Ga0062387_1004602652	3300004091	Bog Forest Soil	TYYHIKAGQGEAFWKDLRENLKPVYESLKKEGLISDYKVWTNATTDGPADWDVAVGLMMANYAAIDQLDAKAATIVAKHYGTRDAMIEAGKKRSELRDVVASKLAREVIPK*
Ga0062387_1009042251	3300004091	Bog Forest Soil	SLKKEGLISDYKVWTNATADSPADWDVAVGLVVANYAAIDQLDAKAATSIAKHYGTRDAMIEAGKKRSELREVVASKLAREVIPK*
Ga0062389_1044917081	3300004092	Bog Forest Soil	PSYEALKKEGIINDYKVWTNVTTDSPHDWDVALGLMFPNWAAIDQADARAATIIAKHYGSREAMIEAGKKRNDIREVVASKLAREVMPK*
Ga0062388_1008367851	3300004635	Bog Forest Soil	FWKDFRENLKPVYESLKKEGLISDYKVWTNATTDSPADWDVAVGLVVANYAAIDQLDAKAATSIAKHYGTRDAMIEAGKKRSELREVVASKLAREVIPK*
Ga0062388_1021684321	3300004635	Bog Forest Soil	EAFWKDFRENLKPVYESLKKEGLIVDYKVWTNATTDSANDWDVALGLMVANYAAIDQLDAKAATIVTKHYGTRDAMIEAGKKRGELREVVASKLAREVIPK*
Ga0066388_1034297112	3300005332	Tropical Forest Soil	NATTDGPNDWDVAVALVFPNYAALDQLDAKAATIAAKHYGSRDAMIDAGKKRNDLREVVMSKLGREVMPK*
Ga0066388_1040568581	3300005332	Tropical Forest Soil	IKAGQGEAFWKDFRENLKPVYDAVKKEGWLTDYKVWTNVTTEGPNDWDVAIGLLFPNWASLDQIDAKAATISAKHYGSREAMLEAGKKRNDIREVVASKLAHEVTPK*
Ga0070671_1015546921	3300005355	Switchgrass Rhizosphere	VARYLLPYQAGSGGTVWKDFRENLKPVYESLKKENFITDYKVWNNVTTDGPNDWDVAVALVFPNYAALDQADAKAATVVAKHYGSRDAMIEAGKK
Ga0070710_112821991	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	YFHLKPGQGEAFWKDFRENLKPVYESLKKERIISDYKVWTNATTENPNDWDVAVGLMFANWAALDEVDAKAATIVAKHYGSRDAMIDAGKKRNDLREVVMSKLAREVMPK*
Ga0066903_1058030622	3300005764	Tropical Forest Soil	WTNLTTDRPDDWDVAVGLLFPKWAALDQIDAKAATISAKHYGSRDAMLDAAKKRNDIRDVVMSKLAHEVMPK*
Ga0066903_1077425201	3300005764	Tropical Forest Soil	FWKDFRENLKPVYESLKKEQIISDYKVWTNATTENPNDWDVAVGLMYASWAALDQIDAKAATIAAKHYGSRDAMIDAGKKRNDLREVVMSKLAREVMPK*
Ga0080027_100194644	3300005993	Prmafrost Soil	KPVWESLKKEGMISDYKVWTNVTLDSPGDWDVAVGLMMANYAAIDQLDAKAATIAAKHYGSREAFIEAGKKRNELREVVSSRLAREVMPR*
Ga0075028_1000425661	3300006050	Watersheds	NLKPIYESLKKEGLLADYKVWTNVTVDQPGDWDVALGLMFANYAALDQLDAKAATSVAKHYGSRDAMIEAGKKRNDLREVVSSKLAREVMPK*
Ga0075019_100709583	3300006086	Watersheds	TYYHIKPGQGEAFWKDIREHGKPVFEALKKEGLISDVKFWLNDTTDHPGDWDVAIGMLYPNYAAIDGLDAKGATIVAKHYGSRDVMIEAGKKRQDYREVVMSKLAREITPK*
Ga0075015_1009932612	3300006102	Watersheds	LITEYKVWTNVTTDSPNDWDVALGLLFANWAALDQADAKAATIIAKHYGSREAMLEAGKKRNELREVVSSKLAREVMPK*
Ga0075030_1005392283	3300006162	Watersheds	VTTDSPHDWDVALGLMLPNWAAIDQADARAATIIAKHYGSREAMIEAGKKRNDLREVVASKLAREVMPK*
Ga0075018_100905461	3300006172	Watersheds	TYYHITPGQGEAFWKDFRENLKPVYDSLKKEGLISDYKIWTNVTTDHPGDWDVAVGLLVTNYAAIDQLDAKAATSVAKHYGSRDAMIEAGKKRNALREVVASKLAREVMPK*
Ga0070716_1007750972	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	YKVWLNVTTEHPDDWDVAVGLLLPNYAAIDQLDAKAATIVAKHYGSREAMLEAGKKRNDLRIVIASRLAREVMPK*
Ga0070765_1019166201	3300006176	Soil	KPGQGEAFWKDFRENLKPVYESLKKEGLISDYKVWTNITTDSPGDWDVAVGLMVANYAAIDQLDAKAATSVAKHYGSRDAMIEAAKKRNELREVVSSKLAREVMPK*
Ga0066660_114140802	3300006800	Soil	KDFRENLKPSYDALKKEGILKDYKVWTNVTTDSAHDWDVALGLMFPNWAALDQSDARTATIIAKHYGSREAMIEAGKKRNDLREVVASKLAHEVMPK*
Ga0116220_102493592	3300009525	Peatlands Soil	PVWRVTYYHIKPGQSEAFWKDFRENLKPVYDAVKKEGWLTDYKVWGNVTTDSVGDWDVAVGLMFPNWAALDQLDAKAATISAKHYGSRDAMIEAGKKRNDIREVVASKLAHELMPK*
Ga0116220_106171502	3300009525	Peatlands Soil	YKVWTNVTTDNPNDWDVALGIMVANWATIDQIDAKAATIVAKHYGSREAMLEAARKRNDIRDVVMSKLAREVTPK*
Ga0116138_11171972	3300009552	Peatland	WNDFREHLKPSYDALKKEGILSDYKVWNNVTTDGPNDWDVAVGLMFPNWSALDQSDAKSASIMAKHYGSRDAMIEAGKKRNDLREVVASKLAHEVMPK*
Ga0116135_10969461	3300009665	Peatland	KKEGLISDYKVWTNVTTDSPGDWDVAVGLMVANYAAIDQLDAKAATSVAKHYGSRDAMIEAGKKRNDLREVVASKLAREVMPK*
Ga0126380_121837881	3300010043	Tropical Forest Soil	MITDYKIWTNLTTDRPDDWDVAVGLLFPKWAALDQIDAKAATISAKHYGSRDAMLDAAKKRNDIRDVVMSKLAHEVMPK*
Ga0126384_116542422	3300010046	Tropical Forest Soil	LKKENLITDYKVWTNATTDGPNDWDVAVALVFANYAALDQLDAKAATLVAKHYGSRDAMIDAGKKRNDLREVVMSKLGREVMPK*
Ga0074046_102774181	3300010339	Bog Forest Soil	LINDYKVWTNPTTERPDDWDVAVGLLFANWATLDQLDAKAATISTKHYGSREAMIEAGKKRNELRELVSSHLAREVMPR*
Ga0074046_108393271	3300010339	Bog Forest Soil	DYKVWGNVTTDSAVDWDIAIGLMFPNWAALDQTDAKAATISAKHYGSREAMLEAAKKRNDIREVVASKLAHELLPK*
Ga0126378_100916412	3300010361	Tropical Forest Soil	LTTDNPDDWDVAVGILFPNYAALDAVDAKAATIVAKHYGSRDAMIDAGKKRNELRTVVASKLAREVMPK*
Ga0126383_118674752	3300010398	Tropical Forest Soil	SKVWTNLTTDNPDDWDVAVGILFPNYAALDAVDAKAATIVAKHYGSRDAMIDAGKKRNELRTVVASKLAREVMPK*
Ga0150983_107749711	3300011120	Forest Soil	TNVTTDSPGDWDVAVGLMVANYAAIDQLDAKAATSFAKHYGSREAMIEAGKKRNELREVVASKLAREVMPK*
Ga0150983_167141751	3300011120	Forest Soil	VFESLKKEGLISDYKFWLNVTTDHPGDWDVAIGTLYPNYAAIDGLDAKAATSIAKHYGSRDAMIEAGKKRNDLREVVMSKLAREVMPK*
Ga0137396_110279551	3300012918	Vadose Zone Soil	MISDYKVWTNVTTDSPGDWDVAVGLMFPNWAALDQIDAKAATISAKHYGSRDAMIEAGKKRNDLREVVASKLAHEVMPK*
Ga0126375_117674801	3300012948	Tropical Forest Soil	FHLKPGQAEPFWKDFRDNLKPVYESLKKESFITDYKVWTNATTDGPNDWDVAVALVYANWAALDQADAKAATLVAKHYGSRDAMIEAGKKRNDLREVVMSKLGREVMPK*
Ga0164300_109859361	3300012951	Soil	LKPGQGEAFWKDFRENLKPVYDSLKKESIISDYKVWTNATTDTSNDWDVCVAVMFANCAALDQVDVKGATIVAKHYGSRDAMIEAGKKRNDLRDVVMS
Ga0164305_119413001	3300012989	Soil	YHLKPGQGEAFWKDFRENLKPVYDSLKKESLISDYKVWTNATTDTSSDWDVCVAVMFANWAALDQVDSKGATIVAKHYGSRDAMIEAGKKRNDLRDVVMSKLAREVMPK*
Ga0181538_100333077	3300014162	Bog	VTTDRADDWDVAVATMYPNFAAIDQIDAKAATISTKHYGSREAMREPAKKRSEIREVVASKLAREVMPK*
Ga0181526_106408762	3300014200	Bog	VWRVTYLQIKPGQGEAFWKDFRENLRPSYDAVKKEGILKDYKVWGNVTTDGPHDWDIAIGLMYPNWAALDQGDARAATILAKHYGSREAMIEAGKKRNDIREVVASKLAHELMPK*
Ga0182024_119081192	3300014501	Permafrost	DALKKEGILSDYKVWNNVTTDGPNDWDVAVGLMFPNWSALDQSDAKSATIMAKHYGSREAMIEAGKKRNDLREVVASKLAHEVMPK*
Ga0167643_10648932	3300015089	Glacier Forefield Soil	KVWTNPTVDHPGDWDVAVGLQYANYAALDELDAKAATVVIKHFGTREAMMEVAKKRTELRDVVASHLAREVMVK*
Ga0132256_1030386742	3300015372	Arabidopsis Rhizosphere	YESLKKENFITDYKVWNNVTTDGPNDWDVAVALVFPNYAALDQVDAKAATLVAKHYGSRDAMIEAGKKRNDLRDVVMSKLGREVMPK*
Ga0182033_107011731	3300016319	Soil	NLKPVYDAVKKEGWLTDYKVWTNVTTEGPNDWDVAIGLLFPNWASLDQIDAKAATISAKHYGSREAMLEAGKKRNDIREVVASKLAHEVTPK
Ga0182032_111260942	3300016357	Soil	TTEGPNDWDVAIGLLFPNWASLDQIDAKAATISAKHYGSREAMLEAGKKRNDIREVVASKLAHEVTPK
Ga0182032_120545392	3300016357	Soil	TTDRPDDWDVAVGLLFPKWAALDQIDAKAATISAKHYGSRDAMLDAAKKRNDIRDVVMSKLAHEVMAK
Ga0182038_118672521	3300016445	Soil	LITDYKFWLNITLDHPDDWDVALGILYPNYAAIDALDAKGATIAAKHYGSREAMIEAGKKRNDLREVVASKLAREVTPK
Ga0187853_102812131	3300017940	Peatland	WTNVTTDVPHDWDIAVGYTIPNWATIDQLDAKAATLIAKHYGSREAMIEAGKKRNDIRTVVASKLAREVMPK
Ga0187853_104350742	3300017940	Peatland	TNVTTDAPHDWDIAVGYTIPNWATIDQLDAKAATLIAKHYGSREAMIEAGKKRNDIRTVVASKLAREVMPK
Ga0187819_101585371	3300017943	Freshwater Sediment	IKPGQGEPFWKDFRENLKPSYEALKKEGIINDYKVWTNVTTDSPHDWDVALGLMFPNWAAIDQADAKAATIIAKHYGSREAMIEAGKKRNDLREVVASKLAREVMPK
Ga0187819_107595412	3300017943	Freshwater Sediment	KPVYDAVKKEGWLTDYKVWGNVTTDSAGDWDVAVGLMFPNWAALDQLDAKAATISAKHYGSREAMIEAGKKRNDIREVVASKLAHELMPK
Ga0187817_109279231	3300017955	Freshwater Sediment	GQGDAFWKDFRENLKPVYDEVKKEGMISDYKVWTNVTTDGPSDWDVAIGLMFPNWAALDQIDAKAATISTKHYGSRDAMIEAGKKRNDLREVVASKLAHEVMPK
Ga0187891_12994281	3300017996	Peatland	TNVTTDGPHDWDIAFGYMVPNWATIDQLDAKAATLIAKHYGSREAMIEAGKKRNDIRTVVASKLAREVMPK
Ga0187804_103215962	3300018006	Freshwater Sediment	IHDYKVWTNVTTDGPHDWDVALGLMFPNWAAMDQGDARAATIIAKHYGSREAMIEAGKKRNDLREVVASKLAHEVMPK
Ga0187863_102710822	3300018034	Peatland	LKKEGLISDYKVWTNVTTDSPGDWDVAVGLMVANYAAIDQLDAKAATSVAKHYGSRDAMIEAGKKRNDLREVVASKLAREVMPK
Ga0187883_103512111	3300018037	Peatland	VYESLKKEGLISDYKVWTNVTTDSPGDWDVAVGLMVANYAAIDQLDAKAATSVAKHYGSRDAMIEAGKKRNDLREVVASKLAREVMPK
Ga0187871_105432831	3300018042	Peatland	QAEPFWNDFREHLKPSYEALKKQGILSDYKVWTNVTTDGPNDWDVALGLMFPNWSALDQSDAKAATIFAKHYGSREAMIEAGKKRNDLREVVASKLAHEVMPK
Ga0187887_105958892	3300018043	Peatland	SYDALKKEGLISDYKVWTNVTTDGPHDWDVALGLMFPNWAAMDQADAKAATIIAKHYGSREAMIEAGKKRNDIREVVASKLAHEVMPK
Ga0187887_108293111	3300018043	Peatland	KEGILSDYKVWNNVTTDGPNDWDVAVGLMFPNWSALDQSDAKSATIMAKHYGSRDAMIEAGKKRNELREVVASKLAHEVMPK
Ga0187784_101907843	3300018062	Tropical Peatland	EYKVWTNVTTESPADWDVAIGLLYPNWAALDQLDTKAATISTKHYGSRDAMIEAGRKRSEIRDVVASKLAHEVVPK
Ga0187784_109936961	3300018062	Tropical Peatland	KPGQGEPFWKDFRENLKPSYEALKREGIITDYKVWTNVTTDSREDWDVALGLLFPNWAAIDQADSKAATIIAKHYGSRDAMIEAGKRRNDLREVIASKLAREVMPK
Ga0187771_109155381	3300018088	Tropical Peatland	DYKIWINVTTDKPGDWDVAVGLLFPNWAALDQGDAKAATISSKHYGSREAMLDAAKKRNDIREVVMSKLAREVTPK
Ga0187771_112915761	3300018088	Tropical Peatland	PVWRVTYYHILPGQGEAFWKDFRENLKPVLDAVKKEGMITDYKVWTNVASDRPGDWDVAVGLLYPNWAALDQIDAKAATISAKHYGSRDAMLAAAKKRNDIREVVMSKLAHEVMPK
Ga0210407_106585922	3300020579	Soil	WINATTDHPDDWDVAVGLMVANYAAIDQLDAKAATSVAKHYGSREAMIEAGKKRNDLRELVASKLAREVMPK
Ga0210407_110661101	3300020579	Soil	AEAFWKDVRENLKPTYEALKKEGLISDYKFWTNVTTDNPGDWDVAVGLMVANYAAIDQLDAKAATSVAKHYGSRDAMIEAGKKRAELREVVASKLAREVMPK
Ga0210403_106155501	3300020580	Soil	WKDVREHIKPIFESLKKEGLFSDYKFWLNDTTDHPGDWDVAIGVLYPNYAAIDALDAKGATIVAKHYGSRDAMIEAGKKRNDLRELVMSKLAREITPK
Ga0210399_111212412	3300020581	Soil	VREHVKPVFESLKKEGLISEYKFWLNDTTDHPGDWDVAVGLLYPNYAAMDALDAKAATIVAKHYGSRDAMIEAGKKRNDLREVVMSKLAREIMPK
Ga0210401_106371662	3300020583	Soil	WKDIRENMKPVWDSLKKEGLISDYKMWTNVTTDSPGDWDVAVGLMVANYAAIDQLDAKAATSVAKHYGSRDAMIEAGKKRNELREVVASKLAREVMPK
Ga0210404_103907991	3300021088	Soil	LISDHKVWVNVTTDHTDDWDVALGLLVANYAAIDQLDAKAGTSVAKHYGSRDAMIEAGKKRNALREVVASKLAREVMPK
Ga0210406_109516142	3300021168	Soil	FTYYHLKPGQGEAFWKDFRENLKPVYDSLKKESIISDYKVWTNATTDTSNDWDVCVAVMFANWAALDQVDSKGATIVAKHYGSRDAMIEAGKKRNDLRDVVMSKLAREVMPK
Ga0210400_105808641	3300021170	Soil	EAFWKDFRENVKPVYESLKKEGLISDYKVWTNVTTDHPGDWDVAVGLMVANYAAIDQIDAKAATSVAKHYGSRDAMLEAARKRNELREVVASKLAREVMPK
Ga0210408_100176766	3300021178	Soil	VTTDSPGDWDVAVGLMVANYAAIDQLDAKAATSVAKHYGSRDAMIEAGKKRNELREVVASKLAREVMPK
Ga0210408_114730522	3300021178	Soil	YKVWTNATTENPNDWDVAVGLMFANWAALDEVDAKAATIVAKHYGSRDAMIDAGKKRNDLREVVMSKLAREVMPK
Ga0210396_111228131	3300021180	Soil	DYKVWINATTDGPEGWDIAVGLLFPNWAALDQIDAKAATISAKHYGSREAMIEAGKKRSEIREVVMSKLAREVLPK
Ga0210387_110882341	3300021405	Soil	EGLSSDYKFWTNVTTDNPGDWDVAVGLMVANYAAIDQLDAKAATSVAKHYGSRDAMIEAGKKRAELREVVASKLAREVMPK
Ga0210387_111207922	3300021405	Soil	KPGQGEAFWKDLRENLKPVYESLKKEGLISDYKVWTNVTTDGPADWDVAVGLMMANYAAIDQLDAKAATTVAKHYGSRDAMIEAGRKRNDLREVVASKLAREVIPK
Ga0210386_111926651	3300021406	Soil	VYESLKKEGLLSDVKFWLNDTTDHPGDWDVAIGFLYPNYAAMDGIDAKAATIVAKHYGSRDAMLEAGKKRQDLREVVMSKLAREVMPK
Ga0210394_111147112	3300021420	Soil	KKEGLLSDVKFWLNDTTDHPGDWDVAIGFLYPNYAAIDGIDAKAATIVAKHYGSRDAMLEAGKKRQDLREVVMSKLAREVMPK
Ga0210391_103793612	3300021433	Soil	ENLKPIYESLKKEGMISDYKFWTNVTTDNPGDWDVAVGLMVANYAAIDQLDAKAATSVAKHYGSRDAMLEAGKKRNELREVVASKLAREVMPK
Ga0210402_103355482	3300021478	Soil	YKVWTNVTTDGPADWDVAVGLMMANYAAIDQLDAKAATTVAKHYGSRDAMIEAGRKRNDLREVVASKLAREVIPK
Ga0210402_118184171	3300021478	Soil	WKDFRENLKPIYESLKKEGLISDYKVWVNVTTDHPGDWDVALGLLVANYAAIDQLDAKAATSIAKHYGSRDAMIEAGKKRNALREVVASKLAREVMPK
Ga0210410_106953201	3300021479	Soil	NLKPLYADFKKEGLISDYKMWLNVTTDHPGDWDVAVGILYPNYAAIDALDAKGATIAAKHYGSRDAMIEAGKKRNDLREVVASKLAREVTPK
Ga0210410_109211582	3300021479	Soil	YYRIKPGQGEAFWKDFRENVKPVYESLKKEGLLSDYKVWTNVTTDSPADWDVAVGTMVANYAAIDQLDAKAATSVAKHYGSRDAMIEAAKKRTELREVVASKLAREVMPK
Ga0126371_105934141	3300021560	Tropical Forest Soil	LTTDNPDDWDVAVGILFPNYAALDAVDAKAATIVAKHYGSRDAMIDAGKKRNELRTVVASKLAREVMPK
Ga0242665_101725251	3300022724	Soil	NDTTDHPGDWDVAVGILYPNYAALDGVDAKGATIVAKHYGSRDAALEAGKKRNDLREVVASKLAREVMPK
Ga0242665_103279382	3300022724	Soil	LISDYKVWTNVTTDHPGDWDVAVGLMVANYAAIDQIDAKAATSVAKHYGSRDAMLEAARKRNELREVVASKLAREVMPK
Ga0242654_103549792	3300022726	Soil	VWTNVTIDSPNDWDVAVGLMYPNWAALDQLDAKAATIAAKHYGSRDAMLEAGKKRNELREVVASKLAHEVMPK
Ga0224551_10822671	3300023259	Soil	AVKKEGIITDYKVWTNVTTDGPHDWDVAVGLMFPNWGSIDQADARAATIIAKHYGSREAMIEAGKKRNDIREVVASKLAREVMPK
Ga0207680_106848952	3300025903	Switchgrass Rhizosphere	WTNATTDGPNDWDVAVAVVFPNYAALDQVDAKAATLVAKHYGSRDAMIEAGKKRNDLRDVVMSKLGREVMPK
Ga0207700_107032321	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	GEAFWKDFRENLKPSYEALKKEGIINDYKVWTNATTDNPHDWDVALALMFPNWAAIDQADAKAATIIAKHYGSRDAMIEAGKKRNDLREVVASKLAREVMPR
Ga0207686_111547591	3300025934	Miscanthus Rhizosphere	ENLKPVYESLKKEGIISDYKVWNNVTTDTANDWDVCVGLMFANWAALDQADAKGATIVAKHYGSRDAMIEAGKKRNDLRDVVMSKLAREVMPK
Ga0209863_100153353	3300026281	Prmafrost Soil	KPVWESLKKEGMISDYKVWTNVTLDSPGDWDVAVGLMMANYAAIDQLDAKAATIAAKHYGSREAFIEAGKKRNELREVVSSRLAREVMPR
Ga0257165_10858922	3300026507	Soil	KPVLESLKKEGLLTDYKYWLNDTTDHPGDWDVAVGLLYPNYAAMDALDAKAATIVAKHYGSRDAMLEAGKKRNDLREVVMSKLAREIMPK
Ga0179587_105632842	3300026557	Vadose Zone Soil	GLISDYKVLLNVTTDRPDDWDVEVALLIPNYAALEQFDAKAATSAAKHYGTREAWVEAGKKRNELRELVAFKLAREVMPKQE
Ga0209419_10470452	3300027537	Forest Soil	DSLKKESIISDYKVWTNATTDTSNDWDVCVAVMFANWAALDQVDAKGATIVAKHYGSRDAMIDAGKKRNDLRDVVMSKLAREVMPK
Ga0209003_10124161	3300027576	Forest Soil	PGQGEAFWKDFRENLKPSYAALKKEGILSDYKVWTNVTTDSPGDWDVALALLFPNWAALDQGDARAATILAKQYGSREAMIEAGKKRNDIREVVASKLAHEVMPK
Ga0209517_105521541	3300027854	Peatlands Soil	VWYNVTTDGPHDWDVAVGLMIPNWATIDQLDAKAATLIAKHYGSREAMIEAGKKRNEIREVVASKLAREIMPK
Ga0302301_10957592	3300028731	Palsa	QGEPFWKDFRENLKPVYEALKKEGLLNDYKVWTNPETDHPDDWDVAVGLLFANYATLDQLDAKAATISAQHYGSRDAMIEAGKKRADIREVTASKLAREVMPK
Ga0302219_100121746	3300028747	Palsa	ITDFKVWLNDTTDHPGDWDVAVGLMFPNYAALDQIDAKAATISAKHYGSRDAMIEAGKKRADIREVVSSHLAREVTPK
Ga0311340_100707305	3300029943	Palsa	TNVTTDGPNDWDVAVGLMFPNWAAFDQSDAKTATIFAKHYGSREAMIEAGKKRNDIREVVASKLAHEVMPK
Ga0302300_10596562	3300030042	Palsa	VTYYHFKPGQGEPFWKDFRENLKPVYEALKKEGLLNDYKVWTNPETDHPDDWDVAVGLLFANYATLDQLDAKAATISAQHYGSRDAMIEAGKKRADIREVTASKLAREVMPK
Ga0302300_10778411	3300030042	Palsa	DFKVWLNDTTDHPGDWDVAVGLMFPNYAALDQIDAKAATISAKHYGSRDAMIEAGKKRADIREVVSSHLAREVTPK
Ga0302306_101518911	3300030043	Palsa	KVWTNVTTDGPNDWDVAVGLMFPNWAAFDQSDAKTATIFAKHYGSREAMIEAGKKRNDIREVVASKLAHEVMPK
Ga0311353_104740382	3300030399	Palsa	KPGQSEPFWKDFREHLKPSYDAVKKEGIITDYKVWTNVTTDGPHDWDVAVGLMFPNWGAIDQADARAATIIAKHYGSREAMIEAGKKRNDIREVVASKLAREVMPK
Ga0302183_100001131	3300030509	Palsa	DTTDHPGDWDVAVGLMFPNYAALDQIDAKAATISAKHYGSRDAMIEAGKKRADIREVVSSHLAREVTPK
Ga0265461_114780962	3300030743	Soil	LISDYKVWTNVTTDSPGDWDVAVGLMVANYAAIDQLDAKAATSVAKHYGSREAMIEAGKKRNELREVVSSKLAREVMPK
Ga0075385_118754551	3300030854	Soil	MKLALYMISDYKVWTNVTTDGPNDWDVAVGLLFPNWAALDQIDAKAATISAKHYGSREAMIEAGQKRNGIREVVMSKLAHEVMPK
Ga0302307_100838972	3300031233	Palsa	VKKDGMITDFKVWLNDTTDHPGDWDVAVGLMFPNYAALDQIDAKAATISAKHYGSRDAMIEAGKKRADIREVVSSHLAREVTPK
Ga0310686_1036019353	3300031708	Soil	RIVGIDGRHANVPIVRPDDWDVCVATIYPNYAAIDQIDAKAATISAKHYGSREAMLEAGKKRNEYREVVASKLAREVMPK
Ga0307474_106753652	3300031718	Hardwood Forest Soil	KPSYDAMKKEGILSDYKVWTNVTLDGPNDWDVAVGLMYPNWSALDQSDAKAATVIAKHYGSREAMIEAGKKRNELREIVASKLAHEVMPK
Ga0306917_112097502	3300031719	Soil	KPGQGEAFWKDFRENLKPVYDAVRAEGMITDYKVWTNLTTDRPDDWDVAVGLLFPKWAALDQIDAKAATISAKHYGSRDAMLDAAKKRNDIRDVVMSKLAHEVMAK
Ga0306918_102443961	3300031744	Soil	ITDYKVWTNLTTDRPDDWDVAVGLLFPKWAALDQIDAKAATISAKHYGSRDAMLDAAKKRNEIREVVMSKLAHEVMPK
Ga0307475_101662023	3300031754	Hardwood Forest Soil	GLVSDYKMWLNDTTDHPGDWDVALGVLYPNYAALDGLDAKGATIVAKHYGSRDAMIEAGKKRNDLREVVASKLAREVTPK
Ga0318546_111459892	3300031771	Soil	RVTYYHIKPGQGEAFWKDFRENLKPVYDAVKAEGMITDYKVWTNLTTDRPDDWDVAVGLLFPKWAALDQIDAKAATISAKHYGSRDAMLDAAKKRNDIRDVVMSKLAHEVMPK
Ga0307478_100258703	3300031823	Hardwood Forest Soil	FWKDFRENLKPSYEALKKEGILKDYKVWTNVTTENAHDWDVALGLMFPNWAAFDQSDARTATIVAKHYGSREAMIEAGKKRNDLREVVASKLAHEVMPK
Ga0307478_104909091	3300031823	Hardwood Forest Soil	TDHPGDWDVALGVLYPNYAALDGLDAKGATIVAKHYGSRDAMVEAGKKRNDLRDVVASKLAREVMPK
Ga0307478_105849401	3300031823	Hardwood Forest Soil	GQAEAFWKDVRENLKPTYEALKKEGLISDYKFWTNVTTDNPADWDVAVGLMVANYAAIDQLDAKAATSVAKHYGSREAMIEAGKKRAELREVVASKLAREVMPK
Ga0310917_107754781	3300031833	Soil	DTTDHPNDWDVAIGILFPNYAALDTVDAKAATIAAKHYGSREAMIETGKKRNDLREVVASKLAREVIPK
Ga0318520_110661791	3300031897	Soil	KPVYDAVKKEGMITDYKVWTNLTTDRPDDWDVAVGLLFPKWAALDQIDAKAATISAKHYGSRDAMLDAAKKRNDIRDVVMSKLAHEVMPK
Ga0310913_110371852	3300031945	Soil	LITDYKVWTNATTDGPNDWDVAVALVFANYAALDQLDAKAATVVAKHYGSRDAMIDAGKKRNDLREVVMSKLGREVMPK
Ga0306926_129402012	3300031954	Soil	DYKFWLNDTIDHPNDWDVAIGILFPNYAALDTVDAKAATIAAKHYGSRDAMIEAGKKRNDLREVVASKVAREVMPK
Ga0318532_103062431	3300032051	Soil	VWTNLTTDRPDDWDVAVGLLFPKWAALDQIDAKAATISAKHYGSRDAMLDAAKKRNEIREVVMSKLAHEVMPK
Ga0318570_100390993	3300032054	Soil	VFTNPVVDHPHDWDVAVATMYPNWAALDGLDAKGASIATKHYGTRDAMIEAGKKRADLREIVASHLAREVTPK
Ga0307471_1016285712	3300032180	Hardwood Forest Soil	LKKEGLLSDYKVWTNVTTDSPGDWDVAVALMFANYAAIDQLDAKAATSVAKHYGSRDAMLEAAKKRNELRDVVSSKLAREVMPK
Ga0307471_1016361321	3300032180	Hardwood Forest Soil	MFPLVVIRHAPHRTNIIKPGQGEAFWKDIRENMKPVYADFKKEGLISDYKVWLNDTTDHPDDWDVAVGILFPNYAAMDALDSKAATIAAKHYGSRDAMIEAGKKRNDIRQVVMSKLAREVMPQ
Ga0307472_1016290631	3300032205	Hardwood Forest Soil	MITDYKVWTNVTTDGPNDWDVAVGLLFPNWAALDQIDAKAATISAKHYGSREAMIEAGQKRNGIREVVMSKLAHEVMPK
Ga0348332_127156191	3300032515	Plant Litter	ISDYKVWTNVTTDSPADWDVAVGLMVANYAAIDQLDAKAATSVAKHYGSRDAMIEAAKKRNELREVVASKLAREVMPK
Ga0334854_062598_646_885	3300033829	Soil	LLSGYRVWNNVTQDRADDWDVAVATIYPNFAAIDQIDAKAATISTKHYGSREAMLEAAKKRSEIREVVASKLAREVTPK
Ga0370492_0190569_2_211	3300034282	Untreated Peat Soil	VTTDSPGDWDIALGLMFQNWAALDQSDAKTATILAKHYGSREAMIEAGKKRNDIREVVASKLAHEVMPK

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F062137

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences