Metagenome / Metatranscriptome Family F061829

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F061829
Family Type	Metagenome / Metatranscriptome
Number of Sequences	131
Average Sequence Length	47 residues
Representative Sequence	VDTATARERLEEMRGQIDKSILVLQGEHPSGRAEVDSPQDPADAGT
Number of Associated Samples	106
Number of Associated Scaffolds	131

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	100.00 %
% of genes near scaffold ends (potentially truncated)	100.00 %
% of genes from short scaffolds (< 2000 bps)	95.42 %
Associated GOLD sequencing projects	103
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (68.702 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (48.855 % of family members)
Environment Ontology (ENVO)	Unclassified (63.359 % of family members)
Earth Microbiome Project Ontology (EMPO)	Unclassified (49.618 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 45.65% β-sheet: 0.00% Coil/Unstructured: 54.35%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 131 Family Scaffolds
PF02586	SRAP	83.21
PF00275	EPSP_synthase	9.92
PF03193	RsgA_GTPase	0.76

COG ID	Name	Functional Category	% Frequency in 131 Family Scaffolds
COG2135	ssDNA abasic site-binding protein YedK/HMCES, SRAP family	Replication, recombination and repair [L]	83.21
COG1162	Ribosome biogenesis GTPase RsgA	Translation, ribosomal structure and biogenesis [J]	0.76

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	68.70 %
All Organisms	root	All Organisms	31.30 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	68.70 %
cellular organisms	root	All Organisms → cellular organisms	31.30 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	68.70 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	31.30 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	68.70 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	30.53 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	68.70 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	29.77 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	68.70 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	20.61 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	68.70 %
Streptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	10.69 %
Streptomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales	2.29 %
Corynebacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	1.53 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	68.70 %
Thermomonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae	3.82 %
Streptosporangiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae	3.05 %
Streptomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	2.29 %
Nocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae	1.53 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	68.70 %
Thermomonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae	3.82 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	2.29 %
Rhodococcus	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Rhodococcus	1.53 %
Nonomuraea	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Nonomuraea	0.76 %
Thermobispora	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Thermobispora	0.76 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	68.70 %
Thermomonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae	3.82 %
unclassified Streptomyces	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces	2.29 %
Rhodococcus opacus	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Rhodococcus → Rhodococcus opacus	1.53 %
Thermobispora bispora	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Thermobispora → Thermobispora bispora	0.76 %
Nonomuraea pusilla	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Nonomuraea → Nonomuraea pusilla	0.76 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	68.70 %
Thermomonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae	3.82 %
Streptomyces sp. 5112.2	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces → Streptomyces sp. 5112.2	2.29 %
Rhodococcus opacus	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Rhodococcus → Rhodococcus opacus	1.53 %
Thermobispora bispora	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Thermobispora → Thermobispora bispora	0.76 %
Nonomuraea pusilla	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Nonomuraea → Nonomuraea pusilla	0.76 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.76 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000364\|INPhiseqgaiiFebDRAFT_100385592	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Rhodococcus → Rhodococcus opacus	616	Open in IMG/M
3300004267\|Ga0066396_10018667	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae	916	Open in IMG/M
3300004479\|Ga0062595_102663331	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	503	Open in IMG/M
3300005332\|Ga0066388_102132648	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Nonomuraea → Nonomuraea pusilla	1009	Open in IMG/M
3300005339\|Ga0070660_100923981	Not Available	736	Open in IMG/M
3300005436\|Ga0070713_101066302	Not Available	780	Open in IMG/M
3300005444\|Ga0070694_101310757	Not Available	609	Open in IMG/M
3300005538\|Ga0070731_10714472	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	666	Open in IMG/M
3300005556\|Ga0066707_10122777	Not Available	1621	Open in IMG/M
3300005618\|Ga0068864_101263135	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	738	Open in IMG/M
3300005764\|Ga0066903_101071465	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1482	Open in IMG/M
3300005764\|Ga0066903_107392235	Not Available	567	Open in IMG/M
3300006031\|Ga0066651_10390915	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae	743	Open in IMG/M
3300006574\|Ga0074056_11838687	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Thermobispora → Thermobispora bispora	719	Open in IMG/M
3300006580\|Ga0074049_12984599	Not Available	718	Open in IMG/M
3300006796\|Ga0066665_11164309	Not Available	588	Open in IMG/M
3300006804\|Ga0079221_11240331	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	582	Open in IMG/M
3300006854\|Ga0075425_100103419	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	3241	Open in IMG/M
3300006880\|Ga0075429_100188985	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1805	Open in IMG/M
3300009824\|Ga0116219_10357395	Not Available	818	Open in IMG/M
3300010046\|Ga0126384_10976378	Not Available	770	Open in IMG/M
3300010359\|Ga0126376_11891981	Not Available	636	Open in IMG/M
3300010360\|Ga0126372_11003576	Not Available	846	Open in IMG/M
3300012200\|Ga0137382_10265716	Not Available	1191	Open in IMG/M
3300012210\|Ga0137378_10449542	Not Available	1193	Open in IMG/M
3300012211\|Ga0137377_10271523	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1627	Open in IMG/M
3300012930\|Ga0137407_12368630	Not Available	507	Open in IMG/M
3300012971\|Ga0126369_11823893	Not Available	697	Open in IMG/M
3300012971\|Ga0126369_12626141	Not Available	588	Open in IMG/M
3300013307\|Ga0157372_11289905	Not Available	843	Open in IMG/M
3300015245\|Ga0137409_10820217	All Organisms → cellular organisms → Bacteria	765	Open in IMG/M
3300015374\|Ga0132255_105576291	Not Available	533	Open in IMG/M
3300016270\|Ga0182036_10326613	Not Available	1175	Open in IMG/M
3300016294\|Ga0182041_10198191	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1596	Open in IMG/M
3300016341\|Ga0182035_10134343	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae	1873	Open in IMG/M
3300016357\|Ga0182032_10304463	Not Available	1260	Open in IMG/M
3300016357\|Ga0182032_11132753	Not Available	672	Open in IMG/M
3300016371\|Ga0182034_11926121	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	522	Open in IMG/M
3300016387\|Ga0182040_10521143	Not Available	952	Open in IMG/M
3300016445\|Ga0182038_10459532	Not Available	1079	Open in IMG/M
3300019890\|Ga0193728_1287928	Not Available	633	Open in IMG/M
3300025898\|Ga0207692_10769572	Not Available	628	Open in IMG/M
3300025922\|Ga0207646_10197145	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1818	Open in IMG/M
3300025942\|Ga0207689_11528799	Not Available	557	Open in IMG/M
3300026341\|Ga0257151_1039243	Not Available	513	Open in IMG/M
3300027646\|Ga0209466_1066605	Not Available	726	Open in IMG/M
3300027787\|Ga0209074_10145298	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces → Streptomyces sp. 5112.2	848	Open in IMG/M
3300028715\|Ga0307313_10166232	Not Available	682	Open in IMG/M
3300028768\|Ga0307280_10164837	Not Available	771	Open in IMG/M
3300028807\|Ga0307305_10048366	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae	1959	Open in IMG/M
3300028824\|Ga0307310_10507096	Not Available	608	Open in IMG/M
3300028881\|Ga0307277_10085286	Not Available	1326	Open in IMG/M
3300028884\|Ga0307308_10367252	Not Available	689	Open in IMG/M
3300028906\|Ga0308309_10423062	Not Available	1145	Open in IMG/M
3300031090\|Ga0265760_10117943	Not Available	850	Open in IMG/M
3300031200\|Ga0307496_10136233	Not Available	512	Open in IMG/M
3300031543\|Ga0318516_10040335	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	2507	Open in IMG/M
3300031543\|Ga0318516_10480933	Not Available	713	Open in IMG/M
3300031543\|Ga0318516_10824213	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	523	Open in IMG/M
3300031545\|Ga0318541_10390065	Not Available	778	Open in IMG/M
3300031561\|Ga0318528_10747064	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	523	Open in IMG/M
3300031572\|Ga0318515_10235523	Not Available	982	Open in IMG/M
3300031573\|Ga0310915_10692096	Not Available	720	Open in IMG/M
3300031640\|Ga0318555_10548662	Not Available	626	Open in IMG/M
3300031640\|Ga0318555_10596089	Not Available	598	Open in IMG/M
3300031679\|Ga0318561_10664622	Not Available	573	Open in IMG/M
3300031680\|Ga0318574_10559226	Not Available	670	Open in IMG/M
3300031681\|Ga0318572_10107102	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1584	Open in IMG/M
3300031713\|Ga0318496_10739157	Not Available	542	Open in IMG/M
3300031723\|Ga0318493_10042651	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2115	Open in IMG/M
3300031736\|Ga0318501_10613588	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Rhodococcus → Rhodococcus opacus	597	Open in IMG/M
3300031736\|Ga0318501_10728104	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	547	Open in IMG/M
3300031744\|Ga0306918_10805412	Not Available	733	Open in IMG/M
3300031747\|Ga0318502_10648625	Not Available	637	Open in IMG/M
3300031747\|Ga0318502_10875863	Not Available	545	Open in IMG/M
3300031763\|Ga0318537_10167685	Not Available	818	Open in IMG/M
3300031768\|Ga0318509_10472887	Not Available	701	Open in IMG/M
3300031769\|Ga0318526_10247178	Not Available	730	Open in IMG/M
3300031780\|Ga0318508_1199605	Not Available	573	Open in IMG/M
3300031781\|Ga0318547_10322733	Not Available	940	Open in IMG/M
3300031793\|Ga0318548_10302471	Not Available	786	Open in IMG/M
3300031796\|Ga0318576_10185212	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces → Streptomyces sp. 5112.2	978	Open in IMG/M
3300031798\|Ga0318523_10613250	Not Available	535	Open in IMG/M
3300031805\|Ga0318497_10351459	Not Available	823	Open in IMG/M
3300031819\|Ga0318568_10557609	Not Available	714	Open in IMG/M
3300031821\|Ga0318567_10442119	Not Available	737	Open in IMG/M
3300031831\|Ga0318564_10231716	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces → Streptomyces sp. 5112.2	820	Open in IMG/M
3300031832\|Ga0318499_10033491	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae	1865	Open in IMG/M
3300031832\|Ga0318499_10142124	Not Available	935	Open in IMG/M
3300031832\|Ga0318499_10228705	Not Available	724	Open in IMG/M
3300031846\|Ga0318512_10061768	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1696	Open in IMG/M
3300031860\|Ga0318495_10264652	Not Available	768	Open in IMG/M
3300031879\|Ga0306919_10430167	Not Available	1014	Open in IMG/M
3300031879\|Ga0306919_10765908	Not Available	742	Open in IMG/M
3300031890\|Ga0306925_10246497	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1925	Open in IMG/M
3300031896\|Ga0318551_10736102	Not Available	572	Open in IMG/M
3300031897\|Ga0318520_10077604	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1817	Open in IMG/M
3300031897\|Ga0318520_10922972	Not Available	550	Open in IMG/M
3300031947\|Ga0310909_10408187	Not Available	1140	Open in IMG/M
3300031954\|Ga0306926_12168244	Not Available	620	Open in IMG/M
3300031954\|Ga0306926_12772007	Not Available	530	Open in IMG/M
3300031981\|Ga0318531_10362404	Not Available	655	Open in IMG/M
3300032001\|Ga0306922_10083265	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae	3362	Open in IMG/M
3300032001\|Ga0306922_10880295	Not Available	931	Open in IMG/M
3300032001\|Ga0306922_11798789	Not Available	603	Open in IMG/M
3300032001\|Ga0306922_12228533	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	527	Open in IMG/M
3300032009\|Ga0318563_10007468	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae	4998	Open in IMG/M
3300032009\|Ga0318563_10381380	Not Available	763	Open in IMG/M
3300032010\|Ga0318569_10100782	Not Available	1305	Open in IMG/M
3300032010\|Ga0318569_10385370	Not Available	653	Open in IMG/M
3300032039\|Ga0318559_10140140	Not Available	1094	Open in IMG/M
3300032041\|Ga0318549_10080202	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1397	Open in IMG/M
3300032041\|Ga0318549_10284751	Not Available	744	Open in IMG/M
3300032052\|Ga0318506_10141293	Not Available	1050	Open in IMG/M
3300032054\|Ga0318570_10433884	Not Available	599	Open in IMG/M
3300032054\|Ga0318570_10490946	Not Available	560	Open in IMG/M
3300032059\|Ga0318533_10207898	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1404	Open in IMG/M
3300032059\|Ga0318533_11081732	Not Available	588	Open in IMG/M
3300032060\|Ga0318505_10072955	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1516	Open in IMG/M
3300032060\|Ga0318505_10286367	Not Available	777	Open in IMG/M
3300032060\|Ga0318505_10413747	Not Available	637	Open in IMG/M
3300032060\|Ga0318505_10457356	Not Available	603	Open in IMG/M
3300032064\|Ga0318510_10221512	Not Available	770	Open in IMG/M
3300032067\|Ga0318524_10041673	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2159	Open in IMG/M
3300032068\|Ga0318553_10473779	Not Available	656	Open in IMG/M
3300032076\|Ga0306924_10544921	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1317	Open in IMG/M
3300032076\|Ga0306924_11080528	Not Available	876	Open in IMG/M
3300032089\|Ga0318525_10283738	Not Available	851	Open in IMG/M
3300032091\|Ga0318577_10119703	Not Available	1242	Open in IMG/M
3300033289\|Ga0310914_10345663	Not Available	1345	Open in IMG/M
3300033290\|Ga0318519_10713781	Not Available	613	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	94.66%
Host-Associated	Host-Associated	5.34%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	94.66%
Plants	Host-Associated → Plants	5.34%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	94.66%
Rhizosphere	Host-Associated → Plants → Rhizosphere	3.05%
Rhizoplane	Host-Associated → Plants → Rhizoplane	2.29%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	87.02%
Loam	Environmental → Terrestrial → Soil → Loam	7.63%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	2.29%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	1.53%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.76%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.76%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	64.12%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	17.56%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	4.58%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	3.05%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	3.05%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	2.29%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	2.29%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	1.53%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.76%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.76%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	48.85%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	15.27%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	6.87%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	3.82%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	3.82%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	3.82%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	3.05%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.05%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.53%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.53%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	1.53%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.76%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	0.76%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.76%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	0.76%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.76%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.76%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.76%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.76%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.76%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300004267	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 6 MoBio	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005339	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG	Host-Associated	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005444	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG	Environmental	Open in IMG/M
3300005538	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1	Environmental	Open in IMG/M
3300005556	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156	Environmental	Open in IMG/M
3300005618	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2	Host-Associated	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006031	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Angelo_100	Environmental	Open in IMG/M
3300006574	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHAA (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006580	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLPC (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300006804	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200	Environmental	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006880	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3	Host-Associated	Open in IMG/M
3300009824	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_6_BS metaG	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300013307	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG	Host-Associated	Open in IMG/M
3300015245	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300019890	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1c1	Environmental	Open in IMG/M
3300025898	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025942	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026341	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DL-17-A	Environmental	Open in IMG/M
3300027646	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 30 MoBio (SPAdes)	Environmental	Open in IMG/M
3300027787	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter (SPAdes)	Environmental	Open in IMG/M
3300028715	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_203	Environmental	Open in IMG/M
3300028768	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_119	Environmental	Open in IMG/M
3300028807	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_186	Environmental	Open in IMG/M
3300028824	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_197	Environmental	Open in IMG/M
3300028881	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_116	Environmental	Open in IMG/M
3300028884	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_195	Environmental	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300031090	Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031200	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 9_S	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031561	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f26	Environmental	Open in IMG/M
3300031572	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f19	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031640	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f23	Environmental	Open in IMG/M
3300031679	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f23	Environmental	Open in IMG/M
3300031680	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f22	Environmental	Open in IMG/M
3300031681	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f20	Environmental	Open in IMG/M
3300031713	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f22	Environmental	Open in IMG/M
3300031723	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f23	Environmental	Open in IMG/M
3300031736	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f21	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031747	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f22	Environmental	Open in IMG/M
3300031763	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f29	Environmental	Open in IMG/M
3300031768	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f22	Environmental	Open in IMG/M
3300031769	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f24	Environmental	Open in IMG/M
3300031780	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f21	Environmental	Open in IMG/M
3300031781	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20	Environmental	Open in IMG/M
3300031793	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f21	Environmental	Open in IMG/M
3300031796	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f24	Environmental	Open in IMG/M
3300031798	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f19	Environmental	Open in IMG/M
3300031805	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f23	Environmental	Open in IMG/M
3300031819	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f21	Environmental	Open in IMG/M
3300031821	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f20	Environmental	Open in IMG/M
3300031831	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f20	Environmental	Open in IMG/M
3300031832	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f25	Environmental	Open in IMG/M
3300031846	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f19	Environmental	Open in IMG/M
3300031860	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f25	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031896	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f19	Environmental	Open in IMG/M
3300031897	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300031981	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f25	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032009	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f19	Environmental	Open in IMG/M
3300032010	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f22	Environmental	Open in IMG/M
3300032039	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f21	Environmental	Open in IMG/M
3300032041	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f22	Environmental	Open in IMG/M
3300032052	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f19	Environmental	Open in IMG/M
3300032054	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f23	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032060	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f18	Environmental	Open in IMG/M
3300032064	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f17	Environmental	Open in IMG/M
3300032067	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f22	Environmental	Open in IMG/M
3300032068	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f21	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032089	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f23	Environmental	Open in IMG/M
3300032091	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f25	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M
3300033290	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f15	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
INPhiseqgaiiFebDRAFT_1003855922	3300000364	Soil	VDTATARERLEEMRGQIDRSILVLXGEHPAGRAEVDSPQDPADAG
Ga0066396_100186671	3300004267	Tropical Forest Soil	VDTATARERLEEMRGQIDRSIVVLQGEHPTGRADVDSPQDPAD
Ga0062595_1026633311	3300004479	Soil	VDTATARERLEEMRGQIDRSILVLRGEHPAGRAEVDSPQDPAD
Ga0066388_1021326481	3300005332	Tropical Forest Soil	VDTVTARERLEEMRGQIEQSILVLQGEHPAGRAEVDSPQDPADAGTTLSE
Ga0070660_1009239811	3300005339	Corn Rhizosphere	VDTDTARKRLEEMRGELDKSITVLQGEQPAERIGSDSPQDPADAGTNLSENDR
Ga0070713_1010663021	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	VETSTVRKRLEEACHELDKSIEVLRGEKPAVSGRDFPQDPADAGTNLSEDD
Ga0070694_1013107572	3300005444	Corn, Switchgrass And Miscanthus Rhizosphere	VDTVTARKRLEEMRGELDKSIMVLQGEQPAERGGSDSPQDPADAGTNLSENDRTQAVLAAAKVQL
Ga0070731_107144722	3300005538	Surface Soil	VDTAIARERLEEMRGQIDRSILVLQGEHPSGRATIDSPQDP
Ga0066707_101227771	3300005556	Soil	VDTDTARKRLEEMRGELDKSITVLQGEQPADRIGSDSPQDPADAGTNLSENDRTQAVLEAAKVQLR
Ga0068864_1012631351	3300005618	Switchgrass Rhizosphere	VETSTVRKRLEEACHELDKSIEVLRGEKPAVSGRDFPQDPADAGTNL
Ga0066903_1010714651	3300005764	Tropical Forest Soil	VDTATARKRLEEMRGELDNSIAVLQGEQPMDRAGTDSPQDPADAGTNLSENDR
Ga0066903_1073922351	3300005764	Tropical Forest Soil	VDTDTARKRLEEMRGELDKSITVLQGEQPAERIGS
Ga0066651_103909152	3300006031	Soil	VDTVTARKRLEEMRGELDKSITVLQGEQPAERIGSDSPQDPADAGTNLSEND
Ga0074056_118386871	3300006574	Soil	VDTDTARKRLEEMCGELDKSITVLQGEQPAERIGSD
Ga0074049_129845992	3300006580	Soil	VDTDTARKRLEEMRGELDKSITVLQGEQPAERIGSDSPQD
Ga0066665_111643092	3300006796	Soil	VDTDTARKRLDEMRGELDKSITVLQGEQPAERTGSDSP
Ga0079221_112403311	3300006804	Agricultural Soil	VETSTVRKRLEEACHELDKSIEVLRGEKPAVSGRDFPQDPADAGTNLS
Ga0075425_1001034194	3300006854	Populus Rhizosphere	VDTVTARKRLEEMRGELDKSIMVLQGEQPAERGGSDSPQDPADAGTNLSEND
Ga0075429_1001889853	3300006880	Populus Rhizosphere	VDTVTARKRLEEMRGELDKSIMVLQGEQPAERGGSDSPQDPADAG
Ga0116219_103573951	3300009824	Peatlands Soil	MDTMTARKRLEEIRDQLDKSIMVLHRVQQPAELSAE
Ga0126384_109763781	3300010046	Tropical Forest Soil	VDTATARKRLEEIRGELDKSITVLQGEQPAERIGSDSPQDPADAGTNLSETDRTQ
Ga0126376_118919811	3300010359	Tropical Forest Soil	VDTATARKRLEEMRGELDKSILVLQAEQPVERIGSDSPQDPADAGTNLSENDR
Ga0126372_110035761	3300010360	Tropical Forest Soil	VDTDTARKRLEEMRGELDKSITVLQGEQPAERIGSD
Ga0137382_102657162	3300012200	Vadose Zone Soil	VDTATARERLEEMRGQIDRSILVLQGEHPSGRATTDS
Ga0137378_104495422	3300012210	Vadose Zone Soil	VDTATARVRLEEMRGQIDRSILVLQGEHPSGRVVSDSPQDPADAGSTLSETDRT
Ga0137377_102715231	3300012211	Vadose Zone Soil	VDTATARVRLEEMRGQIDRSILVLQGEHPSARAAVDSPQDPADAG
Ga0137407_123686301	3300012930	Vadose Zone Soil	VDTDTARKRLEEMRGELDKSITVLQGEQPADRIGSDSPQDPADAGTNLS
Ga0126369_118238931	3300012971	Tropical Forest Soil	VDTDTARKRLEEMRGELDKSITVLQGKQPAERIGSDSPQDPADAGTNLSENDRTQAVLEAAKG
Ga0126369_126261412	3300012971	Tropical Forest Soil	VDTDTARKRLEEMRGELDKSITVLQGEQPAERIGSDSPQDPADAG
Ga0157372_112899051	3300013307	Corn Rhizosphere	VDTDTARKRLEEMRGELDKSITVLQGEQPAERIGSDSPQDPADA
Ga0137409_108202171	3300015245	Vadose Zone Soil	VDTDTARKRLEEMRGELDKSITVLQGEQPADRIGSDSPQDPADAGTNLSENDRTQAVL
Ga0132255_1055762912	3300015374	Arabidopsis Rhizosphere	VDTVTARKRLEEMRGELDKSIMVLQGEQPAERGGSDSPQDPADAGTNLSENDRMQAVLAAAKV
Ga0182036_103266132	3300016270	Soil	VDTATVRKRLEEMCVEIDKSILVLRGEHPAGREGSDSPQDP
Ga0182041_101981911	3300016294	Soil	MDTAIARQRLEEMRGERDRSITVLQGEQTAGQGGADSPQDPADVGTNLSESDRVQAVLAAARQQL
Ga0182035_101343433	3300016341	Soil	VDTATARERLEEMRGQIDKSILVLQGEHPSGRGEVDSPQDPA
Ga0182032_103044631	3300016357	Soil	VDTVTARERLEEMRGQIDRSILVLQGEHPSGRAATDSPQDPAD
Ga0182032_111327532	3300016357	Soil	VDTATARERLEEMRGQIDRSILVLQGEHPSGRAEVDSPQDPADAGTTLSETD
Ga0182034_119261212	3300016371	Soil	VDTATARDRLEEMRGQIERSILVLQGEHPSGRAEVDSPQDPADAGTTLSETDRTEA
Ga0182040_105211432	3300016387	Soil	VDTATTRKRLEEMCGELDNSILVLRGEQPAGRAGSDSPQDPADA
Ga0182038_104595322	3300016445	Soil	VNTATARKRLEEMCVEIDKSILVLRGEHPAGREGSDSP
Ga0193728_12879283	3300019890	Soil	VDTDTARKRLEEMRGELDKSITVLQGEQPAERIGSDSPQDPADAGTNLSEN
Ga0207692_107695721	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	VDTDTARKRLEEMRGELDKSITVLQGEQPAERIGSDSPQDPADAGSNLSENDRTQ
Ga0207646_101971451	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	VDTAIARERLEEMRGQIDRSILVLQGEHPSGRAANDSPQDPADAGTTLSETD
Ga0207689_115287991	3300025942	Miscanthus Rhizosphere	VDTDTARKRLEEMRGELDKSITVLQGEQPAERIGSDSPQDPAISRA
Ga0257151_10392431	3300026341	Soil	VDTDTARKRLEEMRGELDKSITVLQGEQPADRIGSDSPQDP
Ga0209466_10666051	3300027646	Tropical Forest Soil	VDTATARKRLEEMRGELDKSILVLQGEQPAERIGMDSPQDPADAGTN
Ga0209074_101452981	3300027787	Agricultural Soil	VDTATARERLEEMRGQIDRSILVLRGEHPAGRAEVDSPQDPADA
Ga0307313_101662321	3300028715	Soil	VDTVTARKRLEEMRGELDKSIMVLQGEQPAERGGSDSPQDPADAGTNLSENDRTQAVLAAAKVQLRAVQ
Ga0307280_101648371	3300028768	Soil	VDTDTARKRLEEMRGELDKSITVLQGEQPAERIGSDSPQDPADAGTNLSENDRTQAVL
Ga0307305_100483663	3300028807	Soil	VDTVTARKRLEEMRGELDKSIMVLQGEQPAERGGS
Ga0307310_105070961	3300028824	Soil	VDTVTARKRLEEMRGELDKSITVLQGEQPAERIGSDSPQDPADAGTNLSENDRTQAVLEA
Ga0307277_100852861	3300028881	Soil	VDTVTARKRLEEMRGELDKSIMVLQGEQPAERGGSDSPQDPADAGTNLSENDRTQAVL
Ga0307308_103672521	3300028884	Soil	VDTATARKRLEEIRGELDKSITVLQGEQPTERAGSDSPQDPADAGTNL
Ga0308309_104230622	3300028906	Soil	VDTAIARERLEEMRGQIDRSIMVLQGEHPSGRVAEDSPQDPADAGTTLSETDRT
Ga0265760_101179432	3300031090	Soil	VDTVTARVRLEEMRGQIDRSIMVLEGEHPTGRAAADSPQDP
Ga0307496_101362331	3300031200	Soil	VDTDTARKRLEEMRGELDKSITVLQGEQPADRIGSDSPQDPADAGTNLSENDRTQAVLEAAKV
Ga0318516_100403353	3300031543	Soil	VDTATARKRLEEMCVEIDKSILVLRGEHPAGRESSDSPQDPADAG
Ga0318516_104809331	3300031543	Soil	VDTATARDRLEEMRGQIERSILVLQGEHPSGRAEVDSPQDPADAGTTLS
Ga0318516_108242132	3300031543	Soil	VDTVTARERLEEMRGQIDKSILVLQGEHPSGRAEVDSPQDPADAGT
Ga0318541_103900651	3300031545	Soil	MDTAIARQRLEEMRGELDRSITVLQGEQTAGQGGADSPQDPADVGTNL
Ga0318528_107470641	3300031561	Soil	VDTATARERLEEMRGQIDKSILVLQGEHPSGRAEVDTPQDP
Ga0318515_102355232	3300031572	Soil	VDTVTARERLEEMRGQIDRSILVLQGEHPSGRASSDSPQDPADAGTTL
Ga0310915_106920961	3300031573	Soil	VDTVTARERLEELRGQIERSILVLQGEHPSGRAEVDSPQDPADAGTTLSETDRTEA
Ga0318555_105486621	3300031640	Soil	VDTVIARERLEEMRGQIDRSILVLQGEHPSGRASIDSPQDPADAGTTLSETDRTE
Ga0318555_105960892	3300031640	Soil	VDTVTARERLEELRGQIERSILVLQGEHPSGRAEVDSPQDPADAGTTLSETDRT
Ga0318561_106646221	3300031679	Soil	VDTATARKRLEEMCGELDNSILVLRGEQPAGRAGSDSPQDPADAGTTLSETDRTEAILAAAGS
Ga0318574_105592261	3300031680	Soil	VDTATARERLEEMRGQIDRSILVLQGEHPAGRAEVDSPQDP
Ga0318572_101071021	3300031681	Soil	VDTDTATKRLEEMRGELDKSIAVLQGEQPAERIGS
Ga0318496_107391571	3300031713	Soil	VDTVIARERLEEMRGQIDRSILVLQGEHPSGRASIDSPQDPAD
Ga0318493_100426513	3300031723	Soil	VDTVTARERLEEMRGQIDKSILVLQGEHPSGRAEVDSPQDPADA
Ga0318501_106135881	3300031736	Soil	VDTATARERLEEMRGQIDRSILVLQGEHPAGRAEVDSPQDPADAG
Ga0318501_107281042	3300031736	Soil	VDTATARERLEEMRGQIDKSILVLQGEHPSGRAEVDSPQDPADAGTTLSE
Ga0306918_108054122	3300031744	Soil	VDTATARERLEEMRGQIDRSILVLQGEHPSGRAEVDSPQDPADAGTTLSET
Ga0318502_106486251	3300031747	Soil	VDTVTARKRLEEMCVEIDKSILVLRGEHPAAREGSDSPQDPADAGTTLSE
Ga0318502_108758632	3300031747	Soil	VDTATARERLEEMRGQIERSILVLQGEHPSGRAEVDSPQDPADAGTTL
Ga0318537_101676852	3300031763	Soil	VDTVTARERLEEMRGQIDKSILVLQGEHPSGRAEVDSPQDPADAG
Ga0318509_104728871	3300031768	Soil	VDTATARERLEEMRGQIDRSILVLQGEHPSGRASADSPQD
Ga0318526_102471782	3300031769	Soil	VDTATVRKRLEEMCVEIDKSILVLRGEHPAAREGSDSPQD
Ga0318508_11996052	3300031780	Soil	MDTAIARQRLEEMRGELDRSITVLQGEQTAGQGGADSPQDPADVGTNLSESDRVQA
Ga0318547_103227331	3300031781	Soil	VDTVTARERLEELRGQIERSILVLQGEHPSGRAEVD
Ga0318548_103024711	3300031793	Soil	VDTATARERLEEMRGQIDKSILVLQGEHPSGRAEVDSPQDPADAGP
Ga0318576_101852122	3300031796	Soil	VDTVTARERLEEMRGQIDRSILVLQGEHPSGRAATDSPQDPADAGT
Ga0318523_106132502	3300031798	Soil	VDTATARERLEEMRGQIDKSILVLQGEHPSGRAEVDSPQD
Ga0318497_103514592	3300031805	Soil	MDTAIARQRLEEMRGELDRSITVLQGEQTAGQAGADSPQDPADVGTN
Ga0318568_105576091	3300031819	Soil	VDTATVRKRLEEMCVEIDKSILVLRGEHPAGREGSDSPQDPADAGTTLSE
Ga0318567_104421191	3300031821	Soil	VDTATARKRLEEMCGELDNSILVLRGEQPAGRAGSDSPQDPADAGTTLSE
Ga0318564_102317162	3300031831	Soil	VDTVTARERLEELRGQIERSILVLQGEHPSGRAEVDSPQDPADAG
Ga0318499_100334911	3300031832	Soil	VDTVTARERLEELRGQIERSILVLQGEHPSGRAEVDSPQDPADAGTTLS
Ga0318499_101421241	3300031832	Soil	VDTATARERLEEMRGQIDKSILVLQGEHPSGRAEVD
Ga0318499_102287052	3300031832	Soil	VDTATARDRLEEMRGQIERSILVLQGEHPSGRAEVDSPQDPADAGTTLSETDRTE
Ga0318512_100617684	3300031846	Soil	VDTVTARERLEEMRGQIDRSILVLQGEHPSGRAATDSPQ
Ga0318495_102646522	3300031860	Soil	VDTATARERLEEIRGQIDRSILVLQGEHPAGRAEVDSPQDPADAG
Ga0306919_104301672	3300031879	Soil	VDTVTARERLEEMRGQIDKSILVLQGEHPSGRAEVDSPQDPAD
Ga0306919_107659081	3300031879	Soil	VDTAIARERLEEMRGQIDRSILVLQGEHPSGRATSDSPQDPADA
Ga0306925_102464973	3300031890	Soil	VDTATARKRLEEMRGELDKSIAVLQGEHPMEREGSD
Ga0318551_107361022	3300031896	Soil	VNTATARKRLEEMCVEIDKSILVLRGEHPAGREGSDSPQDPADAGTT
Ga0318520_100776041	3300031897	Soil	VDTVTARERLEEMRGQIDRSILVLQGEHPSGRAATDSPQDPADAG
Ga0318520_109229722	3300031897	Soil	VDTAIARKRLEEMRGEIDKSILVLRGEQPAGRGEMDSP
Ga0310909_104081872	3300031947	Soil	VDTVTARERLEEMRGQIDKSILVLQGEHPSGRAEVDSPQDPADAGTTLSE
Ga0306926_121682442	3300031954	Soil	VDTATVRKRLEEMCVEIDKSILVLRGEHPAGREGSDSPQDPADA
Ga0306926_127720072	3300031954	Soil	VDTVIARERLEEMRGQIDRSILVLQGEHPSGRASIDSPQDPADAGTTLSETD
Ga0318531_103624042	3300031981	Soil	VDTVTARERLEEMRGQIDKSILVLQGEHPSGRAEVDSPQDPADAGTTLSETDRT
Ga0306922_100832654	3300032001	Soil	VDTVTARERLEEMRGQIDRSILVLQGEHPSGRAATDSPQDPADAGTTLSET
Ga0306922_108802951	3300032001	Soil	VDTATARKRLEEMCGELDNSILVLRGEQPAGRAGSDS
Ga0306922_117987891	3300032001	Soil	VDTVTARERLEELRGQIERSILVLQGEHPSGRAEVDSPQDPADAGT
Ga0306922_122285332	3300032001	Soil	VDTATARDRLEEMRGQIERSILVLQGEHPSGRAEVDSPQDPADAGTT
Ga0318563_100074686	3300032009	Soil	VDTATARERLEEMRGQIDRSILVLQGEHPSGRASADSPQDPADAGTT
Ga0318563_103813802	3300032009	Soil	VDTAIARKRLEEMRGEIDKSILVLRGEQPAGRGEIDSPQDPADAGTTLS
Ga0318569_101007822	3300032010	Soil	VDTATVRKRLEEMCVEIDKSILVLRGEHPAGREGSDSPQDPADAGTTLSET
Ga0318569_103853702	3300032010	Soil	VDTVTARERLEELRGQIERSILVLQGEHPSGRAEVDSPQDPADAGTT
Ga0318559_101401401	3300032039	Soil	VDTVIARERLEEMRGQIDRSILVLQGEHPSGRASIDSPQDPA
Ga0318549_100802021	3300032041	Soil	VDTATARERLEEMRGQIDRSILVLQGEHPAGRAEVDSPQDPADAGTTLSE
Ga0318549_102847511	3300032041	Soil	VDTVTARERLEEMRGQIDKSILVLQGEHPSGRAEVD
Ga0318506_101412931	3300032052	Soil	VDTATARERLEEMRGQIDKSILVLQGEHPSGRGEVDSPQDPADAGTTLSE
Ga0318570_104338841	3300032054	Soil	VDTVTARERLEELRGQIERSILVLQGEHPSGRAEVDSPQDPADAGTTLSET
Ga0318570_104909462	3300032054	Soil	VNTATARKRLEEMCVEIDKSILVLRGEHPAGREGSDSPQDPADAGTTLSE
Ga0318533_102078981	3300032059	Soil	VDTATARERLEEMRGQIDRSILVLQGEHPAGRAEVDSPQ
Ga0318533_110817322	3300032059	Soil	VDTVTARERLEEMRGQIDRSILVLQGEHPSGRAATDSPQDPADAGTT
Ga0318505_100729554	3300032060	Soil	VDTATARERLEEMRGQIDRSILVLQGEHPSGRASADSPQDPADAG
Ga0318505_102863672	3300032060	Soil	VDTAIARERLEEMRGQIDRSILVLQGEHPSGRATSDSPQDPADAGTTLSE
Ga0318505_104137471	3300032060	Soil	VDTATARERLEEMRGQIDRSILVLQGEHPAGRAEVDSPQDPADAGTTLSEKDR
Ga0318505_104573562	3300032060	Soil	VDTVTARERLEELRGQIERSILVLQGEHPSGRAEVDS
Ga0318510_102215121	3300032064	Soil	VDTVTARERLEEMRGQIDRSILVLQGEHPSGRAATDSPQDPADAGTTL
Ga0318524_100416731	3300032067	Soil	VDTATARERLEEMRGQIDRSILVLQGEHPAGRAEVDSPQDPADAGTTLSEKDRSE
Ga0318553_104737792	3300032068	Soil	VDTAIARKRLEEMRGEIDKSILVLRGEQPAGRGEIDSPQ
Ga0306924_105449213	3300032076	Soil	VDTATARERLEEMRGQIDRSILVLQGEHPAGRAEVDSPQDPADAGTTLS
Ga0306924_110805281	3300032076	Soil	VDTATARKRLEEMCVEIDKSILVLRGEHPAGREGSDSP
Ga0318525_102837382	3300032089	Soil	VDTATVRKRLEEMCVEIDKSILVLRGEHPAGREGS
Ga0318577_101197032	3300032091	Soil	VDTVTARERLEEMRGQIDKSILVLQGEHPSGRAEVDSPQDPADAGTTLSETD
Ga0310914_103456631	3300033289	Soil	MDTAIARQRLEEMRGELDRSITVLQGEQTAGQGGADSPQDPADVGTNLSECDRVQAVLAA
Ga0318519_107137812	3300033290	Soil	VDTATARERLEEMRGQIDKSILVLQGEHPSGRAEVDSPQDPADAGT

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F061829

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences