Metagenome Family F061898

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F061898
Family Type	Metagenome
Number of Sequences	131
Average Sequence Length	45 residues
Representative Sequence	AAHRDALREGAKALYQALNPRRNDKDDIAQMTPEEEVLLLHVME
Number of Associated Samples	107
Number of Associated Scaffolds	131

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	0.76 %
% of genes near scaffold ends (potentially truncated)	97.71 %
% of genes from short scaffolds (< 2000 bps)	90.08 %
Associated GOLD sequencing projects	97
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.45

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Bacteria (69.466 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (25.191 % of family members)
Environment Ontology (ENVO)	Unclassified (41.985 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (43.511 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 45.83% β-sheet: 0.00% Coil/Unstructured: 54.17%
Feature Viewer

Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.45
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.45
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 131 Family Scaffolds
PF00582	Usp	30.53
PF00571	CBS	6.87
PF04972	BON	6.11
PF00034	Cytochrom_C	3.82
PF07731	Cu-oxidase_2	3.82
PF02525	Flavodoxin_2	1.53
PF00520	Ion_trans	1.53
PF00072	Response_reg	0.76
PF10025	DUF2267	0.76
PF09721	Exosortase_EpsH	0.76
PF13549	ATP-grasp_5	0.76
PF12616	DUF3775	0.76
PF07485	DUF1529	0.76
PF06150	ChaB	0.76
PF04828	GFA	0.76
PF12760	Zn_Tnp_IS1595	0.76
PF01872	RibD_C	0.76
PF00690	Cation_ATPase_N	0.76
PF07813	LTXXQ	0.76

COG ID	Name	Functional Category	% Frequency in 131 Family Scaffolds
COG2132	Multicopper oxidase with three cupredoxin domains (includes cell division protein FtsP and spore coat protein CotA)	Cell cycle control, cell division, chromosome partitioning [D]	3.82
COG3678	Periplasmic chaperone Spy, Spy/CpxP family	Posttranslational modification, protein turnover, chaperones [O]	3.05
COG0262	Dihydrofolate reductase	Coenzyme transport and metabolism [H]	0.76
COG0474	Magnesium-transporting ATPase (P-type)	Inorganic ion transport and metabolism [P]	0.76
COG1985	Pyrimidine reductase, riboflavin biosynthesis	Coenzyme transport and metabolism [H]	0.76
COG3791	Uncharacterized conserved protein	Function unknown [S]	0.76
COG4572	Cation transport regulator ChaB	Inorganic ion transport and metabolism [P]	0.76

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	69.47 %
Unclassified	root	N/A	30.53 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	69.47 %
Unclassified	root	N/A	30.53 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	69.47 %
Unclassified	root	N/A	30.53 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	64.12 %
Unclassified	root	N/A	30.53 %
Nitrospirae	phylum	All Organisms → cellular organisms → Bacteria → Nitrospirae	0.76 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.76 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.76 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	52.67 %
Unclassified	root	N/A	30.53 %
unclassified Proteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria	2.29 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.76 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	0.76 %
Nitrospira	class	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira	0.76 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	30.53 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	26.72 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	3.05 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	2.29 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.76 %
Nitrospirales	order	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales	0.76 %
Bacilli	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli	0.76 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	30.53 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2.29 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	2.29 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	0.76 %
Nitrospiraceae	family	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae	0.76 %
Bacillales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales	0.76 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	0.76 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.76 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	30.53 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2.29 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	2.29 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.76 %
Thermoactinomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Thermoactinomycetaceae	0.76 %
Candidatus Sulfobium	genus	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Candidatus Sulfobium	0.76 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	0.76 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.76 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	30.53 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2.29 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	2.29 %
Candidatus Sulfobium mesophilum	species	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Candidatus Sulfobium → Candidatus Sulfobium mesophilum	0.76 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.76 %
Thermoactinomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Thermoactinomycetaceae	0.76 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	0.76 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.76 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.76 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2070309004\|prs_FIHLEPW02T0SLW	All Organisms → cellular organisms → Bacteria → Proteobacteria	503	Open in IMG/M
2228664021\|ICCgaii200_c0654714	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	917	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_100450838	Not Available	579	Open in IMG/M
3300000893\|AP72_2010_repI_A001DRAFT_1072625	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	543	Open in IMG/M
3300000955\|JGI1027J12803_105833159	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1850	Open in IMG/M
3300005328\|Ga0070676_11090976	Not Available	603	Open in IMG/M
3300005332\|Ga0066388_101190714	All Organisms → cellular organisms → Bacteria	1301	Open in IMG/M
3300005332\|Ga0066388_104973253	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	675	Open in IMG/M
3300005332\|Ga0066388_105009073	Not Available	673	Open in IMG/M
3300005332\|Ga0066388_107169923	All Organisms → cellular organisms → Bacteria → Proteobacteria	560	Open in IMG/M
3300005332\|Ga0066388_107519480	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	547	Open in IMG/M
3300005332\|Ga0066388_108550585	All Organisms → cellular organisms → Bacteria → Proteobacteria	509	Open in IMG/M
3300005332\|Ga0066388_108727762	All Organisms → cellular organisms → Bacteria → Proteobacteria	503	Open in IMG/M
3300005334\|Ga0068869_100306025	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1285	Open in IMG/M
3300005347\|Ga0070668_100324738	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1296	Open in IMG/M
3300005471\|Ga0070698_100650007	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	996	Open in IMG/M
3300005545\|Ga0070695_100396166	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1046	Open in IMG/M
3300005549\|Ga0070704_100126641	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1972	Open in IMG/M
3300005713\|Ga0066905_100054953	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2463	Open in IMG/M
3300005764\|Ga0066903_101700807	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1201	Open in IMG/M
3300005764\|Ga0066903_106115847	Not Available	630	Open in IMG/M
3300005843\|Ga0068860_102371785	Not Available	551	Open in IMG/M
3300006038\|Ga0075365_10201433	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1394	Open in IMG/M
3300006353\|Ga0075370_10417711	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	806	Open in IMG/M
3300006845\|Ga0075421_101808512	Not Available	657	Open in IMG/M
3300006871\|Ga0075434_100078919	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3288	Open in IMG/M
3300006871\|Ga0075434_102006768	Not Available	584	Open in IMG/M
3300009011\|Ga0105251_10284516	Not Available	748	Open in IMG/M
3300009094\|Ga0111539_10470544	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1463	Open in IMG/M
3300010043\|Ga0126380_10151825	All Organisms → cellular organisms → Bacteria	1485	Open in IMG/M
3300010047\|Ga0126382_11366253	Not Available	644	Open in IMG/M
3300010358\|Ga0126370_10156932	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1666	Open in IMG/M
3300010358\|Ga0126370_10953995	Not Available	779	Open in IMG/M
3300010366\|Ga0126379_11175436	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	873	Open in IMG/M
3300010373\|Ga0134128_11547243	Not Available	730	Open in IMG/M
3300010376\|Ga0126381_102818255	Not Available	694	Open in IMG/M
3300010379\|Ga0136449_102556774	All Organisms → cellular organisms → Bacteria	730	Open in IMG/M
3300012202\|Ga0137363_11629749	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	537	Open in IMG/M
3300012202\|Ga0137363_11666516	Not Available	530	Open in IMG/M
3300012353\|Ga0137367_10408216	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	963	Open in IMG/M
3300012500\|Ga0157314_1044616	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	547	Open in IMG/M
3300012532\|Ga0137373_10897879	All Organisms → cellular organisms → Bacteria	650	Open in IMG/M
3300012948\|Ga0126375_11290203	Not Available	613	Open in IMG/M
3300012971\|Ga0126369_10392790	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1423	Open in IMG/M
3300012971\|Ga0126369_12889979	Not Available	562	Open in IMG/M
3300014267\|Ga0075313_1078384	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	798	Open in IMG/M
3300014968\|Ga0157379_10806617	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	886	Open in IMG/M
3300015200\|Ga0173480_11162406	Not Available	519	Open in IMG/M
3300015371\|Ga0132258_12481903	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1297	Open in IMG/M
3300015373\|Ga0132257_101138521	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	986	Open in IMG/M
3300015374\|Ga0132255_100232031	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2628	Open in IMG/M
3300016294\|Ga0182041_12293303	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	505	Open in IMG/M
3300016319\|Ga0182033_10072666	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2429	Open in IMG/M
3300016319\|Ga0182033_10268874	All Organisms → cellular organisms → Bacteria → Proteobacteria	1393	Open in IMG/M
3300016319\|Ga0182033_11000331	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	744	Open in IMG/M
3300016319\|Ga0182033_11573489	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	594	Open in IMG/M
3300016371\|Ga0182034_10420545	Not Available	1100	Open in IMG/M
3300016387\|Ga0182040_10155689	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1634	Open in IMG/M
3300016404\|Ga0182037_11514775	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	595	Open in IMG/M
3300016404\|Ga0182037_11757097	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	553	Open in IMG/M
3300016445\|Ga0182038_11786071	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	555	Open in IMG/M
3300017933\|Ga0187801_10421368	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	557	Open in IMG/M
3300018073\|Ga0184624_10445406	Not Available	569	Open in IMG/M
3300021560\|Ga0126371_12425220	All Organisms → cellular organisms → Bacteria → Proteobacteria	634	Open in IMG/M
3300025901\|Ga0207688_10260869	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1051	Open in IMG/M
3300025910\|Ga0207684_10106128	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2403	Open in IMG/M
3300025919\|Ga0207657_10138271	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1992	Open in IMG/M
3300025922\|Ga0207646_10687656	Not Available	915	Open in IMG/M
3300025923\|Ga0207681_10254018	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1374	Open in IMG/M
3300025937\|Ga0207669_10272996	Not Available	1271	Open in IMG/M
3300025945\|Ga0207679_11496837	Not Available	619	Open in IMG/M
3300025986\|Ga0207658_10329493	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1324	Open in IMG/M
3300026067\|Ga0207678_11368643	Not Available	626	Open in IMG/M
3300027874\|Ga0209465_10215780	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	958	Open in IMG/M
3300027874\|Ga0209465_10483041	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Thermoactinomycetaceae	619	Open in IMG/M
3300027909\|Ga0209382_10900346	Not Available	932	Open in IMG/M
3300028608\|Ga0247819_10412492	Not Available	782	Open in IMG/M
3300028719\|Ga0307301_10271720	Not Available	555	Open in IMG/M
3300028768\|Ga0307280_10323812	Not Available	565	Open in IMG/M
3300028814\|Ga0307302_10498646	Not Available	604	Open in IMG/M
3300031231\|Ga0170824_105587309	Not Available	683	Open in IMG/M
3300031543\|Ga0318516_10266041	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	991	Open in IMG/M
3300031544\|Ga0318534_10590956	Not Available	631	Open in IMG/M
3300031545\|Ga0318541_10205902	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1089	Open in IMG/M
3300031545\|Ga0318541_10678598	Not Available	576	Open in IMG/M
3300031546\|Ga0318538_10201302	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1063	Open in IMG/M
3300031573\|Ga0310915_10272419	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1193	Open in IMG/M
3300031681\|Ga0318572_10078118	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1834	Open in IMG/M
3300031681\|Ga0318572_10305231	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	941	Open in IMG/M
3300031744\|Ga0306918_10976579	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Candidatus Sulfobium → Candidatus Sulfobium mesophilum	658	Open in IMG/M
3300031768\|Ga0318509_10257274	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	975	Open in IMG/M
3300031769\|Ga0318526_10418736	Not Available	547	Open in IMG/M
3300031770\|Ga0318521_10105076	All Organisms → cellular organisms → Bacteria → Proteobacteria	1560	Open in IMG/M
3300031777\|Ga0318543_10057378	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1603	Open in IMG/M
3300031778\|Ga0318498_10120990	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1190	Open in IMG/M
3300031780\|Ga0318508_1080130	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	892	Open in IMG/M
3300031794\|Ga0318503_10002771	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3924	Open in IMG/M
3300031795\|Ga0318557_10145786	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1068	Open in IMG/M
3300031796\|Ga0318576_10226556	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	880	Open in IMG/M
3300031797\|Ga0318550_10051598	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1851	Open in IMG/M
3300031819\|Ga0318568_10829463	Not Available	573	Open in IMG/M
3300031835\|Ga0318517_10105884	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1237	Open in IMG/M
3300031845\|Ga0318511_10031306	All Organisms → cellular organisms → Bacteria → Proteobacteria	2034	Open in IMG/M
3300031879\|Ga0306919_11416848	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	524	Open in IMG/M
3300031890\|Ga0306925_11033265	All Organisms → cellular organisms → Bacteria → Proteobacteria	835	Open in IMG/M
3300031910\|Ga0306923_11844405	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	619	Open in IMG/M
3300031941\|Ga0310912_10930423	Not Available	668	Open in IMG/M
3300031942\|Ga0310916_10378368	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1204	Open in IMG/M
3300031945\|Ga0310913_10716027	Not Available	707	Open in IMG/M
3300031946\|Ga0310910_10423367	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1056	Open in IMG/M
3300031946\|Ga0310910_11556709	Not Available	506	Open in IMG/M
3300031947\|Ga0310909_10808066	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	774	Open in IMG/M
3300031954\|Ga0306926_10019725	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	7725	Open in IMG/M
3300031954\|Ga0306926_10167821	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2722	Open in IMG/M
3300031954\|Ga0306926_12621598	All Organisms → cellular organisms → Bacteria → Proteobacteria	549	Open in IMG/M
3300031959\|Ga0318530_10134002	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1000	Open in IMG/M
3300032000\|Ga0310903_10572477	Not Available	598	Open in IMG/M
3300032001\|Ga0306922_10780075	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1000	Open in IMG/M
3300032010\|Ga0318569_10509615	All Organisms → cellular organisms → Bacteria → Proteobacteria	561	Open in IMG/M
3300032051\|Ga0318532_10000514	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	8805	Open in IMG/M
3300032066\|Ga0318514_10024607	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2771	Open in IMG/M
3300032076\|Ga0306924_10671192	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1166	Open in IMG/M
3300032122\|Ga0310895_10296126	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	764	Open in IMG/M
3300032160\|Ga0311301_12245450	Not Available	624	Open in IMG/M
3300032261\|Ga0306920_100252250	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2632	Open in IMG/M
3300032261\|Ga0306920_100412586	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2007	Open in IMG/M
3300032261\|Ga0306920_104393076	Not Available	505	Open in IMG/M
3300033289\|Ga0310914_10802460	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	839	Open in IMG/M
3300033289\|Ga0310914_11069508	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	707	Open in IMG/M
3300033550\|Ga0247829_11211120	Not Available	626	Open in IMG/M
3300034147\|Ga0364925_0282243	Not Available	620	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	81.68%
Host-Associated	Host-Associated	18.32%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	80.15%
Plants	Host-Associated → Plants	18.32%
Aquatic	Environmental → Aquatic	1.53%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	79.39%
Rhizosphere	Host-Associated → Plants → Rhizosphere	11.45%
Rhizoplane	Host-Associated → Plants → Rhizoplane	5.34%
Roots	Host-Associated → Plants → Roots	1.53%
Freshwater	Environmental → Aquatic → Freshwater	0.76%
Sediment	Environmental → Aquatic → Sediment	0.76%
Floodplain	Environmental → Terrestrial → Floodplain	0.76%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	65.65%
Loam	Environmental → Terrestrial → Soil → Loam	12.98%
Soil	Host-Associated → Plants → Rhizosphere → Soil	6.11%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	5.34%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	3.05%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	2.29%
Bulk Soil	Host-Associated → Plants → Roots → Bulk Soil	1.53%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	0.76%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.76%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.76%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	0.76%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	43.51%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	16.03%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	9.16%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	6.11%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	5.34%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	3.82%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	3.05%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	3.05%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	2.29%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	2.29%
Unclassified	Host-Associated → Plants → Roots → Bulk Soil → Unclassified	1.53%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	0.76%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.76%
Tropical Rainforest	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest	0.76%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.76%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	0.76%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	25.19%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	16.79%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	9.16%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	7.63%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.82%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	3.82%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	3.05%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	3.05%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	3.05%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	2.29%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	2.29%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	2.29%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	2.29%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	1.53%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	1.53%
Populus Endosphere	Host-Associated → Plants → Roots → Bulk Soil → Unclassified → Populus Endosphere	1.53%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	1.53%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	0.76%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.76%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.76%
Green-Waste Compost	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest → Green-Waste Compost	0.76%
Natural And Restored Wetlands	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands	0.76%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	0.76%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.76%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.76%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere	0.76%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.76%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.76%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.76%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2070309004	Green-waste compost microbial communities at University of California, Davis, USA, from solid state bioreactor - Luquillo Rain Forest, Puerto Rico	Environmental	Open in IMG/M
2228664021	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000893	Forest soil microbial communities from Amazon forest - Pasture72 2010 replicate I A001	Environmental	Open in IMG/M
3300000955	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300005328	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG	Host-Associated	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005334	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2	Host-Associated	Open in IMG/M
3300005347	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG	Host-Associated	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005545	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG	Environmental	Open in IMG/M
3300005549	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005843	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2	Host-Associated	Open in IMG/M
3300006038	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5	Host-Associated	Open in IMG/M
3300006353	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5	Host-Associated	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300009011	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG	Host-Associated	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012353	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_80_16 metaG	Environmental	Open in IMG/M
3300012500	Arabidopsis rhizosphere microbial communities from North Carolina - M.Col.4.old.080610	Host-Associated	Open in IMG/M
3300012532	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_80_16 metaG	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300014267	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNE_CattailC_D1	Environmental	Open in IMG/M
3300014968	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG	Host-Associated	Open in IMG/M
3300015200	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S209-509C-1 (version 2)	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300017933	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_1	Environmental	Open in IMG/M
3300018073	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_5_b1	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300025901	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes)	Host-Associated	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025919	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025923	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025937	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025945	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025986	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026067	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300027874	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes)	Environmental	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300028608	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Xylose_Day6	Environmental	Open in IMG/M
3300028719	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_182	Environmental	Open in IMG/M
3300028768	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_119	Environmental	Open in IMG/M
3300028814	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_183	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031544	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f26	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031546	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031681	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f20	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031768	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f22	Environmental	Open in IMG/M
3300031769	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f24	Environmental	Open in IMG/M
3300031770	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17	Environmental	Open in IMG/M
3300031777	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f24	Environmental	Open in IMG/M
3300031778	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f24	Environmental	Open in IMG/M
3300031780	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f21	Environmental	Open in IMG/M
3300031794	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f23	Environmental	Open in IMG/M
3300031795	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f19	Environmental	Open in IMG/M
3300031796	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f24	Environmental	Open in IMG/M
3300031797	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f23	Environmental	Open in IMG/M
3300031819	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f21	Environmental	Open in IMG/M
3300031835	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f21	Environmental	Open in IMG/M
3300031845	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f18	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300031959	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f24	Environmental	Open in IMG/M
3300032000	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D3	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032010	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f22	Environmental	Open in IMG/M
3300032051	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f26	Environmental	Open in IMG/M
3300032066	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f18	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032122	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D4	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M
3300033550	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day4	Environmental	Open in IMG/M
3300034147	Sediment microbial communities from East River floodplain, Colorado, United States - 44_j17	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
prs_06281810	2070309004	Green-Waste Compost	TVSSVPPADAAHRDALRDGAKALYRALNPRRNDKDDIAQMTPEEEVLLLHVME
ICCgaii200_06547141	2228664021	Soil	AHRDTLRDAAKALYRALDPARNDKDDLARMTPEEEVLLLHVME
INPhiseqgaiiFebDRAFT_1004508381	3300000364	Soil	YAAKALYRALDPARNDKDDLARMTPDDEVLLLHVME*
AP72_2010_repI_A001DRAFT_10726251	3300000893	Forest Soil	REGAKALYLALDPRSNDKADITRMTPEEEVLLLHVME*
JGI1027J12803_1058331591	3300000955	Soil	DAAHRDELRDGAKALYQALDPRSNDRADIARMSPEEEVLLLHVME*
Ga0070676_110909762	3300005328	Miscanthus Rhizosphere	PSDAVHRDMLRDAAKALYRALDPARNDKADLAGMTPEEEVLLLHVME*
Ga0066388_1011907144	3300005332	Tropical Forest Soil	HRDALREGAKALYQALNPRRNDKDDIAQMTPEEEVLLLHVME*
Ga0066388_1049732533	3300005332	Tropical Forest Soil	PADAAHRDALREAAKALYLALDPGGNDKADIAQMTPDEEVNLLHIME*
Ga0066388_1050090731	3300005332	Tropical Forest Soil	DAAHRDALRDAAQALYLALDPNSNDKVDLAQMTPEDEVRLLHVME*
Ga0066388_1071699232	3300005332	Tropical Forest Soil	VPPADAAHRDVLREGAEALYLALDPRSNDRADITRMTPEEEVLLLHVME*
Ga0066388_1075194802	3300005332	Tropical Forest Soil	SVPPADAAHRDVLREGAKALYLALDPRSNDKADITRMTPEEEVLLLHVME*
Ga0066388_1085505851	3300005332	Tropical Forest Soil	KTVSSVPPADAAHRDALREGAKALYQALNPRRNDKDDIAHMTPEEEVLLLHVME*
Ga0066388_1087277621	3300005332	Tropical Forest Soil	VSSVPPADAAHRDALREGAKALYQALNPRRNDKDDIAQMTPEDEVLLLHVME*
Ga0068869_1003060251	3300005334	Miscanthus Rhizosphere	PPSDAVHRDMLRDAAKALYRALDPARNDKADLAGMTPEEEVLLLHVME*
Ga0070668_1003247381	3300005347	Switchgrass Rhizosphere	KTVAAMPLSDAAHRDMLRDAAKALYRALDPARNDKTDLAGMTPEEEVLLLHVME*
Ga0070698_1006500071	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	DAAHRDALREAAKALYQALNPRRNDKDDIAQMTPEEEVLLLHVME*
Ga0070695_1003961663	3300005545	Corn, Switchgrass And Miscanthus Rhizosphere	LSDAAHRDMLRDAAKALYRALDPARNDKTDLAGMTPEEEVLLLHVME*
Ga0070704_1001266411	3300005549	Corn, Switchgrass And Miscanthus Rhizosphere	LAKTVASMPPSDAAHRDMLRDAAKALYRALDPARNDKADLAGMTPEEEVLLLHVME*
Ga0066905_1000549535	3300005713	Tropical Forest Soil	RDALRDGARMLYRALDPRRGDKEDLAQMSPDEEVALLHVME*
Ga0066903_1017008071	3300005764	Tropical Forest Soil	PADSAHRDALREGAKALYQALNPRRNDKDDIAQMTPEEEVLLLHVME*
Ga0066903_1061158471	3300005764	Tropical Forest Soil	GAQALYRALDPRRNDKDDIPRMTPDEEVLLPHVME*
Ga0068860_1023717852	3300005843	Switchgrass Rhizosphere	RDAAKALYRALEPARNDKTDLAGMTPEEEVLLLHVME*
Ga0075365_102014331	3300006038	Populus Endosphere	MPPSDAAHRDMLRDAAKALYRALEPARNDKTDLAGMTPEEEVLLLHVME*
Ga0075370_104177113	3300006353	Populus Endosphere	SQHVAVPLSDTAHRDMLRNAAKALYRALEPAGNDKADLAGMTPEQEVLLLHVME*
Ga0075421_1018085122	3300006845	Populus Rhizosphere	REAAKALYLALDAGTNDKTDLAQMTPDEEVALLHVME*
Ga0075434_1000789191	3300006871	Populus Rhizosphere	AVPPADAAHRDALRDAAKALYRALDPGRSDKDDLAQMTPDDEVLLLHVME*
Ga0075434_1020067682	3300006871	Populus Rhizosphere	ASVPPSDVAHRDMLRDAAKALYRALAPARNDKADLADMTPEEEVLLLHVME*
Ga0105251_102845163	3300009011	Switchgrass Rhizosphere	PADAAHRDALRDAAKALYRALDPGRSDKDDLAQMTPDDEVLLLHVME*
Ga0111539_104705443	3300009094	Populus Rhizosphere	VSSMPPADAAHRDALREAAKALYLALDPRRNDKVDLAQMNPDDEVRLLHVME*
Ga0126380_101518254	3300010043	Tropical Forest Soil	PPADAAHRDALRDGAKALYQALDPRRNDKDDIAQMTPEDEVLLLHVME*
Ga0126382_113662531	3300010047	Tropical Forest Soil	EGAKALYQALNPRRNDKDDIAQMTPEEEVLLLHVME*
Ga0126370_101569323	3300010358	Tropical Forest Soil	VPPADAAHRDALRDGAKALYQALNPRRNDKDDIAQMTPEEEVLLLHVME*
Ga0126370_109539951	3300010358	Tropical Forest Soil	MRRTVMRLREGAKSLYQALNPRRNDKDDIAQMTPEEQVLLLHVME*
Ga0126379_111754361	3300010366	Tropical Forest Soil	PADAAHRDELQDGAKALYQALDPRRNDKDDIAKMTPEEQVLLLHVME*
Ga0134128_115472431	3300010373	Terrestrial Soil	MPPSDAVHRDMLRDAAKALYRALDPARNDKADLAGMTPEEEVLLLHVME*
Ga0126381_1028182551	3300010376	Tropical Forest Soil	REGAKALYQALNPRRNDKDDIAQMTPEEEVLLLHVME*
Ga0136449_1025567741	3300010379	Peatlands Soil	SAIPADDASHRDALCDGAKALYQALAADPDDVAKMTPEDEVLLLHVIE*
Ga0137363_116297491	3300012202	Vadose Zone Soil	HRDALREASKALYRALNPRRNDKDDIAQMTPEEEVLLLHVME*
Ga0137363_116665161	3300012202	Vadose Zone Soil	GSKALYRALNPRRNDKDDIARMTPEEEVLLLHVME*
Ga0137367_104082163	3300012353	Vadose Zone Soil	EGARALYQALNPRRNDKDDIAQMTPEEEVLLLHVME*
Ga0157314_10446161	3300012500	Arabidopsis Rhizosphere	PADAAHRDALREAAKALYLALDPRPNDKADLAQMNPDDEVMLLHVME*
Ga0137373_108978791	3300012532	Vadose Zone Soil	LREGAKALYRALDPRRNDKEVIARMTPEEEVLLLHVME*
Ga0126375_112902031	3300012948	Tropical Forest Soil	CLPCRRPMPHTDALREGAKALYQALNSRRNDKADIAQMTPEEEVLLLHVME*
Ga0126369_103927901	3300012971	Tropical Forest Soil	AKALYQALNPRRNDKDDIAQMTPEEEVLLLHVME*
Ga0126369_128899791	3300012971	Tropical Forest Soil	DELRDGAQALYRALDPRRNDKDDIARMMPDEEVLLSHVME*
Ga0075313_10783842	3300014267	Natural And Restored Wetlands	LIQLREGAKALSLALDAGRNDKDDLARMTPDEEVMLLHVME*
Ga0157379_108066171	3300014968	Switchgrass Rhizosphere	SMPPSDAAHRDMLRDAAKALYRALDPARNDKADLAGMTPEEEVLLLHVME*
Ga0173480_111624061	3300015200	Soil	VASVPLSDTAHRDMLRDAAKTLCRALDPARNDKADLAGMTPEEEVLLLHVME*
Ga0132258_124819031	3300015371	Arabidopsis Rhizosphere	DALREAAKALYLALDPRPNDKADLAQMNPDDEVMLLHVME*
Ga0132257_1011385211	3300015373	Arabidopsis Rhizosphere	ADAAHRDALREAAKALYRALDPRPNDKADLAQMNPDDEVMLLHVME*
Ga0132255_1002320311	3300015374	Arabidopsis Rhizosphere	PADAAHRDALREAAKALYLALEPGRNDKANIAQMTPDEEVTLLHVME*
Ga0182041_122933032	3300016294	Soil	VSSVPPTDAAHRDALREGAKALYQALNLRHNDKDDIAQMTPEEEALLPHVME
Ga0182033_100726666	3300016319	Soil	DALREGAKALCDALLEKSDATQITPEEEVLLLHVME
Ga0182033_102688744	3300016319	Soil	SVPPADAAHRDELREGAEALYRALDPRRNDKKDMTPKEQVPCLHVME
Ga0182033_110003311	3300016319	Soil	KTVSSVPPADAAHRDALRDGAKALYRALNPRRNDKDDIAQMTPEEEVLLLHDME
Ga0182033_115734891	3300016319	Soil	DAAHRDALREGAKALYQALNPRRSDKDDIAQMTPEEEVLLLHVME
Ga0182034_104205451	3300016371	Soil	RDALLDGAKALYRALNPRRNGKDDIAQMTPEEEVLLLHVME
Ga0182040_101556891	3300016387	Soil	KTVSSVPPADAAHRDALREGAKALYRALNPRRNDKDDIAQMTPEEEVLLLHVME
Ga0182037_115147751	3300016404	Soil	AKTVSSVPPADAAHRDALREGAKALYQALNPRRNDKDDIAQMTPDEEVLLLHVME
Ga0182037_117570972	3300016404	Soil	SSVPPADAAHRDALREGAKALYQALNPRRNDKDDIAQMTPEEEVLLLHVME
Ga0182038_117860712	3300016445	Soil	VSSVPPADAAHRDALREGAKALYQALNLRHNDKDDIAQMTPEEEALLPHVME
Ga0187801_104213682	3300017933	Freshwater Sediment	RDLAKTAAAPLVADVAHREALREAAKALYLALACEDTTDIASLTPDEEVRLLHILE
Ga0184624_104454062	3300018073	Groundwater Sediment	AHRDTLRDAAKALYRALDPARNDKDDLARMKPEEEVLLLHVME
Ga0126371_124252201	3300021560	Tropical Forest Soil	HRDALREGAKVLYRALNPRRNDRDDIAQMTPEEEVLLLHVME
Ga0207688_102608691	3300025901	Corn, Switchgrass And Miscanthus Rhizosphere	RDMLRDAAKTLCRALDPARNDKADLAGMTPEEEVLLLHVME
Ga0207684_101061281	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	VPPADAAHRDALREAAKALYQALNPRRSDKDDIAQMTPEEEVLLLHVME
Ga0207657_101382715	3300025919	Corn Rhizosphere	MSARSALYRALAPARNDKADLADMTPEEEVLLLHVME
Ga0207646_106876563	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	RDALREAAKALYRALNPRGNDKDDIAQMTPEEEVLLLHVME
Ga0207681_102540181	3300025923	Switchgrass Rhizosphere	DMLRDAAKALYRALDPARNDKADLAGMTPEEEVLLLHVME
Ga0207669_102729961	3300025937	Miscanthus Rhizosphere	MLRDAAKTLCRALDPARNDKADLAGMTPEEEVLLLHVME
Ga0207679_114968371	3300025945	Corn Rhizosphere	VASVPLSDTAHRDMLRDAAKTLCRALDPARNDKADLAGMTPEEEVLLLHVME
Ga0207658_103294933	3300025986	Switchgrass Rhizosphere	AAKALYRALDPARNDKADLAGMTPEEEVLLLHVME
Ga0207678_113686431	3300026067	Corn Rhizosphere	SDTAHRDMLRDAAKTLCRALDPARNDKADLAGMTPEEEVLLLHVME
Ga0209465_102157803	3300027874	Tropical Forest Soil	DSAHRDALREGAKALYQALNPRRNDKDDIAQMTPEEEVLLLHVME
Ga0209465_104830412	3300027874	Tropical Forest Soil	PADAAHRDVLREGAKALYLALDPRSNDKADITRMTPEEEVLLLHVME
Ga0209382_109003461	3300027909	Populus Rhizosphere	LREAAKALYLALDAGTNDKTDLAQMTPDEEVALLHVME
Ga0247819_104124923	3300028608	Soil	KTVASMPPSDAVHRDMLRDAAKALYRALDPARNDKADLAGMTPEEEVLLLHVME
Ga0307301_102717201	3300028719	Soil	RDAAKALYRALDPARNDKTDLAGMTPEEEVLLLHVME
Ga0307280_103238121	3300028768	Soil	AAKALYRALDYARSDKDDPARMTPEGQALLLHVME
Ga0307302_104986462	3300028814	Soil	AHRDTLRDAARALYRALDPARNDKDDLARMKPEEEVLLLHVME
Ga0170824_1055873092	3300031231	Forest Soil	ASMPPSDAAHRDMLRDAAKALYRALDPARNDKADLAGMTPEEEVLLLHVME
Ga0318516_102660411	3300031543	Soil	HRDALRDGAKALYQALDPRRNDKNDIAQMTPEEEVLLLHVME
Ga0318534_105909561	3300031544	Soil	LAKTVSSVPPADAAHRDALREAAKALYQALNPRRNDKDDIAQMTPEEEVLLLHVME
Ga0318541_102059023	3300031545	Soil	TVSCVPPADAAHRDALREAAKALYRALNPRRNDKDDIAQMTPEEEVLLLHVME
Ga0318541_106785981	3300031545	Soil	GAKSLYQALNPRRSDKDDIAQMTPEEEVLLLHVME
Ga0318538_102013022	3300031546	Soil	VPPADAAHRDALREGAKALYRALNPRRNDRDDIAQMTPEEEVLLLYVME
Ga0310915_102724193	3300031573	Soil	RDGAKALYQALDPCRNDKNDIAHMTPEEEVLLLHVME
Ga0318572_100781183	3300031681	Soil	ADAAHRDALREGAKSLYQALNPRRSDKDDIAQMTPEEEVLLLHVME
Ga0318572_103052311	3300031681	Soil	ALRDGAKALYQALDPRRNDKDDIAQMTPEEEVLLLHVME
Ga0306918_109765791	3300031744	Soil	DALREGAKSLYQALNPRRSDKDDIAQMTPEEEVLLLHVME
Ga0318509_102572741	3300031768	Soil	RDGAKALYQALDPRRNDKNDIAQMTPEEEVLLLHVME
Ga0318526_104187362	3300031769	Soil	RDALRGGAKALYRALNPRRNDKDDIAQMTPEEEVLLLHVME
Ga0318521_101050761	3300031770	Soil	VPPADAAHRDALREGAKALYRALNPRRNDRDDIAQMTPEEEALLLYVME
Ga0318543_100573784	3300031777	Soil	SSVPPADAAHRDALRDGAKALYRALNPRRNDKDDIAQMTPEEEVLLLHDME
Ga0318498_101209903	3300031778	Soil	VSSVPPADAAHRDALRDGAKALYRALNPRRNDKDDIAQMTPEEEVLLLHDME
Ga0318508_10801303	3300031780	Soil	HRDALREGAKSLYQALNPRRSDKDDIAQMTPEEEVLLLHVME
Ga0318503_100027711	3300031794	Soil	AAHRDALREGAKSLYQALNPRRSDKDDIAQMTPEEEVLLLHVME
Ga0318557_101457861	3300031795	Soil	SSVPPADAAHRDALREGAKSLYQALNPRRSDKDDIAQMTPEEEVLLLHVME
Ga0318576_102265561	3300031796	Soil	LREGAKALYQALNPRRNDKDDIAQMTPEEEVLLLHVME
Ga0318550_100515981	3300031797	Soil	ANTVSSVPPADAAHRDTLREGAKALYQALNPRRNDKDDIAQITPEEEVLLLHVME
Ga0318568_108294632	3300031819	Soil	ALREAAKALYRALNPRRNDKDDIAQMTPEEEVLLLHVME
Ga0318517_101058841	3300031835	Soil	PPADAAHRDALRDGAKALYRALNPRRNDKDDIAQMTPEEEVLLLHDME
Ga0318511_100313061	3300031845	Soil	RGGAKALYRALNPRRNDKDDIAQMTPEEEVLLLHVME
Ga0306919_114168482	3300031879	Soil	VSSVPPADAAHRDALREGAKALYRALNPRRNDKDDIAQMTPEEEVLLLHVME
Ga0306925_110332651	3300031890	Soil	PADAAHRDALRDGAKALYQALNPRRNDKDDIAQMTPEEEVLLLHVME
Ga0306923_118444051	3300031910	Soil	NTVSSVPPADAAHRDTLREGAKALYQALNPRRNDKDDIAQITPEEEVLLLHVME
Ga0310912_109304232	3300031941	Soil	GAKALYQALDPRRNDKDDIAQMTPEEEVLLLHVME
Ga0310916_103783683	3300031942	Soil	TVSSVPPADAAHRDALREGAKALYRALNPRRNDKDDIAQMTPEEEVLLLHVME
Ga0310913_107160272	3300031945	Soil	REGAKSLYQALNPRRSDKDDIAQMTPEEEVLLLHVME
Ga0310910_104233671	3300031946	Soil	VPPADAAHRDALRDGAKALYRALNPRRNDKDDIAQMTPEEEVLLLHVME
Ga0310910_115567092	3300031946	Soil	KTVSSVPPADAAHRDELRDGAQALYRALDSRRNDKDDIPRMTPDEEVLFPHFME
Ga0310909_108080662	3300031947	Soil	ADAAHRDALREGAKALYQALNPRRNDKDDIAQMTPDEEVLLLHVME
Ga0306926_1001972511	3300031954	Soil	DALREGAKALYDALLEKSDASQMTPEEEVLLLHVME
Ga0306926_101678215	3300031954	Soil	TVSSVPPADAAHRDALREGAKALYQALNPRRNDKDDIAQMTPDEEVLLLHVME
Ga0306926_126215982	3300031954	Soil	ALRDGAKALYRALNPRRNDKDDIAQMTPEEEVLLLHVME
Ga0318530_101340023	3300031959	Soil	AKTVSSVPPADAAHRDALREAAKALYQALNPRRNDKDDIAQMTPEEEVLLLHVME
Ga0310903_105724771	3300032000	Soil	HRDMLRDAAKELYRALEPARNDKTDLAGMTPEEEVLLLHVME
Ga0306922_107800751	3300032001	Soil	ADAAHRDTLREGAKALYQALNPRRNDKDDIAQITPEEEVLLLHVME
Ga0318569_105096151	3300032010	Soil	AAHRDALREGAKALYQALNPRRNDKDDIAQMTPEEEVLLLHVME
Ga0318532_1000051410	3300032051	Soil	VPPADAAHRDALREGAKSLYQALNPRRSDKDDIAQMTPEEEVLLLHVME
Ga0318514_100246071	3300032066	Soil	ALRDGATALYRALNPRRNDKDDIAQMTPEEEVLLLHVME
Ga0306924_106711923	3300032076	Soil	PPADAAHRDALREGAKALYQALNPRRNDKDDIAQMTPEEEVLLLHVME
Ga0310895_102961261	3300032122	Soil	AAKALYRGLDTARNDKTDLAGMTPEEEVLLLHVME
Ga0311301_122454502	3300032160	Peatlands Soil	SAIPADDASHRDALCDGAKALYQALAADPDDVAKMTPEDEVLLLHVIE
Ga0306920_1002522505	3300032261	Soil	GAKALYRALNPRRNDKDDIAQMTPEEEVLLLHVME
Ga0306920_1004125865	3300032261	Soil	ALREGAKALYQALNPRRNDKDDIAQMTPDEEVLLLHVME
Ga0306920_1043930761	3300032261	Soil	LRDGAKALYQALDPCRNDKNDIAHMTPEEEVLLLHVME
Ga0310914_108024601	3300033289	Soil	AKTVSSVPPADAAHRDALREGAKALYQALNPRRNDKDDIAQMAPEEEVLLLHLME
Ga0310914_110695082	3300033289	Soil	GAKALYQALNPRRNDKDDIAQMTPEEEVLLLHVME
Ga0247829_112111201	3300033550	Soil	DAAHRDMLRDAAKALYRALDPARNDKADLAGMTPEEEVLLLHVME
Ga0364925_0282243_444_593	3300034147	Sediment	MPLSDAAHRDMLRDAAKALYRALDPARNDKTDLAGMTPEEEVLLLHVME

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F061898

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences