Metagenome / Metatranscriptome Family F062125

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F062125
Family Type	Metagenome / Metatranscriptome
Number of Sequences	131
Average Sequence Length	66 residues
Representative Sequence	MAIAPLQPHRSWYRHFWYAERSPRDTLTDRTLLFAIVALSLVVGGILLVRHYAAPRAAGQLPVAQAAR
Number of Associated Samples	99
Number of Associated Scaffolds	131

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	76.34 %
% of genes near scaffold ends (potentially truncated)	34.35 %
% of genes from short scaffolds (< 2000 bps)	87.02 %
Associated GOLD sequencing projects	86
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.43

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (61.069 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere (13.741 % of family members)
Environment Ontology (ENVO)	Unclassified (22.137 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (46.565 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 48.96% β-sheet: 0.00% Coil/Unstructured: 51.04%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.43
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.43
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 131 Family Scaffolds
PF00378	ECH_1	35.88
PF03480	DctP	7.63
PF14023	DUF4239	6.11
PF02558	ApbA	5.34
PF02776	TPP_enzyme_N	3.82
PF01960	ArgJ	3.82
PF07883	Cupin_2	2.29
PF08546	ApbA_C	2.29
PF01925	TauE	0.76
PF13561	adh_short_C2	0.76
PF04909	Amidohydro_2	0.76
PF00180	Iso_dh	0.76
PF13521	AAA_28	0.76
PF00400	WD40	0.76
PF00702	Hydrolase	0.76
PF13579	Glyco_trans_4_4	0.76

COG ID	Name	Functional Category	% Frequency in 131 Family Scaffolds
COG1364	Glutamate N-acetyltransferase (ornithine transacetylase)	Amino acid transport and metabolism [E]	3.82
COG1893	Ketopantoate reductase	Coenzyme transport and metabolism [H]	2.29
COG0730	Sulfite exporter TauE/SafE/YfcA and related permeases, UPF0721 family	Inorganic ion transport and metabolism [P]	0.76

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	61.07 %
Unclassified	root	N/A	38.93 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	61.07 %
Unclassified	root	N/A	38.93 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	61.07 %
Unclassified	root	N/A	38.93 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	49.62 %
Unclassified	root	N/A	38.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	38.93 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	37.40 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	2.29 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	38.93 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	25.95 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	2.29 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2.29 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	38.93 %
unclassified Rhodospirillales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales	3.82 %
Acetobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	2.29 %
unclassified Hyphomicrobiales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales	0.76 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	0.76 %
Alphaproteobacteria bacterium MarineAlpha10_Bin2	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium MarineAlpha10_Bin2	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	38.93 %
Rhodospirillales bacterium 69-11	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium 69-11	3.05 %
Rhodopila	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Rhodopila	1.53 %
Rhizobiales bacterium GAS191	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Rhizobiales bacterium GAS191	0.76 %
Rhodospirillales bacterium URHD0088	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	0.76 %
Cupriavidus	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Cupriavidus	0.76 %
Alphaproteobacteria bacterium MarineAlpha10_Bin2	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium MarineAlpha10_Bin2	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	38.93 %
Rhodospirillales bacterium 69-11	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium 69-11	3.05 %
Rhodopila	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Rhodopila	1.53 %
Cupriavidus gilardii	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Cupriavidus → Cupriavidus gilardii	0.76 %
Rhizobiales bacterium GAS191	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Rhizobiales bacterium GAS191	0.76 %
Rhodospirillales bacterium URHD0088	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	0.76 %
Alphaproteobacteria bacterium MarineAlpha10_Bin2	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium MarineAlpha10_Bin2	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	38.93 %
Rhodospirillales bacterium 69-11	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium 69-11	3.05 %
Rhodopila	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Rhodopila	1.53 %
Cupriavidus gilardii CR3	strain	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Cupriavidus → Cupriavidus gilardii → Cupriavidus gilardii CR3	0.76 %
Rhizobiales bacterium GAS191	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Rhizobiales bacterium GAS191	0.76 %
Rhodospirillales bacterium URHD0088	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	0.76 %
Alphaproteobacteria bacterium MarineAlpha10_Bin2	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium MarineAlpha10_Bin2	0.76 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2189573004\|GZGWRS402JZZMZ	Not Available	515	Open in IMG/M
3300001867\|JGI12627J18819_10230366	All Organisms → cellular organisms → Bacteria	746	Open in IMG/M
3300002245\|JGIcombinedJ26739_100411638	Not Available	1230	Open in IMG/M
3300003219\|JGI26341J46601_10023397	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	2022	Open in IMG/M
3300004152\|Ga0062386_101235804	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium 69-11	621	Open in IMG/M
3300004635\|Ga0062388_100588916	All Organisms → cellular organisms → Bacteria	1016	Open in IMG/M
3300005329\|Ga0070683_101989246	Not Available	558	Open in IMG/M
3300005335\|Ga0070666_10349196	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	1058	Open in IMG/M
3300005336\|Ga0070680_100256712	All Organisms → cellular organisms → Bacteria → Proteobacteria	1478	Open in IMG/M
3300005435\|Ga0070714_100009643	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	7601	Open in IMG/M
3300005435\|Ga0070714_100847763	Not Available	886	Open in IMG/M
3300005435\|Ga0070714_100946469	All Organisms → cellular organisms → Bacteria	837	Open in IMG/M
3300005436\|Ga0070713_100046670	All Organisms → cellular organisms → Bacteria	3555	Open in IMG/M
3300005436\|Ga0070713_100122676	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	2281	Open in IMG/M
3300005436\|Ga0070713_101802142	All Organisms → cellular organisms → Bacteria	594	Open in IMG/M
3300005436\|Ga0070713_102300622	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Cupriavidus → Cupriavidus gilardii → Cupriavidus gilardii CR3	522	Open in IMG/M
3300005437\|Ga0070710_10199361	Not Available	1263	Open in IMG/M
3300005439\|Ga0070711_100475195	Not Available	1026	Open in IMG/M
3300005441\|Ga0070700_100977332	Not Available	694	Open in IMG/M
3300005534\|Ga0070735_10047501	All Organisms → cellular organisms → Bacteria	2860	Open in IMG/M
3300005534\|Ga0070735_10264115	All Organisms → cellular organisms → Bacteria → Proteobacteria	1042	Open in IMG/M
3300005537\|Ga0070730_10019403	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	5315	Open in IMG/M
3300005541\|Ga0070733_11134619	Not Available	524	Open in IMG/M
3300005564\|Ga0070664_101630464	Not Available	611	Open in IMG/M
3300005614\|Ga0068856_100368753	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	1455	Open in IMG/M
3300005614\|Ga0068856_102657267	Not Available	506	Open in IMG/M
3300005764\|Ga0066903_100342751	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	2408	Open in IMG/M
3300005764\|Ga0066903_105205411	All Organisms → cellular organisms → Bacteria → Proteobacteria	688	Open in IMG/M
3300005842\|Ga0068858_102099602	Not Available	559	Open in IMG/M
3300006028\|Ga0070717_11234850	Not Available	680	Open in IMG/M
3300006050\|Ga0075028_100733459	Not Available	597	Open in IMG/M
3300006102\|Ga0075015_100609205	Not Available	640	Open in IMG/M
3300006172\|Ga0075018_10769898	Not Available	526	Open in IMG/M
3300006175\|Ga0070712_100250979	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1414	Open in IMG/M
3300006175\|Ga0070712_100865848	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	778	Open in IMG/M
3300006755\|Ga0079222_11873482	Not Available	584	Open in IMG/M
3300006804\|Ga0079221_11625629	Not Available	524	Open in IMG/M
3300006806\|Ga0079220_11232068	All Organisms → cellular organisms → Bacteria → Proteobacteria	620	Open in IMG/M
3300006893\|Ga0073928_10555368	All Organisms → cellular organisms → Bacteria → Proteobacteria	816	Open in IMG/M
3300006893\|Ga0073928_10825139	All Organisms → cellular organisms → Bacteria	639	Open in IMG/M
3300006954\|Ga0079219_11001373	Not Available	693	Open in IMG/M
3300009177\|Ga0105248_12448561	Not Available	595	Open in IMG/M
3300010043\|Ga0126380_12236229	All Organisms → cellular organisms → Bacteria → Proteobacteria	506	Open in IMG/M
3300010048\|Ga0126373_10744248	All Organisms → cellular organisms → Bacteria	1040	Open in IMG/M
3300010048\|Ga0126373_12983354	Not Available	528	Open in IMG/M
3300010152\|Ga0126318_10208373	Not Available	630	Open in IMG/M
3300010154\|Ga0127503_10164028	Not Available	620	Open in IMG/M
3300010361\|Ga0126378_10044588	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	4088	Open in IMG/M
3300010375\|Ga0105239_10472798	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	1423	Open in IMG/M
3300010375\|Ga0105239_12855721	Not Available	564	Open in IMG/M
3300010379\|Ga0136449_100920335	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium 69-11	1421	Open in IMG/M
3300010399\|Ga0134127_12870800	Not Available	561	Open in IMG/M
3300010880\|Ga0126350_11303232	Not Available	595	Open in IMG/M
3300011119\|Ga0105246_12008480	Not Available	558	Open in IMG/M
3300012212\|Ga0150985_107072575	Not Available	659	Open in IMG/M
3300012469\|Ga0150984_115043661	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	3085	Open in IMG/M
3300012984\|Ga0164309_11623816	Not Available	554	Open in IMG/M
3300013105\|Ga0157369_11439147	All Organisms → cellular organisms → Bacteria	701	Open in IMG/M
3300013297\|Ga0157378_11714431	Not Available	675	Open in IMG/M
3300014497\|Ga0182008_10053781	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1993	Open in IMG/M
3300014497\|Ga0182008_10179130	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	1072	Open in IMG/M
3300014497\|Ga0182008_10318010	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	818	Open in IMG/M
3300014501\|Ga0182024_11822261	Not Available	680	Open in IMG/M
3300014968\|Ga0157379_11207378	Not Available	728	Open in IMG/M
3300015371\|Ga0132258_13191509	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	1131	Open in IMG/M
3300016341\|Ga0182035_11710472	Not Available	568	Open in IMG/M
3300020070\|Ga0206356_10596574	Not Available	569	Open in IMG/M
3300020582\|Ga0210395_10028629	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Rhodopila	4083	Open in IMG/M
3300020582\|Ga0210395_10290136	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1230	Open in IMG/M
3300021181\|Ga0210388_10819551	Not Available	806	Open in IMG/M
3300021401\|Ga0210393_10063042	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2921	Open in IMG/M
3300021403\|Ga0210397_10198719	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1432	Open in IMG/M
3300021403\|Ga0210397_11536147	All Organisms → cellular organisms → Bacteria → Proteobacteria	517	Open in IMG/M
3300021404\|Ga0210389_10728233	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	776	Open in IMG/M
3300021405\|Ga0210387_10699656	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	898	Open in IMG/M
3300021405\|Ga0210387_11296629	Not Available	630	Open in IMG/M
3300021406\|Ga0210386_11652616	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium MarineAlpha10_Bin2	530	Open in IMG/M
3300021475\|Ga0210392_10122510	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1742	Open in IMG/M
3300021477\|Ga0210398_10993523	Not Available	670	Open in IMG/M
3300021560\|Ga0126371_10048161	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	4070	Open in IMG/M
3300021560\|Ga0126371_10541601	All Organisms → cellular organisms → Bacteria	1313	Open in IMG/M
3300021560\|Ga0126371_12716827	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium 69-11	600	Open in IMG/M
3300022530\|Ga0242658_1148898	Not Available	602	Open in IMG/M
3300024249\|Ga0247676_1007076	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	1686	Open in IMG/M
3300025898\|Ga0207692_10402360	Not Available	854	Open in IMG/M
3300025906\|Ga0207699_11338556	Not Available	530	Open in IMG/M
3300025915\|Ga0207693_10303391	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Rhodopila	1251	Open in IMG/M
3300025916\|Ga0207663_10339096	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1135	Open in IMG/M
3300025917\|Ga0207660_10211566	All Organisms → cellular organisms → Bacteria → Proteobacteria	1519	Open in IMG/M
3300025928\|Ga0207700_10264924	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Rhizobiales bacterium GAS191	1473	Open in IMG/M
3300025928\|Ga0207700_10341770	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	1301	Open in IMG/M
3300025928\|Ga0207700_11565328	Not Available	584	Open in IMG/M
3300025929\|Ga0207664_10730006	Not Available	891	Open in IMG/M
3300025929\|Ga0207664_11977895	Not Available	506	Open in IMG/M
3300025939\|Ga0207665_10250938	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	1307	Open in IMG/M
3300025941\|Ga0207711_11716886	Not Available	571	Open in IMG/M
3300026035\|Ga0207703_10893089	All Organisms → cellular organisms → Bacteria	851	Open in IMG/M
3300026116\|Ga0207674_12307829	All Organisms → cellular organisms → Bacteria	500	Open in IMG/M
3300027824\|Ga0209040_10000028	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	84673	Open in IMG/M
3300027824\|Ga0209040_10088033	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	1781	Open in IMG/M
3300027857\|Ga0209166_10032923	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	3140	Open in IMG/M
3300027895\|Ga0209624_10644059	Not Available	701	Open in IMG/M
3300027898\|Ga0209067_10860208	Not Available	531	Open in IMG/M
3300027908\|Ga0209006_10802915	All Organisms → cellular organisms → Bacteria → Proteobacteria	763	Open in IMG/M
3300027908\|Ga0209006_11314276	All Organisms → cellular organisms → Bacteria	558	Open in IMG/M
3300027986\|Ga0209168_10197901	All Organisms → cellular organisms → Bacteria → Proteobacteria	1006	Open in IMG/M
3300031708\|Ga0310686_103887154	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	3522	Open in IMG/M
3300031708\|Ga0310686_111580337	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	996	Open in IMG/M
3300031715\|Ga0307476_11222077	Not Available	550	Open in IMG/M
3300031718\|Ga0307474_10203401	All Organisms → cellular organisms → Bacteria	1508	Open in IMG/M
3300031912\|Ga0306921_11065924	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	908	Open in IMG/M
3300032009\|Ga0318563_10792456	Not Available	508	Open in IMG/M
3300032160\|Ga0311301_10773043	All Organisms → cellular organisms → Bacteria → Proteobacteria	1328	Open in IMG/M
3300032261\|Ga0306920_101157141	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1119	Open in IMG/M
3300032261\|Ga0306920_101235529	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1078	Open in IMG/M
3300032261\|Ga0306920_102195977	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	768	Open in IMG/M
3300032261\|Ga0306920_103084417	Not Available	627	Open in IMG/M
3300032515\|Ga0348332_10025537	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1470	Open in IMG/M
3300032805\|Ga0335078_10993358	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	995	Open in IMG/M
3300032805\|Ga0335078_11299158	All Organisms → cellular organisms → Bacteria → Proteobacteria	831	Open in IMG/M
3300032828\|Ga0335080_11142630	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium 69-11	786	Open in IMG/M
3300032892\|Ga0335081_10483255	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	1564	Open in IMG/M
3300032893\|Ga0335069_11291322	Not Available	795	Open in IMG/M
3300033004\|Ga0335084_11755368	Not Available	609	Open in IMG/M
3300033134\|Ga0335073_10149627	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2958	Open in IMG/M
3300033134\|Ga0335073_11717965	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	591	Open in IMG/M
3300033289\|Ga0310914_11242452	All Organisms → cellular organisms → Bacteria	647	Open in IMG/M
3300033475\|Ga0310811_10204599	All Organisms → cellular organisms → Bacteria → Proteobacteria	2404	Open in IMG/M
3300033475\|Ga0310811_10590614	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	1120	Open in IMG/M
3300033475\|Ga0310811_10726784	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	951	Open in IMG/M
3300033486\|Ga0316624_12164289	Not Available	517	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	83.97%
Host-Associated	Host-Associated	16.03%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	74.05%
Plants	Host-Associated → Plants	16.03%
Aquatic	Environmental → Aquatic	9.92%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	73.28%
Rhizosphere	Host-Associated → Plants → Rhizosphere	10.69%
Freshwater	Environmental → Aquatic → Freshwater	5.34%
Rhizoplane	Host-Associated → Plants → Rhizoplane	5.34%
Sediment	Environmental → Aquatic → Sediment	3.05%
Thermal Springs	Environmental → Aquatic → Thermal Springs	1.53%
Plant Litter	Environmental → Terrestrial → Plant Litter	0.76%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	40.46%
Loam	Environmental → Terrestrial → Soil → Loam	25.19%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	8.40%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	7.63%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	3.82%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	3.82%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	3.05%
Soil	Host-Associated → Plants → Rhizosphere → Soil	2.29%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	1.53%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	1.53%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.53%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified	0.76%

Habitat	Taxonomy	Distribution
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	19.85%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	19.08%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	18.32%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	8.40%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	6.87%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	5.34%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	3.82%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	3.82%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	3.05%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	3.05%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	2.29%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	1.53%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	1.53%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.53%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	0.76%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified	0.76%

Habitat	Taxonomy	Distribution
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	13.74%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	12.21%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	6.87%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	5.34%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	4.58%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	4.58%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	4.58%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	3.82%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	3.82%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	3.82%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	3.05%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	3.05%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	2.29%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	2.29%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	2.29%
Soil	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil	1.53%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	1.53%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	1.53%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.53%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	1.53%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.53%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.53%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.53%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.76%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grass Soil	0.76%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.76%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost	0.76%
Plant Litter	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter	0.76%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.76%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	0.76%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.76%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.76%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.76%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.76%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.76%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.76%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	0.76%
Boreal Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil	0.76%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2189573004	Grass soil microbial communities from Rothamsted Park, UK - FG2 (Nitrogen)	Environmental	Open in IMG/M
3300001867	Texas A ecozone_OM1H0_M2 (Combined assembly for Texas A ecozone Site metagenome samples, ASSEMBLY_DATE=20130705)	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300003219	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM3	Environmental	Open in IMG/M
3300004152	Coassembly of ECP12_OM1, ECP12_OM2, ECP12_OM3	Environmental	Open in IMG/M
3300004635	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300005329	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG	Environmental	Open in IMG/M
3300005335	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG	Host-Associated	Open in IMG/M
3300005336	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005441	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG	Environmental	Open in IMG/M
3300005534	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen07_05102014_R1	Environmental	Open in IMG/M
3300005537	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1	Environmental	Open in IMG/M
3300005541	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1	Environmental	Open in IMG/M
3300005564	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG	Host-Associated	Open in IMG/M
3300005614	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2	Host-Associated	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005842	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2	Host-Associated	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006050	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2014	Environmental	Open in IMG/M
3300006102	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2013	Environmental	Open in IMG/M
3300006172	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2014	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006804	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200	Environmental	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300006893	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaG	Environmental	Open in IMG/M
3300006954	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control	Environmental	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010152	Soil microbial communities from Oklahoma, USA to study soil gas exchange rates - GP-OK-ARM metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010154	Soil microbial communities from Willow Creek, Wisconsin, USA - WC-WI-TBF metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300010880	Boreal forest soil eukaryotic communities from Alaska, USA - C5-1 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300011119	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG	Host-Associated	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012984	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MG	Environmental	Open in IMG/M
3300013105	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG	Host-Associated	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300014497	Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG	Host-Associated	Open in IMG/M
3300014501	Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300014968	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG	Host-Associated	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300020070	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-1 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300020582	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O	Environmental	Open in IMG/M
3300021181	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O	Environmental	Open in IMG/M
3300021401	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O	Environmental	Open in IMG/M
3300021403	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O	Environmental	Open in IMG/M
3300021404	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-O	Environmental	Open in IMG/M
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental	Open in IMG/M
3300021406	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O	Environmental	Open in IMG/M
3300021475	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-O	Environmental	Open in IMG/M
3300021477	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-O	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300022530	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-30-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300024249	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK17	Environmental	Open in IMG/M
3300025898	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025906	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025917	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025929	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025939	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025941	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026035	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026116	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027824	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM3 (SPAdes)	Environmental	Open in IMG/M
3300027857	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027895	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O1 (SPAdes)	Environmental	Open in IMG/M
3300027898	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2013 (SPAdes)	Environmental	Open in IMG/M
3300027908	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2 (SPAdes)	Environmental	Open in IMG/M
3300027986	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen07_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031715	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05	Environmental	Open in IMG/M
3300031718	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300032009	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f19	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300032515	FICUS49499 Metatranscriptome Czech Republic combined assembly (additional data)	Environmental	Open in IMG/M
3300032805	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2	Environmental	Open in IMG/M
3300032828	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.4	Environmental	Open in IMG/M
3300032892	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5	Environmental	Open in IMG/M
3300032893	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.1	Environmental	Open in IMG/M
3300033004	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.4	Environmental	Open in IMG/M
3300033134	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.2	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M
3300033475	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YC	Environmental	Open in IMG/M
3300033486	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_N3_C1_D5_A	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
FG2_06858350	2189573004	Grass Soil	MAIAVRQPHRWWYRQFWYAEHSPRDTLVDRALFFAIVALSLVVGSMLLVRHYAVPHATGKSPVAEASRL
JGI12627J18819_102303662	3300001867	Forest Soil	MLIAPQQPHRSWYNHFWYAERSPRDTLTDRALLFGVVALGLLVAGMSLVHRNTIPSTERASITIEGD*
JGIcombinedJ26739_1004116382	3300002245	Forest Soil	MAIAPLQPHKSWYRHFWYAQRSPRDTLADRALLFAIVALSLIVGGIYLIRYNVTSRTANPLPITEVAR*
JGI26341J46601_100233972	3300003219	Bog Forest Soil	MAIALRQPHRSWYRHFWYAERSPGDTLTDRTLLFAIVALSLIVGGMLLVRHHAEPRGTGQFAVAEPAR*
Ga0062386_1012358041	3300004152	Bog Forest Soil	MAPLQPHASWYRHFWYAERSPRDTLTDRTLIFAIVWLGLLAGGMLLVRHNAVPRTAGQF
Ga0062388_1005889162	3300004635	Bog Forest Soil	MSGEMAIAPLQPHKSWYRHFWYAERSPRDTLVDRTLLFAIVALSLVVGGMLLVHHHAVQHVGGI*
Ga0070683_1019892462	3300005329	Corn Rhizosphere	MAIAPLQPHRSWYRHFWYADRSPRDTLADRSLVFAIVALSLLAGGLLMVRNHTVPIASGQATVSETVR*
Ga0070666_103491961	3300005335	Switchgrass Rhizosphere	MAIAPQQPHRSWYRHFWYAERSPRDTLADRSLFFAIVTLSLVVGGMLLVRHHAVPRGESPGMIEAAR*
Ga0070680_1002567123	3300005336	Corn Rhizosphere	MAIAPLQPHKSWYRHFWYAQRSPRDTLADRTLLFAIVALSLVVGGTFLVRHNASPPAAAPSPVVEIAR*
Ga0070714_1000096436	3300005435	Agricultural Soil	MAIAVRQPHKSWYQQFWYAERSARDRLTDRTLLFAIVALSLTVGGIQLVRHYAKPQAARPFPITEVAGR*
Ga0070714_1008477631	3300005435	Agricultural Soil	MAIAPLQPHRSWYRHFWYAERSPRDTLADRSLLFAIVALSLLAGGLLLARNHTVPFANGQLPESETVR*
Ga0070714_1009464692	3300005435	Agricultural Soil	MAIAPLQPHKSWYRHFWYARRSPRDTLADRTLIFAIVALSLIVGGIYLVRHHAGTRTAIPLPAAEAAR*
Ga0070713_1000466704	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MAIAVRQPHKSWYQQFWYAERSARDRLTDRTLLFAIVALSLTVGGIQLVRHYAKPHAARPFPITEVAGR*
Ga0070713_1001226762	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MAIAPLQPHRSWYRHFWYAERSPRDTLADRSLLFAIVALSLLAGALLLARNHTLPIANGQLPESETVR*
Ga0070713_1018021422	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MAIALRQPHKSWYRHFWYAQRSPSDTLADRALLFAIVALSLVVGGIYLVHHSATPRAAAPLPAVEATR*
Ga0070713_1023006221	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MAIAPLQPHRSWYRHFWYAERSPRDTLVDRSILFAIVALSLIAGGLIMARNQAATIAAERLAGSEAGALAPR*
Ga0070710_101993612	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	EPNEGQMAIAVRQPHKSWYQQFWYAERSARDRLTDRTLLFAIVALSLTVGGIQLVRHYAKPQAARPFPITEVAGR*
Ga0070711_1004751952	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	MAIAVRQPHKSWYQQFWYAERSARDRLTDRTLLFAIVALSLTVGGIQLVRHY
Ga0070700_1009773321	3300005441	Corn, Switchgrass And Miscanthus Rhizosphere	MAIAPIQPPRSWYRQFWYAERSPRDTLADRSLLFAIVALSLLAGGLVMARNHSVPIDNGQSPVSEIVR*
Ga0070735_100475011	3300005534	Surface Soil	MAIAPQQPHPSWYRQFWYAERSPRDTLVDRALIFAIVALGLLASGVVMVQHHAVPPTERSLASDRAVL*
Ga0070735_102641152	3300005534	Surface Soil	MAIAPLQPHKSWYRHFWYAQRSPRDTLVDRALLFAIVALSLIVGGIYLIRHHATPHTANPLPTTEFAR*
Ga0070730_100194035	3300005537	Surface Soil	MAIAPQQPHPSWYRQFWYAKRSPRDTLVDRALIFAIVALGLLASGVVMVQHHAVPPSERGLANDRAAL*
Ga0070733_111346192	3300005541	Surface Soil	MAIAPQQPHPSWYRQFWYAKRSPRDTLVDRALIFAIVALGLLASGVVMVQHHA
Ga0070664_1016304641	3300005564	Corn Rhizosphere	MAIAPQQPHRSWYRHFWYAEKSPRDTLADRTLLFAIVALLLVVSGMFLVRHHSVPPGA
Ga0068856_1003687531	3300005614	Corn Rhizosphere	MAIAVRQPHKSWYQQFWYAERSARDRLTDRTLLFAIVALSLTVGGIQLVRHYAKP
Ga0068856_1026572671	3300005614	Corn Rhizosphere	MAIAPQQPHRSWYRHFWYAEKSPRDTLADRTLLFAIVALLLVVSGMFLVRHHSVPPGADPAAVTNQVF*
Ga0066903_1003427512	3300005764	Tropical Forest Soil	MAIAPLQPPKSWYRHFWYAERSPRDTLADRSLVFAIVALGLIAGGMLLVRHNAAPPAAPTEIPSPA*
Ga0066903_1052054112	3300005764	Tropical Forest Soil	MAIAPLQPHKSWYRHFWYAQRSPRDTLLDRTLIFAIVALSLVAAGLVWIPRDAARHTPTRTPATEAAR*
Ga0068858_1020996022	3300005842	Switchgrass Rhizosphere	MPIAPRRPHRSWYRQYWYADRSPRDTLVDRTLIFAIVALTLLAGSMLLVRHGATPRAANPLAAEVAR*
Ga0070717_112348502	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MAIALRQPHKSWYRHFWYAQRSPSDTLADRALLFAIVALSLVVGGIYLVRHSATPRAAAPLPAVEATR*
Ga0075028_1007334592	3300006050	Watersheds	MPIAPRQPHKSWYRHFWYAEHSPRNTLADRALIFAIVALSLVVGGMFLTRHNATPRMATPLPAADTAR*
Ga0075015_1006092052	3300006102	Watersheds	MAIAPRQPHKSWYRHFWYAEHSPRNTLADRALIFAIVALSLVVGGMFLTRHNATPRMATPLPAADTAR*
Ga0075018_107698981	3300006172	Watersheds	MSGEMPIAPQPPHKSWYRHFWYAERSPRDTLIDRTLLFAIVALSLVVGGMLLVHRH
Ga0070712_1002509792	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MAIAVRQPHKSWYQQFWYAERSARDRLTDRTLLFAIVALLLTVGGIQLVRHYAKPQAARPFPITEVAGR*
Ga0070712_1008658481	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	HRSWYRHFWYAERSPRDTLVDRSLLFAIVALSLIAGGLIMARNQAATIAAERLAGSEAGALAPR*
Ga0079222_118734821	3300006755	Agricultural Soil	MAIAPLQPHRSWYRHFWYADRSPRDTLADRSLVFAIVALSLLAGGMLMVRNHPLPTTSGEVPAPEAVR*
Ga0079221_116256292	3300006804	Agricultural Soil	MAIAPLQPHRSWYRHFWYAERSPRDTLVDRSLLFAIVALSLLAGGLLMARNHAMPTGNGQFPGSEAARQHPW*
Ga0079220_112320681	3300006806	Agricultural Soil	HPSWYRRFWYAERSPRDSLTDRALIFTIIALVLIAGGMHLVRHHAIAPPERGSVSARAAG
Ga0073928_105553682	3300006893	Iron-Sulfur Acid Spring	MAIALRQPHRSWYRHFWYAEHSPRDTLVDRTLFFAIVALSLVVGSMLLVRHSAVPHASGKFPVADASRR*
Ga0073928_108251391	3300006893	Iron-Sulfur Acid Spring	HKSWYRHFWYARRSPRDTLADRTLIFAIVALSLIVGGIYLVRHHAGTRTAIPLPAAAAAR
Ga0079219_110013731	3300006954	Agricultural Soil	MAIAPLQPHRSWYRHFWYAERSPRDTLVDRSLLFAIVALSLLAGGLLLARNHAMPIANGQFPGSEAARQSPW*
Ga0105248_124485612	3300009177	Switchgrass Rhizosphere	MAIAPLQPHRSWYRHFWYAERSPRDTLVDRSLLFAIVALSLLAGGLLMARNHAMPTGNGQFPGPEAARQCPW*
Ga0126380_122362292	3300010043	Tropical Forest Soil	MPIAPQQPHPSWYRHFWYAERSPRDTLLDRALIFAIVALGLLAGGVMAVNHNAVPPSERGITSDQAAR*
Ga0126373_107442482	3300010048	Tropical Forest Soil	MAIAPLQPHSSWYRHFWYAERSPRDTLTDRTLIFAIVALGLVVGGTLLVRHHAGPHAVALIEAER*
Ga0126373_129833541	3300010048	Tropical Forest Soil	MAIAPLQPHKSWYRHFWYARRSPRDTLLDRTLIFAIVALSLVAAGLVWIPRDAARHTPTRTPATEAAR*
Ga0126318_102083731	3300010152	Soil	SWYRHFWYAERSPRDTLVDRSLLFAIVALSLIAGGLVMARDQAATIGTERLAGSEARALAPR*
Ga0127503_101640282	3300010154	Soil	MPIAPRQAHRSWYRHFWYAERSPRDTLIDRTLIFAIVALSLVAGGMLLVRYHAVPRGASPPGVAEAAR*
Ga0126378_100445884	3300010361	Tropical Forest Soil	MAIALRQPHRSWYRHFWYAERSPGDTLTDRTLLFAIVALSMIVGGMLLVHHHAEPRGTGQFAVAEPAR*
Ga0105239_104727982	3300010375	Corn Rhizosphere	MAIAPLQPHRSWYRHFWYAERSPRDTLVDRSLLFAIVALSLLAGGLLMARNHAVPIAGGQFLGSEAVR*
Ga0105239_128557212	3300010375	Corn Rhizosphere	QPHKSWYQQFWYAERSARDRLTDRTLLFAIVALLLIIGGIQLVRHYRKPHAVGPFPMTEAAGR*
Ga0136449_1009203353	3300010379	Peatlands Soil	MAPLQPHASWYRHFWYAERSPRDTLADRTLIFAIVALGLLAGGMLLVRHNAVPRTAGQFPVTEAAR*
Ga0134127_128708002	3300010399	Terrestrial Soil	MAIAPQQPHRSWYRHFWYAQRSPRDTLADRTLLFAIVALSLVVGGTFLVRHNASPPAAAPSPVVEIAR*
Ga0126350_113032321	3300010880	Boreal Forest Soil	MAIAPLQPHRSWYRHFWYAERSPRDTLTDRTLIFAIVALGLVAGGMLLVRHHAAPPPAALVEAER*
Ga0105246_120084801	3300011119	Miscanthus Rhizosphere	MAIAPLQPHRSWYRHFWYAERSPRDTLVDRSLLFAIVALSLLAGGLLMARNHAMPTGNGQFPGPEAARQYPW*
Ga0150985_1070725752	3300012212	Avena Fatua Rhizosphere	GEMAIAPLQPHKSWYRHFWYAQRSPRDTLMDRTLIFAIVALALVAGGMLWIPHGAGTQAAHQLPAAQDMR*
Ga0150984_1150436614	3300012469	Avena Fatua Rhizosphere	MPADQEEAMAIAPLQPHRSWYRHFWYADRSPRDTLADRSLVFAIVALSLLAGGLLMVRNHTVPIASGQATVSETVR*
Ga0164309_116238162	3300012984	Soil	MAIAVRQPHKSWYQQFWYAERSARDRLTDRTLLFAIVALSLTVGGIQLVRHYAKPHAAR
Ga0157369_114391472	3300013105	Corn Rhizosphere	MAIALRQPHKSWYRHFWYAQRSPSDTLADRALLFAIVALSLVVGGIYLVHHSATPRAAAPLPAVEAAR*
Ga0157378_117144312	3300013297	Miscanthus Rhizosphere	MAIAPLQPHKSWYRHFWYAERSPRDTLTDRALLFAIVALSLVAGGSLLVRQHAAPPSTGSVAAAQAAR*
Ga0182008_100537813	3300014497	Rhizosphere	MAIAPLQPHRSWYRHFWYAERSPRDTLVDRSLLFAIAALSLIAGGLVMARDQAATIGAERLAGSEARALAPR*
Ga0182008_101791302	3300014497	Rhizosphere	MAIAPLQPPRSWYRHFWYAERSPRDTLADRSLLFAIVALSLLAGGLVMARNHSVPIDNGKFPMSEIVR*
Ga0182008_103180102	3300014497	Rhizosphere	SWYRHFWYAERSPRDTLVDRSLLFAIVALSLLAGGLLMARNHAMPTGNGQFPGPEAARQYPW*
Ga0182024_118222612	3300014501	Permafrost	MAIAPLQPHKSWYRHFWYAQRSPRDTLADRALLFAIVALSLIVGGIYLIRHNTITHTANPLPTTEFAR*
Ga0157379_112073781	3300014968	Switchgrass Rhizosphere	MATYQEEAMAIAPIQPPRSWYRQFWYAERSPRDTLADRSLLFAIVALSLLAGGLVMARNHSVPIDNGQSPV
Ga0132258_131915092	3300015371	Arabidopsis Rhizosphere	MAIAPQQPHRSWYRNFWYAEKSPRDTLTDRTLVFAIVALSLVVGGMFLVRHHAVPPGTNSGPVANEVF*
Ga0182035_117104721	3300016341	Soil	MAIALRQPHGSWYRHFWYAERSPGDTLTDRTLLFAIVALSMIVGGMLLVRHHAEPRGAGQFAVAAPAH
Ga0206356_105965741	3300020070	Corn, Switchgrass And Miscanthus Rhizosphere	MAIAPLQPHRSWYRHFWYAERSPRDTLVDRSLLFAIVALSLLAGGLLMARNHAMPTGNGQFPGPEAARQYPW
Ga0210395_100286293	3300020582	Soil	MAIAPLQPHKSWYRHFWYAERSPRDTLVDRTLLFAIVALSLVVGGMLLVHHHAVQHVGGI
Ga0210395_102901362	3300020582	Soil	MAIAPLQPHKSWYRHFWYARRSPRDTLADRTLIFAIVALSLIVGGIYLVRHHAGTRTAIPLPAAEAAR
Ga0210388_108195512	3300021181	Soil	PHKSWYRHFWYAERSPRDTLVDRTLLFAIVALSLVVGGMLLVHHHAVQHVGGI
Ga0210393_100630424	3300021401	Soil	MAIAPLQPHKSWYRHFWYAQRSPRDTLVDRTLLFAIVALSLVVSGMLLVHHHTAAHVAGRTIAFGAGSAE
Ga0210397_101987192	3300021403	Soil	MAIAPLQPHRSWYRHFWYAERSPRDTLTDRTLIFAIVALGLVAGGMLLVRHHATPHAIALVEAAR
Ga0210397_115361472	3300021403	Soil	MAIAPQQPHPSWYRHFWYAERSPRDTLVDRALLFAIVALGLLAGGMLLVPHDAVPPGRSLASDQAAR
Ga0210389_107282332	3300021404	Soil	MLIAPQQPHRSWYNHFWYAERSPRDTLTDRALLFGVVALGLLVAGMSLVHRNTIPSTERASITIEGD
Ga0210387_106996562	3300021405	Soil	MAIAPLQPHRSWYRHFWYAERSPRDTLTDRTLIFAIVALGLVAGGMLLVRHHAAPHAIALVEAAR
Ga0210387_112966291	3300021405	Soil	MAIAPLQPHKSWYRHFWYARRSPRDTLADRTLIFAIVALSLVVGGIYLVRHHAGTRTAIPLPAAEAAR
Ga0210386_116526161	3300021406	Soil	MSGEMAIAPLQPHKSWYRHFWYAERSPRDTLVDRTLLFAIVALSLVVGGMLLVHHHAVQHVGGI
Ga0210392_101225102	3300021475	Soil	MAIAPLQPHRSWYRHFWYAERSPRDTLTDRTLIFAIVALGLVAGGMLLVRHHAAPPAAALVEAER
Ga0210398_109935232	3300021477	Soil	MAIAPLQPHKSWYRHFWYAQRSPRDTLADRALLFAIVALSLIVGGIYLIRYNVTSRTANPLPITEVAR
Ga0126371_100481615	3300021560	Tropical Forest Soil	MAIAPLQPHKSWYRHFWYASRSPRDTLADRTLLFAIVALALIVSGMLLVRHHAAPPQPEHAAIAPTH
Ga0126371_105416011	3300021560	Tropical Forest Soil	MAIAPLQPHKSWYRHFWYAQRSPRDTLLDRTLIFAIVALSLVAAGLVWIPRDAARHTPTRTPATEAAR
Ga0126371_127168272	3300021560	Tropical Forest Soil	MAIAPLQPHKSWYRHFWYASRSPRDTLLDRSLLFAIVALGLVVGGTLLVRHYAIPQQPEHATIAPTH
Ga0242658_11488982	3300022530	Soil	MAIAPLQPHRSWYRHFWYAERSPRDTLTDRTLIFAIVALALVAGGMLLVRHH
Ga0247676_10070763	3300024249	Soil	TANEGGMAIAPLQPHRSWYRHFWYAERSPRDTLTDRTLIFAIVALGLIASGMLLVRHHAAPPPAALVEAVR
Ga0207692_104023602	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	MAIAPQQPHRSWYRHFWYAERSPRDTLADRSLFFAIVTLSLVVGGMLLVRHHAVPRGESPGMIEAAR
Ga0207699_113385562	3300025906	Corn, Switchgrass And Miscanthus Rhizosphere	MAIAPLQPHRSWYRHFWYAERSPRDTLADRSLLFAIVALSLLAGALLLARNHTLPIANGQLPESETVR
Ga0207693_103033914	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	PTYQEEAMAIAPLQPHRSWYRHFWYAERSPRDTLVDRSILFAIVALSLIAGGLIMARNQAATIAAERLAGSEAGALAPR
Ga0207663_103390963	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	MAIAPQQPHRSWYRHFWYAERSPRDTLADRSLFFAIVTLSLVVGGMLLVRH
Ga0207660_102115663	3300025917	Corn Rhizosphere	MAIAPLQPHKSWYRHFWYAQRSPRDTLADRTLLFAIVALSLVVGGTFLVRHNASPPAAAPSPVVEIAR
Ga0207700_102649241	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	YRHFWYARRSPRDTLADRTLIFAIVALSLIVGGIYLVRHHAGTRTAIPLPAAEAAR
Ga0207700_103417701	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	IRYWPPTYQEEAMAIAPLQPHRSWYRHFWYAERSPRDTLVDRSLLFAIVALSLIAGGLMMARNQAATIAAERLAGSEAGALAPR
Ga0207700_115653282	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	MAIAVRQPHRSWYRQFWYAEHSPRDTLIDRALFFAIVALSLVVGSMLLVRHYAVPHAGKSPVAEASRL
Ga0207664_107300062	3300025929	Agricultural Soil	MAIAPLQPHRSWYRHFWYAERSPRDTLADRSLLFAIVALSLLAGGLLLARNHTVPFANGQLPESETVR
Ga0207664_119778952	3300025929	Agricultural Soil	MAIAPQQPHRSWYRHFWYAERSPRDTLADRSLFFAIVTLSLVVGGMLLVRHHAVPRGESPGMIEAA
Ga0207665_102509381	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	MAIAVRQPHKSWYQQFWYAERSARDRLTDRTLLFAIVALSLTVGGIQLVRHYAKPHAA
Ga0207711_117168862	3300025941	Switchgrass Rhizosphere	MGHGMPIAPRRPHRSWYRHFWYAERSPRDTLVDRSLLFAIVALSLLAGGLLMARNHAMPTGNGQFPGPEAARQCPW
Ga0207703_108930892	3300026035	Switchgrass Rhizosphere	MPIAPRRPHRSWYRQYWYADRSPRDTLVDRTLIFAIVALTLLAGGMLLVRHGATPRAANPLAAEVAR
Ga0207674_123078292	3300026116	Corn Rhizosphere	MAIAPLQPHRSWYRHFWYAERSPRDTLVDRSLLFAIVALSLLAGGLLMARNHAMPTGNGQ
Ga0209040_1000002811	3300027824	Bog Forest Soil	MAIALRQPHRSWYRHFWYAERSPGDTLTDRTLLFAIVALSLIVGGMLLVRHHAEPRGTGQFAVAEPAR
Ga0209040_100880333	3300027824	Bog Forest Soil	MQHNEREMAIAPLQPHRSWYRHFWYAERSPRDTLTDRTLLFAIVALFLIIGGMLLVRHYAVPRTAGPLPVAEAGR
Ga0209166_100329235	3300027857	Surface Soil	MAIAPQQPHPSWYRQFWYAKRSPRDTLVDRALIFAIVALGLLASGVVMVQHHAVPPSERGLANDRAAL
Ga0209624_106440592	3300027895	Forest Soil	HRSWYRHFWYAERSPRDTLTDRTLIFAIVALGLVAGGMLLVRHHAAPHAIALVEAAR
Ga0209067_108602082	3300027898	Watersheds	MAIAPLQPHRSWYQHFWYAERSPRDTLVDRTLLFAIVALSLVVGGMLLVHHHTSRTGLSHLALDRLSE
Ga0209006_108029151	3300027908	Forest Soil	HPSWYRHFWYAERSPRDTLVDRALLFAIVALGLLAGGMLLVPHDAVPPGRSLASDQAAR
Ga0209006_113142762	3300027908	Forest Soil	APLQPHKSWYRHFWYARRSPRDTLADRTLIFAIVALSLIVGGIYLVRHHAGTRTAIPLPAAEAAR
Ga0209168_101979012	3300027986	Surface Soil	MAIAPLQPHKSWYRHFWYAQRSPRDTLVDRALLFAIVALSLIVGGIYLIRHHATPHTANPLPTTEFAR
Ga0310686_1038871542	3300031708	Soil	MAIAPLQPHKSWYRHFWYAQRSPRDTLADRALLFAIVALSLTVGGIYLIRYNVTSRTANQLAITEVAR
Ga0310686_1115803372	3300031708	Soil	MAIAPLQPHKSWYRHFWYAERSPRDTRADRALLFAIVALSLIVGGIYLIRYNVTSRTANPLPITEVAR
Ga0307476_112220772	3300031715	Hardwood Forest Soil	MAIAPRQPHKSWYRHFWYAERSPRDTLVDRTLLFMIVALSLIVGGIYLIRPNTTPHAATPLPATEVAR
Ga0307474_102034012	3300031718	Hardwood Forest Soil	MAIAPLQPHKSWYRHFWYARRSPRDTLADRSLIFAIVALSLIVGGIYLVRHHAGTRTAIPLPAAEAAR
Ga0306921_110659241	3300031912	Soil	MAIALRQPHRSWYRHFWYAERSPGDTLTDRTLLFAIVALSMIVGGMLLVHHHAEPRGTG
Ga0318563_107924561	3300032009	Soil	MAIAPLQPHRSWYRHFWYAERSPRDTLTDRTLLFAIVALSLVVGGILLVRHYAAPRAAGQLPVAQAAR
Ga0311301_107730431	3300032160	Peatlands Soil	MAPLQPHASWYRHFWYAERSPRDTLADRTLIFAIVALGLLAGGMLLVRHNAVPRTAGQFPVTEAAR
Ga0306920_1011571412	3300032261	Soil	MAIALRQPHRSWYRHFWYAERSPGDTLTDRTLLFAIVALSMIVGGMLLVHHHAEPRGTGQFAVAEPAR
Ga0306920_1012355292	3300032261	Soil	MAIAPLQPHKSWYRHFWYARRSPRDTLLDRTLIFAIVALSLVAAGLVWIPRDTARHAPSRAPAAEAAR
Ga0306920_1021959772	3300032261	Soil	MAIALREPHKSWYRQFWYAERSPRDTLLDRSLIFAIVALSLVAAGLVWI
Ga0306920_1030844171	3300032261	Soil	MAIAPLQPHQSWYRHFWYAERSPRDTLTDRTLLFAIVALSLVVGGILLVGHYAAPRAMGQLPVVQAAR
Ga0348332_100255371	3300032515	Plant Litter	RGLMAIAPLQPHKSWYRHFWYAQRSPRDTLADRALLFAIVALSLTVGGIYLIRYNVTSRTANPLAITEVAR
Ga0335078_109933582	3300032805	Soil	MAIAPQQPHKSWYRHFWYAERSPRDTLADRTLLFAIVALSLIAGGMLLLRYHG
Ga0335078_112991581	3300032805	Soil	MAIAPLQPHKSWYRHFWYAERSPRDTLTDRTLLFAVVALSLVVGGMWLVHHHASPLGTIAEVAR
Ga0335080_111426301	3300032828	Soil	MAIALRQPHKSWYRHFWYAQHSPHDTLIDRTLLFSIVALSLVVGGIYLIRHNAA
Ga0335081_104832551	3300032892	Soil	PQQPHKSWYRHFWYAERSPRDTLADRTLLFAIVALSLIAGGMLLLRYHG
Ga0335069_112913222	3300032893	Soil	LAAIRNEGDMPIAPRQPHRSWYRHFWYAERSPRDTLTDRTLVFAIVALSLVVGGTALVRHYVAPRHAAGPVITDPL
Ga0335084_117553681	3300033004	Soil	MPIAPRQPHRSWYRHFWYAERSPRDTLTDRTLVFAIVALSLVVGGTALV
Ga0335073_101496274	3300033134	Soil	MSIAPQQPHRSWYRHFWYAERSPRDTLTDRALLFGIVALGLLVAGMLLVHHNAIPRSERDFTTAQAAR
Ga0335073_117179651	3300033134	Soil	MLIAPQQPHRSWYNHFWYAERSPRDTLTDRALLFGVVALGLIVGGILLVHHNSIPHTERDSM
Ga0310914_112424522	3300033289	Soil	NEGEMAIALRQPHRSWYRHFWYAERSPGDTLTDRTLLFAIVALSMIVGGMLLVHHHAEPRGTGQFAVAEPAR
Ga0310811_102045993	3300033475	Soil	MTIAPRQPHPSWYRHFWYAERSPRDSLIDRALIFAVVALALMAGGMFLVQHHAIAPTERGLMSAQAAG
Ga0310811_105906142	3300033475	Soil	MAIAPMQPHRSWYRHFWYAERSPRDTLTDRTLIFAIVALGLVAGGMLLVRHHAAPPPAALVEAAR
Ga0310811_107267841	3300033475	Soil	MAIAPLQPHRSWYRHFWYAERSPRDTLTDRTLIFAIVALGLVAGGMLLVRHHAAP
Ga0316624_121642891	3300033486	Soil	YRHFWYAKRSPRDTLTDRALLFAIVALSLVVGGTYLIRHNAAPRAASSASVTEVAR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F062125

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences