Metagenome / Metatranscriptome Family F062099

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F062099
Family Type	Metagenome / Metatranscriptome
Number of Sequences	131
Average Sequence Length	100 residues
Representative Sequence	MANNLGSEHQSRPPIRLLASVLLLGTLLAWWGTRDHRRLFGESLREPVAAGGIVLPQVTQEESALLDRGSQISQRQCAGCHEMATRSS
Number of Associated Samples	100
Number of Associated Scaffolds	131

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	93.08 %
% of genes near scaffold ends (potentially truncated)	95.42 %
% of genes from short scaffolds (< 2000 bps)	88.55 %
Associated GOLD sequencing projects	89
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.28

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (99.237 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (36.641 % of family members)
Environment Ontology (ENVO)	Unclassified (33.588 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (46.565 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 41.38% β-sheet: 0.00% Coil/Unstructured: 58.62%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.28
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.28
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 131 Family Scaffolds
PF03404	Mo-co_dimer	29.01
PF00174	Oxidored_molyb	1.53
PF00072	Response_reg	0.76
PF02416	TatA_B_E	0.76
PF13563	2_5_RNA_ligase2	0.76
PF03713	DUF305	0.76
PF13590	DUF4136	0.76
PF10282	Lactonase	0.76

COG ID	Name	Functional Category	% Frequency in 131 Family Scaffolds
COG2041	Molybdopterin-dependent catalytic subunit of periplasmic DMSO/TMAO and protein-methionine-sulfoxide reductases	Energy production and conversion [C]	1.53
COG3915	Uncharacterized conserved protein	Function unknown [S]	1.53
COG1826	Twin-arginine protein secretion pathway components TatA and TatB	Intracellular trafficking, secretion, and vesicular transport [U]	0.76
COG3544	Uncharacterized conserved protein, DUF305 family	Function unknown [S]	0.76

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	99.24 %
Unclassified	root	N/A	0.76 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	99.24 %
Unclassified	root	N/A	0.76 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	99.24 %
Unclassified	root	N/A	0.76 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	64.89 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	29.01 %
Unclassified	root	N/A	0.76 %

Name	Rank	Taxonomy	Distribution
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	61.83 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	27.48 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	1.53 %
Unclassified	root	N/A	0.76 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	61.83 %
Pseudomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales	25.95 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	1.53 %
Unclassified	root	N/A	0.76 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	61.83 %
Pseudomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae	25.95 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1.53 %
Unclassified	root	N/A	0.76 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	61.83 %
Pseudomonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas	25.95 %
Candidatus Koribacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	0.76 %
Unclassified	root	N/A	0.76 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	61.83 %
Pseudomonas syringae group	species group	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → Pseudomonas syringae group	16.03 %
Pseudomonas fluorescens group	species group	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → Pseudomonas fluorescens group	1.53 %
Candidatus Koribacter versatilis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	0.76 %
Unclassified	root	N/A	0.76 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	61.83 %
Pseudomonas syringae group genomosp. 1	species subgroup	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → Pseudomonas syringae group → Pseudomonas syringae group genomosp. 1	16.03 %
Pseudomonas fluorescens	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → Pseudomonas fluorescens group → Pseudomonas fluorescens	1.53 %
Candidatus Koribacter versatilis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	0.76 %
Unclassified	root	N/A	0.76 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	61.83 %
Pseudomonas syringae	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → Pseudomonas syringae group → Pseudomonas syringae group genomosp. 1 → Pseudomonas syringae	16.03 %
Pseudomonas fluorescens	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → Pseudomonas fluorescens group → Pseudomonas fluorescens	1.53 %
Candidatus Koribacter versatilis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	0.76 %
Unclassified	root	N/A	0.76 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300002245\|JGIcombinedJ26739_101758362	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	520	Open in IMG/M
3300002907\|JGI25613J43889_10001614	All Organisms → cellular organisms → Bacteria → Acidobacteria	5863	Open in IMG/M
3300002911\|JGI25390J43892_10091442	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	682	Open in IMG/M
3300005435\|Ga0070714_101214295	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	736	Open in IMG/M
3300005445\|Ga0070708_100607538	All Organisms → cellular organisms → Bacteria	1031	Open in IMG/M
3300005454\|Ga0066687_10830010	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	550	Open in IMG/M
3300005537\|Ga0070730_10314675	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → Pseudomonas fluorescens group → Pseudomonas fluorescens	1023	Open in IMG/M
3300005542\|Ga0070732_10096721	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas	1738	Open in IMG/M
3300005542\|Ga0070732_10675051	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	629	Open in IMG/M
3300005546\|Ga0070696_101904200	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	515	Open in IMG/M
3300005561\|Ga0066699_10827354	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	650	Open in IMG/M
3300005575\|Ga0066702_10512984	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	728	Open in IMG/M
3300005586\|Ga0066691_10257504	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas	1025	Open in IMG/M
3300005602\|Ga0070762_10473131	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas	818	Open in IMG/M
3300006028\|Ga0070717_10992226	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	765	Open in IMG/M
3300006028\|Ga0070717_11111488	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	720	Open in IMG/M
3300006028\|Ga0070717_11289698	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	664	Open in IMG/M
3300006052\|Ga0075029_100543422	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → Pseudomonas fluorescens group → Pseudomonas fluorescens	771	Open in IMG/M
3300006173\|Ga0070716_100790372	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	734	Open in IMG/M
3300006175\|Ga0070712_100161858	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas	1729	Open in IMG/M
3300006175\|Ga0070712_100934840	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	749	Open in IMG/M
3300006854\|Ga0075425_102757529	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	541	Open in IMG/M
3300007258\|Ga0099793_10597556	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	553	Open in IMG/M
3300009012\|Ga0066710_104784738	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	506	Open in IMG/M
3300009038\|Ga0099829_10788979	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	789	Open in IMG/M
3300009088\|Ga0099830_10010635	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	5601	Open in IMG/M
3300009089\|Ga0099828_11637802	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	566	Open in IMG/M
3300009143\|Ga0099792_10262127	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → Pseudomonas syringae group → Pseudomonas syringae group genomosp. 1 → Pseudomonas syringae	1011	Open in IMG/M
3300009143\|Ga0099792_10434200	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	810	Open in IMG/M
3300011269\|Ga0137392_10086018	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2450	Open in IMG/M
3300011269\|Ga0137392_10171342	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → Pseudomonas syringae group → Pseudomonas syringae group genomosp. 1 → Pseudomonas syringae	1763	Open in IMG/M
3300011269\|Ga0137392_11019953	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	680	Open in IMG/M
3300011270\|Ga0137391_10939160	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	706	Open in IMG/M
3300011271\|Ga0137393_10338606	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1284	Open in IMG/M
3300012189\|Ga0137388_10375309	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → Pseudomonas syringae group → Pseudomonas syringae group genomosp. 1 → Pseudomonas syringae	1314	Open in IMG/M
3300012189\|Ga0137388_11286635	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	670	Open in IMG/M
3300012200\|Ga0137382_11126593	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	560	Open in IMG/M
3300012203\|Ga0137399_10395758	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → Pseudomonas syringae group → Pseudomonas syringae group genomosp. 1 → Pseudomonas syringae	1152	Open in IMG/M
3300012203\|Ga0137399_11188296	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	642	Open in IMG/M
3300012207\|Ga0137381_10437137	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → Pseudomonas syringae group → Pseudomonas syringae group genomosp. 1 → Pseudomonas syringae	1142	Open in IMG/M
3300012362\|Ga0137361_10281188	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → Pseudomonas syringae group → Pseudomonas syringae group genomosp. 1 → Pseudomonas syringae	1521	Open in IMG/M
3300012582\|Ga0137358_10221464	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → Pseudomonas syringae group → Pseudomonas syringae group genomosp. 1 → Pseudomonas syringae	1290	Open in IMG/M
3300012683\|Ga0137398_10241949	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → Pseudomonas syringae group → Pseudomonas syringae group genomosp. 1 → Pseudomonas syringae	1200	Open in IMG/M
3300012685\|Ga0137397_10637307	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	792	Open in IMG/M
3300012917\|Ga0137395_10423869	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas	954	Open in IMG/M
3300012917\|Ga0137395_11303294	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	501	Open in IMG/M
3300012918\|Ga0137396_10578097	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	831	Open in IMG/M
3300012918\|Ga0137396_10805063	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	691	Open in IMG/M
3300012923\|Ga0137359_10008390	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	8568	Open in IMG/M
3300012923\|Ga0137359_10968084	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	731	Open in IMG/M
3300012924\|Ga0137413_10148553	All Organisms → cellular organisms → Bacteria	1528	Open in IMG/M
3300012925\|Ga0137419_10951773	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	709	Open in IMG/M
3300012927\|Ga0137416_10995371	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	749	Open in IMG/M
3300012927\|Ga0137416_11678054	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	579	Open in IMG/M
3300012929\|Ga0137404_10669794	All Organisms → cellular organisms → Bacteria	937	Open in IMG/M
3300012929\|Ga0137404_10685069	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	926	Open in IMG/M
3300012929\|Ga0137404_11455611	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	633	Open in IMG/M
3300012930\|Ga0137407_10607967	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1026	Open in IMG/M
3300012944\|Ga0137410_10348455	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → Pseudomonas syringae group → Pseudomonas syringae group genomosp. 1 → Pseudomonas syringae	1183	Open in IMG/M
3300015052\|Ga0137411_1037990	All Organisms → cellular organisms → Bacteria → Proteobacteria	4021	Open in IMG/M
3300015241\|Ga0137418_11255233	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	518	Open in IMG/M
3300015245\|Ga0137409_10200780	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → Pseudomonas syringae group → Pseudomonas syringae group genomosp. 1 → Pseudomonas syringae	1796	Open in IMG/M
3300018431\|Ga0066655_10132870	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas	1450	Open in IMG/M
3300018431\|Ga0066655_11434428	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	503	Open in IMG/M
3300019789\|Ga0137408_1015433	All Organisms → cellular organisms → Bacteria	2318	Open in IMG/M
3300020170\|Ga0179594_10256494	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	660	Open in IMG/M
3300020580\|Ga0210403_10182412	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → Pseudomonas syringae group → Pseudomonas syringae group genomosp. 1 → Pseudomonas syringae	1721	Open in IMG/M
3300020581\|Ga0210399_10168368	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas	1816	Open in IMG/M
3300020582\|Ga0210395_11376392	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	515	Open in IMG/M
3300021088\|Ga0210404_10901467	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	506	Open in IMG/M
3300021168\|Ga0210406_10018507	All Organisms → cellular organisms → Bacteria → Acidobacteria	6548	Open in IMG/M
3300021168\|Ga0210406_10441215	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → Pseudomonas syringae group → Pseudomonas syringae group genomosp. 1 → Pseudomonas syringae	1037	Open in IMG/M
3300021170\|Ga0210400_10188319	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → Pseudomonas syringae group → Pseudomonas syringae group genomosp. 1 → Pseudomonas syringae	1674	Open in IMG/M
3300021170\|Ga0210400_10643038	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → Pseudomonas syringae group → Pseudomonas syringae group genomosp. 1 → Pseudomonas syringae	873	Open in IMG/M
3300021181\|Ga0210388_10528770	All Organisms → cellular organisms → Bacteria	1034	Open in IMG/M
3300021402\|Ga0210385_11297225	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	558	Open in IMG/M
3300021406\|Ga0210386_10057639	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	3098	Open in IMG/M
3300021406\|Ga0210386_10694426	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas	877	Open in IMG/M
3300021420\|Ga0210394_11001994	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	724	Open in IMG/M
3300021420\|Ga0210394_11258895	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	633	Open in IMG/M
3300021433\|Ga0210391_10510194	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	944	Open in IMG/M
3300021474\|Ga0210390_10810378	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	775	Open in IMG/M
3300021477\|Ga0210398_10434281	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → Pseudomonas syringae group → Pseudomonas syringae group genomosp. 1 → Pseudomonas syringae	1070	Open in IMG/M
3300022713\|Ga0242677_1009397	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas	1040	Open in IMG/M
3300025906\|Ga0207699_11274427	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	544	Open in IMG/M
3300025915\|Ga0207693_10162877	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → Pseudomonas syringae group → Pseudomonas syringae group genomosp. 1 → Pseudomonas syringae	1755	Open in IMG/M
3300025939\|Ga0207665_10736185	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	777	Open in IMG/M
3300026334\|Ga0209377_1222273	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	622	Open in IMG/M
3300026361\|Ga0257176_1025400	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	875	Open in IMG/M
3300026376\|Ga0257167_1069220	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	552	Open in IMG/M
3300026499\|Ga0257181_1013897	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → Pseudomonas syringae group → Pseudomonas syringae group genomosp. 1 → Pseudomonas syringae	1122	Open in IMG/M
3300026507\|Ga0257165_1068009	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	650	Open in IMG/M
3300026528\|Ga0209378_1044503	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	2207	Open in IMG/M
3300026528\|Ga0209378_1309329	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	507	Open in IMG/M
3300026542\|Ga0209805_1029411	All Organisms → cellular organisms → Bacteria	2824	Open in IMG/M
3300026551\|Ga0209648_10003561	All Organisms → cellular organisms → Bacteria	13097	Open in IMG/M
3300026551\|Ga0209648_10145851	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → Pseudomonas syringae group → Pseudomonas syringae group genomosp. 1 → Pseudomonas syringae	1876	Open in IMG/M
3300026551\|Ga0209648_10657324	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	573	Open in IMG/M
3300026555\|Ga0179593_1157589	All Organisms → cellular organisms → Bacteria → Proteobacteria	6136	Open in IMG/M
3300027181\|Ga0208997_1040216	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	689	Open in IMG/M
3300027376\|Ga0209004_1018047	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → Pseudomonas syringae group → Pseudomonas syringae group genomosp. 1 → Pseudomonas syringae	1104	Open in IMG/M
3300027376\|Ga0209004_1057664	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	654	Open in IMG/M
3300027512\|Ga0209179_1093765	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	667	Open in IMG/M
3300027537\|Ga0209419_1023970	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1127	Open in IMG/M
3300027565\|Ga0209219_1137442	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	592	Open in IMG/M
3300027583\|Ga0209527_1120453	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	586	Open in IMG/M
3300027605\|Ga0209329_1146479	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	519	Open in IMG/M
3300027629\|Ga0209422_1038304	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas	1169	Open in IMG/M
3300027671\|Ga0209588_1016750	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2266	Open in IMG/M
3300027671\|Ga0209588_1185023	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	653	Open in IMG/M
3300027842\|Ga0209580_10434014	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	655	Open in IMG/M
3300027842\|Ga0209580_10506581	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	601	Open in IMG/M
3300027846\|Ga0209180_10251960	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1016	Open in IMG/M
3300027884\|Ga0209275_10472164	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	713	Open in IMG/M
3300027884\|Ga0209275_10503496	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	690	Open in IMG/M
3300028020\|Ga0265351_1003270	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas	1221	Open in IMG/M
3300028536\|Ga0137415_11045973	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	628	Open in IMG/M
3300028536\|Ga0137415_11278473	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	551	Open in IMG/M
3300031708\|Ga0310686_107019059	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	592	Open in IMG/M
3300031715\|Ga0307476_10685034	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	759	Open in IMG/M
3300031720\|Ga0307469_11615142	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	623	Open in IMG/M
3300031753\|Ga0307477_10092570	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → Pseudomonas syringae group → Pseudomonas syringae group genomosp. 1 → Pseudomonas syringae	2099	Open in IMG/M
3300031754\|Ga0307475_11588392	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	500	Open in IMG/M
3300031820\|Ga0307473_11500109	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	511	Open in IMG/M
3300031962\|Ga0307479_10899065	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	858	Open in IMG/M
3300031962\|Ga0307479_10983959	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	813	Open in IMG/M
3300031962\|Ga0307479_12135534	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	507	Open in IMG/M
3300032174\|Ga0307470_10141688	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → Pseudomonas syringae group → Pseudomonas syringae group genomosp. 1 → Pseudomonas syringae	1455	Open in IMG/M
3300032174\|Ga0307470_11849659	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	512	Open in IMG/M
3300032180\|Ga0307471_102026630	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	722	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	99.24%
Host-Associated	Host-Associated	0.76%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	98.47%
Aquatic	Environmental → Aquatic	0.76%
Plants	Host-Associated → Plants	0.76%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	98.47%
Sediment	Environmental → Aquatic → Sediment	0.76%
Rhizosphere	Host-Associated → Plants → Rhizosphere	0.76%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	80.15%
Loam	Environmental → Terrestrial → Soil → Loam	18.32%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.76%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	0.76%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	41.98%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	25.19%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	12.98%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	9.16%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	9.16%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.76%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	0.76%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	36.64%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	16.79%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	8.40%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	8.40%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	6.87%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	6.87%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	6.11%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	3.82%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	2.29%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.53%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.76%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.76%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.76%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300002907	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_40cm	Environmental	Open in IMG/M
3300002910	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_80cm	Environmental	Open in IMG/M
3300002911	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_2_20cm	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005454	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_136	Environmental	Open in IMG/M
3300005537	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1	Environmental	Open in IMG/M
3300005542	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1	Environmental	Open in IMG/M
3300005546	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG	Environmental	Open in IMG/M
3300005561	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148	Environmental	Open in IMG/M
3300005575	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_151	Environmental	Open in IMG/M
3300005586	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140	Environmental	Open in IMG/M
3300005602	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006052	Freshwater sediment microbial communities from North America - Little Laurel Run_MetaG_LLR_2013	Environmental	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300007258	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300012683	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaG	Environmental	Open in IMG/M
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental	Open in IMG/M
3300012917	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG	Environmental	Open in IMG/M
3300012918	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012924	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300015052	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300015241	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015245	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300018431	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104	Environmental	Open in IMG/M
3300019789	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300020170	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad1_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300020582	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O	Environmental	Open in IMG/M
3300021088	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-M	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021181	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O	Environmental	Open in IMG/M
3300021402	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-O	Environmental	Open in IMG/M
3300021406	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021433	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-O	Environmental	Open in IMG/M
3300021474	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O	Environmental	Open in IMG/M
3300021477	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-O	Environmental	Open in IMG/M
3300022713	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300025906	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025939	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026334	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141 (SPAdes)	Environmental	Open in IMG/M
3300026361	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NL-03-B	Environmental	Open in IMG/M
3300026376	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DL-02-B	Environmental	Open in IMG/M
3300026499	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NR-06-B	Environmental	Open in IMG/M
3300026507	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - CO-12-B	Environmental	Open in IMG/M
3300026528	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156 (SPAdes)	Environmental	Open in IMG/M
3300026542	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148 (SPAdes)	Environmental	Open in IMG/M
3300026551	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)	Environmental	Open in IMG/M
3300026555	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300027181	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM2_M1 (SPAdes)	Environmental	Open in IMG/M
3300027376	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_RefH0_M1 (SPAdes)	Environmental	Open in IMG/M
3300027512	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2 (SPAdes)	Environmental	Open in IMG/M
3300027537	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM1H0_M3 (SPAdes)	Environmental	Open in IMG/M
3300027565	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_M1 (SPAdes)	Environmental	Open in IMG/M
3300027583	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M2 (SPAdes)	Environmental	Open in IMG/M
3300027605	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_M3 (SPAdes)	Environmental	Open in IMG/M
3300027629	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M3 (SPAdes)	Environmental	Open in IMG/M
3300027671	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 (SPAdes)	Environmental	Open in IMG/M
3300027842	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027846	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027884	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2 (SPAdes)	Environmental	Open in IMG/M
3300028020	Soil microbial communities from Maridalen valley, Oslo, Norway - NSE4	Environmental	Open in IMG/M
3300028536	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031715	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031753	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGIcombinedJ26739_1017583621	3300002245	Forest Soil	MANNIGSDHQSRPPIRLLISVLLLGTLLAWWGTRDHRHLFGESPRGPVAAAGMALPQVTQEESALLDRGFQLSERECAGCHEMATRSSAPSYQEIAAFYRRG
JGI25613J43889_100016148	3300002907	Grasslands Soil	MANRVGSEHQSPSRSPVRLLGSVLLLGTLLAWWGTRDQRRLFGESLREPVAAGSVVLPQLTQEESASLDRGSQISVRQCAGCHEMATRSSAPSYQEIVTFYRREFPASAGNSDLR
JGI25615J43890_10398963	3300002910	Grasslands Soil	MANRVGGEHHSRSRALTLLVVSVLLLGTLLAWWGTRGHRRLFGESRREPVAAGGTVLPHVTQEESALLDRGSQ
JGI25390J43892_100914421	3300002911	Grasslands Soil	MANSIGSEHQPPSRSPIRLVGSVLLLGTLLAWWGTRDHRRLFGESPREPVAAGGMVFPQAAPEENALLDRGSQISQRQCAGCHERATRSSAPSYQEIATFYRRGF
Ga0070714_1012142951	3300005435	Agricultural Soil	MANNVASAHRSRVLIGLLTSVLLLGTLLAWWGTRDHRQLFGESLRQPVAAAGTAVPEVTQQETALVDRGYEISQRQCAGCHEMTTRSSAPSYREIVTFYRRGF
Ga0070708_1006075381	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MANRVGGEHHLRPRSLRLLVGSVLLLGTLLAWWGTRGHRRLFGEPRREPVAAGGVVLPQVTQEEGALLDRGSQISERQCAGCHKMATRSTGPSYKEI
Ga0066687_108300101	3300005454	Soil	MANSIGSEHQPPSRSPIRLVGSVLLLGTLLAWWGTRDHRRLFGESPREPVAAGGMVFPQAAPEESALLDRGSQISQRQCAGCHERATRSSAPSYQEIATFYRRGFPTSAGNPDLRSRLAS
Ga0070730_103146751	3300005537	Surface Soil	MANNGENQHKSVSLISLVASVLLLGTLLSWWGTRDPRQLFRESLRQPVTAASAVVPQITQVESALVD
Ga0070732_100967213	3300005542	Surface Soil	MANNVDSEHRSRPLIGLLTSVLLLGTLLAWWGARDHRQLFGEPLRQPAIAASVVIPEVTQEESALVDRGYEISQRQCAGCHEMTTRSSAPSYREIVTFYRRGF
Ga0070732_106750511	3300005542	Surface Soil	MANNLGNEHPSRPPVRLVGSVLLLGTLLAWWGTRDHRELFGESLRQPVTAAGVVVPEVTQETSALMDRGYEISQRQCAGCHEMTTRSSAPSYQE
Ga0070696_1019042001	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	MANKIGSEHQSPSRPPIRLLAFLLLLGTLFAWWGTRDYRRLFGESLREPVAAASMVLPQVTQEESAMLGRGSQI
Ga0066699_108273542	3300005561	Soil	MASRVRSEHQSPSRPPIRLLGSVLLLGTLLAWWGTRDHRRLFGGSLREPLAAGGVVLPQVTQEESALLDRGSQISQRQCAGCHEMATRSSG
Ga0066702_105129841	3300005575	Soil	MANSIGSEHQPPSRSPIRLVGSVLLLGTLLAWWGTRDHRRLFGESPREPVAAGGMVFPQAAPEENALLDRGSQISQRQCAGCHERATRSSAPSYQEIATFYRRGFPTSAGNPDLRSRLAS
Ga0066691_102575043	3300005586	Soil	MANSIGSEDQPPSRSPIRLVGSVLLLGTLLAWWGTRDHRRVFGESPREPVAAGGMVFPQAAAEESALLDRGSQISQRQCAGCHERATRSSAPSYQEIATFY
Ga0070762_104731311	3300005602	Soil	MANNFENAHQPRPPILLLGFLLLLGTLFAWWGTRDYRRMFGESLREPVAAASMVLPQLTQEESALLDR
Ga0070717_109922261	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MANNVASAHRSRVLIGLLTSVLLLGTLLAWWGTRDHRQLFGESLRQPVAAAGTAVPEVTQQETALVDRGYEISQRQCAGCHEMTTRSS
Ga0070717_111114883	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MANNVVGEHRSRSMIGVLTSVLLLGTLLAWWGTRDHRELFGESLRQPVTAAGIAFPQAIPEDSALVDRGYEVS
Ga0070717_112896982	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MANNIGSEHPSRPPIRMLGFLLLLGTLFAWWGTRDYRRMFGESLREPVAAAGMVLPQVTQEESALLSRGSEISQRQCAGCHE
Ga0075029_1005434221	3300006052	Watersheds	MANRVTSEHQPPSRPVVRLVVSVLLLGALLAWWGTRGHRRLFGEARRKPVAAKEVVLPQITQDERSLLARGSQISQRQCAGCHEMAARSSGPSYKEIVTFYRREFPDSAGDSDLRARLAAAVTHPRPG
Ga0070716_1007903722	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	MANNVIGEHRSRSMIGVLTSVLLLGTLLAWWGTRDHRELFGESLRQPVTAAGIAFPQAIPEDSALVDRGYEVSERQCAGCHEMTTRSSAPSYREIVTFYRRGFAGAAS
Ga0070712_1001618581	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MANNVRREHQSASRLPIRLLGSVLLLGTLLAWWGTRDHRRLFGESPREPFAAAANVPLPQVTPEDRALLDRGFQISERQCAGCHAMTTRSSGPSYQEIVTFYRRNFSTSAGNPDLRSRLA
Ga0070712_1009348401	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MANNVIGEHRSRSMIGVLTSVLLLGTLLAWWGTRDHRELFGESLRQPVTAAGIAFPQAIPEDSALVDRGYEVSERQCAGCHEM
Ga0075425_1027575291	3300006854	Populus Rhizosphere	MANRIRSEQQSQSPLQVRLLGSVLLLGTLLAWWGTRDQRHLFGESLREPVAAGRVVLPQVTEEKTALLDRGSQISQRQCAGCHEMATRSS
Ga0099793_105975562	3300007258	Vadose Zone Soil	LGSVLLLGTLLAWWGTRDYRRLFGESLREPVAAAGVVLPLLTQEGSALLDHGSQISQRQCAGCHERVTRSSAPSYQEIATFYRRGSPTSASNPDLR
Ga0066710_1047847381	3300009012	Grasslands Soil	MEGPALVKLRKAHMANNLGSEHQSRTPIRLVGSVLLLGTLLAWWGTRDHRRLFGESPRRPVAVDGTALPQATQEESALLDRGSQISQRQCAGCHERATRSSAPSY
Ga0099829_107889792	3300009038	Vadose Zone Soil	MANRIGTGQQSPSRSPVRLLVSVLLLGTLLAWWGTRDDRLLFGDSPRKPVAADGVALPRATQAENVLLDRGFRLSQRQCAGCHETATRSSAPSYQEIVTFYRRELPASPGSLDVRSLASAVTHPRPGWGNFAPG
Ga0099830_100106358	3300009088	Vadose Zone Soil	MANDNGSEHQAPSRPPIRLLGSVLLVGTLLAWWGTRDHRRRFGESVREPVAAAGTVLPQATQEESALLDRGSQISRRQCAGCHEIATRSSAPSYQEIVTFYRREFPTSAGNPDLRSRLASAVTHPRP
Ga0099828_116378022	3300009089	Vadose Zone Soil	MVNRIGAEHPSPSRLPIRLVGSALLLGTLLAWWGTRDDRRLFGESPREPIATGGVVLPQVTQQESALLERGSQISQLQCAGCHEMTTRTSAPSYQEIVTFYRRESPASAGNRASAGARDLRSRLAS
Ga0099792_102621271	3300009143	Vadose Zone Soil	MANNVGSEHQSPSRPPISLLVGVLLLGTLLAWWGTRDHRRLFGESLREPVAAAGVGLPQTTQEESALLNRGSQISERQCAGCHEMFTRSSAPSYQEIVNFYRREIPASAGNPNLQS
Ga0099792_104342001	3300009143	Vadose Zone Soil	MANRIESEQKSPSHAPIRLLGFVLLLGTLLAWWGTRDHRPLFGESLREPVAAASAALPQVAQDESALLHRGSQISQRQCAGCHEMFTRSSAPSYQEIVNFYRRDIPASA
Ga0137392_100860184	3300011269	Vadose Zone Soil	MANRIGTGQQSPSRSPVRLLVSVLLLGTLLAWWGTRDDRLLFGDSPRKPVAADGVALPPATQAETVLLDRGFRISPRQCAGCPETATRSSAPSYQE
Ga0137392_101713423	3300011269	Vadose Zone Soil	MANSIAGEHQPRTPIRLVGSVLLLGTLLAWWGTRDHRRLFGESPRGPVAAAGMALPQVTQEESALLDRGFQLSERQCAGCHEMATRSSAP
Ga0137392_110199531	3300011269	Vadose Zone Soil	MANRVGGEHHSRSRALTLLVVSVLLLGTLLAWWGTRGHRRLFGESRREPVAAGGTVLPHVTQEESALLDRGSQISTQQCAGCHKMSTRSSGPSYREIVTFYRRKFS
Ga0137391_109391602	3300011270	Vadose Zone Soil	MANRVGGEHHSRSRTLTLLVGSALLLGTLLAWWGTRGHRRLFGEPLREPVAAGGTVLPPVTPEESALFDRGSVISQRQCAGCHEMATRSSGPSYREIVTFYRRKFSTSSGNFDLRSRL
Ga0137393_103386061	3300011271	Vadose Zone Soil	MANSIAGEHQPRTPIRLVGSVLLLGTLLAWWGTRDHRRLFGESPRGPVAAAGMALPQVTQEESALLDRGFQLSERQCAGCHEMATRSSAPSYQEIVTFYHRGSLSSA
Ga0137388_103753093	3300012189	Vadose Zone Soil	MANRIGTGQQSPSRSPVRLLVSVLLLGTLLAWWGTRDDRLLFRDSPRKPVAADGVALPRATQAENVLLDRGFRLSQRQCAGCHETATRSSAPSYQEIVTFYRRELPASPGSPDVRARLA
Ga0137388_112866351	3300012189	Vadose Zone Soil	MANNLGSEHQSRTPIRLVGSVLLLGTLLAWWGTRDHRRLFGESPREPVAAGGMVFPQAAPEESALLDRGSQISQ
Ga0137382_111265932	3300012200	Vadose Zone Soil	MANNFGSEHPSRPPVRLVGSVLLLGTLLSWWGTRDHRRLFGESPRGPVAAAGLVLPQATQEESALLSRGSEISQQRCAGCHERT
Ga0137399_103957583	3300012203	Vadose Zone Soil	MANRVGNEHQSPSRPPIRLLASVLLLGTLLAWWGTRDYRRLFGESVREPVAAGGVVLPQVTQEESALLDRGSRISQLQCAGCHEMSTRSNAPSYQEIVTFYRRRFPASAGNTDLRSRLAS
Ga0137399_111882961	3300012203	Vadose Zone Soil	MANNLGSEHQSRPPIRLLASVLLLGTLLAWWGTRDHRRLFGESVREPVAAGSVLLPQVMQEESALQDRGSQISQRQCAGCHEIATR
Ga0137381_104371371	3300012207	Vadose Zone Soil	MANSIGSEHQPPSRSPIRLVGSVLLLGTLLAWWGTRDHRRLFGESPREPVAAGGMVFPQAAPEESALLDRGSQI
Ga0137361_102811881	3300012362	Vadose Zone Soil	MANDNGSEHQAPSRPPIRLLGSVLLVGTLLAWWGTRDHRRLFGESPREPVAAAGMVLPQAPQEDSALLDRGSQISQRQCAGCHEM
Ga0137358_102214641	3300012582	Vadose Zone Soil	MANRVGSEHQSPSRPPISLLVGVLLLGTLLAWWGTRDHRTLFGESLREPVAAAGVGLPQTTREESALLNRGSQISERQCAGCHEMFTRSSAPSYQEIVNFYRREIPASAGNPDLQSRLA
Ga0137398_102419491	3300012683	Vadose Zone Soil	MANNLGSEHQSRPPIRLLASVLLLGTLLAWWGTRDHRRLFGESLREPVAAGGIVLPQVTQEESALLDRGSQISQRQCAGCHEMATRSS
Ga0137397_106373071	3300012685	Vadose Zone Soil	MANRVGNEHQSPSRPPIRLLASVLLLGTLLAWWGTRDYRRLFGESVREPVAAGGVVLPQVTQEESALLDRGSRISQLQCPGCHEMSTRSNAPSYQEIVTFYRRRFPA*
Ga0137395_104238693	3300012917	Vadose Zone Soil	VGSVLLLGTLLAWWGTRDHRRLFGESPRGPVAAAGMALPQVTQEESALLDRGFQLSERQCAGCHEMATRSSAPSYQEIVTFYRRGFSTSAGNPDLRS
Ga0137395_113032941	3300012917	Vadose Zone Soil	MANNVGSEHQSPSRPPISLLVGVLLLGTLLAWWGTRDHRTLFGESLREPVAAAGVGLPQTTQEESALLNLGSQISERQCAGCHEMFTRSSAPSYQEIVNFYRR
Ga0137396_105780972	3300012918	Vadose Zone Soil	MANNIGSEHQSRRPIRLLASVLLLGTLLAWWGTRDHRRLFGESPREPVAAGGMVTAQVTQEDSALLDRGSQISQR
Ga0137396_108050632	3300012918	Vadose Zone Soil	MANRIGNEQQSPSRPPVRLLVSGLLLGTLLAWWGTADHRHLFGESPRKPVAAEGVVLPEVTQEKTALVERGSQISQRQ
Ga0137359_100083901	3300012923	Vadose Zone Soil	MANDNGGEHQSRPPIRLLGSVLLLGTLLSWWGTRDHRRLFGESPREPIAAGGVLLPQVTPEDSALRDRGFQISERQCAGCHEMATRSSAPSYQEIVTFYRRGFPTSAGNIDLRSRRTSAVTDPRPG
Ga0137359_109680841	3300012923	Vadose Zone Soil	MANRVGGEHHSRSRALTLLLGSVLLLGSLLAWWGTRGHRRLFGESPREPVAAGGTVLPRVTPELSALLDRGFQISQQQCAGCHKMATRSTG
Ga0137413_101485531	3300012924	Vadose Zone Soil	MANRIESEQKSPSHAPIRLLGFVLLLGTLLAWWGTRDHRPLFGESLREPVAAASAALPQVAQDESALLHRGSQISQRQCAGCHEMFTRSSAPSYQEIVNF
Ga0137419_109517731	3300012925	Vadose Zone Soil	MANRIGNEQQSPSQPPVRLLVSVLLLGTLLAWWGTADHRHLFGESPRKPVAAEGVVLPEVTQEKTALVERGSQISQRQCAGCHEIATRSSAPSYQEIVTFYRREIRTV
Ga0137416_109953712	3300012927	Vadose Zone Soil	MANDNGSEHQAPSRPPIRLLGSVLLVGTLLAWWGTRDHRRLFGESVREPVAAAGTVLPQATQEESALLDRGSQISRRQCAGCHEIA
Ga0137416_116780541	3300012927	Vadose Zone Soil	MANDNGGEHQSRPPIRLLGSVLLLGTLLSWWGTRDHRRLFGESPREPIAAGGVLLPQVTPEDSALRDRGFQI
Ga0137404_106697943	3300012929	Vadose Zone Soil	MANNLGSGHPSRPLILLVGFLLLLGTLFAWWGTRDYRRLFGESVREPLAAADMVLPQLTQEDSALLDRGS
Ga0137404_106850693	3300012929	Vadose Zone Soil	MANSIRSEHQSSSRPPIRLLVSVLLLGTLLAWWGTRDHLRLFGESPREPAAAGAELLQQVTPENSALLDRGSQISQRQCAGCHEMATRSSAPSYQEIVTFYRRRFLTSSGNLDLRSRLASAVT
Ga0137404_114556112	3300012929	Vadose Zone Soil	MANSIGSEHQPPSRSPIRLVGSVLLLGTLLAWWGTRDHRRLFGESPREPVAAGGMVFPQAAPEESALLDRGSQISQRQCAGCH
Ga0137407_106079673	3300012930	Vadose Zone Soil	MANSIGSEHQPPSRSPIRLVGSVLLLGTLLAWWGTRDHRRLFGESPREPVAAGGMVFPQAAAEESALLDRGSQISQRQCAGCHERATRSSAPSYQEIATFYRRGFPTSAGNPDLRSSSATKRLNIGQDIQAFLRGLIGAAIK*
Ga0137410_103484551	3300012944	Vadose Zone Soil	MANNIGSEHQSPSRPPIRLLVFLLLLATLFAWWGTRDYRRLFGESLREPVAAAGMALPQVTQEESALLGRGSQISQRQCAGCHEMATRSSAPSYQEIVTFYRRGLPTSAGNPDLRSRLASAVTHPRP
Ga0137411_10379901	3300015052	Vadose Zone Soil	MANRVGSEHQSPSRSPVRLLGSVLLLGTLLAWWGTRDQRRLFGESLREPVAAGSVVLPQVTQEESASLDRGSQISVRQCAGCQRVVTKW
Ga0137418_112552331	3300015241	Vadose Zone Soil	MEMPGLVKLRKAHMANDIGSEHQSPSRPPIRLLGFVLLLGTLLAWWGTRDHRRLFGESVREPVAAAGTVLPQATQEESALLDRGSQISQRQCAGCHEIATRSSAPSYREIVTFYRRGFPTAAGNPDLRSRLASAVTHPRLAESAN
Ga0137409_102007801	3300015245	Vadose Zone Soil	MANRVGNEHQSASRPPIRLLASVPLLGTLLAWWGTRDYRRLFGESVREPVAAGGVVLPQVTQEESALLDRGSRISQLQCAGCHEMSTRSNAPSYQEIVTFYRRRFPAAAGNTDLRSRLASAVTHPRP
Ga0066655_101328703	3300018431	Grasslands Soil	MANSIGSEHQPPSRSPIRLVGSVLLLGTLLAWWGTRDHRRLFGESPREPVAAGGMVFPQAAAEESALLDRGSQISQRQCAGCHERATRSSAPSYQEIATFYR
Ga0066655_114344282	3300018431	Grasslands Soil	MANSIGSEHQPPSRSPIRLVGSVLLLGTLLAWWGTRDHRRLFGESPREPVAAGGMVFPQAAPEESALLDRGSQISQRQCAGCHERATRSSAPSYQEIATFYR
Ga0137408_10154333	3300019789	Vadose Zone Soil	MANSIGSEHQPPSRSPIRLVGSVLLLGTLLAWWGTRDHRRLFGESPREPVAAGGMVFPQAAAEESALLDRGSQISQRQCAGCHERATRSSAPSYQEIATFYRRGFPTSAGNPDLRSSSATKRLNIGQDIQAFLRGLIGAAIK
Ga0179594_102564941	3300020170	Vadose Zone Soil	MANRVGSEHQPPSPPPVHLLGSVLLLGTLLAWWGTRDHRRLFGESLREPVAAGSVVLPQATQEESASLDRGSQISVRQCAGCHEMATRSSAPSYQEIVTFYRREFPTSAGNSDLRARL
Ga0210403_101824121	3300020580	Soil	MANRAGSENQPTSRPPMGLVTSVLLLGTVLAWWGTRDHPRRLFGESLREPVAAASASLPQTTQGGCALLERGSQISQRQCAGCHEMFTRSSAPSYQELVAFYRREISASAGNSDLQSRLA
Ga0210399_101683681	3300020581	Soil	MANNVDSEHRSRPLIGLLTSVLLLGTLLAWWGTRDDRQLFGEPLRQPVTAAGIAFPQAIPEDSALVDRGYEVSERQCAGCHEMTTRSSAPSYG
Ga0210395_113763921	3300020582	Soil	MANNPKSEQAPRPPIRMVGSVLLLGTLLAWWGTRDHRRLFGESVREPIPTGGMVLPPVTQEDSALLDRGYQISQQQCAGCHEMTTRSTAPSYQDIV
Ga0210404_109014671	3300021088	Soil	MARLALVKVRKEPMANNVDSEHRSRPLIGLLTSVLLLGTLLAWWGTRDHRELFGESLRQPVTAAGIAVPQVTQEESALVDRGYKISQRQCAGCHEMTTRSSAPSYREIVTVYRSG
Ga0210406_100185076	3300021168	Soil	MANRVGSEHHSRSRQLTLLLGSVLLLGTLLAWWGTRGHRRLFGEPLREPVAAGDTVLPQVMPEESALLDRGSQISERQCAGCHKMATRSSGPSY
Ga0210406_104412153	3300021168	Soil	MANRVGSEQQSQPKPPVRLIVFMLLLGTLLAWWGTRDRRRLFGEARRKPVAAGEVVLPQITKDESSLLASGAQISQRQCAGCHEMAARSSGPSYKEIVTFYRREFPDSPGDSELRSRL
Ga0210400_101883193	3300021170	Soil	MANRVGSEPPSPSRLPVRLVVAVVLLGTLLAWWGTRGHRRLFGEPPRKPVPAGAADVPQNIQVDSAMLARGAEINERECAGCHKRAARSSGPSYQEIVTFYRREFPDSAGDSDL
Ga0210400_106430381	3300021170	Soil	MANRAGEEHHSRSRQLTLLVGSVLLLGTLLAWWGTRGHRRLFGEPPRRPVAAGDTVLPQVTQDEGALLARGSQISTRQCAGCHEM
Ga0210388_105287703	3300021181	Soil	MANNVDSEHRSRPLIGLLTSVLLLGTLLAWWGTRDDRQLFGEPLRQPVTAAGIAFPQAIPEDSALVDRGYEVSERQCAGCHEMTTRSSAPSYREIVTFYRRGFAGAASIPDL
Ga0210385_112972252	3300021402	Soil	MANNIGSDHQSRPPIRLLISVLLLGTLLAWWGTRDHRHLFGESPRGPVAAAGMALPQVTQEESALLDRGFQLSERECAGCHEM
Ga0210386_100576391	3300021406	Soil	MANRVGSEQQSQPKPPVRLIVFMLLLGTLLAWWGTRDRRRLFGEARRKPVAAGEVVLPQITKDESSLLASGAQISQRQCAGCHEMAARSSGP
Ga0210386_106944263	3300021406	Soil	MANNVDSEHRSRPLIGLLTSVLLLGTLLAWWGTRDHRELFGESLRQPVTAAGIAVPQVTQEESALVDRGYKISQRQCAGCHE
Ga0210394_110019942	3300021420	Soil	MANDFENAHQPRPPILLLGFLLLLGTLFAWWGTRDYRRMFGESLREPVAAASMVLPQLTQEESALLDRGSQISQRQCAGCHERATRSSAPSYR
Ga0210394_112588951	3300021420	Soil	MANRVGSEQQSQPKPPVRLIVFMLLLGTLLAWWGTRDRRRLFGEARRKPVAAGEVALPQITKDESSLLASGAQISQRQCAGCHEMAARSSG
Ga0210391_105101942	3300021433	Soil	MANNTESEQASRPPIRLVGSVLLLGTLLAWWGTRDHRRLFGESVREPIPTGGMVLPPATQEDTALLDRGYQISQQQCAGCH
Ga0210390_108103781	3300021474	Soil	MANNVDSEHRSRPLIGLLTSVLLLGTLLAWWGTRDYRELFGESLRQPATAAGIAVPQVTQEESALVDRGYKISQRQCAGCHEMTTRSSAPSYREIVTVYRSGFAGAAGDLGLRSRL
Ga0210398_104342813	3300021477	Soil	MERPAPQRVQKAHMANNTISEQAPRPPIRLVGSVLLLGTLLAWWGTRDHRRLFGESVREPIPTGGMVLPPVTQEDSALLDRGYLISQQQCAGCHEMTT
Ga0242677_10093973	3300022713	Soil	MARLAVVEVRREPMASNLDSEHRLRPLIGLLTSVLLLGTLLAWWGTRDHRQLFGESLRQPVTAAGVAVPQVTSETSALLDRGFQMSERQCAGCHEMARRSS
Ga0207699_112744271	3300025906	Corn, Switchgrass And Miscanthus Rhizosphere	MANNLGSEHQSRTPIRLVGSVLLLGTLLAWWGTRDHRRLFGESPRRPVAVDETALPQATQEESALLDRGSQISQRQCVGCHETAKRSSAPSYQ
Ga0207693_101628771	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	MANNVIGEHRSRSMIGVLTSVLLLGTLLAWWGTRDHRELFGESLRQPVTAAGIAFPQAIPEDSALVDRGYEVSERQCAGCHEMTTRSSAPSYREIVTFYRRGFAGAASIPDLRSRLASA
Ga0207665_107361851	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	MANNVIGEHRSRSMIGVLTSVLLLGTLLAWWGTRDHRELFGESLRQPVTAAGIAFPQAIPEDSALVDRGYEVSERQCAGCHEMTTRSSAPSYREIVTFYRRGFAGAASIPDLRSRLASAVTH
Ga0209377_12222732	3300026334	Soil	MANNVISEHRSRSIIGLLTFVLLLGTLLAWWGTRDQRKMFGESLRQPAIAASVVVPRITQEDSALLDRGYEISQRQCAGCHEMTTRSSAPSY
Ga0257176_10254001	3300026361	Soil	MVNKVGGEHQSPSHAPIRLLGGVLLLGTLLAWWGTRDHRRLFGESLREPLAAGAVVLPQVTQEESALLDRGSQISQRQCAGCHEMFTRSSAPSYQEIVTFYRREFPTSAGNPDLRSRLAS
Ga0257167_10692202	3300026376	Soil	MANRGGSEQPSASRPPVSLLVSVLLLGTLLAWWGTRDRRRQFGEARRKPVAAGEVVLPQITQDESSLLARGSQISQRQCAGCHEMAARSSGPSYKEIVNFYRREFP
Ga0257181_10138973	3300026499	Soil	MVNKVGGEHQSPSHAPIRLLGGVLLLGTLLAWWGTRDHRRLFGESLREPLAAGAVVLPQVTQEESALLDRGSQISQRQCA
Ga0257165_10680092	3300026507	Soil	MVNKVGGEHQSPSHAPIRLLGGVLLLGTLLAWWGTRDHRRLFGESLREPLAAGAVVLPQVTQEESALLDRGSQISQRQCAGCHEMFTRSSAPSYQEI
Ga0209378_10445034	3300026528	Soil	MANSIGSEHQPPSRSPIRLVGSVLLLGTLLAWWGTRDHRRLFGESPREPVAAGGMVFPQAAPEESALLDRGSQISQRQCAGCHERATRSSAPSYQEIATFYRR
Ga0209378_13093291	3300026528	Soil	MANSIGSEHQPPSRSPIRLVGSVLLLGTLLAWWGTRDHRRLFGESPREPVAAGGMVFPQAAAEESALLDRGSQISQRQCAGCHERATRSSAPSYQEIATFYRR
Ga0209805_10294111	3300026542	Soil	MANSIGSEHQPPSRSPIRLVGSVLLLGTLLAWWGTRDHRRLFGESPREPVAAGGMVFPQAAAEESAVLDRGSQISQRQC
Ga0209648_1000356117	3300026551	Grasslands Soil	MANRVGGEHHSRSRTLTLLVGSALLLGTLLAWWGTRGHRRLFGEPRREPVAAGGTVLPPVTPEESALFDRGSLISQRQCAGCHEMATR
Ga0209648_101458513	3300026551	Grasslands Soil	VVKLLKAHMANRVGGEHHSRSRTLTLLVGFVLLLGTLLAWWGTRGHRRLFGEPLREPVAAGGTVLPPVTPEESALFDRGSLISQRQCAGCHEMATR
Ga0209648_106573242	3300026551	Grasslands Soil	MANNLGSEHQSRPPIRLLASVLLLGTLLAWWGTRDHRRLFGESLREPVAAGGIVLPQVTQEESALLDRGSQIS
Ga0179593_11575899	3300026555	Vadose Zone Soil	MANRVGGEHHSRSRALTLLLGSVLLLGSLLAWWGTRGHRRLFGESPREPVAAGGTVLPRVTPELSALLDRGFQISQQQCAGCHKMATRSTGPSYQEIVTFYRREFPTSAGKS
Ga0208997_10402161	3300027181	Forest Soil	MANRVGSEHQSPSRAPIRLVGSVLLLGTLLAWWGTRDHRRLFGESLREPLAAGAVVLPQVTQEESALLDRGSQISQRQCAGCHEMFTRSSAPSYQEIVTFYRR
Ga0209004_10180471	3300027376	Forest Soil	MANNFENPNEPRPPVLLLSFLLLLGTLFAWWGTRDYRRLFAEESREPVAAAGIALPEVTQETSALLDRGFQLSERRCAGCHESTARSSAPSYQEIVKFYRRGFATSAGNAD
Ga0209004_10576642	3300027376	Forest Soil	MANNVGNEHPSRPPIGLLTSVLLLGTLLAWWGTRDHRELFEESLRQPVAAAGVAVPEVTQETSALVDRGYEISQRQCSGCHEMATRSTAPSYQNIVAFYRRGFSSTGGKSDLRSRLASAVAHPQP
Ga0209179_10937652	3300027512	Vadose Zone Soil	MANRIESEQKSPSHAPIRLLGFVLLLGTLLAWWGTRDHRPLFGESPREPVAAASAALPQVAQDESALLHRGSQIS
Ga0209419_10239701	3300027537	Forest Soil	MANRVGGEHHSRSRPLTLLVGSALVLGTLLAWWGTRGHRRLFGEPRREPVAAGGVVLPQVTQEENALLDRGSQISTRQCAGCHEMAARSSGPSYKEIVTFYRREFPTS
Ga0209219_11374422	3300027565	Forest Soil	MANNIGSAHQSRPPIRLLISVLLLGTLLAWWGTRDHRRLFGESLREPVAAASMVLQQVTQENSALLDRGSEISQRQCAGCHE
Ga0209527_11204531	3300027583	Forest Soil	MANNPKSEQAPRPPIRMVGSVLLLGTLLAWWGTRDHRQLFGESLRQPVTAAGVAVPQVTSETSALLDRGFQISERQCAGCHEMARRSSAPSYR
Ga0209329_11464791	3300027605	Forest Soil	MANRVGGEHHSRSRALTLLVGSVLLLGTLLAWWGTRGHRRLFGEPRREPVAAGGVVLPQVTQEENALLDRGSRISTRQCAGCH
Ga0209422_10383041	3300027629	Forest Soil	MERPALVKLRKAHMANNFGSEHPSRPPVRLVGSVLLLGTLLAWWGTRDHRRLFGESPRGPVAAAGTALPQVTQEESALLDRGFQLSERQCAGCHEMATRS
Ga0209588_10167504	3300027671	Vadose Zone Soil	MANRVGGEHHSRSRTLTLLVGSVLLLGTLLAWWGTRGHRRLFGEPLREPVAAGGTVLPPVTPEESALFDRGSQISQRQCAGCHEMATRSSGPSYREIVTFYRRKFSTSSGNSD
Ga0209588_11850231	3300027671	Vadose Zone Soil	MVNKVGGEHQSPSHAPIRLLGGVLLLGTLLAWWGTRDHRRLFGESLREPLAAGAVVLPQVTQEESALLDRGSQISQRQCTG
Ga0209580_104340141	3300027842	Surface Soil	MANNVASEHRSRLLIGLVTSVLLLGTLLAWWGTRDHRQLFGESLRQPVAAAGTVVPEVTQQETALVDRGYEISQRQCAGCHEMT
Ga0209580_105065811	3300027842	Surface Soil	MANNFGSEHPSRPPIGLLISVLLLGTLLAWWGTRDHRELFGESLRQPVTAAVVVPEVTQETSALVDRGYEISQRQCAGCHEMTTRSSAPSYQEIVTFYRP
Ga0209180_102519601	3300027846	Vadose Zone Soil	VVKLLKAHMANRVGGEHHSRSRTLTLLVGSALLLGTLLAWWGTRGHRRLFGEPLREPVAAGGTVLPPVTPEESALFDRGSQISQRQCAGCHEMATRSSGPSYREIVTFYRRKFSTSSGNFDL
Ga0209275_104721642	3300027884	Soil	MANNFENAHQPRPPILLLGFLLLLGTLFAWWGTRDYRRMFGESLREPVAAASMVLPQLTQEESALLDRGS
Ga0209275_105034962	3300027884	Soil	MANNTESEQAPRPPIRLAGSVLLLGTLLAWWGTRDHRRLFGESVREPIPTGGMVLPPVTQEDSALLDRGYLISQQQCAGCHEMTTRSTAPSYQEIVTFYRREF
Ga0265351_10032703	3300028020	Soil	MANNTGNRQQSLLPIGLLTSVLLLGTLLAWWGTRDHRRFFGESVREPIAAEGMVLPQVTEENSALLDRGSEISQRECAGCHEGTTRSS
Ga0137415_110459732	3300028536	Vadose Zone Soil	MANNLGGEHQSRPPILLLGSVLLLGTLLAWWGTRDHRHLFGESLREPVAAGKMVLPQVTPAENALLDRGFQISQRQCAGCHEVATRSSA
Ga0137415_112784731	3300028536	Vadose Zone Soil	MANNLGSEHQPPSRPPIRLLGFLLLLGTLFAWWGTRDYRRLFGESLREPVAAAGMVLPQVTQEESALLSRGSQISQRQCAGCHE
Ga0310686_1070190591	3300031708	Soil	MANNTGNRQQSLLPIGLLTSVLLLGTLLAWWGTRDHRRFFGESVREPIAAEGMVLPQVTEENSSLLDRGSEISQRECAGCHEGTTRSSAPSYWEIVTFYRREFPSAAGDADLRSRLASSVTHP
Ga0307476_106850343	3300031715	Hardwood Forest Soil	MANNFENPDQPRPPIALLSFLLLLGTLFAWWGTRDYRRLFAEEPRGPVAAAGMGLPQLTQEEGALLDRGFQL
Ga0307469_116151421	3300031720	Hardwood Forest Soil	MANNHGSEHPSRPPVPLVGSLLLLGTLFAWWGTRDYRRLFGESLREPVAAAGVVLPQLTQEESALLDHGSQISQRQCAGCHEKATRSSAPSYQEIVTFYRRGLHTSAGNPDLRSRLASA
Ga0307477_100925701	3300031753	Hardwood Forest Soil	MANNIESQHRSRPLVGLLTSVLLLGTLLAWWGTRDRLQLFGESLRQPVTAAGMVIPQVTQEESALVHRGYEISERQCAGCHEMTTRSSAPSYLEIVTFYSGKFARAAG
Ga0307475_115883922	3300031754	Hardwood Forest Soil	MERPAPVKLRKAHMANSIGGEHQPRTPIRLVGSVLLLGTLLAWWGTRDHRRQFGESPRGPVAAAGMALPQVTQEESALLDRGFQLSERQCAGCHEMAMRSSAPSYQEI
Ga0307473_115001091	3300031820	Hardwood Forest Soil	MANNHGSEHPSRPPVPLVGSLLLLGTLFAWWGTRDYRRLFGESLREPVAAAGVVLPQLTQEESALLDHGSQISQRQCAGCHETATRSNAPGYQEI
Ga0307479_108990652	3300031962	Hardwood Forest Soil	MANNFENPDQPRPPIALLSLLLLLGTLFAWWGTRDYRRLFAEEPRGPVAAAGMGLPQLTQEEGALLDRGFQLSERQCAGCHEMTRRSSAPSYREIVTFYRRGFSTTASNPDLRSRLASAVTHPQPG
Ga0307479_109839591	3300031962	Hardwood Forest Soil	MANNIGSERQSTSRPPIRLLVFLLLLGTLFAWWGTRDYRRLFGESLREPVAAAGMVLPQVTQEESALLGRGSQISQRQCAGCHEIARRSSAPSYQEIATFY
Ga0307479_121355341	3300031962	Hardwood Forest Soil	MANNIESEHRSRPLIGLLTSVLLLGTLLAWWGTRDHLQLFGESLRQPVTAAGMVIPQVTQEESALVDRGYEISERQCAGCHEMTTRSS
Ga0307470_101416881	3300032174	Hardwood Forest Soil	MANRVGSEHHSRSRQLTLLLGSVLLLGTLLAWWGTRGHRRLFGEPLREPVAAGDTVLPQVMPEESALLDRGSQISERQCAGCHKMATRSSGPSYRE
Ga0307470_118496591	3300032174	Hardwood Forest Soil	MANNVRREHQSASRLPIRLLGSVLLLGTLLAWWGTRDHRRLFGESPREPFAAAANVPLPQVTPEDRALLDRGFQISERQCAGCHAMTTRSSGPSYQEIVTFYRRNFSTSAGNPDSR
Ga0307471_1020266302	3300032180	Hardwood Forest Soil	MANNFENPDQPRPPIALLSFLLLLGTLFAWWGTRDYRRLFAEEPRGPVAAAGMGLPQLTQEEGALLDRGFQLSERQCA

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F062099

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences